BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0532

Length=594
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|57116752|ref|YP_177736.1|  PE-PGRS family protein [Mycobacteri...   996    0.0  
gi|148660301|ref|YP_001281824.1|  PE-PGRS family protein [Mycobac...   989    0.0  
gi|183980964|ref|YP_001849255.1|  PE-PGRS family protein [Mycobac...   144    6e-32
gi|183982114|ref|YP_001850405.1|  PE-PGRS family protein [Mycobac...   140    8e-31
gi|183981229|ref|YP_001849520.1|  PE-PGRS family protein [Mycobac...   140    9e-31
gi|339294428|gb|AEJ46539.1|  hypothetical protein CCDC5079_1349 [...   140    9e-31
gi|340626466|ref|YP_004744918.1|  PE-PGRS family protein [Mycobac...   140    9e-31
gi|339297525|gb|AEJ49635.1|  PE-PGRS family protein [Mycobacteriu...   140    9e-31
gi|31792060|ref|NP_854553.1|  PE-PGRS family protein [Mycobacteri...   139    2e-30
gi|15840285|ref|NP_335322.1|  PE_PGRS family protein [Mycobacteri...   139    2e-30
gi|57116793|ref|YP_177763.1|  PE-PGRS family protein [Mycobacteri...   139    2e-30
gi|253797511|ref|YP_003030512.1|  PE-PGRS family protein [Mycobac...   139    2e-30
gi|289552831|ref|ZP_06442041.1|  LOW QUALITY PROTEIN: predicted p...   139    2e-30
gi|339631517|ref|YP_004723159.1|  PE-PGRS family protein [Mycobac...   137    6e-30
gi|121637380|ref|YP_977603.1|  PE-PGRS family protein [Mycobacter...   137    6e-30
gi|31792644|ref|NP_855137.1|  PE-PGRS family protein [Mycobacteri...   137    8e-30
gi|340625559|ref|YP_004744011.1|  PE-PGRS family protein [Mycobac...   136    1e-29
gi|289568458|ref|ZP_06448685.1|  PE-PGRS family protein [Mycobact...   135    2e-29
gi|31792646|ref|NP_855139.1|  PE-PGRS family protein [Mycobacteri...   135    2e-29
gi|15839928|ref|NP_334965.1|  PE_PGRS family protein [Mycobacteri...   135    2e-29
gi|148821734|ref|YP_001286488.1|  PE-PGRS family protein [Mycobac...   135    2e-29
gi|31791714|ref|NP_854207.1|  hypothetical protein Mb0545 [Mycoba...   135    2e-29
gi|183981460|ref|YP_001849751.1|  PE-PGRS family protein [Mycobac...   134    5e-29
gi|183982664|ref|YP_001850955.1|  PE-PGRS family protein, PE_PGRS...   133    8e-29
gi|289447790|ref|ZP_06437534.1|  PE-PGRS family protein [Mycobact...   132    1e-28
gi|253799501|ref|YP_003032502.1|  hypothetical protein TBMG_02531...   132    2e-28
gi|340627170|ref|YP_004745622.1|  PE-PGRS family protein [Mycobac...   132    2e-28
gi|339632193|ref|YP_004723835.1|  PE-PGRS family protein [Mycobac...   132    3e-28
gi|253798773|ref|YP_003031774.1|  PE-PGRS family protein [Mycobac...   132    3e-28
gi|15841654|ref|NP_336691.1|  PE_PGRS family protein [Mycobacteri...   132    3e-28
gi|297634751|ref|ZP_06952531.1|  PE-PGRS family protein [Mycobact...   132    3e-28
gi|339298700|gb|AEJ50810.1|  PE-PGRS family protein [Mycobacteriu...   131    3e-28
gi|57116908|ref|YP_177832.1|  PE-PGRS family protein [Mycobacteri...   131    3e-28
gi|289447383|ref|ZP_06437127.1|  PE-PGRS family protein [Mycobact...   131    3e-28
gi|183982655|ref|YP_001850946.1|  PE-PGRS family protein [Mycobac...   131    3e-28
gi|31792957|ref|NP_855450.1|  PE-PGRS family protein [Mycobacteri...   131    4e-28
gi|339631822|ref|YP_004723464.1|  PE-PGRS family protein [Mycobac...   131    4e-28
gi|289569833|ref|ZP_06450060.1|  PE-PGRS family protein [Mycobact...   130    5e-28
gi|339631132|ref|YP_004722774.1|  PE-PGRS family protein [Mycobac...   130    9e-28
gi|340627504|ref|YP_004745956.1|  PE-PGRS family protein [Mycobac...   130    9e-28
gi|340626079|ref|YP_004744531.1|  PE-PGRS family protein [Mycobac...   129    2e-27
gi|15840909|ref|NP_335946.1|  PE_PGRS family protein [Mycobacteri...   128    2e-27
gi|148822669|ref|YP_001287423.1|  PE-PGRS family protein [Mycobac...   128    3e-27
gi|148661242|ref|YP_001282765.1|  PE-PGRS family protein [Mycobac...   128    3e-27
gi|121636997|ref|YP_977220.1|  PE-PGRS family protein [Mycobacter...   127    4e-27
gi|183982116|ref|YP_001850407.1|  PE-PGRS family protein [Mycobac...   127    4e-27
gi|31792259|ref|NP_854752.1|  PE-PGRS family protein [Mycobacteri...   127    5e-27
gi|183982972|ref|YP_001851263.1|  PE-PGRS family protein [Mycobac...   127    5e-27
gi|294996042|ref|ZP_06801733.1|  PE-PGRS family protein [Mycobact...   127    6e-27
gi|339297220|gb|AEJ49330.1|  PE-PGRS family protein [Mycobacteriu...   127    6e-27


>gi|57116752|ref|YP_177736.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|7476122|pir||G70545 hypothetical glycine-rich protein Rv0532 - Mycobacterium tuberculosis 
(strain H37RV)
 gi|38490203|emb|CAE55297.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=594

 Score =  996 bits (2576),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 594/594 (100%), Positives = 594/594 (100%), Gaps = 0/594 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ
Sbjct  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
            QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA
Sbjct  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120

Query  121  DGAAGTGQAGGAGGLLYGNGGNGGSGAAGQAGGAGGAAGLIGHGGTGGAVTGVSTTGGPG  180
            DGAAGTGQAGGAGGLLYGNGGNGGSGAAGQAGGAGGAAGLIGHGGTGGAVTGVSTTGGPG
Sbjct  121  DGAAGTGQAGGAGGLLYGNGGNGGSGAAGQAGGAGGAAGLIGHGGTGGAVTGVSTTGGPG  180

Query  181  GHGGDAGLYGFGGAGGAGGFGQSGAAGGAGGAGGWLYGDGGDGGAGDNGGNESGTGVSAV  240
            GHGGDAGLYGFGGAGGAGGFGQSGAAGGAGGAGGWLYGDGGDGGAGDNGGNESGTGVSAV
Sbjct  181  GHGGDAGLYGFGGAGGAGGFGQSGAAGGAGGAGGWLYGDGGDGGAGDNGGNESGTGVSAV  240

Query  241  GGVGGAGGAGGLLFGNGGDGGVGGDGGDGSSTQDSGGDGGAGGAGGAGGWLLGNGGAGGA  300
            GGVGGAGGAGGLLFGNGGDGGVGGDGGDGSSTQDSGGDGGAGGAGGAGGWLLGNGGAGGA
Sbjct  241  GGVGGAGGAGGLLFGNGGDGGVGGDGGDGSSTQDSGGDGGAGGAGGAGGWLLGNGGAGGA  300

Query  301  GGAASIKVATGGLGGDGGDAGLFGFGGDGGWGGRGVDARFGAAGGAAGAGGAGGWLYGDG  360
            GGAASIKVATGGLGGDGGDAGLFGFGGDGGWGGRGVDARFGAAGGAAGAGGAGGWLYGDG
Sbjct  301  GGAASIKVATGGLGGDGGDAGLFGFGGDGGWGGRGVDARFGAAGGAAGAGGAGGWLYGDG  360

Query  361  GAGGVGGVGGAVFSLSSGDGGAGGAGGGGGWLFGNGGDGGAGGGGGGRFGSGSGAGGDGA  420
            GAGGVGGVGGAVFSLSSGDGGAGGAGGGGGWLFGNGGDGGAGGGGGGRFGSGSGAGGDGA
Sbjct  361  GAGGVGGVGGAVFSLSSGDGGAGGAGGGGGWLFGNGGDGGAGGGGGGRFGSGSGAGGDGA  420

Query  421  VGGAGGAGAWFGNGGAGGVGGGGGRGTTAIGGDGGAGGAGGAGGWLYGDGGAGGAGGGGG  480
            VGGAGGAGAWFGNGGAGGVGGGGGRGTTAIGGDGGAGGAGGAGGWLYGDGGAGGAGGGGG
Sbjct  421  VGGAGGAGAWFGNGGAGGVGGGGGRGTTAIGGDGGAGGAGGAGGWLYGDGGAGGAGGGGG  480

Query  481  RGGTGNDGGDGGDGGRGGDAQLLGNGGDGGAGGAGGPAGLALPPGPARPAGAAVPAVRCS  540
            RGGTGNDGGDGGDGGRGGDAQLLGNGGDGGAGGAGGPAGLALPPGPARPAGAAVPAVRCS
Sbjct  481  RGGTGNDGGDGGDGGRGGDAQLLGNGGDGGAGGAGGPAGLALPPGPARPAGAAVPAVRCS  540

Query  541  AAPARPARTADPWLAPIFARSTLRHSHHLGGIAQTGAVADQQGQIAGLGRAGRQ  594
            AAPARPARTADPWLAPIFARSTLRHSHHLGGIAQTGAVADQQGQIAGLGRAGRQ
Sbjct  541  AAPARPARTADPWLAPIFARSTLRHSHHLGGIAQTGAVADQQGQIAGLGRAGRQ  594


>gi|148660301|ref|YP_001281824.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148504453|gb|ABQ72262.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=594

 Score =  989 bits (2557),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 592/594 (99%), Positives = 592/594 (99%), Gaps = 0/594 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ
Sbjct  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
            QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA
Sbjct  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120

Query  121  DGAAGTGQAGGAGGLLYGNGGNGGSGAAGQAGGAGGAAGLIGHGGTGGAVTGVSTTGGPG  180
            DGAAGTGQAGGAGGLLYGNGGNGGSGAAGQAGGAGGAAGLIGHGGTGGAVTGVSTTGGPG
Sbjct  121  DGAAGTGQAGGAGGLLYGNGGNGGSGAAGQAGGAGGAAGLIGHGGTGGAVTGVSTTGGPG  180

Query  181  GHGGDAGLYGFGGAGGAGGFGQSGAAGGAGGAGGWLYGDGGDGGAGDNGGNESGTGVSAV  240
            GHGGDAGLYGFGGAGGAGGFGQSGAAGGAGGAGGWLYGDGGDGGAG NGGNESGTGVS V
Sbjct  181  GHGGDAGLYGFGGAGGAGGFGQSGAAGGAGGAGGWLYGDGGDGGAGGNGGNESGTGVSGV  240

Query  241  GGVGGAGGAGGLLFGNGGDGGVGGDGGDGSSTQDSGGDGGAGGAGGAGGWLLGNGGAGGA  300
            GGVGGAGGAGGLLFGNGGDGGVGGDGGDGSSTQDSGGDGGAGGAGGAGGWLLGNGGAGGA
Sbjct  241  GGVGGAGGAGGLLFGNGGDGGVGGDGGDGSSTQDSGGDGGAGGAGGAGGWLLGNGGAGGA  300

Query  301  GGAASIKVATGGLGGDGGDAGLFGFGGDGGWGGRGVDARFGAAGGAAGAGGAGGWLYGDG  360
            GGAASIKVATGGLGGDGGDAGLFGFGGDGGWGGRGVDARFGAAGGAAGAGGAGGWLYGDG
Sbjct  301  GGAASIKVATGGLGGDGGDAGLFGFGGDGGWGGRGVDARFGAAGGAAGAGGAGGWLYGDG  360

Query  361  GAGGVGGVGGAVFSLSSGDGGAGGAGGGGGWLFGNGGDGGAGGGGGGRFGSGSGAGGDGA  420
            GAGGVGGVGGAVFSLSSGDGGAGGAGGGGGWLFGNGGDGGAGGGGGGRFGSGSGAGGDGA
Sbjct  361  GAGGVGGVGGAVFSLSSGDGGAGGAGGGGGWLFGNGGDGGAGGGGGGRFGSGSGAGGDGA  420

Query  421  VGGAGGAGAWFGNGGAGGVGGGGGRGTTAIGGDGGAGGAGGAGGWLYGDGGAGGAGGGGG  480
            VGGAGGAGAWFGNGGAGGVGGGGGRGTTAIGGDGGAGGAGGAGGWLYGDGGAGGAGGGGG
Sbjct  421  VGGAGGAGAWFGNGGAGGVGGGGGRGTTAIGGDGGAGGAGGAGGWLYGDGGAGGAGGGGG  480

Query  481  RGGTGNDGGDGGDGGRGGDAQLLGNGGDGGAGGAGGPAGLALPPGPARPAGAAVPAVRCS  540
            RGGTGNDGGDGGDGGRGGDAQLLGNGGDGGAGGAGGPAGLALPPGPARPAGAAVPAVRCS
Sbjct  481  RGGTGNDGGDGGDGGRGGDAQLLGNGGDGGAGGAGGPAGLALPPGPARPAGAAVPAVRCS  540

Query  541  AAPARPARTADPWLAPIFARSTLRHSHHLGGIAQTGAVADQQGQIAGLGRAGRQ  594
            AAPARPARTADPWLAPIFARSTLRHSHHLGGIAQTGAVADQQGQIAGLGRAGRQ
Sbjct  541  AAPARPARTADPWLAPIFARSTLRHSHHLGGIAQTGAVADQQGQIAGLGRAGRQ  594


>gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1425

 Score =  144 bits (362),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 102/157 (65%), Positives = 118/157 (76%), Gaps = 0/157 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS  +V P+++ AAAADLA IG+AI   + AA A T  LL A ADEVSAA+A++F ++A 
Sbjct  1    MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
             YQA+ A AA FHD FV+AL+  A  YA  E ANVEQ LL  INAPT AL GRPLIGNGA
Sbjct  61   AYQAIGAQAATFHDGFVQALSRAASRYAATEVANVEQNLLGLINAPTQALFGRPLIGNGA  120

Query  121  DGAAGTGQAGGAGGLLYGNGGNGGSGAAGQAGGAGGA  157
            DGAAGTGQ G AGGLL+GNGG GGSGA GQ+GG GGA
Sbjct  121  DGAAGTGQTGQAGGLLWGNGGAGGSGAPGQSGGTGGA  157


>gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1397

 Score =  140 bits (352),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 77/121 (64%), Positives = 95/121 (79%), Gaps = 0/121 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS + VTPE+V AAA+DL+GI SAI  AN+ A A T  +L A ADEVSAA+AA+F ++AQ
Sbjct  1    MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
            QYQA+SA  AAFHD+FV++L  GAG+Y  AEAAN EQ LL  +NAPT AL GRPLIG+GA
Sbjct  61   QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAEQGLLGLVNAPTQALFGRPLIGDGA  120

Query  121  D  121
            +
Sbjct  121  N  121


>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946

 Score =  140 bits (352),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 78/123 (64%), Positives = 90/123 (74%), Gaps = 2/123 (1%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            M+ +LV PE+V AAA+DLA IGSAI  AN A  APT  LLAAG DEVS A+A++FS +A 
Sbjct  1    MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAE--AANVEQQLLNAINAPTLALLGRPLIGN  118
             YQ+L A   AFHDQFV AL AG G Y+ AE  AA   Q LLN +NAPT ALLGRPLIG+
Sbjct  61   DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD  120

Query  119  GAD  121
            GAD
Sbjct  121  GAD  123


>gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis 
CCDC5079]
Length=742

 Score =  140 bits (352),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 72/122 (60%), Positives = 93/122 (77%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++VTPE VAAAA+D+A IGS+IG AN+AA   T ++LAAGADEVSAA+A +F S+A+
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+F + L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  115  LI  116
            LI
Sbjct  122  LI  123


>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006

 Score =  140 bits (352),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 73/122 (60%), Positives = 93/122 (77%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++VTPELVAAAA+D+A IGS  GAAN+ A   T ++LAAGADEVSAA+A +F S+A+
Sbjct  1    MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+FV+ L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  61   EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  115  LI  116
            LI
Sbjct  121  LI  122


>gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=650

 Score =  140 bits (352),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 83/125 (67%), Positives = 97/125 (78%), Gaps = 2/125 (1%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS +L TPE+VAAAA +LA IGS + AANAAA APT  +LAAGADEVSAAVA++FS +AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVE--QQLLNAINAPTLALLGRPLIGN  118
             YQ L   AAAFH++F++AL+  AGAY  AEAAN    QQ LN INAPT  LLGRPLIGN
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN  120

Query  119  GADGA  123
            G +GA
Sbjct  121  GTNGA  125


>gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31617647|emb|CAD93757.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=608

 Score =  139 bits (350),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 83/125 (67%), Positives = 97/125 (78%), Gaps = 2/125 (1%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS +L TPE+VAAAA +LA IGS + AANAAA APT  +LAAGADEVSAAVA++FS +AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVE--QQLLNAINAPTLALLGRPLIGN  118
             YQ L   AAAFH++F++AL+  AGAY  AEAAN    QQ LN INAPT  LLGRPLIGN
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN  120

Query  119  GADGA  123
            G +GA
Sbjct  121  GTNGA  125


>gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|121636795|ref|YP_977018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148822080|ref|YP_001286834.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 18 more sequence titles
 
gi|224989266|ref|YP_002643953.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800106|ref|YP_003033107.1| hypothetical protein TBMG_03118 [Mycobacterium tuberculosis KZN 
1435]
 gi|289555347|ref|ZP_06444557.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|294996352|ref|ZP_06802043.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
 gi|297633389|ref|ZP_06951169.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297730374|ref|ZP_06959492.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
 gi|339630937|ref|YP_004722579.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|13880446|gb|AAK45136.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|121492442|emb|CAL70910.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148720607|gb|ABR05232.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|224772379|dbj|BAH25185.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321609|gb|ACT26212.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
 gi|289439979|gb|EFD22472.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|328459844|gb|AEB05267.1| hypothetical protein TBSG_03138 [Mycobacterium tuberculosis KZN 
4207]
 gi|339293884|gb|AEJ45995.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339330293|emb|CCC25953.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|341600811|emb|CCC63482.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344218699|gb|AEM99329.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=609

 Score =  139 bits (350),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 83/125 (67%), Positives = 97/125 (78%), Gaps = 2/125 (1%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS +L TPE+VAAAA +LA IGS + AANAAA APT  +LAAGADEVSAAVA++FS +AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVE--QQLLNAINAPTLALLGRPLIGN  118
             YQ L   AAAFH++F++AL+  AGAY  AEAAN    QQ LN INAPT  LLGRPLIGN
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN  120

Query  119  GADGA  123
            G +GA
Sbjct  121  GTNGA  125


>gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|148660649|ref|YP_001282172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|7476127|pir||H70816 hypothetical glycine-rich protein Rv0872c - Mycobacterium tuberculosis 
(strain H37RV)
 gi|38490245|emb|CAE55332.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148504801|gb|ABQ72610.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=606

 Score =  139 bits (350),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 83/125 (67%), Positives = 97/125 (78%), Gaps = 2/125 (1%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS +L TPE+VAAAA +LA IGS + AANAAA APT  +LAAGADEVSAAVA++FS +AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVE--QQLLNAINAPTLALLGRPLIGN  118
             YQ L   AAAFH++F++AL+  AGAY  AEAAN    QQ LN INAPT  LLGRPLIGN
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN  120

Query  119  GADGA  123
            G +GA
Sbjct  121  GTNGA  125


>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN 
4207]
 gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303

 Score =  139 bits (349),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 75/123 (61%), Positives = 91/123 (74%), Gaps = 1/123 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++ TPE++  AA DLA IGS I AAN AA A    +L A ADEVS AVAA+F ++AQ
Sbjct  1    MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ  59

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
            +YQ +SA  A FHD+FV+ L+A A +Y  AEA NVEQ LL A+NAPT AL GRPLIGNGA
Sbjct  60   EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA  119

Query  121  DGA  123
            DG+
Sbjct  120  DGS  122


>gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
KZN 605]
 gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
KZN 605]
Length=998

 Score =  139 bits (349),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 75/123 (61%), Positives = 91/123 (74%), Gaps = 1/123 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++ TPE++  AA DLA IGS I AAN AA A    +L A ADEVS AVAA+F ++AQ
Sbjct  1    MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ  59

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
            +YQ +SA  A FHD+FV+ L+A A +Y  AEA NVEQ LL A+NAPT AL GRPLIGNGA
Sbjct  60   EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA  119

Query  121  DGA  123
            DG+
Sbjct  120  DGS  122


>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389

 Score =  137 bits (345),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 71/122 (59%), Positives = 91/122 (75%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++V PE VAAAA D+A IGS+IG AN+AA   T ++LAAGADEVSAA+A +F S+A+
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+F + L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  115  LI  116
            LI
Sbjct  121  LI  122


>gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1399

 Score =  137 bits (344),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 71/122 (59%), Positives = 91/122 (75%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++V PE VAAAA D+A IGS+IG AN+AA   T ++LAAGADEVSAA+A +F S+A+
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+F + L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  115  LI  116
            LI
Sbjct  121  LI  122


>gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1408

 Score =  137 bits (344),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 71/122 (59%), Positives = 91/122 (75%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++V PE VAAAA D+A IGS+IG AN+AA   T ++LAAGADEVSAA+A +F S+A+
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+F + L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  115  LI  116
            LI
Sbjct  121  LI  122


>gi|340625559|ref|YP_004744011.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340003749|emb|CCC42875.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=581

 Score =  136 bits (342),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 111/116 (96%), Positives = 111/116 (96%), Gaps = 0/116 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ
Sbjct  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116
            QYQ  SAAAAAFHDQF R L AGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI
Sbjct  61   QYQTASAAAAAFHDQFTRTLLAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116


>gi|289568458|ref|ZP_06448685.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
 gi|289542212|gb|EFD45860.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
Length=363

 Score =  135 bits (341),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 116/116 (100%), Positives = 116/116 (100%), Gaps = 0/116 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ
Sbjct  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116
            QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI
Sbjct  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116


>gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31618236|emb|CAD96154.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=795

 Score =  135 bits (341),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 71/122 (59%), Positives = 91/122 (75%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++V PE VAAAA D+A IGS+IG AN+AA   T ++LAAGADEVSAA+A +F S+A+
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+F + L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  115  LI  116
            LI
Sbjct  121  LI  122


>gi|15839928|ref|NP_334965.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13880066|gb|AAK44779.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=622

 Score =  135 bits (340),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 116/116 (100%), Positives = 116/116 (100%), Gaps = 0/116 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ
Sbjct  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116
            QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI
Sbjct  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116


>gi|148821734|ref|YP_001286488.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253797464|ref|YP_003030465.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|297633022|ref|ZP_06950802.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
 gi|148720261|gb|ABR04886.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253318967|gb|ACT23570.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328457250|gb|AEB02673.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
 gi|344218353|gb|AEM98983.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=622

 Score =  135 bits (340),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 116/116 (100%), Positives = 116/116 (100%), Gaps = 0/116 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ
Sbjct  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116
            QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI
Sbjct  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116


>gi|31791714|ref|NP_854207.1| hypothetical protein Mb0545 [Mycobacterium bovis AF2122/97]
 gi|121636450|ref|YP_976673.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224988922|ref|YP_002643609.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31617300|emb|CAD93407.1| PE-PGRS FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
 gi|121492097|emb|CAL70560.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG 
str. Pasteur 1173P2]
 gi|224772035|dbj|BAH24841.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341600466|emb|CCC63136.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG 
str. Moreau RDJ]
Length=581

 Score =  135 bits (339),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 116/116 (100%), Positives = 116/116 (100%), Gaps = 0/116 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ
Sbjct  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116
            QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI
Sbjct  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116


>gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1483

 Score =  134 bits (337),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 76/121 (63%), Positives = 94/121 (78%), Gaps = 0/121 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS + V PE+VAAA  DLAGIGS+I AANAAA A T  ++ A ADEVSAA+AA+F S+A+
Sbjct  1    MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
            +YQA+SA +AAFH++ V+ L +GA AY G E AN +Q LLNA+N PT A LGRPLIGNG 
Sbjct  61   EYQAISAQSAAFHERLVQTLRSGASAYLGTELANAQQNLLNAVNGPTQAWLGRPLIGNGT  120

Query  121  D  121
            D
Sbjct  121  D  121


>gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
 gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
Length=2118

 Score =  133 bits (335),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 76/130 (59%), Positives = 93/130 (72%), Gaps = 9/130 (6%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS + V+PELVA AA+DLA IGS++GAANAAA  PT  +L+A ADEVS A+A +F ++A 
Sbjct  1    MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN---------VEQQLLNAINAPTLALL  111
            +YQ+LSA  AAFH+QFV+ L +GAG Y   EA N          EQ  LNAINAPT + L
Sbjct  61   EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL  120

Query  112  GRPLIGNGAD  121
            GRPLIGNG D
Sbjct  121  GRPLIGNGVD  130


>gi|289447790|ref|ZP_06437534.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289420748|gb|EFD17949.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=621

 Score =  132 bits (333),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 78/105 (75%), Positives = 89/105 (85%), Gaps = 0/105 (0%)

Query  17   DLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQALSAAAAAFHDQF  76
            DLA IGS+I AA+AAA  PTM +LAAGADEVS A++A+F S+AQ YQ LSA  AA+H+QF
Sbjct  17   DLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQF  76

Query  77   VRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGAD  121
            VRAL AGAG+YA AEAANV+Q LLNAINAPT  LLGRPLIGNGAD
Sbjct  77   VRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGAD  121


>gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 
1435]
 gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
 gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 
4207]
Length=1408

 Score =  132 bits (332),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 74/122 (61%), Positives = 94/122 (78%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++VTPE VAAAA+D+A IGS+IGAANAAA   T ++LAAGADEVSAA+A +F S+A+
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+F + L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  115  LI  116
            LI
Sbjct  122  LI  123


>gi|340627170|ref|YP_004745622.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340005360|emb|CCC44518.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=526

 Score =  132 bits (331),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 78/105 (75%), Positives = 89/105 (85%), Gaps = 0/105 (0%)

Query  17   DLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQALSAAAAAFHDQF  76
            DLA IGS+I AA+AAA  PTM +LAAGADEVS A++A+F S+AQ YQ LSA  AA+H+QF
Sbjct  17   DLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQF  76

Query  77   VRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGAD  121
            VRAL AGAG+YA AEAANV+Q LLNAINAPT  LLGRPLIGNGAD
Sbjct  77   VRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGAD  121


>gi|339632193|ref|YP_004723835.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339331549|emb|CCC27245.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=526

 Score =  132 bits (331),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 78/105 (75%), Positives = 89/105 (85%), Gaps = 0/105 (0%)

Query  17   DLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQALSAAAAAFHDQF  76
            DLA IGS+I AA+AAA  PTM +LAAGADEVS A++A+F S+AQ YQ LSA  AA+H+QF
Sbjct  17   DLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQF  76

Query  77   VRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGAD  121
            VRAL AGAG+YA AEAANV+Q LLNAINAPT  LLGRPLIGNGAD
Sbjct  77   VRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGAD  121


>gi|253798773|ref|YP_003031774.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|253320276|gb|ACT24879.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328458536|gb|AEB03959.1| hypothetical protein TBSG_01830 [Mycobacterium tuberculosis KZN 
4207]
Length=532

 Score =  132 bits (331),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 78/105 (75%), Positives = 89/105 (85%), Gaps = 0/105 (0%)

Query  17   DLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQALSAAAAAFHDQF  76
            DLA IGS+I AA+AAA  PTM +LAAGADEVS A++A+F S+AQ YQ LSA  AA+H+QF
Sbjct  17   DLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQF  76

Query  77   VRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGAD  121
            VRAL AGAG+YA AEAANV+Q LLNAINAPT  LLGRPLIGNGAD
Sbjct  77   VRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGAD  121


>gi|15841654|ref|NP_336691.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|57116953|ref|YP_177865.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|148661978|ref|YP_001283501.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 9 more sequence titles
 
gi|148823371|ref|YP_001288125.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|294993548|ref|ZP_06799239.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
 gi|7476142|pir||F70580 hypothetical glycine-rich protein Rv2162c - Mycobacterium tuberculosis 
(strain H37RV)
 gi|13881907|gb|AAK46505.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|38490318|emb|CAE55462.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148506130|gb|ABQ73939.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148721898|gb|ABR06523.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|339295079|gb|AEJ47190.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
 gi|344219986|gb|AEN00617.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=532

 Score =  132 bits (331),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 78/105 (75%), Positives = 89/105 (85%), Gaps = 0/105 (0%)

Query  17   DLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQALSAAAAAFHDQF  76
            DLA IGS+I AA+AAA  PTM +LAAGADEVS A++A+F S+AQ YQ LSA  AA+H+QF
Sbjct  17   DLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQF  76

Query  77   VRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGAD  121
            VRAL AGAG+YA AEAANV+Q LLNAINAPT  LLGRPLIGNGAD
Sbjct  77   VRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGAD  121


>gi|297634751|ref|ZP_06952531.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=532

 Score =  132 bits (331),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 78/105 (75%), Positives = 89/105 (85%), Gaps = 0/105 (0%)

Query  17   DLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQALSAAAAAFHDQF  76
            DLA IGS+I AA+AAA  PTM +LAAGADEVS A++A+F S+AQ YQ LSA  AA+H+QF
Sbjct  17   DLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQF  76

Query  77   VRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGAD  121
            VRAL AGAG+YA AEAANV+Q LLNAINAPT  LLGRPLIGNGAD
Sbjct  77   VRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGAD  121


>gi|339298700|gb|AEJ50810.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=532

 Score =  131 bits (330),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 78/106 (74%), Positives = 89/106 (84%), Gaps = 0/106 (0%)

Query  16   ADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQALSAAAAAFHDQ  75
             DLA IGS+I AA+AAA  PTM +LAAGADEVS A++A+F S+AQ YQ LSA  AA+H+Q
Sbjct  16   TDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQ  75

Query  76   FVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGAD  121
            FVRAL AGAG+YA AEAANV+Q LLNAINAPT  LLGRPLIGNGAD
Sbjct  76   FVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGAD  121


>gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|148661576|ref|YP_001283099.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148822983|ref|YP_001287737.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 19 more sequence titles
 
gi|253799191|ref|YP_003032192.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289554459|ref|ZP_06443669.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|289757871|ref|ZP_06517249.1| predicted protein [Mycobacterium tuberculosis T85]
 gi|294996679|ref|ZP_06802370.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
 gi|297634326|ref|ZP_06952106.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297731315|ref|ZP_06960433.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
 gi|313658646|ref|ZP_07815526.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
 gi|7476137|pir||A70989 hypothetical glycine-rich protein Rv1768 - Mycobacterium tuberculosis 
(strain H37RV)
 gi|38684057|emb|CAE55419.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148505728|gb|ABQ73537.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148721510|gb|ABR06135.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253320694|gb|ACT25297.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289439091|gb|EFD21584.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|289713435|gb|EFD77447.1| predicted protein [Mycobacterium tuberculosis T85]
 gi|326903376|gb|EGE50309.1| PE-PGRS family protein [Mycobacterium tuberculosis W-148]
 gi|328458946|gb|AEB04369.1| hypothetical protein TBSG_02240 [Mycobacterium tuberculosis KZN 
4207]
 gi|339294710|gb|AEJ46821.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339298339|gb|AEJ50449.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
 gi|344219591|gb|AEN00222.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=618

 Score =  131 bits (330),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 91/125 (73%), Positives = 103/125 (83%), Gaps = 3/125 (2%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS L+V PELVAAAA DLA IGS+I AANAAA APT AL+AAG DEVSAA+AA+F ++A+
Sbjct  1    MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN---VEQQLLNAINAPTLALLGRPLIG  117
             YQALSA AA FH+QFVRALAAG  +YA AEAA    V+Q LLN INAPT ALLGRPLIG
Sbjct  61   AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG  120

Query  118  NGADG  122
            NGA+G
Sbjct  121  NGANG  125


>gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289420341|gb|EFD17542.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=592

 Score =  131 bits (330),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 91/125 (73%), Positives = 103/125 (83%), Gaps = 3/125 (2%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS L+V PELVAAAA DLA IGS+I AANAAA APT AL+AAG DEVSAA+AA+F ++A+
Sbjct  1    MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN---VEQQLLNAINAPTLALLGRPLIG  117
             YQALSA AA FH+QFVRALAAG  +YA AEAA    V+Q LLN INAPT ALLGRPLIG
Sbjct  61   AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG  120

Query  118  NGADG  122
            NGA+G
Sbjct  121  NGANG  125


>gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183175981|gb|ACC41091.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=625

 Score =  131 bits (330),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 79/109 (73%), Positives = 91/109 (84%), Gaps = 2/109 (1%)

Query  17   DLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQALSAAAAAFHDQF  76
            DLA +GS+I AANAAA APTM++LAAGADEVSA VAA+F ++AQ YQ+LSA AA FH+QF
Sbjct  17   DLASVGSSISAANAAAAAPTMSVLAAGADEVSAVVAALFDAHAQAYQSLSAQAALFHEQF  76

Query  77   VRALAAGAGAYAGAEAANVE--QQLLNAINAPTLALLGRPLIGNGADGA  123
            V+AL AGAG+YA AEAA+V   Q  LN INAPT AL GRPLIGNGADGA
Sbjct  77   VQALNAGAGSYALAEAASVSPLQDALNLINAPTQALFGRPLIGNGADGA  125


>gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|224990154|ref|YP_002644841.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31618548|emb|CAD94500.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|224773267|dbj|BAH26073.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341601697|emb|CCC64370.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis BCG str. Moreau RDJ]
Length=624

 Score =  131 bits (329),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 91/125 (73%), Positives = 103/125 (83%), Gaps = 3/125 (2%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS L+V PELVAAAA DLA IGS+I AANAAA APT AL+AAG DEVSAA+AA+F ++A+
Sbjct  1    MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN---VEQQLLNAINAPTLALLGRPLIG  117
             YQALSA AA FH+QFVRALAAG  +YA AEAA    V+Q LLN INAPT ALLGRPLIG
Sbjct  61   AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG  120

Query  118  NGADG  122
            NGA+G
Sbjct  121  NGANG  125


>gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339331178|emb|CCC26860.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=632

 Score =  131 bits (329),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 91/125 (73%), Positives = 103/125 (83%), Gaps = 3/125 (2%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS L+V PELVAAAA DLA IGS+I AANAAA APT AL+AAG DEVSAA+AA+F ++A+
Sbjct  1    MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN---VEQQLLNAINAPTLALLGRPLIG  117
             YQALSA AA FH+QFVRALAAG  +YA AEAA    V+Q LLN INAPT ALLGRPLIG
Sbjct  61   AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG  120

Query  118  NGADG  122
            NGA+G
Sbjct  121  NGANG  125


>gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
 gi|340626780|ref|YP_004745232.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|289543587|gb|EFD47235.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
 gi|340004970|emb|CCC44118.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=624

 Score =  130 bits (328),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 91/125 (73%), Positives = 103/125 (83%), Gaps = 3/125 (2%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS L+V PELVAAAA DLA IGS+I AANAAA APT AL+AAG DEVSAA+AA+F ++A+
Sbjct  1    MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN---VEQQLLNAINAPTLALLGRPLIG  117
             YQALSA AA FH+QFVRALAAG  +YA AEAA    V+Q LLN INAPT ALLGRPLIG
Sbjct  61   AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG  120

Query  118  NGADG  122
            NGA+G
Sbjct  121  NGANG  125


>gi|339631132|ref|YP_004722774.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339330488|emb|CCC26153.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=772

 Score =  130 bits (326),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 76/124 (62%), Positives = 93/124 (75%), Gaps = 0/124 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++  P+++++AA DLA IGS+I A+  AA A T  LL A ADEVSA +AA+FS + +
Sbjct  7    MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE  66

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
             YQA++   AAFHDQF  AL + AGAYA AEA NVEQQ+L  INAPT ALLGRPLIGNGA
Sbjct  67   GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA  126

Query  121  DGAA  124
            DG A
Sbjct  127  DGTA  130


>gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1660

 Score =  130 bits (326),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 74/124 (60%), Positives = 91/124 (74%), Gaps = 2/124 (1%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++ TPE++A AA DLA IGS + AA+A A  PT  ++AAGADEVSA +AA+FS++AQ
Sbjct  1    MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN--VEQQLLNAINAPTLALLGRPLIGN  118
            +YQALSA AAAFHDQFV  L A A  Y   E AN    + +L A+NAPT  LLGRPLIG+
Sbjct  61   EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAVLGAVNAPTQTLLGRPLIGD  120

Query  119  GADG  122
            GA G
Sbjct  121  GAHG  124


>gi|340626079|ref|YP_004744531.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004269|emb|CCC43410.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=767

 Score =  129 bits (323),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 75/124 (61%), Positives = 93/124 (75%), Gaps = 0/124 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++  P+++++AA DLA IGS+I A+  AA A T  LL A ADEVSA +AA+FS + +
Sbjct  1    MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
             YQA++   AAFHDQF  AL + AGAYA AEA NVEQQ+L  INAPT ALLGRPL+GNGA
Sbjct  61   GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLVGNGA  120

Query  121  DGAA  124
            DG A
Sbjct  121  DGTA  124


>gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1408

 Score =  128 bits (322),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 73/122 (60%), Positives = 92/122 (76%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++V PE VAAAA D+A IGS+IGAANAAA   T ++LAAGADEVSAA+A +F S+A+
Sbjct  2    MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+F + L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  115  LI  116
            LI
Sbjct  122  LI  123


>gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1407

 Score =  128 bits (321),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 73/122 (60%), Positives = 92/122 (76%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++V PE VAAAA D+A IGS+IGAANAAA   T ++LAAGADEVSAA+A +F S+A+
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+F + L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  115  LI  116
            LI
Sbjct  121  LI  122


>gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1398

 Score =  128 bits (321),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 73/122 (60%), Positives = 92/122 (76%), Gaps = 6/122 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++V PE VAAAA D+A IGS+IGAANAAA   T ++LAAGADEVSAA+A +F S+A+
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
            +YQA+S   AAFHD+F + L+A  G+Y  AEA N      +E  +LNA+NAPT ALLGRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  115  LI  116
            LI
Sbjct  121  LI  122


>gi|121636997|ref|YP_977220.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|121492644|emb|CAL71113.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|341601013|emb|CCC63685.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=730

 Score =  127 bits (320),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 75/124 (61%), Positives = 92/124 (75%), Gaps = 0/124 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++  P+++++AA DLA IGS+I A+  AA A T  LL A ADEVSA +AA+FS + +
Sbjct  1    MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
             YQA++   AAFHDQF  AL + AGAYA AEA NVEQQ+L  INAPT AL GRPLIGNGA
Sbjct  61   GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA  120

Query  121  DGAA  124
            DG A
Sbjct  121  DGTA  124


>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386

 Score =  127 bits (320),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 67/118 (57%), Positives = 82/118 (70%), Gaps = 6/118 (5%)

Query  6    VTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQAL  65
            V PE+VA AA+DL  +GS I AAN AA   T  +LAAGADEVSA +AA+F ++A +YQA+
Sbjct  6    VAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHALEYQAI  65

Query  66   SAAAAAFHDQFVRALAAGAGAYAGAEAANV------EQQLLNAINAPTLALLGRPLIG  117
            S   + FH+QFV+ L  G GAY+ AE  NV      EQ LLN +NAPT AL GRPLIG
Sbjct  66   STQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRPLIG  123


>gi|31792259|ref|NP_854752.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31617847|emb|CAD93957.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=763

 Score =  127 bits (319),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 75/124 (61%), Positives = 92/124 (75%), Gaps = 0/124 (0%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            MS ++  P+++++AA DLA IGS+I A+  AA A T  LL A ADEVSA +AA+FS + +
Sbjct  1    MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLIGNGA  120
             YQA++   AAFHDQF  AL + AGAYA AEA NVEQQ+L  INAPT AL GRPLIGNGA
Sbjct  61   GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA  120

Query  121  DGAA  124
            DG A
Sbjct  121  DGTA  124


>gi|183982972|ref|YP_001851263.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183176298|gb|ACC41408.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=609

 Score =  127 bits (319),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 91/155 (59%), Positives = 112/155 (73%), Gaps = 7/155 (4%)

Query  1    MSNLLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQ  60
            M+ L+  P+ VA AA +LA IGS+I  A+AAA APT  L AAGADE+SAA+A +F ++AQ
Sbjct  1    MTYLVTVPQTVATAAGNLAAIGSSITDASAAAAAPTTELAAAGADEISAAIAQLFGTHAQ  60

Query  61   QYQALSAAAAAFHDQFVRALAAGAGAYAGAEAAN------VEQQLLNAINAPTLALLGRP  114
             YQ +SA A AFHDQF R+L+A +G+YA AEA N      V+Q LL  +NAPT ALLGRP
Sbjct  61   IYQRISAQAMAFHDQFARSLSAASGSYANAEATNTLTLQSVQQDLLGLVNAPTQALLGRP  120

Query  115  LIGNGADGAAGTGQAGGAGGLLYGNGGNGGSGAAG  149
            LIGNGA+G A     G AGGLLYGNGG+G S  +G
Sbjct  121  LIGNGANGTAADPN-GEAGGLLYGNGGDGYSFTSG  154


>gi|294996042|ref|ZP_06801733.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=619

 Score =  127 bits (319),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 112/113 (99%), Positives = 113/113 (100%), Gaps = 0/113 (0%)

Query  4    LLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQ  63
            +LVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQ
Sbjct  1    MLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQ  60

Query  64   ALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116
            ALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI
Sbjct  61   ALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  113


>gi|339297220|gb|AEJ49330.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=619

 Score =  127 bits (319),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 112/113 (99%), Positives = 113/113 (100%), Gaps = 0/113 (0%)

Query  4    LLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQ  63
            +LVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQ
Sbjct  1    MLVTPELVAAAAADLAGIGSAIGAANAAAGAPTMALLAAGADEVSAAVAAVFSSYAQQYQ  60

Query  64   ALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  116
            ALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI
Sbjct  61   ALSAAAAAFHDQFVRALAAGAGAYAGAEAANVEQQLLNAINAPTLALLGRPLI  113



Lambda     K      H
   0.311    0.141    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1352198646822




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40