BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0540
Length=220
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607680|ref|NP_215054.1| hypothetical protein Rv0540 [Mycoba... 424 4e-117
gi|254363500|ref|ZP_04979546.1| conserved hypothetical protein [... 423 8e-117
gi|289552793|ref|ZP_06442003.1| conserved hypothetical protein [... 418 2e-115
gi|15839936|ref|NP_334973.1| hypothetical protein MT0565 [Mycoba... 407 7e-112
gi|167968388|ref|ZP_02550665.1| hypothetical protein MtubH3_1027... 400 6e-110
gi|240169219|ref|ZP_04747878.1| hypothetical protein MkanA1_0789... 302 3e-80
gi|342858951|ref|ZP_08715605.1| hypothetical protein MCOL_08743 ... 282 3e-74
gi|183980907|ref|YP_001849198.1| hypothetical protein MMAR_0886 ... 276 1e-72
gi|118616443|ref|YP_904775.1| hypothetical protein MUL_0639 [Myc... 276 1e-72
gi|296168276|ref|ZP_06850225.1| conserved hypothetical protein [... 275 3e-72
gi|41410134|ref|NP_962970.1| hypothetical protein MAP4036 [Mycob... 247 9e-64
gi|289568463|ref|ZP_06448690.1| hypothetical protein TBJG_04087 ... 244 6e-63
gi|118462856|ref|YP_883733.1| hypothetical protein MAV_4604 [Myc... 244 7e-63
gi|108797691|ref|YP_637888.1| hypothetical protein Mmcs_0711 [My... 233 2e-59
gi|126433316|ref|YP_001069007.1| hypothetical protein Mjls_0705 ... 232 3e-59
gi|118470896|ref|YP_885398.1| hypothetical protein MSMEG_0996 [M... 230 9e-59
gi|289749039|ref|ZP_06508417.1| conserved hypothetical protein [... 227 7e-58
gi|120401902|ref|YP_951731.1| hypothetical protein Mvan_0887 [My... 210 1e-52
gi|111021235|ref|YP_704207.1| hypothetical protein RHA1_ro04258 ... 172 4e-41
gi|226363581|ref|YP_002781363.1| hypothetical protein ROP_41710 ... 168 5e-40
gi|254777037|ref|ZP_05218553.1| hypothetical protein MaviaA2_205... 168 6e-40
gi|300790133|ref|YP_003770424.1| hypothetical protein AMED_8325 ... 164 8e-39
gi|325003648|ref|ZP_08124760.1| hypothetical protein PseP1_33001... 154 8e-36
gi|134099879|ref|YP_001105540.1| hypothetical protein SACE_3340 ... 154 1e-35
gi|302530367|ref|ZP_07282709.1| conserved hypothetical protein [... 150 1e-34
gi|302868409|ref|YP_003837046.1| hypothetical protein Micau_3946... 132 5e-29
gi|331699678|ref|YP_004335917.1| hypothetical protein Psed_5942 ... 123 2e-26
gi|238061623|ref|ZP_04606332.1| hypothetical protein MCAG_02589 ... 122 4e-26
gi|254822008|ref|ZP_05227009.1| hypothetical protein MintA_18892... 118 5e-25
gi|311744419|ref|ZP_07718220.1| conserved hypothetical protein [... 115 5e-24
gi|256397384|ref|YP_003118948.1| hypothetical protein Caci_8284 ... 100 1e-19
gi|318058511|ref|ZP_07977234.1| hypothetical protein SSA3_11245 ... 99.4 4e-19
gi|159038327|ref|YP_001537580.1| hypothetical protein Sare_2754 ... 95.9 3e-18
gi|312197960|ref|YP_004018021.1| hypothetical protein FraEuI1c_4... 95.5 5e-18
gi|297560681|ref|YP_003679655.1| hypothetical protein Ndas_1720 ... 95.5 5e-18
gi|148273521|ref|YP_001223082.1| hypothetical protein CMM_2337 [... 95.1 6e-18
gi|318062673|ref|ZP_07981394.1| hypothetical protein SSA3_32379 ... 94.4 1e-17
gi|29831115|ref|NP_825749.1| hypothetical protein SAV_4572 [Stre... 94.0 1e-17
gi|333026938|ref|ZP_08455002.1| hypothetical protein STTU_4442 [... 91.7 6e-17
gi|326328831|ref|ZP_08195167.1| hypothetical protein NBCG_00270 ... 91.3 8e-17
gi|290955000|ref|YP_003486182.1| hypothetical protein SCAB_4061 ... 90.5 1e-16
gi|297155363|gb|ADI05075.1| hypothetical protein SBI_01954 [Stre... 90.1 2e-16
gi|163839441|ref|YP_001623846.1| hypothetical protein RSal33209_... 86.7 2e-15
gi|86739693|ref|YP_480093.1| hypothetical protein Francci3_0980 ... 85.9 4e-15
gi|170782840|ref|YP_001711174.1| hypothetical protein CMS_2517 [... 85.9 4e-15
gi|182440496|ref|YP_001828215.1| hypothetical protein SGR_6703 [... 85.9 4e-15
gi|326781166|ref|ZP_08240431.1| Protein of unknown function DUF2... 85.9 4e-15
gi|318080707|ref|ZP_07988039.1| Methyltransferase type 11 [Strep... 85.5 6e-15
gi|320012491|gb|ADW07341.1| Protein of unknown function DUF2064 ... 85.1 7e-15
gi|345009971|ref|YP_004812325.1| hypothetical protein Strvi_2321... 84.7 1e-14
>gi|15607680|ref|NP_215054.1| hypothetical protein Rv0540 [Mycobacterium tuberculosis H37Rv]
gi|31791722|ref|NP_854215.1| hypothetical protein Mb0554 [Mycobacterium bovis AF2122/97]
gi|121636458|ref|YP_976681.1| hypothetical protein BCG_0584 [Mycobacterium bovis BCG str. Pasteur
1173P2]
67 more sequence titles
Length=220
Score = 424 bits (1091), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 219/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%)
Query 1 VSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
+SCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL
Sbjct 1 MSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
Query 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE
Sbjct 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
Query 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG
Sbjct 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
Query 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL
Sbjct 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
>gi|254363500|ref|ZP_04979546.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|134149014|gb|EBA41059.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
Length=220
Score = 423 bits (1088), Expect = 8e-117, Method: Compositional matrix adjust.
Identities = 218/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%)
Query 1 VSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
+SCLPVSVLVVAKAPEPGRVKTRLAAA+GDKVAADIAAAALLDTLDAVAAAPVTARAVAL
Sbjct 1 MSCLPVSVLVVAKAPEPGRVKTRLAAAMGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
Query 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE
Sbjct 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
Query 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG
Sbjct 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
Query 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL
Sbjct 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
>gi|289552793|ref|ZP_06442003.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|308375191|ref|ZP_07443024.2| hypothetical protein TMGG_03554 [Mycobacterium tuberculosis SUMu007]
gi|308377455|ref|ZP_07479217.2| hypothetical protein TMIG_01441 [Mycobacterium tuberculosis SUMu009]
gi|289437425|gb|EFD19918.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|308347126|gb|EFP35977.1| hypothetical protein TMGG_03554 [Mycobacterium tuberculosis SUMu007]
gi|308355700|gb|EFP44551.1| hypothetical protein TMIG_01441 [Mycobacterium tuberculosis SUMu009]
Length=217
Score = 418 bits (1075), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 216/217 (99%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 4 LPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD 63
+PVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD
Sbjct 1 MPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD 60
Query 64 LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLA 123
LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLA
Sbjct 61 LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLA 120
Query 124 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 183
DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV
Sbjct 121 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 180
Query 184 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
TLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL
Sbjct 181 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 217
>gi|15839936|ref|NP_334973.1| hypothetical protein MT0565 [Mycobacterium tuberculosis CDC1551]
gi|13880075|gb|AAK44787.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=211
Score = 407 bits (1045), Expect = 7e-112, Method: Compositional matrix adjust.
Identities = 210/211 (99%), Positives = 211/211 (100%), Gaps = 0/211 (0%)
Query 10 VVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDSAAD 69
+VAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDSAAD
Sbjct 1 MVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDSAAD 60
Query 70 SAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADCARLL 129
SAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADCARLL
Sbjct 61 SAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADCARLL 120
Query 130 LQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVTLVQRL 189
LQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVTLVQRL
Sbjct 121 LQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVTLVQRL 180
Query 190 GDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
GDFDIVDDIALVRDCCAPGSRFAQATRAAGL
Sbjct 181 GDFDIVDDIALVRDCCAPGSRFAQATRAAGL 211
>gi|167968388|ref|ZP_02550665.1| hypothetical protein MtubH3_10274 [Mycobacterium tuberculosis
H37Ra]
Length=239
Score = 400 bits (1029), Expect = 6e-110, Method: Compositional matrix adjust.
Identities = 207/209 (99%), Positives = 208/209 (99%), Gaps = 0/209 (0%)
Query 1 VSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
+SCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL
Sbjct 1 MSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
Query 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE
Sbjct 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
Query 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG
Sbjct 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
Query 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGS 209
IDVTLVQRLGDFDIVDDIALVRDCCAPG
Sbjct 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGE 209
>gi|240169219|ref|ZP_04747878.1| hypothetical protein MkanA1_07894 [Mycobacterium kansasii ATCC
12478]
Length=220
Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/220 (75%), Positives = 186/220 (85%), Gaps = 0/220 (0%)
Query 1 VSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
+S LPV+VLVVAKAPEPG KTRLA A+GD++AADIAAAALLDTLDAVAAAPV R VAL
Sbjct 1 MSVLPVTVLVVAKAPEPGFAKTRLAVAVGDRIAADIAAAALLDTLDAVAAAPVATRVVAL 60
Query 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
TG+LD AA++ +IR+RL++FTV QRGD FADRL NAH DAA+GYPVLQIGMDTPQV+A
Sbjct 61 TGNLDGAANADDIRQRLEAFTVIEQRGDDFADRLVNAHADAANGYPVLQIGMDTPQVSAG 120
Query 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
LL CAR LL PAVLGLA DGGWWVLG+ +P AAECLR VPMSQPDTGELTLKALR NG
Sbjct 121 LLGGCARRLLAAPAVLGLAIDGGWWVLGVHSPAAAECLRGVPMSQPDTGELTLKALRHNG 180
Query 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
I+V V L D D++DD+A+VRD CAP SRFA+ TRAAGL
Sbjct 181 IEVKTVTPLADLDVIDDLAVVRDACAPDSRFARVTRAAGL 220
>gi|342858951|ref|ZP_08715605.1| hypothetical protein MCOL_08743 [Mycobacterium colombiense CECT
3035]
gi|342133192|gb|EGT86395.1| hypothetical protein MCOL_08743 [Mycobacterium colombiense CECT
3035]
Length=219
Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/217 (75%), Positives = 181/217 (84%), Gaps = 0/217 (0%)
Query 4 LPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD 63
LPV++LVVAKAPEPGR KTRLAA +GD+ AA+IAAAALLDTLDAVAA PV++R VAL GD
Sbjct 3 LPVTLLVVAKAPEPGRAKTRLAATVGDRAAAEIAAAALLDTLDAVAATPVSSRVVALAGD 62
Query 64 LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLA 123
LD AA++AEIRRRL SFTV QRG FA RLA+AH DAA G PVLQIGMDTPQV+A+LLA
Sbjct 63 LDGAANAAEIRRRLASFTVIAQRGADFAARLASAHADAAGGLPVLQIGMDTPQVSADLLA 122
Query 124 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 183
CAR LL+ AVLG A DGGWWVLG+R P A+CLR VPMS PDTG+LTLKALRDNGIDV
Sbjct 123 RCARRLLETQAVLGPAHDGGWWVLGVRQPAMAQCLRTVPMSAPDTGDLTLKALRDNGIDV 182
Query 184 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
V+ L D D+VDD+A VRD CAP SRFA+ TRAAGL
Sbjct 183 ATVEALADVDVVDDVAGVRDACAPNSRFARVTRAAGL 219
>gi|183980907|ref|YP_001849198.1| hypothetical protein MMAR_0886 [Mycobacterium marinum M]
gi|183174233|gb|ACC39343.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=220
Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/220 (73%), Positives = 182/220 (83%), Gaps = 0/220 (0%)
Query 1 VSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
+S +PV++LVVAKAPEPG KTRLAA +GD+ AADIAAAALLDTLDAVAA P +R VAL
Sbjct 1 MSHVPVTLLVVAKAPEPGLAKTRLAATVGDQTAADIAAAALLDTLDAVAATPAASRVVAL 60
Query 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
TGDL +AA AEIR+RL+SFTV QRGD FADRLANAH DAADGYPVLQ+GMDTPQ++A
Sbjct 61 TGDLANAARGAEIRQRLESFTVIGQRGDDFADRLANAHADAADGYPVLQVGMDTPQISAA 120
Query 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
LLA+CAR LL+ AVLG A DGGWWVLG+ TP AAECLR VPMSQP+TGELTLKALR+ G
Sbjct 121 LLAECARRLLETSAVLGFAVDGGWWVLGVHTPAAAECLRGVPMSQPNTGELTLKALREGG 180
Query 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
IDV VQ L D D+V D+A+VR C P SRFA+ TR AG+
Sbjct 181 IDVATVQPLADVDVVADVAVVRGACGPDSRFARVTRLAGI 220
>gi|118616443|ref|YP_904775.1| hypothetical protein MUL_0639 [Mycobacterium ulcerans Agy99]
gi|118568553|gb|ABL03304.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=220
Score = 276 bits (706), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/220 (73%), Positives = 181/220 (83%), Gaps = 0/220 (0%)
Query 1 VSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
+S +PV++LVVAKAPEPG KTRLAA +GD+ AADIAAAALLDTLDAVAA P +R VAL
Sbjct 1 MSHVPVTLLVVAKAPEPGLAKTRLAATVGDQTAADIAAAALLDTLDAVAATPAASRVVAL 60
Query 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
TGDL +AA AEIRRRL+SFTV QRGD FADRLANAH DAADGYPVLQ+GMDTPQ++A
Sbjct 61 TGDLANAARGAEIRRRLESFTVIGQRGDDFADRLANAHADAADGYPVLQVGMDTPQISAA 120
Query 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
LLA+CAR LL+ AVLG A DGGWWVLG+ TP AAECLR VPMSQP+TGELTLKALR+ G
Sbjct 121 LLAECARRLLETSAVLGFAVDGGWWVLGVHTPAAAECLRGVPMSQPNTGELTLKALREGG 180
Query 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
DV VQ L D D+V D+A+VR C P SRFA+ TR AG+
Sbjct 181 FDVATVQPLADVDVVADVAVVRGACGPDSRFARVTRLAGI 220
>gi|296168276|ref|ZP_06850225.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896795|gb|EFG76427.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=219
Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/217 (73%), Positives = 178/217 (83%), Gaps = 0/217 (0%)
Query 4 LPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD 63
LPV++LVVAKAPEPG KTRLAA +GD VAA+IAAAALLDTLDAVAAAPV R VA+TG
Sbjct 3 LPVTLLVVAKAPEPGLAKTRLAATVGDVVAAEIAAAALLDTLDAVAAAPVANRVVAMTGA 62
Query 64 LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLA 123
LD+AA + EIR RL+SFTV QRGD FADRLANAH DA+DG+PV+QIGMDTPQVTA LLA
Sbjct 63 LDAAAGADEIRDRLRSFTVIPQRGDDFADRLANAHADASDGHPVVQIGMDTPQVTAALLA 122
Query 124 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 183
DCAR L + PAVLG A DGGWWVLG+R+P AAECLR VPMS+PDTG LT +AL+D GI V
Sbjct 123 DCARGLREAPAVLGPAVDGGWWVLGLRSPAAAECLRTVPMSRPDTGLLTYRALQDMGIAV 182
Query 184 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
+L DFDIVDD+A VR C P SRFA+ T AAGL
Sbjct 183 RAAPQLADFDIVDDVAAVRAACGPASRFAKLTLAAGL 219
>gi|41410134|ref|NP_962970.1| hypothetical protein MAP4036 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398967|gb|AAS06586.1| hypothetical protein MAP_4036 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460487|gb|EGO39382.1| hypothetical protein MAPs_40040 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=218
Score = 247 bits (630), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 166/217 (77%), Positives = 181/217 (84%), Gaps = 0/217 (0%)
Query 4 LPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD 63
+PV++LVVAKAPEPGR KTRLAAA+G++ AA+IAAAALLDTLDAVAAAPV AR VALTGD
Sbjct 2 IPVTLLVVAKAPEPGRAKTRLAAAVGERAAAEIAAAALLDTLDAVAAAPVAARVVALTGD 61
Query 64 LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLA 123
LD AA AEIR RL SFTV QRG+ F RLANAH DAADG PVLQIGMDTPQVTAELLA
Sbjct 62 LDGAARGAEIRARLASFTVIAQRGNDFGARLANAHADAADGLPVLQIGMDTPQVTAELLA 121
Query 124 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 183
CAR LL PAVLGLA DGGWWVLG+ P A+CLRAVPMS DTGELTLKALRDNGI+V
Sbjct 122 GCARRLLDAPAVLGLARDGGWWVLGVAAPVLADCLRAVPMSAADTGELTLKALRDNGIEV 181
Query 184 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
VQ L D D+V D+A+VRD C P SRFA+ATRAAGL
Sbjct 182 ATVQTLVDVDVVGDVAVVRDACPPASRFARATRAAGL 218
>gi|289568463|ref|ZP_06448690.1| hypothetical protein TBJG_04087 [Mycobacterium tuberculosis T17]
gi|289542217|gb|EFD45865.1| hypothetical protein TBJG_04087 [Mycobacterium tuberculosis T17]
Length=130
Score = 244 bits (623), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/130 (99%), Positives = 130/130 (100%), Gaps = 0/130 (0%)
Query 1 VSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
+SCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL
Sbjct 1 MSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
Query 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE
Sbjct 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
Query 121 LLADCARLLL 130
LLADCARLLL
Sbjct 121 LLADCARLLL 130
>gi|118462856|ref|YP_883733.1| hypothetical protein MAV_4604 [Mycobacterium avium 104]
gi|118164143|gb|ABK65040.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=218
Score = 244 bits (623), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 163/217 (76%), Positives = 179/217 (83%), Gaps = 0/217 (0%)
Query 4 LPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD 63
+PV++LVVAKAPEPGR KTRLAAA+G++ AA+IAAAALLDTLDAVAAAPV A VALTGD
Sbjct 2 IPVTLLVVAKAPEPGRAKTRLAAAVGERAAAEIAAAALLDTLDAVAAAPVAATVVALTGD 61
Query 64 LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLA 123
LD AA AEIR RL SFTV QRG+ F RLANAH DAADG PVLQIGMDTPQVTAELLA
Sbjct 62 LDGAARGAEIRARLASFTVIAQRGNDFGARLANAHADAADGLPVLQIGMDTPQVTAELLA 121
Query 124 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 183
CAR LL PAVLGLA DGGWWV G+ P A+CLRAVPMS DTG+LTLKALRDNGI+V
Sbjct 122 GCARRLLDAPAVLGLARDGGWWVFGVAAPALADCLRAVPMSAADTGDLTLKALRDNGIEV 181
Query 184 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
VQ L D D+V D+A+VRD C P SRFA+ATRAAGL
Sbjct 182 ATVQTLADVDVVGDVAVVRDACPPASRFARATRAAGL 218
>gi|108797691|ref|YP_637888.1| hypothetical protein Mmcs_0711 [Mycobacterium sp. MCS]
gi|119866779|ref|YP_936731.1| hypothetical protein Mkms_0725 [Mycobacterium sp. KMS]
gi|108768110|gb|ABG06832.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692868|gb|ABL89941.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=223
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/223 (63%), Positives = 161/223 (73%), Gaps = 3/223 (1%)
Query 1 VSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
++ LPV+VLVVAKAP PG KTRLA +G ++AA IA+AALLDTLDAV A PV AR VAL
Sbjct 1 MTQLPVTVLVVAKAPVPGLAKTRLAVTVGFEMAAVIASAALLDTLDAVLATPVQARVVAL 60
Query 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGY---PVLQIGMDTPQV 117
TGDLD + A +R +L FTV Q GD+FA+RLA AHVDAA P+LQIGMDTPQV
Sbjct 61 TGDLDDVHNGAVLRAKLAGFTVVDQHGDSFAERLAYAHVDAAAAVGDRPILQIGMDTPQV 120
Query 118 TAELLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALR 177
TA+LLA CA+ LL AVLG A DGGWW+LG+RT A+CLR VPMS+ DTGELT KAL+
Sbjct 121 TADLLARCAQTLLGADAVLGPAVDGGWWLLGVRTAAMADCLREVPMSRDDTGELTRKALQ 180
Query 178 DNGIDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
D G DV +V L D D D+ VR C PG RF AT AAGL
Sbjct 181 DRGFDVVIVDELADVDTAADVEPVRRACPPGGRFPFATAAAGL 223
>gi|126433316|ref|YP_001069007.1| hypothetical protein Mjls_0705 [Mycobacterium sp. JLS]
gi|126233116|gb|ABN96516.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=223
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/223 (62%), Positives = 160/223 (72%), Gaps = 3/223 (1%)
Query 1 VSCLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVAL 60
++ LPV+VLVVAKAP PG KTRLA +G ++AA IA+AALLDTLDAV A PV AR VAL
Sbjct 1 MTQLPVTVLVVAKAPVPGLAKTRLAVTVGFEMAAVIASAALLDTLDAVLATPVQARVVAL 60
Query 61 TGDLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGY---PVLQIGMDTPQV 117
TGDLD + A +R +L FTV Q GD+FA+RLA AH DAA P+LQIGMDTPQV
Sbjct 61 TGDLDDVHNGAVLRAKLAGFTVVDQHGDSFAERLAYAHADAAAAVGDRPILQIGMDTPQV 120
Query 118 TAELLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALR 177
TA+LLA CA+ LL AVLG A DGGWW+LG+RT A+CLR VPMS+ DTGELT KAL+
Sbjct 121 TADLLARCAQTLLGADAVLGPAVDGGWWLLGVRTAAMADCLREVPMSRDDTGELTRKALQ 180
Query 178 DNGIDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
D G DV +V L D D D+ VR C PG RF AT AAGL
Sbjct 181 DRGFDVVIVDELADVDTAADVEPVRWACPPGGRFPFATAAAGL 223
>gi|118470896|ref|YP_885398.1| hypothetical protein MSMEG_0996 [Mycobacterium smegmatis str.
MC2 155]
gi|118172183|gb|ABK73079.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=217
Score = 230 bits (587), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 144/214 (68%), Positives = 158/214 (74%), Gaps = 1/214 (0%)
Query 4 LPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD 63
L V+VLVVAKAP PG KTRLAA +G VAADIAAAALLDTLDAVA APV R VA+TGD
Sbjct 2 LAVTVLVVAKAPVPGLAKTRLAAGVGADVAADIAAAALLDTLDAVAGAPVAHRVVAMTGD 61
Query 64 LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAA-DGYPVLQIGMDTPQVTAELL 122
L A EI RL FTV QRGD FA+RL +AH DAA G+PVLQIGMDTPQV+A LL
Sbjct 62 LAEACRGREIADRLADFTVVAQRGDGFAERLVHAHSDAARPGFPVLQIGMDTPQVSAGLL 121
Query 123 ADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGID 182
+DC + LL AVLG+A DGGWWVLG+ AA CLR VPMS+PDTGELTL ALRDNGI
Sbjct 122 SDCGQALLGADAVLGMACDGGWWVLGVHDAAAAACLRTVPMSRPDTGELTLAALRDNGIT 181
Query 183 VTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATR 216
V L+ L D D +DDI VR C PGSRFA AT
Sbjct 182 VQLLAELADVDTIDDIDPVRRACRPGSRFACATE 215
>gi|289749039|ref|ZP_06508417.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289689626|gb|EFD57055.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=114
Score = 227 bits (579), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/114 (99%), Positives = 114/114 (100%), Gaps = 0/114 (0%)
Query 107 VLQIGMDTPQVTAELLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQP 166
+LQIGMDTPQVTAELLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQP
Sbjct 1 MLQIGMDTPQVTAELLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQP 60
Query 167 DTGELTLKALRDNGIDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
DTGELTLKALRDNGIDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL
Sbjct 61 DTGELTLKALRDNGIDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 114
>gi|120401902|ref|YP_951731.1| hypothetical protein Mvan_0887 [Mycobacterium vanbaalenii PYR-1]
gi|119954720|gb|ABM11725.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=221
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/219 (63%), Positives = 156/219 (72%), Gaps = 3/219 (1%)
Query 4 LPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD 63
+PV VLVVAKAP PG KTRLAAA+G VAADIAAAALLDTLDAVA P A+ VALTG+
Sbjct 2 IPVGVLVVAKAPVPGLAKTRLAAALGADVAADIAAAALLDTLDAVADCPAAAKVVALTGN 61
Query 64 LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAA---DGYPVLQIGMDTPQVTAE 120
LD A + EIR RL +F V QRG A+RL +AH DAA G P++QIGMDTPQV+ E
Sbjct 62 LDDARCADEIRSRLDNFIVIGQRGADLAERLVHAHRDAAAATGGLPIVQIGMDTPQVSPE 121
Query 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
LL CA+ LL AVLGLA DGGWWVLG+R AECLR VPMS PDTG +TL AL+D
Sbjct 122 LLERCAQSLLGSDAVLGLAGDGGWWVLGVRDAGFAECLRNVPMSTPDTGAVTLAALQDTD 181
Query 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAG 219
I V LV L D D +DD+ VR C PGSRF++AT G
Sbjct 182 IHVELVCELVDVDTIDDVGAVRAGCGPGSRFSRATAGVG 220
>gi|111021235|ref|YP_704207.1| hypothetical protein RHA1_ro04258 [Rhodococcus jostii RHA1]
gi|110820765|gb|ABG96049.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=224
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/212 (56%), Positives = 136/212 (65%), Gaps = 4/212 (1%)
Query 4 LPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD 63
L V+VLVVAKAP PG KTRLA +GD AAD+AAA+LLDTLDAV A V R VA+TGD
Sbjct 3 LDVAVLVVAKAPVPGFAKTRLARDVGDARAADLAAASLLDTLDAVTGARVAQRVVAMTGD 62
Query 64 LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAAD--GYPVLQIGMDTPQVTAEL 121
L A +I L FTV QRG+ FA+RL NAH D D G P+LQIGMDTPQVTA L
Sbjct 63 LGRAVRGTDIASALDCFTVLPQRGENFAERLVNAHADTFDTFGLPILQIGMDTPQVTAGL 122
Query 122 LADCARLLLQIPA--VLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDN 179
LA+ A LL + VLGLA DGGWW+LG+ A E + +VP S PDTG LT +AL
Sbjct 123 LAESADLLTERKGRCVLGLAEDGGWWILGVPDAVATEAIGSVPTSGPDTGRLTREALLAA 182
Query 180 GIDVTLVQRLGDFDIVDDIALVRDCCAPGSRF 211
G +V + L D D D+A V C SRF
Sbjct 183 GAEVLSLPTLRDVDYATDVAPVAALCPESSRF 214
>gi|226363581|ref|YP_002781363.1| hypothetical protein ROP_41710 [Rhodococcus opacus B4]
gi|226242070|dbj|BAH52418.1| hypothetical protein [Rhodococcus opacus B4]
Length=224
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/213 (53%), Positives = 132/213 (62%), Gaps = 4/213 (1%)
Query 3 CLPVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTG 62
L V+VLVVAKAP PG KTRLA +G+ AA +AAA+LLDTLDAVA A V R VA+TG
Sbjct 2 TLDVAVLVVAKAPVPGFAKTRLARDVGNARAAGLAAASLLDTLDAVAGAGVAHRVVAMTG 61
Query 63 DLDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGY--PVLQIGMDTPQVTAE 120
DL A ++I L FTV QRG+ FA+RL NAH D + P+LQIGMDTPQVTAE
Sbjct 62 DLGHAVRGSDIAATLGGFTVVPQRGENFAERLVNAHADTFGRFRLPILQIGMDTPQVTAE 121
Query 121 LLADCARLLLQIPA--VLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRD 178
LLA+ A L + LGLA DGGWW+LG+ +A + VP S PDTG LT AL
Sbjct 122 LLAESADRLTERRGRCALGLAEDGGWWILGVPDAVSARAILPVPTSSPDTGRLTRAALLA 181
Query 179 NGIDVTLVQRLGDFDIVDDIALVRDCCAPGSRF 211
G +V + L D D D+A V C S F
Sbjct 182 AGAEVLSLPTLRDVDYASDVAPVAALCPESSHF 214
>gi|254777037|ref|ZP_05218553.1| hypothetical protein MaviaA2_20549 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=126
Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/126 (77%), Positives = 103/126 (82%), Gaps = 0/126 (0%)
Query 95 ANAHVDAADGYPVLQIGMDTPQVTAELLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTA 154
ANAH DAADG PVLQIGMDTPQVTAELLA CAR LL PAVLGLA DGGWWV G+ P
Sbjct 1 ANAHADAADGLPVLQIGMDTPQVTAELLAGCARRLLDAPAVLGLARDGGWWVFGVAAPAL 60
Query 155 AECLRAVPMSQPDTGELTLKALRDNGIDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQA 214
A+CLRAVPMS DTGELTLKALRDNGI+V VQ L D D+V D+A+VRD C P SRFA+A
Sbjct 61 ADCLRAVPMSAADTGELTLKALRDNGIEVATVQTLADVDVVGDVAVVRDACPPASRFARA 120
Query 215 TRAAGL 220
TRAAGL
Sbjct 121 TRAAGL 126
>gi|300790133|ref|YP_003770424.1| hypothetical protein AMED_8325 [Amycolatopsis mediterranei U32]
gi|299799647|gb|ADJ50022.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340531813|gb|AEK47018.1| hypothetical protein RAM_42755 [Amycolatopsis mediterranei S699]
Length=227
Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/220 (53%), Positives = 131/220 (60%), Gaps = 6/220 (2%)
Query 5 PVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDL 64
P +LVVAKAP PG KTRL AA+IAAAALLDTLDAV A P VA+TGDL
Sbjct 4 PFILLVVAKAPVPGLAKTRLCPPATPAQAAEIAAAALLDTLDAVCAVPGAEPVVAMTGDL 63
Query 65 DSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAAD---GYPVLQIGMDTPQVTAEL 121
+AA EI L+ T QRG F RLANAH DAA G PVLQIGMDTPQVT E
Sbjct 64 GAAARPIEIGMALRYVTTIPQRGHDFGARLANAHADAAQVHAGLPVLQIGMDTPQVTPES 123
Query 122 LADCARLLLQ--IPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDN 179
LA A +L +VLG A DGGWW LG+ P A+ L VPMS+ DTGE TL+AL
Sbjct 124 LAAAAAPVLHGGHDSVLGPAADGGWWALGLAEPRHAQALADVPMSREDTGERTLRALTAC 183
Query 180 GIDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAG 219
G+ +L D D + D V C PG RFA+A A G
Sbjct 184 GLRPRRAAQLSDVDTMADARSVAAAC-PGGRFARAVAAVG 222
>gi|325003648|ref|ZP_08124760.1| hypothetical protein PseP1_33001 [Pseudonocardia sp. P1]
Length=232
Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/211 (51%), Positives = 126/211 (60%), Gaps = 4/211 (1%)
Query 7 SVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDS 66
+VLV+AKAPEPG VKTRL+ AA IAAAALLDTLDA P +A VAL GDLD
Sbjct 11 AVLVLAKAPEPGLVKTRLSPPATPGQAAGIAAAALLDTLDATTRVPRSATVVALAGDLDR 70
Query 67 AADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAA---DGYPVLQIGMDTPQVTAELLA 123
A + +RRRL Q GDA R+ANAH D A G P +Q+GMDTPQ+T LL
Sbjct 71 AVRADALRRRLGRTMRIGQCGDALGPRIANAHADLAARWPGLPTVQVGMDTPQLTPALLD 130
Query 124 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 183
+ L + A LG A DGGWW + +R PTAA L VP S+ DT E T+ ALR G+ V
Sbjct 131 EALTRLDRADAALGPAADGGWWAVALRDPTAATLLADVPTSRSDTAERTIAALRAGGLQV 190
Query 184 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQA 214
+ L D D + D V + PGSRFA A
Sbjct 191 ATLPELTDVDTMADALAVAEQV-PGSRFAAA 220
>gi|134099879|ref|YP_001105540.1| hypothetical protein SACE_3340 [Saccharopolyspora erythraea NRRL
2338]
gi|133912502|emb|CAM02615.1| hypothetical protein SACE_3340 [Saccharopolyspora erythraea NRRL
2338]
Length=221
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/217 (47%), Positives = 128/217 (59%), Gaps = 4/217 (1%)
Query 5 PVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDL 64
P ++LVVAKAP PG KTRL + + AA +AAA+LLDT++AVAA +A+TGDL
Sbjct 3 PTALLVVAKAPVPGLAKTRLTPDLSAEQAAGVAAASLLDTVEAVAATRGVQPVIAMTGDL 62
Query 65 DSAADSAEIRRRLKSFTVFRQRGDAFADRL---ANAHVDAADGYPVLQIGMDTPQVTAEL 121
D+A + E+R L +TV QRG F +RL A G PVLQIGMDTPQV+ EL
Sbjct 63 DAAVRADELRAALDGWTVLPQRGTGFGERLAAAHADTAAAHPGSPVLQIGMDTPQVSPEL 122
Query 122 LADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGI 181
L+ LL +VLG+A DGGWW G R P A L +P S+ DTG TL A+R G+
Sbjct 123 LSHACGLLSTADSVLGMAEDGGWWAAGFRDPGFAALLGGIPTSRDDTGSRTLAAMRSAGL 182
Query 182 DVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAA 218
D + L D D + D+ V PGSRFA + A
Sbjct 183 DPAELPSLSDVDTLVDLVAVAGLV-PGSRFAASVPAG 218
>gi|302530367|ref|ZP_07282709.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302439262|gb|EFL11078.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=223
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/209 (53%), Positives = 125/209 (60%), Gaps = 6/209 (2%)
Query 8 VLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDSA 67
+LVVAKAP PG KTRL AA+IAA+ALLDTLDA A VA+TGDL A
Sbjct 5 LLVVAKAPVPGFAKTRLCPPATPAQAAEIAASALLDTLDAAFATDGAITVVAMTGDLAEA 64
Query 68 ADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAA---DGYPVLQIGMDTPQVTAELLAD 124
A AEI R L+ TV QRG F RLANAH D A G PVLQIGMDTPQV+ ELLA
Sbjct 65 ARGAEIGRALRKATVIAQRGWDFGTRLANAHCDTAAVHAGLPVLQIGMDTPQVSPELLAS 124
Query 125 CAR--LLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGID 182
+L A+LG A DGGWW LG+ P A+ L VPMS+PDTG T AL+ G+
Sbjct 125 AINPVVLGASRALLGSAEDGGWWGLGLADPRQAQVLAGVPMSRPDTGFGTRAALKGAGLR 184
Query 183 VTLVQRLGDFDIVDDIALVRDCCAPGSRF 211
V + L D D +DD AL P SRF
Sbjct 185 VGELPGLSDVDTMDD-ALRVAAIRPDSRF 212
>gi|302868409|ref|YP_003837046.1| hypothetical protein Micau_3946 [Micromonospora aurantiaca ATCC
27029]
gi|302571268|gb|ADL47470.1| Protein of unknown function DUF2064 [Micromonospora aurantiaca
ATCC 27029]
Length=224
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/213 (49%), Positives = 120/213 (57%), Gaps = 4/213 (1%)
Query 8 VLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDSA 67
VLV+AKAP PG VKTRL + AA +AAAALLDTLDAV P +AL G L A
Sbjct 4 VLVMAKAPVPGLVKTRLCPPVTPVQAALLAAAALLDTLDAVRGTPGVTPVLALAGHLAEA 63
Query 68 ADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYP---VLQIGMDTPQVTAELLAD 124
D E+ L ++V QRG ADRLA+AH+D A+ +P VLQIGMDTPQ+T LA
Sbjct 64 VDGVELTAALAGWSVLPQRGTDLADRLAHAHLDVAEMFPGRWVLQIGMDTPQLTPAALAA 123
Query 125 CARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVT 184
R L A LG A DGGWW LG+R P A LRAVPMS P TG T AL G+
Sbjct 124 AVRRLEDADAALGFAHDGGWWALGLRDPRQAVMLRAVPMSTPVTGRSTWSALTGRGLRPV 183
Query 185 LVQRLGDFDIVDDIALVRDCCAPGSRFAQATRA 217
+ L D D D V P RFA+ A
Sbjct 184 PLPVLRDVDDWSDAHAVASAV-PDGRFARQVEA 215
>gi|331699678|ref|YP_004335917.1| hypothetical protein Psed_5942 [Pseudonocardia dioxanivorans
CB1190]
gi|326954367|gb|AEA28064.1| Protein of unknown function DUF2064 [Pseudonocardia dioxanivorans
CB1190]
Length=223
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/211 (51%), Positives = 124/211 (59%), Gaps = 4/211 (1%)
Query 7 SVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDS 66
+++V+AKAP GRVKTRL + AAD+AAAALLDTLDA AA P VA TG L
Sbjct 4 TIIVLAKAPVAGRVKTRLCPPATPREAADLAAAALLDTLDATAAVPDARTLVAFTGRLTD 63
Query 67 AADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAAD---GYPVLQIGMDTPQVTAELLA 123
AA + +R L QRGD R+ AH DAAD G P LQ+GMDTPQV A LL+
Sbjct 64 AARAGALRASLGRARTTVQRGDGLGARIVAAHEDAADRWPGAPTLQLGMDTPQVDAALLS 123
Query 124 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 183
C L AVLG A DGGWW LG+R P AA + VP S+ DTGE TL ALR G+ V
Sbjct 124 GCLLRLADADAVLGPAPDGGWWALGLRDPRAAAAIGDVPTSRADTGERTLYALRAAGLRV 183
Query 184 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQA 214
L+ L D A+ APGSRFA A
Sbjct 184 GLLPEL-TDVDTADDAVAVAADAPGSRFAAA 213
>gi|238061623|ref|ZP_04606332.1| hypothetical protein MCAG_02589 [Micromonospora sp. ATCC 39149]
gi|237883434|gb|EEP72262.1| hypothetical protein MCAG_02589 [Micromonospora sp. ATCC 39149]
Length=219
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/212 (48%), Positives = 114/212 (54%), Gaps = 14/212 (6%)
Query 7 SVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDS 66
+LV+ K PEPGRVKTRL + AA IAAAAL DTLD VA A AR + + G +
Sbjct 5 QLLVLTKTPEPGRVKTRLCPPCTPEQAARIAAAALADTLDTVATATAGARVLVVDGGHPT 64
Query 67 AADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAAD-GYPVLQIGMDTPQVTAELLADC 125
+ +T QRG DRLANA D+ G L IGMDTPQ+TAE L
Sbjct 65 P----------EGWTRVGQRGGPLGDRLANAFADSLTVGTATLLIGMDTPQLTAEHLDTA 114
Query 126 ARLLLQIP---AVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGID 182
LL + AVLG A DGGWW LG+R P AE LR P S DTG LTL AL G+
Sbjct 115 MGLLGTVDGPDAVLGPADDGGWWALGLREPGHAEVLRTTPTSTADTGRLTLAALHRRGLR 174
Query 183 VTLVQRLGDFDIVDDIALVRDCCAPGSRFAQA 214
V L+ RL D D D V C GSRF A
Sbjct 175 VHLLPRLRDVDTAADARAVAALCPAGSRFVAA 206
>gi|254822008|ref|ZP_05227009.1| hypothetical protein MintA_18892 [Mycobacterium intracellulare
ATCC 13950]
Length=99
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/99 (69%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 122 LADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGI 181
+ CAR LL+ PAVLG A DGGWWVLG+ P A+CLR VPMS PDTGELTLKALRD GI
Sbjct 1 MTGCARRLLEAPAVLGPARDGGWWVLGVGAPAMAQCLRTVPMSAPDTGELTLKALRDTGI 60
Query 182 DVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRAAGL 220
DV VQ L D D+VDD+A VR+ C P SRFA+ TRAAGL
Sbjct 61 DVATVQTLADVDVVDDVAAVREACGPDSRFARITRAAGL 99
>gi|311744419|ref|ZP_07718220.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312224|gb|EFQ82140.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length=225
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/207 (47%), Positives = 115/207 (56%), Gaps = 5/207 (2%)
Query 7 SVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDS 66
++LVVAKAP G KTRLA IG AA++AAAALLDTLD VA + VAL GDL
Sbjct 11 TLLVVAKAPVAGYAKTRLARTIGPVAAAEVAAAALLDTLD-VAQSVGWPVVVALAGDLAD 69
Query 67 AADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADCA 126
A D + L+ V Q GD +RLA AH A G+ V+Q+GMDTPQVTA+
Sbjct 70 AFDGDAVDAALEHTEVVAQVGDGLGERLAAAHRAADRGHGVVQVGMDTPQVTADDYRAAG 129
Query 127 RLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVTLV 186
+ AV+G A DGGWW+LG+ A L VPMS DTG LT AL G +
Sbjct 130 TSVAAGRAVIGPADDGGWWLLGLPDARRASVLTEVPMSTGDTGRLTELAL---GGSPDRL 186
Query 187 QRLGDFDIVDDIALVRDCCAPGSRFAQ 213
+ L D D DD AL PGSR +
Sbjct 187 RELRDIDGWDD-ALAVAAGIPGSRTGR 212
>gi|256397384|ref|YP_003118948.1| hypothetical protein Caci_8284 [Catenulispora acidiphila DSM
44928]
gi|256363610|gb|ACU77107.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=222
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/210 (43%), Positives = 108/210 (52%), Gaps = 13/210 (6%)
Query 7 SVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDS 66
+++V+AKAP PGRVKTRL + A +A AAL DTL+AVA A +AL GD
Sbjct 3 TLIVIAKAPVPGRVKTRLTPPFTPEQGAALAGAALADTLEAVATARFPLSVLALEGDSAL 62
Query 67 AADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAA--DGYPVLQIGMDTPQVTAELLAD 124
A A F V Q G RLA A +AA D P L IGMDTPQVT LL
Sbjct 63 VAVPA-------GFAVVPQVGGGLDRRLAAAFREAAILDPGPALLIGMDTPQVTGPLLEA 115
Query 125 CARLLLQIPAVLGLAFDGGWWVLGIRTPTAAE---CLRAVPMSQPDTGELTLKALRDNGI 181
C + A +GLA DGG+W LG P + L VPMS TG + L L D G+
Sbjct 116 CMPTAWED-ATIGLAEDGGFWSLGFSRPREVDLDGLLLGVPMSTDTTGAVQLARLTDAGL 174
Query 182 DVTLVQRLGDFDIVDDIALVRDCCAPGSRF 211
V ++ L D D V D+ V AP SRF
Sbjct 175 RVRMLPVLRDVDTVADLPAVAAAAAPVSRF 204
>gi|318058511|ref|ZP_07977234.1| hypothetical protein SSA3_11245 [Streptomyces sp. SA3_actG]
Length=205
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/208 (42%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLD 65
++LV+AK P GRVKTRL + AA +A A+L DTL VAA P T R + L G
Sbjct 2 TTLLVIAKEPRAGRVKTRLTPPFTPEQAAALAEASLTDTLRTVAATPATRRVLVLDGTPG 61
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADC 125
F V Q +RLA A A P L IGMDTPQVT LL D
Sbjct 62 PWLP--------PGFDVVPQCAGGLDERLAAAFAGCAG--PALLIGMDTPQVTPALL-DV 110
Query 126 ARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVTL 185
L + AV G A DGG+W LG+ +P A E R VPMS TG + L G+ V
Sbjct 111 R--LAEDEAVFGPALDGGFWALGLASP-APELPRGVPMSTATTGAVLRARLVAAGLRVRD 167
Query 186 VQRLGDFDIVDDI-ALVRDCCAPGSRFA 212
+ L D D D A+ R+ APGSRFA
Sbjct 168 LPPLRDVDTATDAHAVARE--APGSRFA 193
>gi|159038327|ref|YP_001537580.1| hypothetical protein Sare_2754 [Salinispora arenicola CNS-205]
gi|157917162|gb|ABV98589.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length=224
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/189 (49%), Positives = 106/189 (57%), Gaps = 3/189 (1%)
Query 8 VLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDSA 67
+LVVAK+P PG VKTRL AA +AAA+L DT+D VAA P +AL G L
Sbjct 4 LLVVAKSPIPGAVKTRLCPPATPAQAARVAAASLRDTIDVVAATPGVTPVLALHGQLADG 63
Query 68 ADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYP---VLQIGMDTPQVTAELLAD 124
D A + + +T+ QRG RLA AH D A YP VLQIGMDTPQVT LL
Sbjct 64 VDGAALSAAVAGWTILWQRGAGLGARLAAAHEDVAAAYPGRPVLQIGMDTPQVTPALLGA 123
Query 125 CARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVT 184
AR L A+LG A DGGWW LG+ P A LR VPMS +TG T AL G+ V
Sbjct 124 AARRLAAATALLGPAVDGGWWALGLADPRHAAALRDVPMSTAETGRHTAAALAGRGLRVA 183
Query 185 LVQRLGDFD 193
+ L D D
Sbjct 184 PLPMLRDVD 192
>gi|312197960|ref|YP_004018021.1| hypothetical protein FraEuI1c_4150 [Frankia sp. EuI1c]
gi|311229296|gb|ADP82151.1| Protein of unknown function DUF2064 [Frankia sp. EuI1c]
Length=233
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/216 (45%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGD-- 63
V+VLVVAK P PGRVKTRL AA +A AA+ DTL AV+ AR L
Sbjct 13 VTVLVVAKEPVPGRVKTRLTPPFTPAQAAAVAEAAIADTLTAVSG---LARIPGLGAVRP 69
Query 64 ---LDSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAE 120
LD AA +R ++ V Q F RLA A DA G P L IGMDTPQVT
Sbjct 70 VLVLDGAA-GPWLRVPVE---VVPQAAGPFDVRLAAAF-DAVSG-PALLIGMDTPQVTPA 123
Query 121 LLADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
LLAD R L + AV G A DGGWW LG+R P LR V S+PDTG L G
Sbjct 124 LLADACRALGRADAVFGPAADGGWWALGLRRPDGG-LLRGVATSRPDTGARQRDRLTRAG 182
Query 181 IDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATR 216
+ V + L D D D V P RFA A R
Sbjct 183 LRVATLPVLRDVDTCADADAVARLV-PHGRFAAAVR 217
>gi|297560681|ref|YP_003679655.1| hypothetical protein Ndas_1720 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845129|gb|ADH67149.1| Protein of unknown function DUF2064 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=222
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/211 (40%), Positives = 101/211 (48%), Gaps = 14/211 (6%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLD 65
++LV+AK P PGRVKTRL + AA +A AAL DTL V + P + R + L G
Sbjct 14 TTLLVIAKEPVPGRVKTRLTPEYSPREAAAVAEAALADTLHTVRSLPASRRLLVLEGRPG 73
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLAD- 124
F V Q G +RLA+A + P L IGMDTPQVT ELL
Sbjct 74 PWLPPG--------FEVVPQSGGGLDERLAHAFARCSG--PSLLIGMDTPQVTGELLGPA 123
Query 125 -CARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 183
+ A G + DGG+W LG+ P LR VPMS TG L D G+ V
Sbjct 124 LAPDAWERADAWFGPSEDGGFWALGLADPD-PRLLRGVPMSTRHTGRFQRARLVDAGLRV 182
Query 184 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQA 214
+ L D D D ALV PGSRF +A
Sbjct 183 RDLDVLTDVDTPRDAALV-ASLVPGSRFGRA 212
>gi|148273521|ref|YP_001223082.1| hypothetical protein CMM_2337 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831451|emb|CAN02411.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length=227
Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/219 (45%), Positives = 119/219 (55%), Gaps = 24/219 (10%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAV-AAAPVTARAVALTGDL 64
+V+V+AK PGRVKTRL + AA++A+AAL DTL AV AAP AR V L
Sbjct 2 TAVVVIAKECIPGRVKTRLHPPFTLEEAAELASAALADTLAAVDDAAP--ARRVLL---F 56
Query 65 DSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELL-- 122
D A AE + V Q +RLA A DA DG PVL +GMDTPQ+TA+L+
Sbjct 57 DGANPPAEA----AGYDVIPQVTGDLDERLA-AMFDALDG-PVLLVGMDTPQLTADLIRP 110
Query 123 -----ADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALR 177
AD AR A G A DGG+W LG+R P A +R VPMS+ DTG + L L
Sbjct 111 VLDSWADGAR---GPDAWFGPANDGGFWALGLRDPDGA-LVRGVPMSRDDTGAVQLSRLI 166
Query 178 DNGIDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATR 216
D G+DV ++ L D D VDD + RFA A R
Sbjct 167 DAGLDVAMLPELTDVDTVDDAREAAEAAP-AHRFAHALR 204
>gi|318062673|ref|ZP_07981394.1| hypothetical protein SSA3_32379 [Streptomyces sp. SA3_actG]
Length=239
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/219 (40%), Positives = 103/219 (48%), Gaps = 18/219 (8%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLD 65
+++ V+AK P PGRVKTRL AA +A AAL DTL +AA P R +AL G
Sbjct 16 LTLAVIAKEPLPGRVKTRLCPPCTPVQAAGLARAALHDTLATLAALPARRRVLALDGRPG 75
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQV--TAELLA 123
F V Q RLA A A +G PVL +GMDTPQ+ A
Sbjct 76 PWLP--------PGFDVIPQVPGTLDVRLA-AVFGACEG-PVLLLGMDTPQIDAAALAPV 125
Query 124 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTA-----AECLRAVPMSQPDTGELTLKALRD 178
A LG A DGG+W LG+ P+A A LR VPMS+PDTG L L
Sbjct 126 LAPHAFAHHEAWLGPASDGGFWALGLAAPSALPVPRAALLRGVPMSRPDTGALQHARLHA 185
Query 179 NGIDVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRA 217
G+ + L D D D AL AP SRFA A A
Sbjct 186 AGLRTGTLPTLTDVDTAPD-ALSVAALAPHSRFAAAVGA 223
>gi|29831115|ref|NP_825749.1| hypothetical protein SAV_4572 [Streptomyces avermitilis MA-4680]
gi|29608229|dbj|BAC72284.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=205
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/207 (42%), Positives = 101/207 (49%), Gaps = 15/207 (7%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLD 65
++LV+AK P PGRVKTRL + AA++A AAL+DTL VAA P R + L G
Sbjct 2 TTLLVIAKEPRPGRVKTRLTPPFTPRQAAELAEAALVDTLRTVAATPARRRVLVLDGTPG 61
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADC 125
F V Q +RLA A A P L +GMDTPQVT ELL
Sbjct 62 PWLPP--------GFEVVPQCAGGLDERLAAAFAGCAG--PALLVGMDTPQVTPELLTVD 111
Query 126 ARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVTL 185
R A G A DGG+W LG+ P LR VPMS P TG + + L G+ V
Sbjct 112 FR---GCDAYFGPAEDGGFWALGLADPDPG-LLRGVPMSTPATGAVQRERLVAAGLRVRD 167
Query 186 VQRLGDFDIVDDIALVRDCCAPGSRFA 212
+ RL D D D V AP SRFA
Sbjct 168 LPRLRDVDTAPDAESV-AASAPHSRFA 193
>gi|333026938|ref|ZP_08455002.1| hypothetical protein STTU_4442 [Streptomyces sp. Tu6071]
gi|332746790|gb|EGJ77231.1| hypothetical protein STTU_4442 [Streptomyces sp. Tu6071]
Length=200
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/203 (42%), Positives = 97/203 (48%), Gaps = 15/203 (7%)
Query 10 VVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDSAAD 69
++AK P GRVKTRL AA +A A+L DTL VAA P T R + L G
Sbjct 1 MIAKEPRAGRVKTRLTPPFTPGQAAALAEASLTDTLRTVAATPATRRVLVLDGTPGPWLP 60
Query 70 SAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADCARLL 129
F V Q +RLA A A P L IGMDTPQVT LL D L
Sbjct 61 --------PGFDVVPQCAGGLDERLAAAFAGCAG--PALLIGMDTPQVTPALL-DV--RL 107
Query 130 LQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVTLVQRL 189
+ AV G A DGG+W LG+ +P A E LR VPMS TG + L G+ V + L
Sbjct 108 AEGEAVFGPALDGGFWALGLASP-APELLRGVPMSTATTGAVLRARLVAAGLRVRDLPPL 166
Query 190 GDFDIVDDIALVRDCCAPGSRFA 212
D D D V A GSRFA
Sbjct 167 RDVDTAADAHAVAG-EAHGSRFA 188
>gi|326328831|ref|ZP_08195167.1| hypothetical protein NBCG_00270 [Nocardioidaceae bacterium Broad-1]
gi|325953453|gb|EGD45457.1| hypothetical protein NBCG_00270 [Nocardioidaceae bacterium Broad-1]
Length=198
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/117 (53%), Positives = 78/117 (67%), Gaps = 3/117 (2%)
Query 7 SVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARA-VALTGDLD 65
++L+VAKAP PG VKTRLAA +G+ A +AAAALLDT+DA A A T R ++L+GD+
Sbjct 5 TLLLVAKAPVPGLVKTRLAADVGETTATAVAAAALLDTIDACALAVGTDRCRLSLSGDVS 64
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELL 122
+ EI + +TV QRG +RLANAH D A PV+QIGMDTPQVT L
Sbjct 65 VGFRADEIEAAVAGWTVTAQRGSGLGERLANAHADVAG--PVVQIGMDTPQVTPTSL 119
>gi|290955000|ref|YP_003486182.1| hypothetical protein SCAB_4061 [Streptomyces scabiei 87.22]
gi|260644526|emb|CBG67611.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=205
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/210 (43%), Positives = 103/210 (50%), Gaps = 23/210 (10%)
Query 7 SVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLDS 66
++LV+AK P PGRVKTRL + AA +A AAL+DTL AVAAAP R + L G
Sbjct 3 TLLVIAKEPRPGRVKTRLTPPFSPREAAALAEAALVDTLSAVAAAPADRRVLVLAGKPGP 62
Query 67 AADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLA--- 123
F V Q +RLA A DG P L IGMDTPQVT ELLA
Sbjct 63 WLPPG--------FDVVPQGDGGLDERLAAAFA-LCDG-PALLIGMDTPQVTPELLAVEP 112
Query 124 -DCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGID 182
C A G A DGG+W LG+ P A LR VPMS P TG + L G+
Sbjct 113 GGCD-------AYFGAAEDGGFWALGLTRPDPA-LLRGVPMSTPVTGAVQRARLVSAGLR 164
Query 183 VTLVQRLGDFDIVDDIALVRDCCAPGSRFA 212
V + L D D D V AP SRFA
Sbjct 165 VRDLPVLRDVDTAADAEAV-AAVAPHSRFA 193
>gi|297155363|gb|ADI05075.1| hypothetical protein SBI_01954 [Streptomyces bingchenggensis
BCW-1]
Length=205
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/210 (42%), Positives = 100/210 (48%), Gaps = 23/210 (10%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLD 65
++LV+AK P PG VKTRL AA +A AAL DTL AVAA P + R + L G
Sbjct 2 TTLLVIAKEPRPGWVKTRLTPPFTASEAASLARAALADTLSAVAATPASRRVLVLDGTPG 61
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELL--- 122
F V Q +RLA+A A P L IGMDTPQVT ELL
Sbjct 62 PWLP--------PGFDVVPQCAGGLDERLADAF--AGCEGPALLIGMDTPQVTPELLTVD 111
Query 123 -ADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGI 181
ADC A G A DGG+W LG+ P LR VPMS TG L + L D G+
Sbjct 112 FADCD-------ACFGPAEDGGFWALGLAEPDPG-LLRGVPMSTAATGALQRERLVDAGL 163
Query 182 DVTLVQRLGDFDIVDDIALVRDCCAPGSRF 211
V + RL D D D A AP RF
Sbjct 164 RVRDLPRLRDVDTARD-AWAVAAEAPHGRF 192
>gi|163839441|ref|YP_001623846.1| hypothetical protein RSal33209_0685 [Renibacterium salmoninarum
ATCC 33209]
gi|162952917|gb|ABY22432.1| conserved hypothetical protein [Renibacterium salmoninarum ATCC
33209]
Length=226
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/216 (37%), Positives = 101/216 (47%), Gaps = 16/216 (7%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLD 65
+S+ V+AK PG VKTRL + A +A ++L TL V P R + G
Sbjct 10 LSITVIAKECLPGNVKTRLTPPLEPAQGAALAQSSLSQTLRTVRKLPAQQRLLIFDGTPT 69
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTA----EL 121
S + R + FTV Q RLA A A G P+L +GMDTPQ+ A L
Sbjct 70 S------VDR--EGFTVVPQGSGGLDARLA-AICSAVTG-PLLIVGMDTPQLDAAALQPL 119
Query 122 LADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGI 181
L+D + + A G A DGG+W L + TP E + VPMS DTG + L L G+
Sbjct 120 LSDWSGDSAEYDAWFGPADDGGFWALALATPD-PELILGVPMSSADTGRVQLARLEAAGL 178
Query 182 DVTLVQRLGDFDIVDDIALVRDCCAPGSRFAQATRA 217
V + L D D +D V C PGS FA A
Sbjct 179 TVGTLPALRDVDYFNDAQYVASQC-PGSEFANYVEA 213
>gi|86739693|ref|YP_480093.1| hypothetical protein Francci3_0980 [Frankia sp. CcI3]
gi|86566555|gb|ABD10364.1| conserved hypothetical protein [Frankia sp. CcI3]
Length=240
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/139 (46%), Positives = 72/139 (52%), Gaps = 4/139 (2%)
Query 79 SFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADCARLLLQIPAVLGL 138
+ V Q F RLA A DA P L IGMDTPQVTA LLA L AV G
Sbjct 92 AIEVMPQVSGPFDVRLAAA-FDAGT-EPTLLIGMDTPQVTAALLASACHALHATDAVFGP 149
Query 139 AFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDVTLVQRLGDFDIVDDI 198
A DGGWW LG+ TP + LR VP S+PDTG L + G+ VT + + D D + D
Sbjct 150 AADGGWWALGLTTPD-GDLLRGVPTSRPDTGARQRARLSEAGLTVTTLPTVRDVDTMADA 208
Query 199 ALVRDCCAPGSRFAQATRA 217
V PG RFA A RA
Sbjct 209 DAVARLV-PGGRFAAALRA 226
>gi|170782840|ref|YP_001711174.1| hypothetical protein CMS_2517 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157410|emb|CAQ02599.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length=227
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/197 (46%), Positives = 108/197 (55%), Gaps = 23/197 (11%)
Query 7 SVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAV-AAAPVTARAVALTGDLD 65
+V+V+AK PGRVKTRL + AA++A+AAL DTL AV AAP R V L D
Sbjct 3 TVVVIAKECIPGRVKTRLHPPFTLEEAAELASAALADTLAAVDDAAP--ERRVLL---FD 57
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELL--- 122
A AE + V Q +RLA A DA DG PVL +GMDTPQ+TA LL
Sbjct 58 GANPPAEA----AGYDVIPQVAGDLDERLA-AMYDALDG-PVLLVGMDTPQLTAALLRPV 111
Query 123 ----ADCARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRD 178
AD A A G A DGG+W LG+R P A +R VPMS+ DTG + L L D
Sbjct 112 LDSWADGAG---GPDAWFGPANDGGFWALGLRDPDGA-LVRGVPMSRDDTGAVQLSRLID 167
Query 179 NGIDVTLVQRLGDFDIV 195
G+DV ++ L D D V
Sbjct 168 AGLDVAMLPELTDVDTV 184
>gi|182440496|ref|YP_001828215.1| hypothetical protein SGR_6703 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178469012|dbj|BAG23532.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length=215
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/212 (40%), Positives = 100/212 (48%), Gaps = 14/212 (6%)
Query 5 PVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDL 64
P +LV+AK P GRVKTRL AA++AAAAL DTLDAV A P R + L G
Sbjct 6 PTELLVIAKEPVAGRVKTRLCPPFSPAEAAELAAAALADTLDAVLALPARRRVLVLDGRP 65
Query 65 DSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLAD 124
F V Q +RLA A P L +GMDTPQ+ LLA
Sbjct 66 GPWVP--------PGFEVVPQSAGGLDERLAAAFGGCTG--PALLVGMDTPQIGPALLAP 115
Query 125 C--ARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGID 182
+ A G A DGG+W LG+ P A LR VPMS P+TG + L + G+
Sbjct 116 ALDPAAWEGVGAWFGPAEDGGFWALGLADPDPA-LLRGVPMSVPETGAEQRRRLVEAGLA 174
Query 183 VTLVQRLGDFDIVDDIALVRDCCAPGSRFAQA 214
V + L D D D V APG RFA A
Sbjct 175 VRDLPVLVDVDTAADAHRVA-SAAPGGRFAAA 205
>gi|326781166|ref|ZP_08240431.1| Protein of unknown function DUF2064 [Streptomyces cf. griseus
XylebKG-1]
gi|326661499|gb|EGE46345.1| Protein of unknown function DUF2064 [Streptomyces griseus XylebKG-1]
Length=215
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/212 (40%), Positives = 100/212 (48%), Gaps = 14/212 (6%)
Query 5 PVSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDL 64
P +LV+AK P GRVKTRL AA++AAAAL DTLDAV A P R + L G
Sbjct 6 PTELLVIAKEPVAGRVKTRLCPPFSPAEAAELAAAALADTLDAVLALPARRRVLVLDGRP 65
Query 65 DSAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLAD 124
F V Q +RLA A P L +GMDTPQ+ LLA
Sbjct 66 GPWVP--------PGFEVVPQSAGGLDERLAAAFGGCTG--PALLVGMDTPQIGPALLAP 115
Query 125 C--ARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGID 182
+ A G A DGG+W LG+ P A LR VPMS P+TG + L + G+
Sbjct 116 ALDPAAWEGVGAWFGPAEDGGFWALGLADPDPA-LLRGVPMSVPETGAEQRRRLVEAGLA 174
Query 183 VTLVQRLGDFDIVDDIALVRDCCAPGSRFAQA 214
V + L D D D V APG RFA A
Sbjct 175 VRDLPVLVDVDTAADAHRVA-SAAPGGRFAAA 205
>gi|318080707|ref|ZP_07988039.1| Methyltransferase type 11 [Streptomyces sp. SA3_actF]
Length=501
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/195 (39%), Positives = 92/195 (48%), Gaps = 17/195 (8%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLD 65
+++ V+AK P PGRVKTRL AA +A AAL DTL +AA P R +AL G
Sbjct 16 LTLAVIAKEPLPGRVKTRLCPPCTPVQAAGLARAALHDTLATLAALPARRRVLALDGRPG 75
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQV--TAELLA 123
F V Q RLA A A +G PVL +GMDTPQ+ A
Sbjct 76 PWLP--------PGFDVIPQVPGTLDVRLA-AVFGACEG-PVLLLGMDTPQIDAAALAPV 125
Query 124 DCARLLLQIPAVLGLAFDGGWWVLGIRTPTA-----AECLRAVPMSQPDTGELTLKALRD 178
A LG A DGG+W LG+ P+A A LR VPMS+PDTG L L
Sbjct 126 LAPHAFAHHEAWLGPASDGGFWALGLAAPSALPVPRAALLRGVPMSRPDTGALQHARLHA 185
Query 179 NGIDVTLVQRLGDFD 193
G+ + L D D
Sbjct 186 AGLRTGTLPTLTDVD 200
>gi|320012491|gb|ADW07341.1| Protein of unknown function DUF2064 [Streptomyces flavogriseus
ATCC 33331]
Length=219
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/201 (39%), Positives = 97/201 (49%), Gaps = 19/201 (9%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLD 65
++LV+AK P PGRVKTRL AA++A AAL DTL V P R + L G
Sbjct 11 TALLVIAKEPVPGRVKTRLTPPFSPVEAAELATAALEDTLRTVLTLPARRRVLVLDGHPG 70
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADC 125
S F V Q +R+A A + P L IGMDTPQ+T+ LLA
Sbjct 71 PWTPSG--------FDVLPQCAGTLDERIAAAFGTCSG--PALLIGMDTPQITSALLAPA 120
Query 126 ARLLLQ-----IPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNG 180
L Q A G A DGG+W LG+ P +R VPMS+P+TG + L D G
Sbjct 121 ---LAQDAWDGCDAWFGPAEDGGFWALGLAVPDPG-LVRGVPMSRPETGAIQRARLTDAG 176
Query 181 IDVTLVQRLGDFDIVDDIALV 201
+ V +Q L D D +D V
Sbjct 177 LTVRDLQPLRDVDTAEDARYV 197
>gi|345009971|ref|YP_004812325.1| hypothetical protein Strvi_2321 [Streptomyces violaceusniger
Tu 4113]
gi|344036320|gb|AEM82045.1| Protein of unknown function DUF2064 [Streptomyces violaceusniger
Tu 4113]
Length=259
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/210 (38%), Positives = 92/210 (44%), Gaps = 14/210 (6%)
Query 6 VSVLVVAKAPEPGRVKTRLAAAIGDKVAADIAAAALLDTLDAVAAAPVTARAVALTGDLD 65
++L++AK P PGRVKTRL AA +A A L DTL A A P R + L G
Sbjct 51 TTLLIIAKEPVPGRVKTRLTPPYTPAEAASLAEACLADTLHAALAMPARRRVLVLDGHPG 110
Query 66 SAADSAEIRRRLKSFTVFRQRGDAFADRLANAHVDAADGYPVLQIGMDTPQVTAELLADC 125
F V Q +RLA A L IGMDTPQVT LLA
Sbjct 111 PWLP--------PGFEVVPQCDGGLDERLAAAFATCRGA--ALLIGMDTPQVTPALLAPA 160
Query 126 --ARLLLQIPAVLGLAFDGGWWVLGIRTPTAAECLRAVPMSQPDTGELTLKALRDNGIDV 183
A G A DGG+W LG+ P LR VPMS TG + L D G+ V
Sbjct 161 LGPNGWHDCDAWFGPAADGGFWALGLAQPDPG-LLRGVPMSTATTGAAQRRRLTDAGLRV 219
Query 184 TLVQRLGDFDIVDDIALVRDCCAPGSRFAQ 213
+ L D D +D A V P RFA+
Sbjct 220 RDLPMLRDVDTAEDAARVA-ADVPDGRFAR 248
Lambda K H
0.322 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 273402666736
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40