BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0556 Length=171 Score E Sequences producing significant alignments: (Bits) Value gi|15607696|ref|NP_215070.1| transmembrane protein [Mycobacteriu... 335 2e-90 gi|15839954|ref|NP_334991.1| hypothetical protein MT0582 [Mycoba... 332 9e-90 gi|340625583|ref|YP_004744035.1| hypothetical protein MCAN_05591... 307 4e-82 gi|183980923|ref|YP_001849214.1| hypothetical protein MMAR_0902 ... 278 2e-73 gi|240169236|ref|ZP_04747895.1| hypothetical protein MkanA1_0797... 271 2e-71 gi|118616458|ref|YP_904790.1| hypothetical protein MUL_0655 [Myc... 269 1e-70 gi|15828216|ref|NP_302479.1| hypothetical protein ML2271 [Mycoba... 265 1e-69 gi|289760675|ref|ZP_06520053.1| conserved hypothetical protein [... 263 5e-69 gi|41410151|ref|NP_962987.1| hypothetical protein MAP4053 [Mycob... 256 1e-66 gi|118465568|ref|YP_883716.1| hypothetical protein MAV_4587 [Myc... 248 3e-64 gi|296168320|ref|ZP_06850244.1| transmembrane protein [Mycobacte... 242 2e-62 gi|254818363|ref|ZP_05223364.1| hypothetical protein MintA_00470... 202 1e-50 gi|342858934|ref|ZP_08715588.1| hypothetical protein MCOL_08658 ... 200 6e-50 gi|333989190|ref|YP_004521804.1| transmembrane protein [Mycobact... 199 1e-49 gi|120401991|ref|YP_951820.1| putative transmembrane protein [My... 191 2e-47 gi|118472595|ref|YP_885504.1| transmembrane protein [Mycobacteri... 190 7e-47 gi|108797731|ref|YP_637928.1| hypothetical protein Mmcs_0752 [My... 189 1e-46 gi|315442456|ref|YP_004075335.1| hypothetical protein Mspyr1_080... 189 2e-46 gi|145225836|ref|YP_001136514.1| hypothetical protein Mflv_5262 ... 188 3e-46 gi|169631011|ref|YP_001704660.1| hypothetical protein MAB_3932c ... 181 3e-44 gi|226305194|ref|YP_002765152.1| hypothetical protein RER_17050 ... 142 1e-32 gi|296138463|ref|YP_003645706.1| hypothetical protein Tpau_0730 ... 142 2e-32 gi|229490658|ref|ZP_04384496.1| putative conserved transmembrane... 138 3e-31 gi|226361084|ref|YP_002778862.1| hypothetical protein ROP_16700 ... 132 2e-29 gi|333918064|ref|YP_004491645.1| hypothetical protein AS9A_0386 ... 126 1e-27 gi|325675335|ref|ZP_08155019.1| transmembrane protein [Rhodococc... 125 2e-27 gi|111018989|ref|YP_701961.1| hypothetical protein RHA1_ro01996 ... 123 8e-27 gi|312141028|ref|YP_004008364.1| integral membrane protein [Rhod... 122 2e-26 gi|54027101|ref|YP_121343.1| hypothetical protein nfa51270 [Noca... 107 6e-22 gi|262201086|ref|YP_003272294.1| hypothetical protein Gbro_1093 ... 106 2e-21 gi|302523869|ref|ZP_07276211.1| predicted protein [Streptomyces ... 99.4 2e-19 gi|326383005|ref|ZP_08204694.1| hypothetical protein SCNU_08711 ... 97.8 5e-19 gi|300782443|ref|YP_003762734.1| hypothetical protein AMED_0512 ... 94.4 6e-18 gi|257054389|ref|YP_003132221.1| hypothetical protein Svir_03130... 92.0 3e-17 gi|343925611|ref|ZP_08765128.1| hypothetical protein GOALK_048_0... 88.2 4e-16 gi|213964924|ref|ZP_03393123.1| conserved hypothetical protein [... 87.8 5e-16 gi|344045787|gb|EGV41456.1| hypothetical protein CgS9114_01568 [... 84.3 6e-15 gi|300779875|ref|ZP_07089731.1| conserved hypothetical protein [... 84.0 7e-15 gi|306835161|ref|ZP_07468198.1| conserved hypothetical protein [... 84.0 8e-15 gi|19551711|ref|NP_599713.1| hypothetical protein NCgl0451 [Cory... 83.6 9e-15 gi|145294620|ref|YP_001137441.1| hypothetical protein cgR_0571 [... 83.6 1e-14 gi|62389366|ref|YP_224768.1| hypothetical protein cg0553 [Coryne... 83.6 1e-14 gi|237786438|ref|YP_002907143.1| hypothetical protein ckrop_1885... 82.4 2e-14 gi|38233038|ref|NP_938805.1| hypothetical protein DIP0424 [Coryn... 82.4 2e-14 gi|311739259|ref|ZP_07713096.1| conserved hypothetical protein [... 82.4 2e-14 gi|227502594|ref|ZP_03932643.1| transmembrane protein [Corynebac... 80.9 6e-14 gi|255324685|ref|ZP_05365799.1| conserved hypothetical protein [... 80.9 6e-14 gi|227505149|ref|ZP_03935198.1| transmembrane protein [Corynebac... 80.5 8e-14 gi|227549788|ref|ZP_03979837.1| transmembrane protein [Corynebac... 80.5 9e-14 gi|337289964|ref|YP_004628985.1| hypothetical protein CULC22_003... 80.1 1e-13 >gi|15607696|ref|NP_215070.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|148660325|ref|YP_001281848.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|167968371|ref|ZP_02550648.1| putative conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] 10 more sequence titles Length=171 Score = 335 bits (859), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 170/171 (99%), Positives = 171/171 (100%), Gaps = 0/171 (0%) Query 1 VISPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI 60 +ISPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI Sbjct 1 MISPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI 60 Query 61 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL 120 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL Sbjct 61 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL 120 Query 121 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG 171 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG Sbjct 121 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG 171 >gi|15839954|ref|NP_334991.1| hypothetical protein MT0582 [Mycobacterium tuberculosis CDC1551] gi|31791738|ref|NP_854231.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|121636474|ref|YP_976697.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 59 more sequence titles Length=171 Score = 332 bits (852), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 169/171 (99%), Positives = 170/171 (99%), Gaps = 0/171 (0%) Query 1 VISPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI 60 +ISPKPLLHILIHG SDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI Sbjct 1 MISPKPLLHILIHGRSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI 60 Query 61 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL 120 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL Sbjct 61 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL 120 Query 121 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG 171 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG Sbjct 121 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG 171 >gi|340625583|ref|YP_004744035.1| hypothetical protein MCAN_05591 [Mycobacterium canettii CIPT 140010059] gi|340003773|emb|CCC42899.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=171 Score = 307 bits (786), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 167/171 (98%), Positives = 168/171 (99%), Gaps = 0/171 (0%) Query 1 VISPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI 60 +ISPKPLLHILIHG SD LPDTR RIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI Sbjct 1 MISPKPLLHILIHGRSDGLPDTRARIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI 60 Query 61 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL 120 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL Sbjct 61 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL 120 Query 121 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG 171 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG Sbjct 121 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG 171 >gi|183980923|ref|YP_001849214.1| hypothetical protein MMAR_0902 [Mycobacterium marinum M] gi|183174249|gb|ACC39359.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=174 Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 135/168 (81%), Positives = 154/168 (92%), Gaps = 0/168 (0%) Query 3 SPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQR 62 SPK LL ILIHG ++E+PDT R V+RW+RI+VLI+TGLVTLQS+LLVAGAWRND+AI R Sbjct 3 SPKKLLRILIHGTTEEMPDTPARTVVRWIRISVLILTGLVTLQSILLVAGAWRNDLAIDR 62 Query 63 NMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVR 122 NMGVAQAEVLSAGPRRSTIEFVTPDR+TYRP+LGVLYPSEL+TGMRIYVEYNKRDPNLVR Sbjct 63 NMGVAQAEVLSAGPRRSTIEFVTPDRVTYRPELGVLYPSELATGMRIYVEYNKRDPNLVR 122 Query 123 VQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASAT 170 VQHRNAGLAIIPAGSIAVVAWL+A ALV LA+LD+RL++R + + T Sbjct 123 VQHRNAGLAIIPAGSIAVVAWLVATVALVGLALLDRRLDKRPDQRADT 170 >gi|240169236|ref|ZP_04747895.1| hypothetical protein MkanA1_07979 [Mycobacterium kansasii ATCC 12478] Length=170 Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 137/169 (82%), Positives = 153/169 (91%), Gaps = 0/169 (0%) Query 1 VISPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI 60 +ISPK LL ILIHG S+ELPDT R V+RW+RI VLIVT LVTLQSVLLVAGAWRND+AI Sbjct 1 MISPKILLRILIHGTSEELPDTWPRRVVRWVRITVLIVTALVTLQSVLLVAGAWRNDLAI 60 Query 61 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL 120 +RNMGVAQAEVLSAGPRRSTIEFVTP+RITYRP+LGVLYPSEL+TGMRIYVEYNK+DPNL Sbjct 61 ERNMGVAQAEVLSAGPRRSTIEFVTPERITYRPELGVLYPSELATGMRIYVEYNKKDPNL 120 Query 121 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASA 169 VRVQHRNAGLAIIPAGSIAVVAWL A AL+ LA+LD+RL++ N A + Sbjct 121 VRVQHRNAGLAIIPAGSIAVVAWLAATGALIGLALLDRRLDKHLNRAPS 169 >gi|118616458|ref|YP_904790.1| hypothetical protein MUL_0655 [Mycobacterium ulcerans Agy99] gi|118568568|gb|ABL03319.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=174 Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 131/168 (78%), Positives = 150/168 (90%), Gaps = 0/168 (0%) Query 3 SPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQR 62 SPK LL ILIHG ++E+PDT R V+ W+RI+VLI+TGLVTLQS+LLVAGAWR D+AI R Sbjct 3 SPKKLLRILIHGTTEEMPDTPARTVVHWIRISVLILTGLVTLQSILLVAGAWRIDLAIDR 62 Query 63 NMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVR 122 NMGVAQAEVLSAGPRRSTIEFVTPDR+TYRP+LGVLYPSEL+TGMRIYVEYNKRDPNLVR Sbjct 63 NMGVAQAEVLSAGPRRSTIEFVTPDRVTYRPELGVLYPSELATGMRIYVEYNKRDPNLVR 122 Query 123 VQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASAT 170 VQHRNAGLAIIPAGSIA VAWL+ ALV LA+LD+RL++R + + T Sbjct 123 VQHRNAGLAIIPAGSIAAVAWLVTTVALVGLALLDRRLDKRPDQRADT 170 >gi|15828216|ref|NP_302479.1| hypothetical protein ML2271 [Mycobacterium leprae TN] gi|221230693|ref|YP_002504109.1| hypothetical protein MLBr_02271 [Mycobacterium leprae Br4923] gi|13093909|emb|CAC31787.1| putative membrane protein [Mycobacterium leprae] gi|219933800|emb|CAR72369.1| putative membrane protein [Mycobacterium leprae Br4923] Length=175 Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 133/168 (80%), Positives = 146/168 (87%), Gaps = 0/168 (0%) Query 1 VISPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAI 60 +I K LL ILIHG SDE P TR R+++RW RIAVLIVTGL+TLQSVLLVAGAWRND+ I Sbjct 1 MILSKSLLRILIHGRSDEPPSTRARVIMRWGRIAVLIVTGLITLQSVLLVAGAWRNDLTI 60 Query 61 QRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNL 120 Q NMGVAQAEVLSAGPRRSTIEFVTP+R+TYRP+LGVLY SELSTGMRIYVEYNK DPNL Sbjct 61 QHNMGVAQAEVLSAGPRRSTIEFVTPERVTYRPELGVLYLSELSTGMRIYVEYNKNDPNL 120 Query 121 VRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSAS 168 VRV+HRNAGLAIIPAGSIAVV WL A LV LAVLDKRL+R S++ Sbjct 121 VRVRHRNAGLAIIPAGSIAVVCWLAATVVLVALAVLDKRLDRHTESSA 168 >gi|289760675|ref|ZP_06520053.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289708181|gb|EFD72197.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=134 Score = 263 bits (673), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 133/134 (99%), Positives = 134/134 (100%), Gaps = 0/134 (0%) Query 38 VTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGV 97 +TGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGV Sbjct 1 MTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGV 60 Query 98 LYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLD 157 LYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLD Sbjct 61 LYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLD 120 Query 158 KRLERRENSASATG 171 KRLERRENSASATG Sbjct 121 KRLERRENSASATG 134 >gi|41410151|ref|NP_962987.1| hypothetical protein MAP4053 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398984|gb|AAS06603.1| hypothetical protein MAP_4053 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460470|gb|EGO39365.1| hypothetical protein MAPs_39870 [Mycobacterium avium subsp. paratuberculosis S397] Length=174 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 136/167 (82%), Positives = 144/167 (87%), Gaps = 0/167 (0%) Query 2 ISPKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQ 61 ISPK LLHILIHG SD TRGRI LRW RIAVLIVTGLVTLQSVLLVAGAWRND+AI Sbjct 3 ISPKALLHILIHGRSDPPETTRGRIALRWARIAVLIVTGLVTLQSVLLVAGAWRNDLAIT 62 Query 62 RNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLV 121 NMGVAQAEVLSAGPRRSTIEFVTP+R+TYRP+LGVLYPS L+TGMRIYVEYNK DPNLV Sbjct 63 HNMGVAQAEVLSAGPRRSTIEFVTPERVTYRPELGVLYPSHLATGMRIYVEYNKNDPNLV 122 Query 122 RVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSAS 168 RVQHRNAGLAIIPAGSIAVV WL AA L +LA+ DK L+RR A Sbjct 123 RVQHRNAGLAIIPAGSIAVVGWLGAAVLLALLALADKWLDRRGKGAG 169 >gi|118465568|ref|YP_883716.1| hypothetical protein MAV_4587 [Mycobacterium avium 104] gi|254777019|ref|ZP_05218535.1| hypothetical protein MaviaA2_20451 [Mycobacterium avium subsp. avium ATCC 25291] gi|118166855|gb|ABK67752.1| conserved hypothetical protein [Mycobacterium avium 104] Length=167 Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 132/162 (82%), Positives = 141/162 (88%), Gaps = 0/162 (0%) Query 7 LLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGV 66 +LHILIHG SD TRGRI LRW RIAVLIVTGLVTLQSVLLVAGAWRND+AI NMGV Sbjct 1 MLHILIHGRSDPPETTRGRIALRWARIAVLIVTGLVTLQSVLLVAGAWRNDLAITHNMGV 60 Query 67 AQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHR 126 AQAEVLSAGPRRSTIEFVTP+R+TYRP+LGVLYPS L+TGMRIYVEYNK DPNLVRVQHR Sbjct 61 AQAEVLSAGPRRSTIEFVTPERVTYRPELGVLYPSHLATGMRIYVEYNKNDPNLVRVQHR 120 Query 127 NAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSAS 168 NAGLAIIPAGSIAVV WL AA LV+LA+ DK L+RR A Sbjct 121 NAGLAIIPAGSIAVVGWLGAAVLLVLLALADKWLDRRGKGAG 162 >gi|296168320|ref|ZP_06850244.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896751|gb|EFG76384.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=177 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 132/164 (81%), Positives = 143/164 (88%), Gaps = 0/164 (0%) Query 5 KPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNM 64 K LLHILIHG SD P+T RI LRW RIAVLIVTGLVTLQSVLLVAGAWR+D+AI NM Sbjct 5 KRLLHILIHGRSDRPPNTPSRIALRWARIAVLIVTGLVTLQSVLLVAGAWRDDLAIGHNM 64 Query 65 GVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQ 124 GVAQAEVLSAG RRSTIEFVTP+R+TYRP+LGVLYPS L+TGMRIYVEYNK DPNLVRVQ Sbjct 65 GVAQAEVLSAGQRRSTIEFVTPERVTYRPELGVLYPSHLATGMRIYVEYNKNDPNLVRVQ 124 Query 125 HRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSAS 168 HRNAGLAIIPAGSIAVV WL+AAA LV LA+LDK L+RR + Sbjct 125 HRNAGLAIIPAGSIAVVCWLVAAALLVGLALLDKLLDRRAEGSD 168 >gi|254818363|ref|ZP_05223364.1| hypothetical protein MintA_00470 [Mycobacterium intracellulare ATCC 13950] Length=139 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 113/134 (85%), Positives = 122/134 (92%), Gaps = 0/134 (0%) Query 35 VLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQ 94 +LIV GLVTLQSVLLVAGAWRND+AI NMGVAQAEVLSAGPRRSTIEFVTP+R+TYRP+ Sbjct 1 MLIVAGLVTLQSVLLVAGAWRNDLAITHNMGVAQAEVLSAGPRRSTIEFVTPERVTYRPE 60 Query 95 LGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLA 154 LGVLYPS L+TGMRIYVEYNK DPNLVRVQHRNAGLAIIPAGSIAVVAWL AAA LV LA Sbjct 61 LGVLYPSHLATGMRIYVEYNKNDPNLVRVQHRNAGLAIIPAGSIAVVAWLGAAALLVALA 120 Query 155 VLDKRLERRENSAS 168 +LDK L+RR +A Sbjct 121 LLDKWLDRRAETAE 134 >gi|342858934|ref|ZP_08715588.1| hypothetical protein MCOL_08658 [Mycobacterium colombiense CECT 3035] gi|342133175|gb|EGT86378.1| hypothetical protein MCOL_08658 [Mycobacterium colombiense CECT 3035] Length=150 Score = 200 bits (509), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 114/136 (84%), Positives = 125/136 (92%), Gaps = 0/136 (0%) Query 35 VLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQ 94 +LIVTGLVTLQSVLLVAGAWR+DIAI NMGVAQAEVLSAGPRRSTIEFVTP+R+TYRP+ Sbjct 1 MLIVTGLVTLQSVLLVAGAWRDDIAITHNMGVAQAEVLSAGPRRSTIEFVTPERVTYRPE 60 Query 95 LGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLA 154 LGVLYPS L+TGMRIYVEYNK DPNLVRVQHRNAGLAIIPAGSIAVVAWL AAA LV LA Sbjct 61 LGVLYPSHLATGMRIYVEYNKNDPNLVRVQHRNAGLAIIPAGSIAVVAWLAAAAMLVALA 120 Query 155 VLDKRLERRENSASAT 170 +LDK L+RR++ A+ Sbjct 121 LLDKWLDRRDDPGDAS 136 >gi|333989190|ref|YP_004521804.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333485159|gb|AEF34551.1| transmembrane protein [Mycobacterium sp. JDM601] Length=130 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 99/130 (77%), Positives = 117/130 (90%), Gaps = 0/130 (0%) Query 33 IAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYR 92 +AVLI+ +VTLQS+LLVAGAWRNDIAI+R+MGVA+AEVL+AG RRSTIEFVTP+RITYR Sbjct 1 MAVLIMMIVVTLQSLLLVAGAWRNDIAIERDMGVAEAEVLNAGFRRSTIEFVTPERITYR 60 Query 93 PQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVV 152 P+LGVLYPSEL+TGMRIYVEY+K DP+LVRVQHR A LAIIPAGSI V+AWL+ AAL Sbjct 61 PELGVLYPSELATGMRIYVEYDKSDPDLVRVQHRTAVLAIIPAGSIVVIAWLVGIAALAG 120 Query 153 LAVLDKRLER 162 L V+++RL R Sbjct 121 LTVVERRLAR 130 >gi|120401991|ref|YP_951820.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1] gi|119954809|gb|ABM11814.1| putative conserved transmembrane protein [Mycobacterium vanbaalenii PYR-1] Length=170 Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 100/159 (63%), Positives = 120/159 (76%), Gaps = 0/159 (0%) Query 5 KPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNM 64 K L + L E ++R V R +RI +++ LVTLQSVLLV GAWRND I+R++ Sbjct 9 KALWQYAVPHLYGEPGESRSARVWRRIRIGIVVAACLVTLQSVLLVLGAWRNDRQIERHL 68 Query 65 GVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQ 124 GVA+A VL AG RRSTIEFVTPDRITYRP+LGVLYPSEL GMRIYVEY+ +P+LVRVQ Sbjct 69 GVAEATVLDAGQRRSTIEFVTPDRITYRPELGVLYPSELEDGMRIYVEYDTNNPDLVRVQ 128 Query 125 HRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERR 163 HRNA LAIIPAGSIAVV WL+A AL A++++R RR Sbjct 129 HRNAALAIIPAGSIAVVGWLVAGGALGGTALIERRGRRR 167 >gi|118472595|ref|YP_885504.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118173882|gb|ABK74778.1| probable conserved transmembrane protein [Mycobacterium smegmatis str. MC2 155] Length=163 Score = 190 bits (482), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 96/119 (81%), Positives = 105/119 (89%), Gaps = 0/119 (0%) Query 41 LVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYP 100 LVTLQSVLLV GAWRND I+RNMGVA AEVLSAGPRRSTIEFVTPDR+TYRP+LGVLYP Sbjct 44 LVTLQSVLLVLGAWRNDRQIERNMGVAAAEVLSAGPRRSTIEFVTPDRVTYRPELGVLYP 103 Query 101 SELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKR 159 SEL TGMRIYVEY+K +P LVRV+ RNA LAIIPAGSIAVV W+IA AALV L +L +R Sbjct 104 SELDTGMRIYVEYDKNNPELVRVRDRNAALAIIPAGSIAVVGWMIAGAALVGLWLLQRR 162 >gi|108797731|ref|YP_637928.1| hypothetical protein Mmcs_0752 [Mycobacterium sp. MCS] gi|119866820|ref|YP_936772.1| hypothetical protein Mkms_0766 [Mycobacterium sp. KMS] gi|126433357|ref|YP_001069048.1| hypothetical protein Mjls_0746 [Mycobacterium sp. JLS] gi|108768150|gb|ABG06872.1| putative conserved transmembrane protein [Mycobacterium sp. MCS] gi|119692909|gb|ABL89982.1| putative conserved transmembrane protein [Mycobacterium sp. KMS] gi|126233157|gb|ABN96557.1| putative conserved transmembrane protein [Mycobacterium sp. JLS] Length=170 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 94/122 (78%), Positives = 107/122 (88%), Gaps = 0/122 (0%) Query 41 LVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYP 100 LVTLQS L+V GAWRND I+R+MGVA+A VLSAGPRRSTIEFVTPDRITYRP+LGVLYP Sbjct 44 LVTLQSALMVIGAWRNDRQIERHMGVAEATVLSAGPRRSTIEFVTPDRITYRPELGVLYP 103 Query 101 SELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRL 160 SEL TGMRIYVEY++ +P+LVRV+ R+A LAIIPAGSIAVV WL+A AL+ LAVL KRL Sbjct 104 SELETGMRIYVEYDRNNPDLVRVRDRDASLAIIPAGSIAVVGWLVAGGALIGLAVLQKRL 163 Query 161 ER 162 R Sbjct 164 AR 165 >gi|315442456|ref|YP_004075335.1| hypothetical protein Mspyr1_08010 [Mycobacterium sp. Spyr1] gi|315260759|gb|ADT97500.1| hypothetical protein Mspyr1_08010 [Mycobacterium sp. Spyr1] Length=176 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/158 (66%), Positives = 124/158 (79%), Gaps = 3/158 (1%) Query 5 KPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNM 64 +P L + G DTR V R +RI ++++ LVTLQSVLLV GAWRND I+R++ Sbjct 18 RPYLTAFLFGAGG---DTRRATVFRRIRIGIIVLACLVTLQSVLLVLGAWRNDRQIERHL 74 Query 65 GVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQ 124 GVA+A VL AGPRRSTIEFVTPDRITYRP+LGVLYPSEL GMRIYVEY+ +P+LVRVQ Sbjct 75 GVAEATVLDAGPRRSTIEFVTPDRITYRPELGVLYPSELENGMRIYVEYDVNNPDLVRVQ 134 Query 125 HRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLER 162 HRNA LAIIPAGSIAVV WL+AAAAL A++++R +R Sbjct 135 HRNAALAIIPAGSIAVVGWLVAAAALGATALIERRTQR 172 >gi|145225836|ref|YP_001136514.1| hypothetical protein Mflv_5262 [Mycobacterium gilvum PYR-GCK] gi|145218322|gb|ABP47726.1| hypothetical protein Mflv_5262 [Mycobacterium gilvum PYR-GCK] Length=176 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 103/158 (66%), Positives = 124/158 (79%), Gaps = 3/158 (1%) Query 5 KPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNM 64 +P L + G DTR V R +RI ++++ LVTLQSVLLV GAWRND I+R++ Sbjct 18 RPYLTAFLFGAGG---DTRRAKVFRRIRIGIIVLACLVTLQSVLLVLGAWRNDRQIERHL 74 Query 65 GVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQ 124 GVA+A VL AGPRRSTIEFVTPDRITYRP+LGVLYPSEL GMRIYVEY+ +P+LVRVQ Sbjct 75 GVAEATVLDAGPRRSTIEFVTPDRITYRPELGVLYPSELENGMRIYVEYDVNNPDLVRVQ 134 Query 125 HRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLER 162 HRNA LAIIPAGSIAVV WL+AAAAL A++++R +R Sbjct 135 HRNAALAIIPAGSIAVVGWLVAAAALGATALIERRTQR 172 >gi|169631011|ref|YP_001704660.1| hypothetical protein MAB_3932c [Mycobacterium abscessus ATCC 19977] gi|169242978|emb|CAM64006.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=146 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 98/139 (71%), Positives = 117/139 (85%), Gaps = 1/139 (0%) Query 21 DTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRST 80 + R R++ R +RI VLI+ GL+TLQS+LLVAGAWRND AI+R+MGVA AEVLSAGPRRST Sbjct 2 NRRARVITR-VRIGVLILAGLMTLQSLLLVAGAWRNDKAIERDMGVALAEVLSAGPRRST 60 Query 81 IEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAV 140 IEFVTP+R+TYRP+LGVLYPSELS GMRIYVEY+K +P+LVRVQ RNA L+IIPAGSI V Sbjct 61 IEFVTPERVTYRPELGVLYPSELSPGMRIYVEYDKSNPDLVRVQGRNASLSIIPAGSIIV 120 Query 141 VAWLIAAAALVVLAVLDKR 159 V W + L+ LA L +R Sbjct 121 VVWTVTGTVLLGLAWLRRR 139 >gi|226305194|ref|YP_002765152.1| hypothetical protein RER_17050 [Rhodococcus erythropolis PR4] gi|226184309|dbj|BAH32413.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=147 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/126 (58%), Positives = 93/126 (74%), Gaps = 0/126 (0%) Query 25 RIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFV 84 + VLR LRI VL+V +++ +V+LV GAWRND I+ NMG A AEVLSAG RS I FV Sbjct 3 QTVLRRLRIGVLVVAVGISVLAVILVLGAWRNDRTIESNMGTATAEVLSAGSLRSAISFV 62 Query 85 TPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWL 144 TPD + P+LGVLYP+ L+ G RI VEY+K DP+LVRV RNA +A+IPAGS+ VV WL Sbjct 63 TPDGANHNPELGVLYPTNLTVGQRIEVEYSKADPDLVRVAGRNATVALIPAGSVIVVTWL 122 Query 145 IAAAAL 150 +A ++ Sbjct 123 LAGPSI 128 >gi|296138463|ref|YP_003645706.1| hypothetical protein Tpau_0730 [Tsukamurella paurometabola DSM 20162] gi|296026597|gb|ADG77367.1| hypothetical protein Tpau_0730 [Tsukamurella paurometabola DSM 20162] Length=160 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 75/148 (51%), Positives = 100/148 (68%), Gaps = 7/148 (4%) Query 23 RGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIE 82 R ++VL W A +++TGL V+LV AWR+D +I++N+G AEVLSAGPRRSTI Sbjct 8 RVQLVLLW---AAILITGLC----VVLVLAAWRDDRSIEKNLGATTAEVLSAGPRRSTIS 60 Query 83 FVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVA 142 F TPD + + P LGVLYPS L+ G RI VEYN+ DP LVRV R+A +AI+PA S+A V Sbjct 61 FYTPDGVNHNPPLGVLYPSGLTVGDRIQVEYNRDDPELVRVAGRDAHVAILPAASVACVT 120 Query 143 WLIAAAALVVLAVLDKRLERRENSASAT 170 WL+ + + ++AV +R E AS T Sbjct 121 WLVVGSIMTLIAVTYRRTADEEPDASVT 148 >gi|229490658|ref|ZP_04384496.1| putative conserved transmembrane protein [Rhodococcus erythropolis SK121] gi|229322478|gb|EEN88261.1| putative conserved transmembrane protein [Rhodococcus erythropolis SK121] Length=147 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/126 (57%), Positives = 92/126 (74%), Gaps = 0/126 (0%) Query 25 RIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFV 84 + VLR LRI VL+V +++ +V+LV GAWRND I+ NMG A AEVLSAG RS I FV Sbjct 3 QTVLRRLRIGVLVVAVGISVLAVILVLGAWRNDRTIESNMGTATAEVLSAGSLRSAISFV 62 Query 85 TPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWL 144 TPD + P+LGVLYP+ L+ G RI VEY + +P+LVRV RNA +A+IPAGS+ VV WL Sbjct 63 TPDGANHNPELGVLYPTNLTVGQRIEVEYYRTEPDLVRVAGRNATVALIPAGSVIVVTWL 122 Query 145 IAAAAL 150 +A ++ Sbjct 123 LAGPSI 128 >gi|226361084|ref|YP_002778862.1| hypothetical protein ROP_16700 [Rhodococcus opacus B4] gi|226239569|dbj|BAH49917.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=146 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/128 (56%), Positives = 88/128 (69%), Gaps = 7/128 (5%) Query 42 VTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPS 101 +++ +VLLV AWRND IQ + GVA AEVLSAG RS I FVTPD +T+ P+LGVLYP+ Sbjct 20 ISILAVLLVLAAWRNDHTIQSDRGVATAEVLSAGSLRSAISFVTPDGVTHNPELGVLYPT 79 Query 102 ELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLE 161 L+ G RI VEY + DP+LVRV R+A +A+IPAGS+ VV WLIA L L Sbjct 80 NLTVGQRIDVEYARSDPDLVRVSGRDASVAVIPAGSLIVVTWLIAGPVL-------WYLR 132 Query 162 RRENSASA 169 RRE SA + Sbjct 133 RREMSAES 140 >gi|333918064|ref|YP_004491645.1| hypothetical protein AS9A_0386 [Amycolicicoccus subflavus DQS3-9A1] gi|333480285|gb|AEF38845.1| hypothetical protein AS9A_0386 [Amycolicicoccus subflavus DQS3-9A1] Length=129 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/115 (55%), Positives = 84/115 (74%), Gaps = 0/115 (0%) Query 37 IVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLG 96 +V G +++ +V+LV G WRND+ I+ +MG A AEVL+AG RRS I F TPD I + P+LG Sbjct 3 LVAGGISMLAVILVIGCWRNDMIIEADMGTATAEVLAAGVRRSAILFSTPDGILHNPRLG 62 Query 97 VLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALV 151 VLYP++L+ G RI VEY RDP+LVRV R+A +A++PA S+ VV W AA LV Sbjct 63 VLYPTDLTAGQRIEVEYANRDPDLVRVAGRDAKVAVVPALSVIVVTWAAAAPFLV 117 >gi|325675335|ref|ZP_08155019.1| transmembrane protein [Rhodococcus equi ATCC 33707] gi|325553306|gb|EGD22984.1| transmembrane protein [Rhodococcus equi ATCC 33707] Length=130 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/134 (52%), Positives = 95/134 (71%), Gaps = 4/134 (2%) Query 33 IAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYR 92 ++V++V +++ +VLLV AWRND I+ +MG A AEVLSAG RS + FVTPD +T+ Sbjct 1 MSVVVVAAGISVLAVLLVLAAWRNDRTIESDMGTATAEVLSAGSLRSAVSFVTPDGVTHN 60 Query 93 PQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVV 152 P+LGVLYP+ L+ G RI VEY + +P+LVRV R+A +AI+PAGS+ VV W +A AL+V Sbjct 61 PKLGVLYPTNLTAGQRIDVEYARSEPDLVRVAGRDASVAIVPAGSVIVVTWFVALPALLV 120 Query 153 LAVLDKRLERRENS 166 L +R R E S Sbjct 121 L----RRRARAEGS 130 >gi|111018989|ref|YP_701961.1| hypothetical protein RHA1_ro01996 [Rhodococcus jostii RHA1] gi|110818519|gb|ABG93803.1| possible membrane protein [Rhodococcus jostii RHA1] Length=146 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 64/116 (56%), Positives = 80/116 (69%), Gaps = 7/116 (6%) Query 54 WRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEY 113 WRND IQ + GVA AEVLSAG RS I FVTPD +T+ P+LGVLYP++L+ G RI VEY Sbjct 32 WRNDHTIQSDRGVATAEVLSAGSLRSAISFVTPDGVTHNPELGVLYPTKLTVGQRIDVEY 91 Query 114 NKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASA 169 + DP+LVRV R+A +A++PAGS+ VV WLIA + L RRE+S A Sbjct 92 ARSDPDLVRVSGRDASVAVVPAGSLIVVTWLIAGPVIWY-------LRRRESSPEA 140 >gi|312141028|ref|YP_004008364.1| integral membrane protein [Rhodococcus equi 103S] gi|311890367|emb|CBH49685.1| putative integral membrane protein [Rhodococcus equi 103S] Length=140 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/101 (59%), Positives = 76/101 (76%), Gaps = 0/101 (0%) Query 53 AWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVE 112 AWRND I+ +MG A AEVLSAG RS + FVTPD +T+ P+LGVLYP+ L+ G RI VE Sbjct 31 AWRNDRTIESDMGTATAEVLSAGSLRSAVSFVTPDGVTHNPKLGVLYPTNLTAGQRIDVE 90 Query 113 YNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVL 153 Y + +P+LVRV R+A +AI+PAGS+ VV W +A AL+VL Sbjct 91 YARSEPDLVRVAGRDASVAIVPAGSVIVVTWFVALPALLVL 131 >gi|54027101|ref|YP_121343.1| hypothetical protein nfa51270 [Nocardia farcinica IFM 10152] gi|54018609|dbj|BAD59979.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=143 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 64/119 (54%), Positives = 82/119 (69%), Gaps = 0/119 (0%) Query 28 LRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPD 87 LR RI VL +V++ VLLV AWRND I + GV AEVLSAG RS + +VTPD Sbjct 6 LRRARIGVLTAATVVSVLMVLLVFAAWRNDYLISSDKGVTTAEVLSAGRLRSAVMYVTPD 65 Query 88 RITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIA 146 T+ P++GVLYP+ L+ G RI VEY++ DP+LVRV R+ +AI PA S+ VVAWL+A Sbjct 66 GETHNPKVGVLYPTNLTAGERINVEYSRSDPDLVRVAGRDVRVAIQPALSVIVVAWLLA 124 >gi|262201086|ref|YP_003272294.1| hypothetical protein Gbro_1093 [Gordonia bronchialis DSM 43247] gi|262084433|gb|ACY20401.1| hypothetical protein Gbro_1093 [Gordonia bronchialis DSM 43247] Length=179 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/129 (42%), Positives = 83/129 (65%), Gaps = 0/129 (0%) Query 26 IVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVT 85 +++R ++I +LIV ++T+ +++L+A +RND I + A+V+SA + + F T Sbjct 4 VIVRRVQIGLLIVGTVITVMALVLIAACFRNDATINASKATVMADVVSADALHAEVYFQT 63 Query 86 PDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLI 145 PD Y P LG+LYP+ELS+G RI VEY + +P+L R R+A L+IIP S+AV WLI Sbjct 64 PDGGFYSPNLGLLYPTELSSGQRISVEYARTNPDLARPAGRSATLSIIPGLSVAVAGWLI 123 Query 146 AAAALVVLA 154 +V +A Sbjct 124 VGVLMVFVA 132 >gi|302523869|ref|ZP_07276211.1| predicted protein [Streptomyces sp. AA4] gi|302432764|gb|EFL04580.1| predicted protein [Streptomyces sp. AA4] Length=154 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/137 (42%), Positives = 82/137 (60%), Gaps = 4/137 (2%) Query 33 IAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYR 92 AVL V L+T+ V LV A+RND AI+ ++G A A V S R+ I++ TPD I + Sbjct 14 FAVLGVAVLLTVMCVSLVFAAFRNDSAIEAHLGTANATVESVAFDRTIIQYQTPDGIVHS 73 Query 93 PQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVV 152 P GVLYPS L+ G + +EY+ +P+L RV R A L ++P G ++ WL+A L Sbjct 74 PATGVLYPSGLAAGQLVAIEYDATNPDLTRVAGRTATLTLLPVGMTVLITWLVAGPLLWW 133 Query 153 LAVLDKRLERRENSASA 169 L +RL +R+ SA+A Sbjct 134 L----RRLIKRDRSAAA 146 >gi|326383005|ref|ZP_08204694.1| hypothetical protein SCNU_08711 [Gordonia neofelifaecis NRRL B-59395] gi|326198141|gb|EGD55326.1| hypothetical protein SCNU_08711 [Gordonia neofelifaecis NRRL B-59395] Length=140 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/116 (45%), Positives = 75/116 (65%), Gaps = 1/116 (0%) Query 29 RWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDR 88 R ++IA++ + +VTL +++AGA+RND I N A A+V+SA + + FVTPD Sbjct 3 RRIQIALVALGVIVTLIGAVIIAGAYRNDSKINANKATAVADVISADRLHAAVNFVTPDG 62 Query 89 ITYRPQLGVLYPSELSTGMRIYVEYNKRDP-NLVRVQHRNAGLAIIPAGSIAVVAW 143 + P+LG+LYP+ LSTG RI V+Y+ DP NL R RNA L+I+PA S+ W Sbjct 63 VLRNPKLGLLYPTNLSTGQRILVDYDASDPDNLARPVGRNARLSIVPALSVIAAGW 118 >gi|300782443|ref|YP_003762734.1| hypothetical protein AMED_0512 [Amycolatopsis mediterranei U32] gi|299791957|gb|ADJ42332.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340523812|gb|AEK39017.1| hypothetical protein RAM_02625 [Amycolatopsis mediterranei S699] Length=145 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/138 (41%), Positives = 72/138 (53%), Gaps = 0/138 (0%) Query 22 TRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTI 81 TRG R +L V L+T+ V L+ A RND AI +G A A V S R+ I Sbjct 3 TRGERARRVGWWTILGVASLLTVMCVCLLFAAIRNDSAISAQLGTATATVDSVAFDRTII 62 Query 82 EFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVV 141 F TPD I + P GVLYP L+ G + +EY+ DP L RV R+A L ++P GS Sbjct 63 HFETPDGIVHSPANGVLYPDGLAAGQLVRIEYDASDPELARVAGRSATLTLLPLGSFVFF 122 Query 142 AWLIAAAALVVLAVLDKR 159 WL+A L + DKR Sbjct 123 TWLVAGPGLWWIRRQDKR 140 >gi|257054389|ref|YP_003132221.1| hypothetical protein Svir_03130 [Saccharomonospora viridis DSM 43017] gi|256584261|gb|ACU95394.1| hypothetical protein Svir_03130 [Saccharomonospora viridis DSM 43017] Length=163 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/136 (38%), Positives = 76/136 (56%), Gaps = 0/136 (0%) Query 18 ELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPR 77 + P+TR LR VL V L+TL V+LV GA+RND I N G+A +V Sbjct 11 DTPETRREHALRLGSWVVLGVASLITLLGVVLVLGAFRNDQVIAENRGIATGQVEQVLFD 70 Query 78 RSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGS 137 R+ + + TPD +++ P+ GVLYP L+ G + +EY+ DP L +V R + ++P S Sbjct 71 RTLVRYETPDGVSHSPENGVLYPEGLTAGQLVRIEYDTTDPELAKVAGRTWLVTLLPVAS 130 Query 138 IAVVAWLIAAAALVVL 153 ++ WL+AA L L Sbjct 131 TLLITWLVAAPLLWFL 146 >gi|343925611|ref|ZP_08765128.1| hypothetical protein GOALK_048_00160 [Gordonia alkanivorans NBRC 16433] gi|343764401|dbj|GAA12054.1| hypothetical protein GOALK_048_00160 [Gordonia alkanivorans NBRC 16433] Length=172 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/138 (38%), Positives = 83/138 (61%), Gaps = 0/138 (0%) Query 26 IVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVT 85 ++ R +++ +L+V +T + LVAG ++ND AI+ + AEV+S + ++F T Sbjct 4 VIQRRVQLGLLVVGITITAMAFSLVAGCFKNDSAIEASKATVMAEVVSVDALHAAVDFQT 63 Query 86 PDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLI 145 PD + P+ G+LYP+ELS G RI +EY +P+L R R A L+IIP S+AVV W++ Sbjct 64 PDGSFHSPRFGLLYPTELSEGQRISIEYAAYNPDLARPTGRTAMLSIIPGLSVAVVGWVV 123 Query 146 AAAALVVLAVLDKRLERR 163 +V +A +R RR Sbjct 124 VGLLMVGVAEFSRRRNRR 141 >gi|213964924|ref|ZP_03393123.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213952460|gb|EEB63843.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=163 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/134 (39%), Positives = 78/134 (59%), Gaps = 0/134 (0%) Query 29 RWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDR 88 R+LR +L V + L + +V G + ND I+ NMG + A V S R+T++FV + Sbjct 12 RFLRQVLLFVMICLLLSCLAMVVGCFINDRNIESNMGQSVANVRSVEVLRTTVDFVDENG 71 Query 89 ITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAA 148 P G+LYP L G R+ VEY++ DPN+VRV R L+++PA SIAVVA+++ A Sbjct 72 GFQSPPTGLLYPVGLEEGQRVRVEYDRTDPNVVRVAGRTWTLSLLPAASIAVVAFIVVAP 131 Query 149 ALVVLAVLDKRLER 162 + +RL+R Sbjct 132 LWWLSLRATRRLQR 145 >gi|344045787|gb|EGV41456.1| hypothetical protein CgS9114_01568 [Corynebacterium glutamicum S9114] Length=147 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 50/127 (40%), Positives = 73/127 (58%), Gaps = 4/127 (3%) Query 44 LQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSEL 103 L + +V G + ND I+ N G A A+V + G R+T++F + I + P G+LYP+ L Sbjct 23 LGAASMVIGPFLNDRTIEGNSGRALAQVTNVGSYRTTVDFQDENGIYHSPATGLLYPTGL 82 Query 104 STGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERR 163 G R++V Y K DP+LV+V+ R L+IIPA S+A V A A VL + R RR Sbjct 83 GEGQRVWVNYAKSDPDLVKVEGRKWTLSIIPALSVAAV----ATAIWSVLWLGVGRFGRR 138 Query 164 ENSASAT 170 + A+ T Sbjct 139 SDGANET 145 >gi|300779875|ref|ZP_07089731.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300533985|gb|EFK55044.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length=147 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/127 (41%), Positives = 77/127 (61%), Gaps = 4/127 (3%) Query 44 LQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSEL 103 L SV +VAG ND I R+ G A V S R+++E++ + P G+LYPS L Sbjct 19 LGSVAMVAGPVMNDATISRDPGRGIATVTSVTWLRTSVEYLDETGRVHFPPHGLLYPSGL 78 Query 104 STGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERR 163 G +++V Y K DP++V+V+ R+ LAIIPA S+A+++ LIAAA + ++ R RR Sbjct 79 GEGQQVWVTYAKSDPDIVKVEGRSWPLAIIPALSVALMSTLIAAAGWLAVS----RAGRR 134 Query 164 ENSASAT 170 ENS + T Sbjct 135 ENSPAVT 141 >gi|306835161|ref|ZP_07468198.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|304568950|gb|EFM44478.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length=149 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 54/144 (38%), Positives = 81/144 (57%), Gaps = 0/144 (0%) Query 20 PDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRS 79 P R + R L VL V + + SV LV G + ND AI A A V G R+ Sbjct 3 PRYRPAVFRRRLHQLVLAVYVALIVGSVGLVVGPFLNDRAISAQPSRALATVKDVGALRT 62 Query 80 TIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIA 139 T++F D I + P+ G+LYP++L G +++V+Y + +P+LV+V+ R LA+IPA S+A Sbjct 63 TVDFQDSDGIYHSPRQGLLYPTDLGEGQQVWVQYAEDNPDLVKVEGREWTLAVIPALSVA 122 Query 140 VVAWLIAAAALVVLAVLDKRLERR 163 VV+ L A ++ V +R E R Sbjct 123 VVSTLAAVGLWRLITVTTRRAENR 146 >gi|19551711|ref|NP_599713.1| hypothetical protein NCgl0451 [Corynebacterium glutamicum ATCC 13032] gi|21323233|dbj|BAB97861.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC 13032] Length=147 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 49/127 (39%), Positives = 73/127 (58%), Gaps = 4/127 (3%) Query 44 LQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSEL 103 L + +V G + ND I+ N G A A+V + G R+T++F + I + P G+L+P+ L Sbjct 23 LGAASMVIGPFLNDRTIEGNSGRALAQVTNVGSYRTTVDFQDENGIYHSPATGLLFPTGL 82 Query 104 STGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERR 163 G R++V Y K DP+LV+V+ R L+IIPA S+A V A A VL + R RR Sbjct 83 GEGQRVWVNYAKSDPDLVKVEGRKWTLSIIPALSVAAV----ATATWSVLWLGVGRFGRR 138 Query 164 ENSASAT 170 + A+ T Sbjct 139 SDDANET 145 >gi|145294620|ref|YP_001137441.1| hypothetical protein cgR_0571 [Corynebacterium glutamicum R] gi|140844540|dbj|BAF53539.1| hypothetical protein [Corynebacterium glutamicum R] Length=147 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/127 (40%), Positives = 74/127 (59%), Gaps = 4/127 (3%) Query 44 LQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSEL 103 L + +V G + ND I+ N G A A+V + G R+T++F + I + P G+LYP+ L Sbjct 23 LGAASMVIGPFLNDRTIEGNSGRALAQVTNVGSYRTTVDFQDENGIYHSPATGLLYPTGL 82 Query 104 STGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERR 163 G R++V Y K DP+LV+V+ R L+IIPA S+A VA I + VL + R RR Sbjct 83 GEGQRVWVNYAKSDPDLVKVEGRKWTLSIIPALSVAAVATTIWS----VLWLGVGRFGRR 138 Query 164 ENSASAT 170 + A+ T Sbjct 139 SDDANET 145 >gi|62389366|ref|YP_224768.1| hypothetical protein cg0553 [Corynebacterium glutamicum ATCC 13032] gi|41324700|emb|CAF19182.1| conserved hypothetical membrane protein [Corynebacterium glutamicum ATCC 13032] Length=142 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/127 (39%), Positives = 73/127 (58%), Gaps = 4/127 (3%) Query 44 LQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSEL 103 L + +V G + ND I+ N G A A+V + G R+T++F + I + P G+L+P+ L Sbjct 18 LGAASMVIGPFLNDRTIEGNSGRALAQVTNVGSYRTTVDFQDENGIYHSPATGLLFPTGL 77 Query 104 STGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERR 163 G R++V Y K DP+LV+V+ R L+IIPA S+A V A A VL + R RR Sbjct 78 GEGQRVWVNYAKSDPDLVKVEGRKWTLSIIPALSVAAV----ATATWSVLWLGVGRFGRR 133 Query 164 ENSASAT 170 + A+ T Sbjct 134 SDDANET 140 >gi|237786438|ref|YP_002907143.1| hypothetical protein ckrop_1885 [Corynebacterium kroppenstedtii DSM 44385] gi|237759350|gb|ACR18600.1| hypothetical protein ckrop_1885 [Corynebacterium kroppenstedtii DSM 44385] Length=199 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/162 (35%), Positives = 85/162 (53%), Gaps = 7/162 (4%) Query 4 PKPLLHILIHGLSDELPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRN 63 P+ L G +E DT V R R AV ++ L+TL LVAG NDI + ++ Sbjct 37 PRSPRRTLSRGDDEERIDT----VARRCRQAVALIALLMTLVCATLVAGPVYNDIKLHKD 92 Query 64 MGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRV 123 A A V G R+ I F + P GVLYP L G +++VEY+ P++VRV Sbjct 93 KETAIATVNHVGLLRTAISFRDSSGEFHSPNTGVLYPGGLHDGQKVWVEYSHSHPDIVRV 152 Query 124 QHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERREN 165 Q R L+++PA S +V ++ A +A++++R ER++N Sbjct 153 QGRTWTLSLLPAVSTFIVTVALSMGA---IALINRRAERKKN 191 >gi|38233038|ref|NP_938805.1| hypothetical protein DIP0424 [Corynebacterium diphtheriae NCTC 13129] gi|38199297|emb|CAE48928.1| Putative membrane protein [Corynebacterium diphtheriae] Length=130 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/114 (43%), Positives = 67/114 (59%), Gaps = 0/114 (0%) Query 35 VLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQ 94 VL + L +V G ND I RN G A+VL G R+T+E+ D + + P+ Sbjct 9 VLALYAAAVLGCASMVIGPAINDYHIARNSGRVLAKVLDVGTFRTTVEYQDEDNMYHSPK 68 Query 95 LGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAA 148 G++YP+ L G R++V Y+K +P+LV+V+ R LAIIPA SI VVA LI A Sbjct 69 GGLMYPTGLGRGQRVWVNYSKDNPDLVKVEGRAWTLAIIPALSIWVVASLIFAG 122 >gi|311739259|ref|ZP_07713096.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311305685|gb|EFQ81751.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length=156 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/116 (42%), Positives = 70/116 (61%), Gaps = 0/116 (0%) Query 47 VLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTG 106 V +V G ND AI + A A V G R+T++F + I + PQ G+LYPS L G Sbjct 41 VGMVIGPALNDHAIASHPARALATVKDVGMLRTTVDFQDSEGIYHTPQHGLLYPSGLGEG 100 Query 107 MRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLER 162 +++V+Y + DP+LV+V+ R LAIIPA S+ VVA LIAA +++ +R E+ Sbjct 101 QQVWVQYAQDDPDLVKVEGREWTLAIIPALSVGVVATLIAAVLWKLISFFTRRAEK 156 >gi|227502594|ref|ZP_03932643.1| transmembrane protein [Corynebacterium accolens ATCC 49725] gi|227076634|gb|EEI14597.1| transmembrane protein [Corynebacterium accolens ATCC 49725] Length=153 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Query 20 PDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRS 79 P R + R L VL V + + SV LV G + ND AI A A V G R+ Sbjct 3 PRYRPAVFRRRLHQLVLAVYVALIVGSVGLVVGPFLNDRAISAQPSRALATVKDVGALRT 62 Query 80 TIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIA 139 T++F D I + P+ G+LYP++L G +++V+Y + +P+LV+V+ R LA+IPA S+A Sbjct 63 TVDFQDSDGIYHSPRQGLLYPTDLGEGQQVWVQYAEDNPDLVKVEGREWTLAVIPALSVA 122 Query 140 VVAWLIAAAALVVLAVLDKRLER-RENSAS 168 +V+ L A ++ + +R E+ EN A Sbjct 123 IVSTLAAVGLWRLINLTTRRAEKPAENRAE 152 >gi|255324685|ref|ZP_05365799.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|255298160|gb|EET77463.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] Length=156 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/116 (41%), Positives = 69/116 (60%), Gaps = 0/116 (0%) Query 47 VLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTG 106 V +V G ND AI + A A V G R+T++F + I + PQ G+LYPS L G Sbjct 41 VGMVIGPALNDHAIASHPARALATVKDVGMLRTTVDFQDSEGIYHTPQHGLLYPSGLGEG 100 Query 107 MRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLER 162 +++V+Y + DP+LV+V+ R LAIIPA S+ VVA LI A +++ +R E+ Sbjct 101 QQVWVQYAQDDPDLVKVEGREWTLAIIPALSVGVVATLITAVLWKLISFFTRRAEK 156 >gi|227505149|ref|ZP_03935198.1| transmembrane protein [Corynebacterium striatum ATCC 6940] gi|227198262|gb|EEI78310.1| transmembrane protein [Corynebacterium striatum ATCC 6940] Length=173 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 45/115 (40%), Positives = 70/115 (61%), Gaps = 0/115 (0%) Query 49 LVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQLGVLYPSELSTGMR 108 ++ GA+ ND +I+ N G A A V G R++++F I + PQ G+LYP+ L G + Sbjct 38 MIVGAFLNDRSIESNPGRALATVTDVGITRTSVDFQDNKGIYHSPQSGLLYPTGLGEGQQ 97 Query 109 IYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERR 163 ++V Y++ +P+LV+V+ R L++IPA S VA LIAA A + V + ERR Sbjct 98 VWVLYSRANPDLVKVEGREWTLSLIPALSSMFVASLIAAGAWWTVGVSTRAAERR 152 >gi|227549788|ref|ZP_03979837.1| transmembrane protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078134|gb|EEI16097.1| transmembrane protein [Corynebacterium lipophiloflavum DSM 44291] Length=145 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 49/129 (38%), Positives = 72/129 (56%), Gaps = 0/129 (0%) Query 35 VLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRRSTIEFVTPDRITYRPQ 94 V+ + L V ++AG ND I ++ G A V G R+++E+ + P+ Sbjct 14 VIALYACAMLGVVAMIAGPALNDARIMQSPGRGMATVTEVGMLRTSVEYQDEQGRYHSPR 73 Query 95 LGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSIAVVAWLIAAAALVVLA 154 G+LYPS L G R++V Y+ DP LV+V+ R LAIIPA S+AVV+ L+AAAAL + Sbjct 74 YGLLYPSGLGEGQRVWVTYSTADPGLVKVEGRGWTLAIIPALSVAVVSTLVAAAALYGVG 133 Query 155 VLDKRLERR 163 R E + Sbjct 134 AACGRREAK 142 >gi|337289964|ref|YP_004628985.1| hypothetical protein CULC22_00348 [Corynebacterium ulcerans BR-AD22] gi|334696087|gb|AEG80884.1| putative secreted protein [Corynebacterium ulcerans 809] gi|334698270|gb|AEG83066.1| putative secreted protein [Corynebacterium ulcerans BR-AD22] Length=151 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/130 (39%), Positives = 72/130 (56%), Gaps = 0/130 (0%) Query 19 LPDTRGRIVLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGPRR 78 LP + R L AVL + T+ +V G ND I ++ G A+V+ G R Sbjct 4 LPHYPPSSIRRRLHQAVLALFAAATIGCFSMVIGPALNDREIAKSPGSTLAKVIDVGTFR 63 Query 79 STIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHRNAGLAIIPAGSI 138 ST+E+ D + + P+ G+LYP+ L G R++V Y K +P+LV+VQ R LA+IPA S Sbjct 64 STVEYQDEDGVYHSPRGGLLYPTGLGKGQRVWVTYAKSNPDLVKVQGRGWTLALIPALST 123 Query 139 AVVAWLIAAA 148 VV+ IA A Sbjct 124 WVVSLAIAVA 133 Lambda K H 0.323 0.138 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 136720389372 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40