BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0558

Length=234
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|31791740|ref|NP_854233.1|  ubiquinone/menaquinone biosynthesis...   475    3e-132
gi|167968369|ref|ZP_02550646.1|  ubiquinone/menaquinone biosynthe...   473    1e-131
gi|340625585|ref|YP_004744037.1|  putative ubiquinone/menaquinone...   472    2e-131
gi|13880096|gb|AAK44807.1|  ubiquinone/menaquinone biosynthesis m...   446    1e-123
gi|342858931|ref|ZP_08715585.1|  ubiquinone/menaquinone biosynthe...   426    1e-117
gi|183980928|ref|YP_001849219.1|  ubiquinone/menaquinone methlytr...   419    2e-115
gi|296168324|ref|ZP_06850248.1|  ubiquinone/menaquinone biosynthe...   419    2e-115
gi|118616463|ref|YP_904795.1|  ubiquinone/menaquinone biosynthesi...   417    9e-115
gi|161611201|ref|NP_962989.2|  ubiquinone/menaquinone biosynthesi...   416    2e-114
gi|336460468|gb|EGO39363.1|  ubiquinone/menaquinone biosynthesis ...   416    2e-114
gi|41398986|gb|AAS06605.1|  UbiE [Mycobacterium avium subsp. para...   414    7e-114
gi|240169238|ref|ZP_04747897.1|  ubiquinone/menaquinone biosynthe...   413    1e-113
gi|118463483|ref|YP_883713.1|  ubiquinone/menaquinone biosynthesi...   413    1e-113
gi|254818360|ref|ZP_05223361.1|  ubiquinone/menaquinone biosynthe...   409    2e-112
gi|289568486|ref|ZP_06448713.1|  ubiquinone/menaquinone biosynthe...   396    1e-108
gi|118470851|ref|YP_885509.1|  ubiquinone/menaquinone biosynthesi...   389    1e-106
gi|161723263|ref|NP_302480.2|  ubiquinone/menaquinone biosynthesi...   388    3e-106
gi|221230694|ref|YP_002504110.1|  ubiquinone/menaquinone biosynth...   386    2e-105
gi|120401998|ref|YP_951827.1|  ubiquinone/menaquinone biosynthesi...   381    4e-104
gi|145225832|ref|YP_001136510.1|  ubiquinone/menaquinone biosynth...   377    7e-103
gi|315442460|ref|YP_004075339.1|  demethylmenaquinone methyltrans...   377    1e-102
gi|126433368|ref|YP_001069059.1|  ubiquinone/menaquinone biosynth...   371    4e-101
gi|333989192|ref|YP_004521806.1|  ubiquinone/menaquinone methyltr...   371    4e-101
gi|108797742|ref|YP_637939.1|  ubiquinone/menaquinone biosynthesi...   370    1e-100
gi|169631009|ref|YP_001704658.1|  ubiquinone/menaquinone biosynth...   363    1e-98 
gi|54027103|ref|YP_121345.1|  ubiquinone/menaquinone biosynthesis...   335    4e-90 
gi|111018986|ref|YP_701958.1|  ubiquinone/menaquinone biosynthesi...   332    4e-89 
gi|226361081|ref|YP_002778859.1|  ubiquinone/menaquinone biosynth...   330    8e-89 
gi|333918066|ref|YP_004491647.1|  Menaquinone biosynthesis methyl...   330    8e-89 
gi|312141026|ref|YP_004008362.1|  2-octaprenyl-6-methoxy-1,4-benz...   327    1e-87 
gi|226305196|ref|YP_002765154.1|  menaquinone biosynthesis methyl...   326    1e-87 
gi|145294623|ref|YP_001137444.1|  ubiquinone/menaquinone biosynth...   324    5e-87 
gi|227502596|ref|ZP_03932645.1|  ubiquinone/menaquinone biosynthe...   324    7e-87 
gi|255324687|ref|ZP_05365801.1|  menaquinone biosynthesis methylt...   323    9e-87 
gi|227505151|ref|ZP_03935200.1|  ubiquinone/menaquinone biosynthe...   323    9e-87 
gi|324997730|ref|ZP_08118842.1|  ubiquinone/menaquinone biosynthe...   323    1e-86 
gi|19551714|ref|NP_599716.1|  ubiquinone/menaquinone biosynthesis...   322    2e-86 
gi|296119173|ref|ZP_06837743.1|  ubiquinone/menaquinone biosynthe...   321    7e-86 
gi|340795374|ref|YP_004760837.1|  ubiquinone/menaquinone biosynth...   320    1e-85 
gi|334696089|gb|AEG80886.1|  ubiquinone/menaquinone biosynthesis ...   320    2e-85 
gi|337289966|ref|YP_004628987.1|  ubiquinone/menaquinone biosynth...   319    2e-85 
gi|227832178|ref|YP_002833885.1|  ubiquinone/menaquinone biosynth...   319    2e-85 
gi|161485998|ref|NP_737091.2|  ubiquinone/menaquinone biosynthesi...   318    6e-85 
gi|300857716|ref|YP_003782699.1|  ubiquinone/menaquinone biosynth...   316    1e-84 
gi|341824119|gb|AEK91640.1|  Ubiquinone/menaquinone biosynthesis ...   315    3e-84 
gi|23492317|dbj|BAC17291.1|  putative methyltransferase [Coryneba...   314    8e-84 
gi|238062208|ref|ZP_04606917.1|  ubiquinone/menaquinone biosynthe...   313    1e-83 
gi|336326469|ref|YP_004606435.1|  ubiquinone/menaquinone biosynth...   313    1e-83 
gi|291004449|ref|ZP_06562422.1|  ubiquinone/menaquinone biosynthe...   310    1e-82 
gi|213964999|ref|ZP_03393198.1|  menaquinone biosynthesis methylt...   310    1e-82 


>gi|31791740|ref|NP_854233.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
bovis AF2122/97]
 gi|57116754|ref|YP_177738.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
tuberculosis H37Rv]
 gi|121636476|ref|YP_976699.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
bovis BCG str. Pasteur 1173P2]
 77 more sequence titles
 Length=234

 Score =  475 bits (1222),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 234/234 (100%), Positives = 234/234 (100%), Gaps = 0/234 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL
Sbjct  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE
Sbjct  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ  234
            AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ
Sbjct  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ  234


>gi|167968369|ref|ZP_02550646.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
tuberculosis H37Ra]
Length=234

 Score =  473 bits (1217),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 233/234 (99%), Positives = 233/234 (99%), Gaps = 0/234 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVP VAGDATRLPFGDDVFDAVTISFGL
Sbjct  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPNVAGDATRLPFGDDVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE
Sbjct  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ  234
            AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ
Sbjct  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ  234


>gi|340625585|ref|YP_004744037.1| putative ubiquinone/menaquinone biosynthesis methyltransferase 
MENH [Mycobacterium canettii CIPT 140010059]
 gi|340003775|emb|CCC42901.1| putative ubiquinone/menaquinone biosynthesis methyltransferase 
MENH (2-heptaprenyl-1,4-naphthoquinone methyltransferase) 
[Mycobacterium canettii CIPT 140010059]
Length=234

 Score =  472 bits (1214),  Expect = 2e-131, Method: Compositional matrix adjust.
 Identities = 232/234 (99%), Positives = 234/234 (100%), Gaps = 0/234 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRAALDKDPRDVASMF+GVAR+YDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct  1    MSRAALDKDPRDVASMFNGVARRYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL
Sbjct  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE
Sbjct  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ  234
            AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ
Sbjct  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ  234


>gi|13880096|gb|AAK44807.1| ubiquinone/menaquinone biosynthesis methlytransferase [Mycobacterium 
tuberculosis CDC1551]
Length=219

 Score =  446 bits (1147),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 219/219 (100%), Positives = 219/219 (100%), Gaps = 0/219 (0%)

Query  16   MFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGTAVSTVELTKSGAW  75
            MFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGTAVSTVELTKSGAW
Sbjct  1    MFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGTAVSTVELTKSGAW  60

Query  76   CVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRNVANQQAALREMAR  135
            CVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRNVANQQAALREMAR
Sbjct  61   CVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRNVANQQAALREMAR  120

Query  136  VTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAYEYLAESIRAWPDQ  195
            VTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAYEYLAESIRAWPDQ
Sbjct  121  VTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAYEYLAESIRAWPDQ  180

Query  196  AVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ  234
            AVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ
Sbjct  181  AVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ  219


>gi|342858931|ref|ZP_08715585.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
colombiense CECT 3035]
 gi|342133172|gb|EGT86375.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
colombiense CECT 3035]
Length=230

 Score =  426 bits (1095),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 208/228 (92%), Positives = 217/228 (96%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA LDKDPRDVASMFDGVAR+YDLTNTVLS+GQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct  1    MSRAELDKDPRDVASMFDGVARRYDLTNTVLSMGQDRYWRKATRSALDIGPGQKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR VPKVAGDATRLPFGDDVFDAVTISFGL
Sbjct  61   GTAVSTVELQKSGAWCVAADFSVGMLAAGAARDVPKVAGDATRLPFGDDVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QA LREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNPE
Sbjct  121  RNVVDTQAGLREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQA LA QI++AGWSGVRWRNLTGGIVALHAG+KP
Sbjct  181  AYVYLAESIRAWPDQAALAQQITQAGWSGVRWRNLTGGIVALHAGHKP  228


>gi|183980928|ref|YP_001849219.1| ubiquinone/menaquinone methlytransferase, MenH [Mycobacterium 
marinum M]
 gi|254789947|sp|B2HRQ2.1|UBIE_MYCMM RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|183174254|gb|ACC39364.1| ubiquinone/menaquinone methlytransferase, MenH [Mycobacterium 
marinum M]
Length=231

 Score =  419 bits (1077),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 208/228 (92%), Positives = 213/228 (94%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRAALDKDPRDVASMFDGVAR+YDLTNTVLSLGQDRYWRRATRSALRIGPG KVLDLAA
Sbjct  1    MSRAALDKDPRDVASMFDGVARRYDLTNTVLSLGQDRYWRRATRSALRIGPGDKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAG  RKV KVAGDATRLPF DDVFDAVTISFGL
Sbjct  61   GTAVSTVELAKSGAWCVAADFSVGMLAAGHERKVCKVAGDATRLPFADDVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +  AALREMARVTRPGGRL+VCEFSTP +ALFAT YKEYLMRALPRVARAVSSNPE
Sbjct  121  RNVVDFSAALREMARVTRPGGRLVVCEFSTPVSALFATVYKEYLMRALPRVARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQA LA Q+SRAGWS VRWRNLTGGIVALHAGYKP
Sbjct  181  AYVYLAESIRAWPDQAALAQQMSRAGWSAVRWRNLTGGIVALHAGYKP  228


>gi|296168324|ref|ZP_06850248.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Mycobacterium 
parascrofulaceum ATCC BAA-614]
 gi|295896755|gb|EFG76388.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Mycobacterium 
parascrofulaceum ATCC BAA-614]
Length=230

 Score =  419 bits (1076),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 208/228 (92%), Positives = 213/228 (94%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRAALDKDPRDVASMFDGVAR+YDLTNTVLSLGQDR+WRRATRSAL IGPG KVLDLAA
Sbjct  1    MSRAALDKDPRDVASMFDGVARRYDLTNTVLSLGQDRFWRRATRSALTIGPGHKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR VPKV  DATRLPFGD VFDAVTISFGL
Sbjct  61   GTAVSTVELQKSGAWCVAADFSVGMLAAGAARNVPKVGADATRLPFGDGVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV N QAALREMARVTRPGGRL+VCEFSTPTNALFATAYKEYLMRALPRVARAVSSNP+
Sbjct  121  RNVVNPQAALREMARVTRPGGRLVVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQ  LA  ISRAGW+ VRWRNLTGGIVALHAGYKP
Sbjct  181  AYVYLAESIRAWPDQEGLARDISRAGWAAVRWRNLTGGIVALHAGYKP  228


>gi|118616463|ref|YP_904795.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
ulcerans Agy99]
 gi|166234731|sp|A0PLV5.1|UBIE_MYCUA RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|118568573|gb|ABL03324.1| ubiquinone/menaquinone methlytransferase, MenH [Mycobacterium 
ulcerans Agy99]
Length=231

 Score =  417 bits (1071),  Expect = 9e-115, Method: Compositional matrix adjust.
 Identities = 206/228 (91%), Positives = 213/228 (94%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRAALDKDPRDVASMFDGVAR+YDLTNTVLSLGQDRYWRRATRSALRIGPG KVLDLAA
Sbjct  1    MSRAALDKDPRDVASMFDGVARRYDLTNTVLSLGQDRYWRRATRSALRIGPGDKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVS+VEL KSGAWCVAADFSVGMLAAG  R+V KVAGDATRLPF DDVFDAVTISFGL
Sbjct  61   GTAVSSVELAKSGAWCVAADFSVGMLAAGHERRVCKVAGDATRLPFADDVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +  AALREMARVTRPGGRL+VCEFSTP +ALFAT YKEYLMRALPRVARAVSSNPE
Sbjct  121  RNVVDFSAALREMARVTRPGGRLVVCEFSTPVSALFATVYKEYLMRALPRVARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQA LA Q+SRAGWS VRWRNLTGGIVALHAGYKP
Sbjct  181  AYVYLAESIRAWPDQAALAQQMSRAGWSAVRWRNLTGGIVALHAGYKP  228


>gi|161611201|ref|NP_962989.2| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
avium subsp. paratuberculosis K-10]
 gi|254777016|ref|ZP_05218532.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
avium subsp. avium ATCC 25291]
 gi|61217303|sp|Q73SL8.2|UBIE_MYCPA RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
Length=230

 Score =  416 bits (1069),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 204/228 (90%), Positives = 216/228 (95%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA LDK+PRDVASMFDGVAR+YDLTNTVLSLGQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct  1    MSRAELDKNPRDVASMFDGVARRYDLTNTVLSLGQDRYWRKATRSALGIGPGQKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR+VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct  61   GTAVSTVELNKSGAWCVAADFSVGMLAAGAARRVPKVAGDATRLPFADDVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QAALREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNP+
Sbjct  121  RNVVDTQAALREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQA LA QI+ AGW+GVRWRNLTGGIVALHA ++P
Sbjct  181  AYVYLAESIRAWPDQAALADQIAGAGWAGVRWRNLTGGIVALHAAHRP  228


>gi|336460468|gb|EGO39363.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
avium subsp. paratuberculosis S397]
Length=296

 Score =  416 bits (1068),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 203/228 (90%), Positives = 216/228 (95%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            +SRA LDK+PRDVASMFDGVAR+YDLTNTVLSLGQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct  67   VSRAELDKNPRDVASMFDGVARRYDLTNTVLSLGQDRYWRKATRSALGIGPGQKVLDLAA  126

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR+VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct  127  GTAVSTVELNKSGAWCVAADFSVGMLAAGAARRVPKVAGDATRLPFADDVFDAVTISFGL  186

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QAALREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNP+
Sbjct  187  RNVVDTQAALREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPD  246

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQA LA QI+ AGW+GVRWRNLTGGIVALHA ++P
Sbjct  247  AYVYLAESIRAWPDQAALADQIAGAGWAGVRWRNLTGGIVALHAAHRP  294


>gi|41398986|gb|AAS06605.1| UbiE [Mycobacterium avium subsp. paratuberculosis K-10]
Length=261

 Score =  414 bits (1063),  Expect = 7e-114, Method: Compositional matrix adjust.
 Identities = 203/228 (90%), Positives = 216/228 (95%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            +SRA LDK+PRDVASMFDGVAR+YDLTNTVLSLGQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct  32   VSRAELDKNPRDVASMFDGVARRYDLTNTVLSLGQDRYWRKATRSALGIGPGQKVLDLAA  91

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR+VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct  92   GTAVSTVELNKSGAWCVAADFSVGMLAAGAARRVPKVAGDATRLPFADDVFDAVTISFGL  151

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QAALREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNP+
Sbjct  152  RNVVDTQAALREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPD  211

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQA LA QI+ AGW+GVRWRNLTGGIVALHA ++P
Sbjct  212  AYVYLAESIRAWPDQAALADQIAGAGWAGVRWRNLTGGIVALHAAHRP  259


>gi|240169238|ref|ZP_04747897.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
kansasii ATCC 12478]
Length=232

 Score =  413 bits (1061),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 205/230 (90%), Positives = 216/230 (94%), Gaps = 0/230 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRAALDK+PRDVASMFDGVAR+YDLTNTVLS+G+DRYWRRATRSALRIGPG  VLDLAA
Sbjct  1    MSRAALDKNPRDVASMFDGVARRYDLTNTVLSVGRDRYWRRATRSALRIGPGDTVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAG ARKVPKVAGDATRLPF D VFDAVTISFGL
Sbjct  61   GTAVSTVELAKSGAWCVAADFSVGMLAAGGARKVPKVAGDATRLPFADGVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNVA+  AALREMARVTRPGG+L+VCEF+TPT+ALFAT YKEYLMRALPRVARAVSSNP+
Sbjct  121  RNVADFPAALREMARVTRPGGQLVVCEFATPTSALFATVYKEYLMRALPRVARAVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGK  230
            AY YLAESIRAWPDQA LA  ISRAGWS VRWRNLTGGIVALHAGYKPG+
Sbjct  181  AYVYLAESIRAWPDQASLAGHISRAGWSAVRWRNLTGGIVALHAGYKPGE  230


>gi|118463483|ref|YP_883713.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
avium 104]
 gi|118164770|gb|ABK65667.1| menaquinone biosynthesis methyltransferase UbiE [Mycobacterium 
avium 104]
Length=247

 Score =  413 bits (1061),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 203/228 (90%), Positives = 216/228 (95%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            +SRA LDK+PRDVASMFDGVAR+YDLTNTVLSLGQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct  18   VSRAELDKNPRDVASMFDGVARRYDLTNTVLSLGQDRYWRKATRSALGIGPGQKVLDLAA  77

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR+VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct  78   GTAVSTVELNKSGAWCVAADFSVGMLAAGAARRVPKVAGDATRLPFADDVFDAVTISFGL  137

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QAALREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNP+
Sbjct  138  RNVVDTQAALREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPD  197

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQA LA QI+ AGW+GVRWRNLTGGIVALHA ++P
Sbjct  198  AYVYLAESIRAWPDQAALADQIAGAGWAGVRWRNLTGGIVALHAAHRP  245


>gi|254818360|ref|ZP_05223361.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
intracellulare ATCC 13950]
Length=230

 Score =  409 bits (1050),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 200/228 (88%), Positives = 212/228 (93%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA LDKDPRDVASMFDGVAR+YDLTNTVLS+GQDR+WR+ATR+AL IGPGQ+VLDLAA
Sbjct  1    MSRAELDKDPRDVASMFDGVARRYDLTNTVLSMGQDRHWRKATRAALEIGPGQRVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct  61   GTAVSTVELKKSGAWCVAADFSVGMLAAGAARHVPKVAGDATRLPFADDVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QAALREMARVTRPGGRL+VCEFSTPTN LFAT YKEYLMRALPRVARAVSSNPE
Sbjct  121  RNVVDTQAALREMARVTRPGGRLVVCEFSTPTNGLFATVYKEYLMRALPRVARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAW DQ  LA Q+++AGW GVRWRNLTGGIVALHAG+ P
Sbjct  181  AYVYLAESIRAWRDQEGLAQQLTQAGWVGVRWRNLTGGIVALHAGHLP  228


>gi|289568486|ref|ZP_06448713.1| ubiquinone/menaquinone biosynthesis methyltransferase menH [Mycobacterium 
tuberculosis T17]
 gi|289542240|gb|EFD45888.1| ubiquinone/menaquinone biosynthesis methyltransferase menH [Mycobacterium 
tuberculosis T17]
Length=251

 Score =  396 bits (1018),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 198/198 (100%), Positives = 198/198 (100%), Gaps = 0/198 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct  37   MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  96

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL
Sbjct  97   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  156

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE
Sbjct  157  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  216

Query  181  AYEYLAESIRAWPDQAVL  198
            AYEYLAESIRAWPDQAVL
Sbjct  217  AYEYLAESIRAWPDQAVL  234


>gi|118470851|ref|YP_885509.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
smegmatis str. MC2 155]
 gi|166234727|sp|A0QRH1.1|UBIE_MYCS2 RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|118172138|gb|ABK73034.1| menaquinone biosynthesis methyltransferase UbiE [Mycobacterium 
smegmatis str. MC2 155]
Length=229

 Score =  389 bits (1000),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 188/228 (83%), Positives = 205/228 (90%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA+L+K+P DVASMFD VA++YDLTNTVLSLGQDR+WRR T+SALRIGP  KVLDLAA
Sbjct  1    MSRASLEKNPHDVASMFDAVAKRYDLTNTVLSLGQDRFWRRETKSALRIGPADKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAGA+R+VPKVAGDATRLPF D+VFDAVTISFGL
Sbjct  61   GTAVSTVELAKSGAWCVAADFSVGMLAAGASRQVPKVAGDATRLPFADEVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + +A LREMARVT+PGGRL+VCEFSTPTN LF+T YKEYLM+ALP +A AVSSNPE
Sbjct  121  RNVVDHKAGLREMARVTKPGGRLVVCEFSTPTNRLFSTVYKEYLMKALPAMATAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWP QA LA QI  AGWS VRWRNLTGGIVALHA  KP
Sbjct  181  AYVYLAESIRAWPTQAELARQIGEAGWSDVRWRNLTGGIVALHAATKP  228


>gi|161723263|ref|NP_302480.2| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
leprae TN]
 gi|48474633|sp|Q9CBA8.2|UBIE_MYCLE RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
Length=230

 Score =  388 bits (997),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 191/228 (84%), Positives = 203/228 (90%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRAALDKDPRDV +MFD VA +YDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct  1    MSRAALDKDPRDVVAMFDDVAHRYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVST EL+KSGAWCVAADFSV MLA G ARKVPKVA DAT+LPF D VFDAVTISFGL
Sbjct  61   GTAVSTAELSKSGAWCVAADFSVRMLATGGARKVPKVAADATQLPFSDGVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+A+ QAALREMARVTRPGG+L+VCEFSTPTNAL A  Y EYLMRALP+VAR VSSNP+
Sbjct  121  RNIADYQAALREMARVTRPGGQLVVCEFSTPTNALVANVYTEYLMRALPQVARLVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQ  LA Q+SR GW+  RWRNLTGGIVALHA  KP
Sbjct  181  AYIYLAESIRAWPDQVTLACQLSRTGWASPRWRNLTGGIVALHAADKP  228


>gi|221230694|ref|YP_002504110.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
leprae Br4923]
 gi|13093910|emb|CAC31789.1| putative ubiquinone/menaquinone biosynthesis methyltransferase 
[Mycobacterium leprae]
 gi|219933801|emb|CAR72371.1| putative ubiquinone/menaquinone biosynthesis methyltransferase 
[Mycobacterium leprae Br4923]
Length=238

 Score =  386 bits (991),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 190/228 (84%), Positives = 203/228 (90%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            +SRAALDKDPRDV +MFD VA +YDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct  9    VSRAALDKDPRDVVAMFDDVAHRYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  68

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVST EL+KSGAWCVAADFSV MLA G ARKVPKVA DAT+LPF D VFDAVTISFGL
Sbjct  69   GTAVSTAELSKSGAWCVAADFSVRMLATGGARKVPKVAADATQLPFSDGVFDAVTISFGL  128

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+A+ QAALREMARVTRPGG+L+VCEFSTPTNAL A  Y EYLMRALP+VAR VSSNP+
Sbjct  129  RNIADYQAALREMARVTRPGGQLVVCEFSTPTNALVANVYTEYLMRALPQVARLVSSNPD  188

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQ  LA Q+SR GW+  RWRNLTGGIVALHA  KP
Sbjct  189  AYIYLAESIRAWPDQVTLACQLSRTGWASPRWRNLTGGIVALHAADKP  236


>gi|120401998|ref|YP_951827.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
vanbaalenii PYR-1]
 gi|166234732|sp|A1T3S1.1|UBIE_MYCVP RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|119954816|gb|ABM11821.1| demethylmenaquinone methyltransferase [Mycobacterium vanbaalenii 
PYR-1]
Length=228

 Score =  381 bits (979),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 188/227 (83%), Positives = 201/227 (89%), Gaps = 0/227 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M+RA+L+KDP +VASMFDGVAR+YDLTNTVLSLGQDR+WRRATR AL++ P  KVLDLAA
Sbjct  1    MNRASLEKDPHEVASMFDGVARRYDLTNTVLSLGQDRFWRRATREALQLSPSDKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL  SGAWCVAADFSVGMLAAGAAR VPKVAGDATRLPF D VFDAVTISFGL
Sbjct  61   GTAVSTVELAGSGAWCVAADFSVGMLAAGAARDVPKVAGDATRLPFADGVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +  A LREMARVTRPGGRL+VCEFSTPTN LFAT YKEYLMRALP +A AVSSNP+
Sbjct  121  RNVVDHSAGLREMARVTRPGGRLVVCEFSTPTNKLFATVYKEYLMRALPAMASAVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYK  227
            AY YLAESIRAWPDQA LA +I  AGWS VRWRNLTGGIVALHA  K
Sbjct  181  AYVYLAESIRAWPDQAELAARIEAAGWSDVRWRNLTGGIVALHAATK  227


>gi|145225832|ref|YP_001136510.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
gilvum PYR-GCK]
 gi|189037024|sp|A4T183.1|UBIE_MYCGI RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|145218318|gb|ABP47722.1| demethylmenaquinone methyltransferase [Mycobacterium gilvum PYR-GCK]
Length=228

 Score =  377 bits (968),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 184/228 (81%), Positives = 202/228 (89%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M+RA+L+K+P +VASMFDGVAR+YDLTNTVLSLGQDR+WRRATR AL++ P  KVLDLAA
Sbjct  1    MNRASLEKNPHEVASMFDGVARRYDLTNTVLSLGQDRFWRRATREALQLSPADKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL  SGAWCVAADFSVGMLAAGA+R+VPKVAGDATRLPF D VFDAVTISFGL
Sbjct  61   GTAVSTVELASSGAWCVAADFSVGMLAAGASRRVPKVAGDATRLPFDDGVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +  A LREMARVTRPGGRL+VCEFSTPTN LF+T YKEYLM+ALP +A AVSSNP+
Sbjct  121  RNVVDFSAGLREMARVTRPGGRLVVCEFSTPTNGLFSTVYKEYLMKALPAMATAVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQ  LA +I  AGWS VRWRNLTGGIVALHA  KP
Sbjct  181  AYVYLAESIRAWPDQRALARRIEAAGWSDVRWRNLTGGIVALHAATKP  228


>gi|315442460|ref|YP_004075339.1| demethylmenaquinone methyltransferase [Mycobacterium sp. Spyr1]
 gi|315260763|gb|ADT97504.1| demethylmenaquinone methyltransferase [Mycobacterium sp. Spyr1]
Length=228

 Score =  377 bits (967),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 183/228 (81%), Positives = 202/228 (89%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M+RA+L+K+P +VASMFDGVAR+YDLTNTVLSLGQDR+WRRATR AL++ P  KVLDLAA
Sbjct  1    MNRASLEKNPHEVASMFDGVARRYDLTNTVLSLGQDRFWRRATREALQLSPADKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL  SGAWCVAADFSVGMLAAGA+R+VPKVAGDATRLPF D VFDAVTISFGL
Sbjct  61   GTAVSTVELASSGAWCVAADFSVGMLAAGASRRVPKVAGDATRLPFDDGVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +  A LREMARVTRPGGRL+VCEFSTPTN +F+T YKEYLM+ALP +A AVSSNP+
Sbjct  121  RNVVDFSAGLREMARVTRPGGRLVVCEFSTPTNGMFSTVYKEYLMKALPAMATAVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQ  LA +I  AGWS VRWRNLTGGIVALHA  KP
Sbjct  181  AYVYLAESIRAWPDQRALARRIEAAGWSDVRWRNLTGGIVALHAATKP  228


>gi|126433368|ref|YP_001069059.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
sp. JLS]
 gi|166234728|sp|A3PUJ1.1|UBIE_MYCSJ RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|126233168|gb|ABN96568.1| demethylmenaquinone methyltransferase [Mycobacterium sp. JLS]
Length=230

 Score =  371 bits (953),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 184/228 (81%), Positives = 198/228 (87%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA LDK+P +VASMFD VAR+YDLTNTVLSLGQDR+WRR T +AL IGPG KVLDLAA
Sbjct  1    MSRATLDKNPHEVASMFDAVARRYDLTNTVLSLGQDRFWRRETCAALGIGPGDKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL  SGAWCVAADFSVGML+AG  R VPKVAGDATRLPF D+ FDAVTISFGL
Sbjct  61   GTAVSTVELAASGAWCVAADFSVGMLSAGRQRDVPKVAGDATRLPFADESFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +  A L EMARVTRPGGRL+VCEFSTPTN  FAT YKEYLM+ALPR+ARAV+SNP+
Sbjct  121  RNVVDHVAGLEEMARVTRPGGRLVVCEFSTPTNRAFATLYKEYLMKALPRMARAVASNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQA LA +I  AGWS VRWRNLTGGIVALHA  KP
Sbjct  181  AYVYLAESIRAWPDQAGLARRIEAAGWSQVRWRNLTGGIVALHAAVKP  228


>gi|333989192|ref|YP_004521806.1| ubiquinone/menaquinone methyltransferase MenH [Mycobacterium 
sp. JDM601]
 gi|333485160|gb|AEF34552.1| ubiquinone/menaquinone methyltransferase MenH [Mycobacterium 
sp. JDM601]
Length=230

 Score =  371 bits (953),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 185/227 (82%), Positives = 199/227 (88%), Gaps = 0/227 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA+LDKDP  VA+MFDGVAR+YDLTNTV+SLG+DR WRRATR AL + PG+KVLDLAA
Sbjct  1    MSRASLDKDPHAVAAMFDGVARRYDLTNTVMSLGRDRAWRRATRKALALQPGEKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVAADFSVGMLAAG  R VPKVAGDAT+LPFGD VFDAVTISFGL
Sbjct  61   GTAVSTVELAKSGAWCVAADFSVGMLAAGHKRDVPKVAGDATKLPFGDAVFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +  A LREMARVT+ GGRL+VCEFSTP   +FATAYKEYLMRALP VARAVSSNPE
Sbjct  121  RNVVDHVAGLREMARVTKAGGRLVVCEFSTPRIPVFATAYKEYLMRALPAVARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYK  227
            AY YLAESIRAWPDQA LA QI +AGWS V WRNLTGGIVALH+  K
Sbjct  181  AYVYLAESIRAWPDQAALAEQIGQAGWSDVGWRNLTGGIVALHSARK  227


>gi|108797742|ref|YP_637939.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
sp. MCS]
 gi|119866831|ref|YP_936783.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium 
sp. KMS]
 gi|122977410|sp|Q1BE01.1|UBIE_MYCSS RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|166234729|sp|A1UAY5.1|UBIE_MYCSK RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|108768161|gb|ABG06883.1| demethylmenaquinone methyltransferase [Mycobacterium sp. MCS]
 gi|119692920|gb|ABL89993.1| demethylmenaquinone methyltransferase [Mycobacterium sp. KMS]
Length=230

 Score =  370 bits (949),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 183/228 (81%), Positives = 198/228 (87%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA LDK+P +VASMFD VAR+YDLTNTVLSLGQDR+WRR T +AL IGPG +VLDLAA
Sbjct  1    MSRATLDKNPHEVASMFDAVARRYDLTNTVLSLGQDRFWRRETCAALGIGPGDRVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL  SGAWCVAADFSVGML+AG  R VPKVAGDATRLPF D+ FDAVTISFGL
Sbjct  61   GTAVSTVELAASGAWCVAADFSVGMLSAGRQRDVPKVAGDATRLPFADESFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +  A L EMARVTRPGGRL+VCEFSTPTN  FAT YKEYLM+ALPR+ARAV+SNP+
Sbjct  121  RNVVDHVAGLEEMARVTRPGGRLVVCEFSTPTNRAFATLYKEYLMKALPRMARAVASNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQA LA +I  AGWS VRWRNLTGGIVALHA  KP
Sbjct  181  AYVYLAESIRAWPDQAGLARRIEAAGWSQVRWRNLTGGIVALHAAVKP  228


>gi|169631009|ref|YP_001704658.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE [Mycobacterium 
abscessus ATCC 19977]
 gi|254789945|sp|B1MHC3.1|UBIE_MYCA9 RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|169242976|emb|CAM64004.1| Ubiquinone/menaquinone biosynthesis methlytransferase UbiE [Mycobacterium 
abscessus]
Length=227

 Score =  363 bits (932),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 175/223 (79%), Positives = 190/223 (86%), Gaps = 0/223 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M+RA L+KDP +VASMFD VAR+YD+TNTVLS G+DR+WRRATR ALR+ PG KVLD+AA
Sbjct  1    MNRATLEKDPHEVASMFDAVARRYDITNTVLSFGRDRFWRRATREALRLKPGDKVLDIAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVST ELT+SGAWCVAADFSVGML AGA R VPKVAGDATRLPF D  FDAVTISFGL
Sbjct  61   GTAVSTAELTQSGAWCVAADFSVGMLKAGARRDVPKVAGDATRLPFADHSFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +    LREMARVT+PGGRL VCEFSTP N  F T Y EYLM+ LP VARAVSSNP+
Sbjct  121  RNVVDHVEGLREMARVTKPGGRLAVCEFSTPVNRPFRTLYMEYLMKTLPEVARAVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH  223
            AY YLAESIRAWPDQ  LAHQI+ AGWS VRWRNLTGGIVALH
Sbjct  181  AYVYLAESIRAWPDQEALAHQIASAGWSNVRWRNLTGGIVALH  223


>gi|54027103|ref|YP_121345.1| ubiquinone/menaquinone biosynthesis methyltransferase [Nocardia 
farcinica IFM 10152]
 gi|61217205|sp|Q5YPB0.1|UBIE_NOCFA RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|54018611|dbj|BAD59981.1| putative ubiquinone/menaquinone methyltransferase [Nocardia farcinica 
IFM 10152]
Length=237

 Score =  335 bits (859),  Expect = 4e-90, Method: Compositional matrix adjust.
 Identities = 161/227 (71%), Positives = 190/227 (84%), Gaps = 0/227 (0%)

Query  3    RAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGT  62
            RA+LDK P +VASMFDGVA +YDLTNTV+S+GQDRYWR ATR AL + PG++VLDLAAGT
Sbjct  11   RASLDKQPHEVASMFDGVAERYDLTNTVISMGQDRYWRWATRKALALRPGERVLDLAAGT  70

Query  63   AVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRN  122
             VSTVE  KSGAWCVAADFS GMLAAG+ R+VP VAGDA  LPF D+ FDAV IS+GLRN
Sbjct  71   GVSTVEFAKSGAWCVAADFSKGMLAAGSFREVPMVAGDAMALPFADESFDAVAISYGLRN  130

Query  123  VANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAY  182
            VA+   A+REM RVT+PGGRL++ EFSTP   +F T Y EYLM+ALPRVARAVSSNP+AY
Sbjct  131  VADPDLAMREMLRVTKPGGRLVIAEFSTPVIPVFRTVYMEYLMKALPRVARAVSSNPDAY  190

Query  183  EYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPG  229
             YLAES+RAWP+Q  LA +++ AGWS V+WRNL+GG+VALH GY+ G
Sbjct  191  VYLAESVRAWPNQRQLAMRMAAAGWSSVQWRNLSGGVVALHRGYRLG  237


>gi|111018986|ref|YP_701958.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodococcus 
jostii RHA1]
 gi|110818516|gb|ABG93800.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Rhodococcus 
jostii RHA1]
Length=232

 Score =  332 bits (850),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 162/222 (73%), Positives = 184/222 (83%), Gaps = 0/222 (0%)

Query  2    SRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAG  61
            SRA+L+KDP +VASMFDGVA++YDLTNT+LS GQDR WR+ATRSAL + PG++VLDLAAG
Sbjct  7    SRASLEKDPHEVASMFDGVAKRYDLTNTILSFGQDRSWRKATRSALALKPGERVLDLAAG  66

Query  62   TAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLR  121
            T VSTVEL +SGAWCVA DFS GML AG+ R VP VAGDA  LP+ D VFDA TISFGLR
Sbjct  67   TGVSTVELGRSGAWCVATDFSKGMLQAGSGRHVPMVAGDAMHLPYADAVFDAATISFGLR  126

Query  122  NVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEA  181
            NV++  A LRE+ARVT+PGGRL+V EFSTP    F T Y EYLMRALPRVARAVSSNP+A
Sbjct  127  NVSDFDAGLREIARVTKPGGRLVVSEFSTPVFGPFRTVYMEYLMRALPRVARAVSSNPDA  186

Query  182  YEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH  223
            Y YLAESIRAWP Q  LA +I  AGW  V+WRNLTGG+VALH
Sbjct  187  YVYLAESIRAWPTQQELALRIEAAGWRNVQWRNLTGGVVALH  228


>gi|226361081|ref|YP_002778859.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodococcus 
opacus B4]
 gi|226239566|dbj|BAH49914.1| menaquinone biosynthesis methyltransferase MenH [Rhodococcus 
opacus B4]
Length=232

 Score =  330 bits (847),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 161/222 (73%), Positives = 184/222 (83%), Gaps = 0/222 (0%)

Query  2    SRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAG  61
            SRA+L+KDP +VASMFDGVA++YDLTNT+LS GQDR WR+ATRSAL + PG++VLDLAAG
Sbjct  7    SRASLEKDPHEVASMFDGVAKRYDLTNTILSFGQDRSWRKATRSALALKPGERVLDLAAG  66

Query  62   TAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLR  121
            T VSTVEL +SGAWCVA DFS GML AG+ R VP VAGDA  LP+ D VFDA TISFGLR
Sbjct  67   TGVSTVELGRSGAWCVATDFSKGMLQAGSGRHVPMVAGDAMHLPYADAVFDAATISFGLR  126

Query  122  NVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEA  181
            NV++  A LRE+ARVT+PGGRL+V EFSTP    F T Y EYLM+ALPRVARAVSSNP+A
Sbjct  127  NVSDFDAGLREIARVTKPGGRLVVSEFSTPVFGPFRTVYMEYLMKALPRVARAVSSNPDA  186

Query  182  YEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH  223
            Y YLAESIRAWP Q  LA +I  AGW  V+WRNLTGG+VALH
Sbjct  187  YVYLAESIRAWPTQQELALRIEAAGWRNVQWRNLTGGVVALH  228


>gi|333918066|ref|YP_004491647.1| Menaquinone biosynthesis methyltransferase ubiE [Amycolicicoccus 
subflavus DQS3-9A1]
 gi|333480287|gb|AEF38847.1| Menaquinone biosynthesis methyltransferase ubiE [Amycolicicoccus 
subflavus DQS3-9A1]
Length=236

 Score =  330 bits (847),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 164/223 (74%), Positives = 186/223 (84%), Gaps = 0/223 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            + RA LDK+P DVASMFDGVAR+YD+TNTVLS G+DR WR+ATR ALR+ PG+ VLDLAA
Sbjct  9    LLRATLDKNPHDVASMFDGVARRYDVTNTVLSFGRDRVWRKATRRALRLQPGESVLDLAA  68

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GT VSTVELT+SGAW VAADFS GML AG  R+VP VAGDA  LPF D+ FDA TISFGL
Sbjct  69   GTGVSTVELTRSGAWVVAADFSKGMLQAGRFRRVPMVAGDALHLPFADESFDAATISFGL  128

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV +  AAL E+ RVT+ GGRL+VCEFSTP   +F+TAY EYLMRALP VARAVSSNP+
Sbjct  129  RNVIDIDAALAELRRVTKRGGRLVVCEFSTPVVPVFSTAYMEYLMRALPAVARAVSSNPD  188

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH  223
            AY YLAESIRAWPDQA LA +I  +GWS V+WRNLTGG+VALH
Sbjct  189  AYVYLAESIRAWPDQAGLARRIVASGWSDVQWRNLTGGVVALH  231


>gi|312141026|ref|YP_004008362.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase ubie [Rhodococcus 
equi 103S]
 gi|325675337|ref|ZP_08155021.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Rhodococcus 
equi ATCC 33707]
 gi|311890365|emb|CBH49683.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase UbiE [Rhodococcus 
equi 103S]
 gi|325553308|gb|EGD22986.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Rhodococcus 
equi ATCC 33707]
Length=244

 Score =  327 bits (837),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 161/222 (73%), Positives = 183/222 (83%), Gaps = 0/222 (0%)

Query  2    SRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAG  61
            SRA+L+K P +VASMFDGVA++YDLTNTVLS GQDR WR+ATR+AL + PG++VLDLAAG
Sbjct  19   SRASLEKKPHEVASMFDGVAKRYDLTNTVLSFGQDRSWRKATRAALDLEPGERVLDLAAG  78

Query  62   TAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLR  121
            T VSTVEL +SGAW VA DFS GML AG  R+VP VAGDA  LP+GD VFDA TISFGLR
Sbjct  79   TGVSTVELGRSGAWVVATDFSKGMLQAGIDRRVPMVAGDAMHLPYGDAVFDAATISFGLR  138

Query  122  NVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEA  181
            NV++  A LRE+ARVT+PGGRL+V EFSTP    F T Y EYLM+ALPRVARAVSSNP+A
Sbjct  139  NVSDFDAGLREIARVTKPGGRLVVSEFSTPVFGPFRTVYMEYLMKALPRVARAVSSNPDA  198

Query  182  YEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH  223
            Y YLAESIRAWP Q  LA +I  AGW  V+WRNLTGGIVALH
Sbjct  199  YVYLAESIRAWPTQEQLAGRIEAAGWKNVQWRNLTGGIVALH  240


>gi|226305196|ref|YP_002765154.1| menaquinone biosynthesis methyltransferase MenH [Rhodococcus 
erythropolis PR4]
 gi|229490547|ref|ZP_04384385.1| menaquinone biosynthesis methyltransferase UbiE [Rhodococcus 
erythropolis SK121]
 gi|226184311|dbj|BAH32415.1| menaquinone biosynthesis methyltransferase MenH [Rhodococcus 
erythropolis PR4]
 gi|229322367|gb|EEN88150.1| menaquinone biosynthesis methyltransferase UbiE [Rhodococcus 
erythropolis SK121]
Length=232

 Score =  326 bits (836),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 158/222 (72%), Positives = 181/222 (82%), Gaps = 0/222 (0%)

Query  2    SRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAG  61
            +RA L+K P +VASMFD VA +YDLTNTVLS GQD+ WR+ATR AL + PG+KVLDLAAG
Sbjct  7    TRATLEKQPHEVASMFDDVAERYDLTNTVLSFGQDKGWRKATREALDLKPGEKVLDLAAG  66

Query  62   TAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLR  121
            T VSTVEL +SGAWCVA DFS GML AG +RKVP VAGDA  LP+ D+VFDA TISFGLR
Sbjct  67   TGVSTVELGRSGAWCVATDFSKGMLKAGISRKVPMVAGDAMYLPYADNVFDAATISFGLR  126

Query  122  NVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEA  181
            NV++ +A LRE+ARVT+PGGRL+V EFSTP    F T Y EYLM+ALP+VAR VSSNP+A
Sbjct  127  NVSDFEAGLREIARVTKPGGRLVVSEFSTPVFGPFRTVYMEYLMKALPQVARTVSSNPDA  186

Query  182  YEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH  223
            Y YLAESIRAWP Q  LA +I  AGW  V+WRNLTGGIVALH
Sbjct  187  YVYLAESIRAWPTQEELARKIEAAGWKNVKWRNLTGGIVALH  228


>gi|145294623|ref|YP_001137444.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
glutamicum R]
 gi|166234718|sp|A4QBE5.1|UBIE_CORGB RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|140844543|dbj|BAF53542.1| hypothetical protein [Corynebacterium glutamicum R]
 gi|344045790|gb|EGV41459.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
glutamicum S9114]
Length=230

 Score =  324 bits (831),  Expect = 5e-87, Method: Compositional matrix adjust.
 Identities = 159/228 (70%), Positives = 182/228 (80%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M++A LDKDP DVASMFD V + YDLTNTVLS GQDR WR+ TR  L + PG+KVLDLAA
Sbjct  1    MAKADLDKDPFDVASMFDDVGKNYDLTNTVLSFGQDRVWRKRTRQRLDLKPGEKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGA+CVA DFS GMLAAG  R V KV GD  +LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTVELAKSGAFCVACDFSQGMLAAGKDRDVSKVVGDGMQLPFADNSFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +A L+EMARVT+PGGRL V EFSTP   +F T YKEYLMR LP+VARAVSSNPE
Sbjct  121  RNIHDFRAGLKEMARVTKPGGRLTVAEFSTPVIPVFGTVYKEYLMRLLPQVARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLA+SIRAWP QA LA +I++ GWS   W+NLT GIVALH+  KP
Sbjct  181  AYIYLADSIRAWPSQAELAREINQNGWSDCGWQNLTFGIVALHSAIKP  228


>gi|227502596|ref|ZP_03932645.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
accolens ATCC 49725]
 gi|306835163|ref|ZP_07468200.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
accolens ATCC 49726]
 gi|227076636|gb|EEI14599.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
accolens ATCC 49725]
 gi|304568952|gb|EFM44480.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
accolens ATCC 49726]
Length=234

 Score =  324 bits (830),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 160/234 (69%), Positives = 180/234 (77%), Gaps = 0/234 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MS+A LDK P DVA MFD V  KYDLTNTVLS GQD+ WR+ TR  L + PG+KVLDLAA
Sbjct  1    MSKADLDKKPFDVARMFDAVGEKYDLTNTVLSFGQDKRWRKRTRERLNLQPGEKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVST EL+KSGAWCVA DFS GMLAAG+ R VPKVAGD  +LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTEELSKSGAWCVACDFSRGMLAAGSERDVPKVAGDGMKLPFADNTFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +  LREMARVT+PGGRL V EFSTP   +F T YKEYLMR LP VAR VSSNP+
Sbjct  121  RNIHDYELGLREMARVTKPGGRLAVAEFSTPIVPVFGTVYKEYLMRLLPPVARVVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ  234
            AY YLAESIRAWP Q  LA  I+R GW+   W+NLT GIVALH+  KP    PQ
Sbjct  181  AYIYLAESIRAWPGQEELAAAINRNGWADAGWQNLTLGIVALHSATKPLADAPQ  234


>gi|255324687|ref|ZP_05365801.1| menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
tuberculostearicum SK141]
 gi|311739257|ref|ZP_07713094.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
pseudogenitalium ATCC 33035]
 gi|255298162|gb|EET77465.1| menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
tuberculostearicum SK141]
 gi|311305683|gb|EFQ81749.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
pseudogenitalium ATCC 33035]
Length=229

 Score =  323 bits (829),  Expect = 9e-87, Method: Compositional matrix adjust.
 Identities = 160/228 (71%), Positives = 178/228 (79%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MS+A LDK P DVA MFD V  KYDLTNTVLS GQD +WR+ TR  L + PG+KVLDLAA
Sbjct  1    MSKADLDKKPFDVARMFDAVGEKYDLTNTVLSFGQDAHWRKRTRERLNLKPGEKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL+KSGAWCVA DFS GMLAAG  R VPKVAGD  +LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTVELSKSGAWCVACDFSRGMLAAGRERDVPKVAGDGMKLPFADNTFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +  LREMARVT+PGGRL V EFSTP   +F T YKEYLMR LP VAR VSSNPE
Sbjct  121  RNIHDFELGLREMARVTKPGGRLAVAEFSTPVVPIFGTVYKEYLMRLLPPVARLVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWP Q  LA  I+R GW+   W+NLT GIVALH+  KP
Sbjct  181  AYIYLAESIRAWPGQEELAAVINRNGWAEAGWQNLTFGIVALHSAVKP  228


>gi|227505151|ref|ZP_03935200.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
striatum ATCC 6940]
 gi|227198264|gb|EEI78312.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
striatum ATCC 6940]
Length=230

 Score =  323 bits (829),  Expect = 9e-87, Method: Compositional matrix adjust.
 Identities = 158/228 (70%), Positives = 178/228 (79%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MS+A LDK P DVA MFD V  KYD+TNTVLS GQDR WR+ TR  L + PG+KVLDLAA
Sbjct  1    MSKADLDKKPFDVAQMFDAVGAKYDITNTVLSFGQDRIWRKRTRERLDLKPGEKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVST EL+KSGAWCVA DFS GMLAAGAAR VPKVAGD  +LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTEELSKSGAWCVACDFSRGMLAAGAARDVPKVAGDGMKLPFADNTFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +  LREMARVT+PGGRL V EFS P   +F T YKEYL R LP +A+ VSSNPE
Sbjct  121  RNIHDFELGLREMARVTKPGGRLAVAEFSKPIIPVFGTVYKEYLTRLLPPIAKLVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWPDQ  LA  I+R GW G  W+N+T GIVALH+  KP
Sbjct  181  AYVYLAESIRAWPDQEELAAAINRNGWEGAGWKNMTLGIVALHSATKP  228


>gi|324997730|ref|ZP_08118842.1| ubiquinone/menaquinone biosynthesis methyltransferase [Pseudonocardia 
sp. P1]
Length=230

 Score =  323 bits (828),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 166/229 (73%), Positives = 179/229 (79%), Gaps = 1/229 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA LDKDP DVA MFDGVAR+YDLTNT +S GQDRYWR  TR AL + PG+KVLDLAA
Sbjct  1    MSRAELDKDPHDVARMFDGVARRYDLTNTAMSGGQDRYWRVQTRRALALSPGEKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL K GAWCVAADFS+GML AGA R VPK A DA  LPF D  FDAVTISFGL
Sbjct  61   GTAVSTVELAKDGAWCVAADFSLGMLRAGAHRDVPKAAADALHLPFADASFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYK-EYLMRALPRVARAVSSNP  179
            RNVA+  A LREMARVTRPGGRL+VCEFSTPT A F   Y+   L   +P VAR VSSNP
Sbjct  121  RNVADTVAGLREMARVTRPGGRLVVCEFSTPTWAPFRALYQGAVLGHLIPTVARTVSSNP  180

Query  180  EAYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            +AY YLAESIR WPDQA L+ +I+ AGW  V WRNLT G VALH  YKP
Sbjct  181  DAYLYLAESIRDWPDQAALSQKIADAGWERVAWRNLTVGAVALHRAYKP  229


>gi|19551714|ref|NP_599716.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
glutamicum ATCC 13032]
 gi|62389369|ref|YP_224771.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
glutamicum ATCC 13032]
 gi|45593587|sp|Q8NT39.1|UBIE_CORGL RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|21323236|dbj|BAB97864.1| Methylase involved in ubiquinone/menaquinone biosynthesis [Corynebacterium 
glutamicum ATCC 13032]
 gi|41324703|emb|CAF19185.1| UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFER [Corynebacterium 
glutamicum ATCC 13032]
Length=230

 Score =  322 bits (826),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 158/228 (70%), Positives = 181/228 (80%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M++A LDKDP DVASMFD V + YDLTNTVLS GQDR WR+ TR  L + PG+KVLDLAA
Sbjct  1    MAKADLDKDPFDVASMFDDVGKNYDLTNTVLSFGQDRVWRKRTRQRLDLKPGEKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGA+CVA DFS GMLAAG  R V KV GD  +LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTVELAKSGAFCVACDFSQGMLAAGKDRDVSKVVGDGMQLPFADNSFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +A L+EMARVT+PGGRL V EFSTP   +F T YKEYLMR LP+ ARAVSSNPE
Sbjct  121  RNIHDFRAGLKEMARVTKPGGRLTVAEFSTPVIPVFGTVYKEYLMRLLPQAARAVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLA+SIRAWP QA LA +I++ GWS   W+NLT GIVALH+  KP
Sbjct  181  AYIYLADSIRAWPSQAELAREINQNGWSDCGWQNLTFGIVALHSAIKP  228


>gi|296119173|ref|ZP_06837743.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
ammoniagenes DSM 20306]
 gi|295967799|gb|EFG81054.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
ammoniagenes DSM 20306]
Length=229

 Score =  321 bits (822),  Expect = 7e-86, Method: Compositional matrix adjust.
 Identities = 157/226 (70%), Positives = 177/226 (79%), Gaps = 0/226 (0%)

Query  3    RAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGT  62
            +A L+K P DVASMFD V  KYD+TNTVLS GQDR WR+ TR  L + PG+KVLDLAAGT
Sbjct  4    KADLNKKPFDVASMFDAVGEKYDITNTVLSFGQDRRWRKLTRQRLNLKPGEKVLDLAAGT  63

Query  63   AVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRN  122
            AVSTVEL+KSGAWCVA DFS GMLAAG  R VPKVAGD  RLPF D  FDAVTIS+GLRN
Sbjct  64   AVSTVELSKSGAWCVACDFSRGMLAAGEDRNVPKVAGDGMRLPFADSTFDAVTISYGLRN  123

Query  123  VANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAY  182
            + + +  LREMARVT+PGGRL V EFS P   +F T YKEYLMR LP +AR VSSNP+AY
Sbjct  124  IHDFELGLREMARVTKPGGRLAVAEFSKPVIPVFGTFYKEYLMRLLPPMARLVSSNPDAY  183

Query  183  EYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
             YLAESIRAWP+Q  LA  I+R GW+   W+NLTGGIVALH+  KP
Sbjct  184  IYLAESIRAWPEQEALAAIINRNGWTDAGWQNLTGGIVALHSAIKP  229


>gi|340795374|ref|YP_004760837.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
variabile DSM 44702]
 gi|340535284|gb|AEK37764.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
variabile DSM 44702]
Length=231

 Score =  320 bits (820),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 162/228 (72%), Positives = 180/228 (79%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA+L+KDP DVASMFD V + YDLTNTVLS GQDR WR+ TR  L +GPG KVLDLAA
Sbjct  1    MSRASLEKDPHDVASMFDAVGKNYDLTNTVLSFGQDRLWRKRTRRRLGLGPGDKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL +SGAWCVA DFS GMLAAG  R VPKV GD   LPF D+ FDAVTISFGL
Sbjct  61   GTAVSTVELAESGAWCVACDFSQGMLAAGRDRDVPKVCGDGMNLPFADNTFDAVTISFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ +  A LREMARVTRPGG+L VCEFSTP   +F+T YKEYLMRALP VA+AVSSN E
Sbjct  121  RNIVDPAAGLREMARVTRPGGKLTVCEFSTPVVPVFSTVYKEYLMRALPAVAKAVSSNAE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWP+Q  LA  ++  GW G  W+NLT GI ALH+  KP
Sbjct  181  AYVYLAESIRAWPEQEELATIVNDNGWEGCGWQNLTFGITALHSATKP  228


>gi|334696089|gb|AEG80886.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
ulcerans 809]
Length=232

 Score =  320 bits (819),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 154/229 (68%), Positives = 179/229 (79%), Gaps = 0/229 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M++A+L+K+P DVA MFDGV + YD+TNTVLS GQDR WR  TR  L + PG++VLDLAA
Sbjct  1    MAKASLEKNPFDVAKMFDGVGKNYDITNTVLSFGQDRKWREKTRERLNLKPGERVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAW VA DFS GMLAAG  R VPKV GD  +LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTVELKKSGAWVVACDFSQGMLAAGKDRDVPKVVGDGMQLPFADNSFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QAALREMARVT+PGGRL + EFSTP    F T YKEYL R LP +A+AV +NPE
Sbjct  121  RNVHDYQAALREMARVTKPGGRLTIAEFSTPNVPGFKTIYKEYLTRLLPLIAKAVGTNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPG  229
            AYEYLAESIRAWP++  LA  I+  GWS   W+NL+ GIVALH+  KPG
Sbjct  181  AYEYLAESIRAWPEREELARAINNNGWSDAGWQNLSLGIVALHSAVKPG  229


>gi|337289966|ref|YP_004628987.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
ulcerans BR-AD22]
 gi|334698272|gb|AEG83068.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
ulcerans BR-AD22]
Length=232

 Score =  319 bits (817),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 154/229 (68%), Positives = 179/229 (79%), Gaps = 0/229 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M++A+L+K+P DVA MFDGV + YD+TNTVLS GQDR WR  TR  L + PG++VLDLAA
Sbjct  1    MAKASLEKNPFDVAKMFDGVGKNYDITNTVLSFGQDRKWREKTRERLNLKPGERVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAW VA DFS GMLAAG  R VPKV GD  +LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTVELKKSGAWVVACDFSQGMLAAGKDRDVPKVVGDGMQLPFTDNSFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QAALREMARVT+PGGRL + EFSTP    F T YKEYL R LP +A+AV +NPE
Sbjct  121  RNVHDYQAALREMARVTKPGGRLTIAEFSTPNVPGFKTIYKEYLTRLLPLIAKAVGTNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPG  229
            AYEYLAESIRAWP++  LA  I+  GWS   W+NL+ GIVALH+  KPG
Sbjct  181  AYEYLAESIRAWPEREELARAINNNGWSDAGWQNLSLGIVALHSAVKPG  229


>gi|227832178|ref|YP_002833885.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
aurimucosum ATCC 700975]
 gi|262183970|ref|ZP_06043391.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
aurimucosum ATCC 700975]
 gi|254789916|sp|C3PKL1.1|UBIE_CORA7 RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|227453194|gb|ACP31947.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
aurimucosum ATCC 700975]
Length=229

 Score =  319 bits (817),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 157/228 (69%), Positives = 176/228 (78%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MS+A L+K P DVA MFD V +KYD+TNTVLS GQD  WRR TR  L   PG+KVLDLAA
Sbjct  1    MSKADLEKKPFDVARMFDAVGKKYDITNTVLSFGQDARWRRLTRERLNPQPGEKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVST EL+KSGAWCVA DFS+GMLAAGA R VPKVAGD  RLPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTEELSKSGAWCVACDFSLGMLAAGAERDVPKVAGDGMRLPFADNTFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +  LREMARVT+PGGRL V EFS P   +F T YKEYL R LP +A+ VSSNPE
Sbjct  121  RNIHDFELGLREMARVTKPGGRLAVAEFSKPVIPVFGTVYKEYLTRLLPPIAKVVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIRAWP+Q  LA  I+R GW    WRNLT GIVALH+  KP
Sbjct  181  AYIYLAESIRAWPEQHELAAAINRNGWEQAGWRNLTFGIVALHSAVKP  228


>gi|161485998|ref|NP_737091.2| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
efficiens YS-314]
 gi|48474467|sp|Q8FSB3.2|UBIE_COREF RecName: Full=Demethylmenaquinone methyltransferase; AltName: 
Full=Menaquinone biosynthesis methyltransferase ubiE
Length=230

 Score =  318 bits (814),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 163/230 (71%), Positives = 181/230 (79%), Gaps = 0/230 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M++A+LDKDP DVASMFD V  KYDLTNTVLS GQDR WRR TR  L + PG+KVLDLAA
Sbjct  1    MAKASLDKDPFDVASMFDDVGDKYDLTNTVLSFGQDRVWRRRTRERLDLKPGEKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVA DFS GMLAAG  R VP V GD   LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTVELAKSGAWCVACDFSQGMLAAGKHRNVPMVVGDGMTLPFADNSFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +A LREMARVT+PGGRL V EFSTP   +F T YKEYLMR LP+VAR VSSNPE
Sbjct  121  RNIHDFRAGLREMARVTKPGGRLTVAEFSTPVIPVFGTLYKEYLMRLLPKVARVVSSNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGK  230
            AY YLAESIRAWPDQ  LA +I+  GWS   W+NLT GIVA+H+  KPG 
Sbjct  181  AYIYLAESIRAWPDQEDLAREINANGWSDCGWQNLTFGIVAMHSAIKPGN  230


>gi|300857716|ref|YP_003782699.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
pseudotuberculosis FRC41]
 gi|300685170|gb|ADK28092.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
pseudotuberculosis FRC41]
 gi|302205458|gb|ADL09800.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
pseudotuberculosis C231]
 gi|302330011|gb|ADL20205.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
pseudotuberculosis 1002]
 gi|308275694|gb|ADO25593.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
pseudotuberculosis I19]
Length=232

 Score =  316 bits (810),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 153/228 (68%), Positives = 178/228 (79%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M++A+L+K+P DVA MFDGV + YD+TNTVLS GQDR WR  TR  L + PG++VLDLAA
Sbjct  1    MAKASLEKNPFDVAKMFDGVGKNYDITNTVLSFGQDRKWREKTRERLNLQPGERVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAW VA DFS GMLAAG  R VPKV GD  +LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTVELGKSGAWVVACDFSQGMLAAGKERDVPKVVGDGMQLPFADNSFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QAALREMARVT+PGGRL + EFSTP    F T YKEYL R LP +A+AV +NPE
Sbjct  121  RNVHDFQAALREMARVTKPGGRLTIAEFSTPNVPGFKTIYKEYLTRLLPLIAKAVGTNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AYEYLAESIRAWP++  LA  I+  GWS   W+NL+ GIVALH+  KP
Sbjct  181  AYEYLAESIRAWPEREELARAINNNGWSDAGWQNLSLGIVALHSAVKP  228


>gi|341824119|gb|AEK91640.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
pseudotuberculosis PAT10]
Length=232

 Score =  315 bits (808),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 152/228 (67%), Positives = 178/228 (79%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            M++A+L+K+P DVA MFDGV + YD+TNTVLS GQDR WR  TR  L + PG++VLDLAA
Sbjct  1    MAKASLEKNPFDVAKMFDGVGKNYDITNTVLSFGQDRKWREKTRERLNLQPGERVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAW VA DFS GMLAAG  R VPKV GD  +LPF D+ FDAVTIS+GL
Sbjct  61   GTAVSTVELGKSGAWVVACDFSQGMLAAGKERDVPKVVGDGMQLPFADNSFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV + QAALREMARVT+PGGRL + EFSTP    F T YKEYL R LP +A+AV +NPE
Sbjct  121  RNVHDFQAALREMARVTKPGGRLTIAEFSTPNVPGFKTIYKEYLTRLLPLIAKAVGTNPE  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AYEYLAESIRAWP++  LA  ++  GWS   W+NL+ GIVALH+  KP
Sbjct  181  AYEYLAESIRAWPEREELARVVNNNGWSDAGWQNLSLGIVALHSAVKP  228


>gi|23492317|dbj|BAC17291.1| putative methyltransferase [Corynebacterium efficiens YS-314]
Length=242

 Score =  314 bits (804),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 162/230 (71%), Positives = 181/230 (79%), Gaps = 0/230 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            +++A+LDKDP DVASMFD V  KYDLTNTVLS GQDR WRR TR  L + PG+KVLDLAA
Sbjct  13   VAKASLDKDPFDVASMFDDVGDKYDLTNTVLSFGQDRVWRRRTRERLDLKPGEKVLDLAA  72

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVSTVEL KSGAWCVA DFS GMLAAG  R VP V GD   LPF D+ FDAVTIS+GL
Sbjct  73   GTAVSTVELAKSGAWCVACDFSQGMLAAGKHRNVPMVVGDGMTLPFADNSFDAVTISYGL  132

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +A LREMARVT+PGGRL V EFSTP   +F T YKEYLMR LP+VAR VSSNPE
Sbjct  133  RNIHDFRAGLREMARVTKPGGRLTVAEFSTPVIPVFGTLYKEYLMRLLPKVARVVSSNPE  192

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGK  230
            AY YLAESIRAWPDQ  LA +I+  GWS   W+NLT GIVA+H+  KPG 
Sbjct  193  AYIYLAESIRAWPDQEDLAREINANGWSDCGWQNLTFGIVAMHSAIKPGN  242


>gi|238062208|ref|ZP_04606917.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micromonospora 
sp. ATCC 39149]
 gi|237884019|gb|EEP72847.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micromonospora 
sp. ATCC 39149]
Length=236

 Score =  313 bits (803),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 156/223 (70%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  3    RAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGT  62
            RA+LDK P +VA+MFDGVA +YDLTNTVLS GQDR WRRATR+AL +GPG +VLD+ AGT
Sbjct  9    RASLDKQPHEVAAMFDGVAARYDLTNTVLSFGQDRSWRRATRAALGLGPGDRVLDVGAGT  68

Query  63   AVSTVELTKSGAWCVAADFSVGMLAAGAARK--VPKVAGDATRLPFGDDVFDAVTISFGL  120
             VST E+ +SGA+ V AD S+GML+AG   +  VP +AGDA RLPF D  FDAVTISF L
Sbjct  69   GVSTEEMAQSGAYAVGADLSLGMLSAGKRSRPAVPLLAGDALRLPFADASFDAVTISFAL  128

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RNV++  AALRE+ARVTRPGGRL+VCEFSTP N  F T Y  YLMR+LP VAR VSSNPE
Sbjct  129  RNVSDTNAALRELARVTRPGGRLVVCEFSTPVNPAFRTVYLSYLMRSLPAVARTVSSNPE  188

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH  223
            AY YLAESIRAWPDQ+ LA +I  AGW  V WRNLTGG+VALH
Sbjct  189  AYVYLAESIRAWPDQSALAARIGAAGWERVAWRNLTGGVVALH  231


>gi|336326469|ref|YP_004606435.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
resistens DSM 45100]
 gi|336102451|gb|AEI10271.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium 
resistens DSM 45100]
Length=229

 Score =  313 bits (802),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 157/229 (69%), Positives = 183/229 (80%), Gaps = 0/229 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA+LDK P +VASMFDGV +KYD+TNTVLS GQDR WR+ TR  L + PG KVLDLAA
Sbjct  1    MSRASLDKKPHEVASMFDGVGKKYDITNTVLSFGQDRMWRKRTRRRLDLRPGDKVLDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVST EL ++GA+C+A DFS+GML AGA R VPK+ GD T+LPF D  FDAVTIS+GL
Sbjct  61   GTAVSTEELAETGAYCIACDFSMGMLRAGAHRDVPKICGDGTQLPFADATFDAVTISYGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +A LREMARVT+PGG+L V EFSTP   +F T YKEYLMRALP VAR VSSNP+
Sbjct  121  RNIVDFRAGLREMARVTKPGGKLAVAEFSTPVIPVFKTIYKEYLMRALPSVARVVSSNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPG  229
            AY YLAESIRAWPDQ  LA +I + GW  V W+NLTGGIVALH+  + G
Sbjct  181  AYIYLAESIRAWPDQEELAREIGQCGWENVGWQNLTGGIVALHSATRRG  229


>gi|291004449|ref|ZP_06562422.1| ubiquinone/menaquinone biosynthesis methyltransferase [Saccharopolyspora 
erythraea NRRL 2338]
Length=230

 Score =  310 bits (794),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 153/228 (68%), Positives = 177/228 (78%), Gaps = 0/228 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            MSRA LDK+PR+VA+MFDGVAR+YDLTNTV+S GQDR WR  TR AL+   G+++LDLAA
Sbjct  1    MSRAGLDKNPREVAAMFDGVARRYDLTNTVISFGQDRRWRHVTRDALQPKAGERILDLAA  60

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            G+ VSTVE  +SGAWCVAAD SVGML AG  R+VP VA DA RLPF D+ FDAVTI FGL
Sbjct  61   GSGVSTVEFGRSGAWCVAADLSVGMLQAGRHREVPMVAADALRLPFADESFDAVTIMFGL  120

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ +  A LREMARV RPGGRL+VCEFSTPT   F + Y  Y+MR LP VA AV+SNP+
Sbjct  121  RNLTDTVAGLREMARVVRPGGRLVVCEFSTPTWKPFRSVYMLYVMRILPLVAGAVASNPD  180

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP  228
            AY YLAESIR WPDQ  LA +I+ AGW  V WR+LT G VA+H   KP
Sbjct  181  AYTYLAESIRDWPDQKALAGKIAEAGWGEVAWRDLTNGAVAVHRAVKP  228


>gi|213964999|ref|ZP_03393198.1| menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
amycolatum SK46]
 gi|213952535|gb|EEB63918.1| menaquinone biosynthesis methyltransferase UbiE [Corynebacterium 
amycolatum SK46]
Length=250

 Score =  310 bits (794),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 150/230 (66%), Positives = 179/230 (78%), Gaps = 0/230 (0%)

Query  1    MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA  60
            +SRA L K+P +VASMFDGV + YD+TNTVL+ G D YWR  T   L + PGQKVLDLAA
Sbjct  21   VSRADLTKNPSEVASMFDGVGKNYDITNTVLTGGIDHYWRVRTAKRLNLQPGQKVLDLAA  80

Query  61   GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL  120
            GTAVS+VEL KSGA+ VA DFS GML AGA R VPKV GD  +LPF D+ FDAVTISFGL
Sbjct  81   GTAVSSVELAKSGAYVVACDFSRGMLKAGAHRDVPKVCGDGMKLPFPDNTFDAVTISFGL  140

Query  121  RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE  180
            RN+ + +A L E+ARVT+PGG+L VCEFSTP   +F+T YKEYLMRALP++A+ VSSNPE
Sbjct  141  RNIVDYKAGLAELARVTKPGGQLTVCEFSTPVVPVFSTFYKEYLMRALPQIAKVVSSNPE  200

Query  181  AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGK  230
            AY YLAESIRAWP+Q+ LA  I+ +GW    W+NLT GI ALH+  KP +
Sbjct  201  AYVYLAESIRAWPNQSQLARDINASGWEDAGWQNLTFGIAALHSATKPAQ  250



Lambda     K      H
   0.320    0.132    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 313223274342




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40