BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0558
Length=234
Score E
Sequences producing significant alignments: (Bits) Value
gi|31791740|ref|NP_854233.1| ubiquinone/menaquinone biosynthesis... 475 3e-132
gi|167968369|ref|ZP_02550646.1| ubiquinone/menaquinone biosynthe... 473 1e-131
gi|340625585|ref|YP_004744037.1| putative ubiquinone/menaquinone... 472 2e-131
gi|13880096|gb|AAK44807.1| ubiquinone/menaquinone biosynthesis m... 446 1e-123
gi|342858931|ref|ZP_08715585.1| ubiquinone/menaquinone biosynthe... 426 1e-117
gi|183980928|ref|YP_001849219.1| ubiquinone/menaquinone methlytr... 419 2e-115
gi|296168324|ref|ZP_06850248.1| ubiquinone/menaquinone biosynthe... 419 2e-115
gi|118616463|ref|YP_904795.1| ubiquinone/menaquinone biosynthesi... 417 9e-115
gi|161611201|ref|NP_962989.2| ubiquinone/menaquinone biosynthesi... 416 2e-114
gi|336460468|gb|EGO39363.1| ubiquinone/menaquinone biosynthesis ... 416 2e-114
gi|41398986|gb|AAS06605.1| UbiE [Mycobacterium avium subsp. para... 414 7e-114
gi|240169238|ref|ZP_04747897.1| ubiquinone/menaquinone biosynthe... 413 1e-113
gi|118463483|ref|YP_883713.1| ubiquinone/menaquinone biosynthesi... 413 1e-113
gi|254818360|ref|ZP_05223361.1| ubiquinone/menaquinone biosynthe... 409 2e-112
gi|289568486|ref|ZP_06448713.1| ubiquinone/menaquinone biosynthe... 396 1e-108
gi|118470851|ref|YP_885509.1| ubiquinone/menaquinone biosynthesi... 389 1e-106
gi|161723263|ref|NP_302480.2| ubiquinone/menaquinone biosynthesi... 388 3e-106
gi|221230694|ref|YP_002504110.1| ubiquinone/menaquinone biosynth... 386 2e-105
gi|120401998|ref|YP_951827.1| ubiquinone/menaquinone biosynthesi... 381 4e-104
gi|145225832|ref|YP_001136510.1| ubiquinone/menaquinone biosynth... 377 7e-103
gi|315442460|ref|YP_004075339.1| demethylmenaquinone methyltrans... 377 1e-102
gi|126433368|ref|YP_001069059.1| ubiquinone/menaquinone biosynth... 371 4e-101
gi|333989192|ref|YP_004521806.1| ubiquinone/menaquinone methyltr... 371 4e-101
gi|108797742|ref|YP_637939.1| ubiquinone/menaquinone biosynthesi... 370 1e-100
gi|169631009|ref|YP_001704658.1| ubiquinone/menaquinone biosynth... 363 1e-98
gi|54027103|ref|YP_121345.1| ubiquinone/menaquinone biosynthesis... 335 4e-90
gi|111018986|ref|YP_701958.1| ubiquinone/menaquinone biosynthesi... 332 4e-89
gi|226361081|ref|YP_002778859.1| ubiquinone/menaquinone biosynth... 330 8e-89
gi|333918066|ref|YP_004491647.1| Menaquinone biosynthesis methyl... 330 8e-89
gi|312141026|ref|YP_004008362.1| 2-octaprenyl-6-methoxy-1,4-benz... 327 1e-87
gi|226305196|ref|YP_002765154.1| menaquinone biosynthesis methyl... 326 1e-87
gi|145294623|ref|YP_001137444.1| ubiquinone/menaquinone biosynth... 324 5e-87
gi|227502596|ref|ZP_03932645.1| ubiquinone/menaquinone biosynthe... 324 7e-87
gi|255324687|ref|ZP_05365801.1| menaquinone biosynthesis methylt... 323 9e-87
gi|227505151|ref|ZP_03935200.1| ubiquinone/menaquinone biosynthe... 323 9e-87
gi|324997730|ref|ZP_08118842.1| ubiquinone/menaquinone biosynthe... 323 1e-86
gi|19551714|ref|NP_599716.1| ubiquinone/menaquinone biosynthesis... 322 2e-86
gi|296119173|ref|ZP_06837743.1| ubiquinone/menaquinone biosynthe... 321 7e-86
gi|340795374|ref|YP_004760837.1| ubiquinone/menaquinone biosynth... 320 1e-85
gi|334696089|gb|AEG80886.1| ubiquinone/menaquinone biosynthesis ... 320 2e-85
gi|337289966|ref|YP_004628987.1| ubiquinone/menaquinone biosynth... 319 2e-85
gi|227832178|ref|YP_002833885.1| ubiquinone/menaquinone biosynth... 319 2e-85
gi|161485998|ref|NP_737091.2| ubiquinone/menaquinone biosynthesi... 318 6e-85
gi|300857716|ref|YP_003782699.1| ubiquinone/menaquinone biosynth... 316 1e-84
gi|341824119|gb|AEK91640.1| Ubiquinone/menaquinone biosynthesis ... 315 3e-84
gi|23492317|dbj|BAC17291.1| putative methyltransferase [Coryneba... 314 8e-84
gi|238062208|ref|ZP_04606917.1| ubiquinone/menaquinone biosynthe... 313 1e-83
gi|336326469|ref|YP_004606435.1| ubiquinone/menaquinone biosynth... 313 1e-83
gi|291004449|ref|ZP_06562422.1| ubiquinone/menaquinone biosynthe... 310 1e-82
gi|213964999|ref|ZP_03393198.1| menaquinone biosynthesis methylt... 310 1e-82
>gi|31791740|ref|NP_854233.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
bovis AF2122/97]
gi|57116754|ref|YP_177738.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
tuberculosis H37Rv]
gi|121636476|ref|YP_976699.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
77 more sequence titles
Length=234
Score = 475 bits (1222), Expect = 3e-132, Method: Compositional matrix adjust.
Identities = 234/234 (100%), Positives = 234/234 (100%), Gaps = 0/234 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL
Sbjct 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE
Sbjct 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ 234
AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ
Sbjct 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ 234
>gi|167968369|ref|ZP_02550646.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
tuberculosis H37Ra]
Length=234
Score = 473 bits (1217), Expect = 1e-131, Method: Compositional matrix adjust.
Identities = 233/234 (99%), Positives = 233/234 (99%), Gaps = 0/234 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVP VAGDATRLPFGDDVFDAVTISFGL
Sbjct 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPNVAGDATRLPFGDDVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE
Sbjct 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ 234
AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ
Sbjct 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ 234
>gi|340625585|ref|YP_004744037.1| putative ubiquinone/menaquinone biosynthesis methyltransferase
MENH [Mycobacterium canettii CIPT 140010059]
gi|340003775|emb|CCC42901.1| putative ubiquinone/menaquinone biosynthesis methyltransferase
MENH (2-heptaprenyl-1,4-naphthoquinone methyltransferase)
[Mycobacterium canettii CIPT 140010059]
Length=234
Score = 472 bits (1214), Expect = 2e-131, Method: Compositional matrix adjust.
Identities = 232/234 (99%), Positives = 234/234 (100%), Gaps = 0/234 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRAALDKDPRDVASMF+GVAR+YDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct 1 MSRAALDKDPRDVASMFNGVARRYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL
Sbjct 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE
Sbjct 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ 234
AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ
Sbjct 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ 234
>gi|13880096|gb|AAK44807.1| ubiquinone/menaquinone biosynthesis methlytransferase [Mycobacterium
tuberculosis CDC1551]
Length=219
Score = 446 bits (1147), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 219/219 (100%), Positives = 219/219 (100%), Gaps = 0/219 (0%)
Query 16 MFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGTAVSTVELTKSGAW 75
MFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGTAVSTVELTKSGAW
Sbjct 1 MFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGTAVSTVELTKSGAW 60
Query 76 CVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRNVANQQAALREMAR 135
CVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRNVANQQAALREMAR
Sbjct 61 CVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRNVANQQAALREMAR 120
Query 136 VTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAYEYLAESIRAWPDQ 195
VTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAYEYLAESIRAWPDQ
Sbjct 121 VTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAYEYLAESIRAWPDQ 180
Query 196 AVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ 234
AVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ
Sbjct 181 AVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ 219
>gi|342858931|ref|ZP_08715585.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
colombiense CECT 3035]
gi|342133172|gb|EGT86375.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
colombiense CECT 3035]
Length=230
Score = 426 bits (1095), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 208/228 (92%), Positives = 217/228 (96%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA LDKDPRDVASMFDGVAR+YDLTNTVLS+GQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct 1 MSRAELDKDPRDVASMFDGVARRYDLTNTVLSMGQDRYWRKATRSALDIGPGQKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR VPKVAGDATRLPFGDDVFDAVTISFGL
Sbjct 61 GTAVSTVELQKSGAWCVAADFSVGMLAAGAARDVPKVAGDATRLPFGDDVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QA LREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNPE
Sbjct 121 RNVVDTQAGLREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQA LA QI++AGWSGVRWRNLTGGIVALHAG+KP
Sbjct 181 AYVYLAESIRAWPDQAALAQQITQAGWSGVRWRNLTGGIVALHAGHKP 228
>gi|183980928|ref|YP_001849219.1| ubiquinone/menaquinone methlytransferase, MenH [Mycobacterium
marinum M]
gi|254789947|sp|B2HRQ2.1|UBIE_MYCMM RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|183174254|gb|ACC39364.1| ubiquinone/menaquinone methlytransferase, MenH [Mycobacterium
marinum M]
Length=231
Score = 419 bits (1077), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 208/228 (92%), Positives = 213/228 (94%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRAALDKDPRDVASMFDGVAR+YDLTNTVLSLGQDRYWRRATRSALRIGPG KVLDLAA
Sbjct 1 MSRAALDKDPRDVASMFDGVARRYDLTNTVLSLGQDRYWRRATRSALRIGPGDKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAG RKV KVAGDATRLPF DDVFDAVTISFGL
Sbjct 61 GTAVSTVELAKSGAWCVAADFSVGMLAAGHERKVCKVAGDATRLPFADDVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + AALREMARVTRPGGRL+VCEFSTP +ALFAT YKEYLMRALPRVARAVSSNPE
Sbjct 121 RNVVDFSAALREMARVTRPGGRLVVCEFSTPVSALFATVYKEYLMRALPRVARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQA LA Q+SRAGWS VRWRNLTGGIVALHAGYKP
Sbjct 181 AYVYLAESIRAWPDQAALAQQMSRAGWSAVRWRNLTGGIVALHAGYKP 228
>gi|296168324|ref|ZP_06850248.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896755|gb|EFG76388.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=230
Score = 419 bits (1076), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 208/228 (92%), Positives = 213/228 (94%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRAALDKDPRDVASMFDGVAR+YDLTNTVLSLGQDR+WRRATRSAL IGPG KVLDLAA
Sbjct 1 MSRAALDKDPRDVASMFDGVARRYDLTNTVLSLGQDRFWRRATRSALTIGPGHKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR VPKV DATRLPFGD VFDAVTISFGL
Sbjct 61 GTAVSTVELQKSGAWCVAADFSVGMLAAGAARNVPKVGADATRLPFGDGVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV N QAALREMARVTRPGGRL+VCEFSTPTNALFATAYKEYLMRALPRVARAVSSNP+
Sbjct 121 RNVVNPQAALREMARVTRPGGRLVVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQ LA ISRAGW+ VRWRNLTGGIVALHAGYKP
Sbjct 181 AYVYLAESIRAWPDQEGLARDISRAGWAAVRWRNLTGGIVALHAGYKP 228
>gi|118616463|ref|YP_904795.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
ulcerans Agy99]
gi|166234731|sp|A0PLV5.1|UBIE_MYCUA RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|118568573|gb|ABL03324.1| ubiquinone/menaquinone methlytransferase, MenH [Mycobacterium
ulcerans Agy99]
Length=231
Score = 417 bits (1071), Expect = 9e-115, Method: Compositional matrix adjust.
Identities = 206/228 (91%), Positives = 213/228 (94%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRAALDKDPRDVASMFDGVAR+YDLTNTVLSLGQDRYWRRATRSALRIGPG KVLDLAA
Sbjct 1 MSRAALDKDPRDVASMFDGVARRYDLTNTVLSLGQDRYWRRATRSALRIGPGDKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVS+VEL KSGAWCVAADFSVGMLAAG R+V KVAGDATRLPF DDVFDAVTISFGL
Sbjct 61 GTAVSSVELAKSGAWCVAADFSVGMLAAGHERRVCKVAGDATRLPFADDVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + AALREMARVTRPGGRL+VCEFSTP +ALFAT YKEYLMRALPRVARAVSSNPE
Sbjct 121 RNVVDFSAALREMARVTRPGGRLVVCEFSTPVSALFATVYKEYLMRALPRVARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQA LA Q+SRAGWS VRWRNLTGGIVALHAGYKP
Sbjct 181 AYVYLAESIRAWPDQAALAQQMSRAGWSAVRWRNLTGGIVALHAGYKP 228
>gi|161611201|ref|NP_962989.2| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
avium subsp. paratuberculosis K-10]
gi|254777016|ref|ZP_05218532.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
avium subsp. avium ATCC 25291]
gi|61217303|sp|Q73SL8.2|UBIE_MYCPA RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
Length=230
Score = 416 bits (1069), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 204/228 (90%), Positives = 216/228 (95%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA LDK+PRDVASMFDGVAR+YDLTNTVLSLGQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct 1 MSRAELDKNPRDVASMFDGVARRYDLTNTVLSLGQDRYWRKATRSALGIGPGQKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR+VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct 61 GTAVSTVELNKSGAWCVAADFSVGMLAAGAARRVPKVAGDATRLPFADDVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QAALREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNP+
Sbjct 121 RNVVDTQAALREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQA LA QI+ AGW+GVRWRNLTGGIVALHA ++P
Sbjct 181 AYVYLAESIRAWPDQAALADQIAGAGWAGVRWRNLTGGIVALHAAHRP 228
>gi|336460468|gb|EGO39363.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
avium subsp. paratuberculosis S397]
Length=296
Score = 416 bits (1068), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 203/228 (90%), Positives = 216/228 (95%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
+SRA LDK+PRDVASMFDGVAR+YDLTNTVLSLGQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct 67 VSRAELDKNPRDVASMFDGVARRYDLTNTVLSLGQDRYWRKATRSALGIGPGQKVLDLAA 126
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR+VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct 127 GTAVSTVELNKSGAWCVAADFSVGMLAAGAARRVPKVAGDATRLPFADDVFDAVTISFGL 186
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QAALREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNP+
Sbjct 187 RNVVDTQAALREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPD 246
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQA LA QI+ AGW+GVRWRNLTGGIVALHA ++P
Sbjct 247 AYVYLAESIRAWPDQAALADQIAGAGWAGVRWRNLTGGIVALHAAHRP 294
>gi|41398986|gb|AAS06605.1| UbiE [Mycobacterium avium subsp. paratuberculosis K-10]
Length=261
Score = 414 bits (1063), Expect = 7e-114, Method: Compositional matrix adjust.
Identities = 203/228 (90%), Positives = 216/228 (95%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
+SRA LDK+PRDVASMFDGVAR+YDLTNTVLSLGQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct 32 VSRAELDKNPRDVASMFDGVARRYDLTNTVLSLGQDRYWRKATRSALGIGPGQKVLDLAA 91
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR+VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct 92 GTAVSTVELNKSGAWCVAADFSVGMLAAGAARRVPKVAGDATRLPFADDVFDAVTISFGL 151
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QAALREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNP+
Sbjct 152 RNVVDTQAALREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPD 211
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQA LA QI+ AGW+GVRWRNLTGGIVALHA ++P
Sbjct 212 AYVYLAESIRAWPDQAALADQIAGAGWAGVRWRNLTGGIVALHAAHRP 259
>gi|240169238|ref|ZP_04747897.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
kansasii ATCC 12478]
Length=232
Score = 413 bits (1061), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 205/230 (90%), Positives = 216/230 (94%), Gaps = 0/230 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRAALDK+PRDVASMFDGVAR+YDLTNTVLS+G+DRYWRRATRSALRIGPG VLDLAA
Sbjct 1 MSRAALDKNPRDVASMFDGVARRYDLTNTVLSVGRDRYWRRATRSALRIGPGDTVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAG ARKVPKVAGDATRLPF D VFDAVTISFGL
Sbjct 61 GTAVSTVELAKSGAWCVAADFSVGMLAAGGARKVPKVAGDATRLPFADGVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNVA+ AALREMARVTRPGG+L+VCEF+TPT+ALFAT YKEYLMRALPRVARAVSSNP+
Sbjct 121 RNVADFPAALREMARVTRPGGQLVVCEFATPTSALFATVYKEYLMRALPRVARAVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGK 230
AY YLAESIRAWPDQA LA ISRAGWS VRWRNLTGGIVALHAGYKPG+
Sbjct 181 AYVYLAESIRAWPDQASLAGHISRAGWSAVRWRNLTGGIVALHAGYKPGE 230
>gi|118463483|ref|YP_883713.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
avium 104]
gi|118164770|gb|ABK65667.1| menaquinone biosynthesis methyltransferase UbiE [Mycobacterium
avium 104]
Length=247
Score = 413 bits (1061), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 203/228 (90%), Positives = 216/228 (95%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
+SRA LDK+PRDVASMFDGVAR+YDLTNTVLSLGQDRYWR+ATRSAL IGPGQKVLDLAA
Sbjct 18 VSRAELDKNPRDVASMFDGVARRYDLTNTVLSLGQDRYWRKATRSALGIGPGQKVLDLAA 77
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR+VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct 78 GTAVSTVELNKSGAWCVAADFSVGMLAAGAARRVPKVAGDATRLPFADDVFDAVTISFGL 137
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QAALREMARVTRPGGRL+VCEFSTP+NALFAT YKEYLMRALPRVARAVSSNP+
Sbjct 138 RNVVDTQAALREMARVTRPGGRLVVCEFSTPSNALFATVYKEYLMRALPRVARAVSSNPD 197
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQA LA QI+ AGW+GVRWRNLTGGIVALHA ++P
Sbjct 198 AYVYLAESIRAWPDQAALADQIAGAGWAGVRWRNLTGGIVALHAAHRP 245
>gi|254818360|ref|ZP_05223361.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
intracellulare ATCC 13950]
Length=230
Score = 409 bits (1050), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 200/228 (88%), Positives = 212/228 (93%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA LDKDPRDVASMFDGVAR+YDLTNTVLS+GQDR+WR+ATR+AL IGPGQ+VLDLAA
Sbjct 1 MSRAELDKDPRDVASMFDGVARRYDLTNTVLSMGQDRHWRKATRAALEIGPGQRVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAGAAR VPKVAGDATRLPF DDVFDAVTISFGL
Sbjct 61 GTAVSTVELKKSGAWCVAADFSVGMLAAGAARHVPKVAGDATRLPFADDVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QAALREMARVTRPGGRL+VCEFSTPTN LFAT YKEYLMRALPRVARAVSSNPE
Sbjct 121 RNVVDTQAALREMARVTRPGGRLVVCEFSTPTNGLFATVYKEYLMRALPRVARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAW DQ LA Q+++AGW GVRWRNLTGGIVALHAG+ P
Sbjct 181 AYVYLAESIRAWRDQEGLAQQLTQAGWVGVRWRNLTGGIVALHAGHLP 228
>gi|289568486|ref|ZP_06448713.1| ubiquinone/menaquinone biosynthesis methyltransferase menH [Mycobacterium
tuberculosis T17]
gi|289542240|gb|EFD45888.1| ubiquinone/menaquinone biosynthesis methyltransferase menH [Mycobacterium
tuberculosis T17]
Length=251
Score = 396 bits (1018), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 198/198 (100%), Positives = 198/198 (100%), Gaps = 0/198 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct 37 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 96
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL
Sbjct 97 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 156
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE
Sbjct 157 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 216
Query 181 AYEYLAESIRAWPDQAVL 198
AYEYLAESIRAWPDQAVL
Sbjct 217 AYEYLAESIRAWPDQAVL 234
>gi|118470851|ref|YP_885509.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
smegmatis str. MC2 155]
gi|166234727|sp|A0QRH1.1|UBIE_MYCS2 RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|118172138|gb|ABK73034.1| menaquinone biosynthesis methyltransferase UbiE [Mycobacterium
smegmatis str. MC2 155]
Length=229
Score = 389 bits (1000), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 188/228 (83%), Positives = 205/228 (90%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA+L+K+P DVASMFD VA++YDLTNTVLSLGQDR+WRR T+SALRIGP KVLDLAA
Sbjct 1 MSRASLEKNPHDVASMFDAVAKRYDLTNTVLSLGQDRFWRRETKSALRIGPADKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAGA+R+VPKVAGDATRLPF D+VFDAVTISFGL
Sbjct 61 GTAVSTVELAKSGAWCVAADFSVGMLAAGASRQVPKVAGDATRLPFADEVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + +A LREMARVT+PGGRL+VCEFSTPTN LF+T YKEYLM+ALP +A AVSSNPE
Sbjct 121 RNVVDHKAGLREMARVTKPGGRLVVCEFSTPTNRLFSTVYKEYLMKALPAMATAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWP QA LA QI AGWS VRWRNLTGGIVALHA KP
Sbjct 181 AYVYLAESIRAWPTQAELARQIGEAGWSDVRWRNLTGGIVALHAATKP 228
>gi|161723263|ref|NP_302480.2| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
leprae TN]
gi|48474633|sp|Q9CBA8.2|UBIE_MYCLE RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
Length=230
Score = 388 bits (997), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 191/228 (84%), Positives = 203/228 (90%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRAALDKDPRDV +MFD VA +YDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct 1 MSRAALDKDPRDVVAMFDDVAHRYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVST EL+KSGAWCVAADFSV MLA G ARKVPKVA DAT+LPF D VFDAVTISFGL
Sbjct 61 GTAVSTAELSKSGAWCVAADFSVRMLATGGARKVPKVAADATQLPFSDGVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+A+ QAALREMARVTRPGG+L+VCEFSTPTNAL A Y EYLMRALP+VAR VSSNP+
Sbjct 121 RNIADYQAALREMARVTRPGGQLVVCEFSTPTNALVANVYTEYLMRALPQVARLVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQ LA Q+SR GW+ RWRNLTGGIVALHA KP
Sbjct 181 AYIYLAESIRAWPDQVTLACQLSRTGWASPRWRNLTGGIVALHAADKP 228
>gi|221230694|ref|YP_002504110.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
leprae Br4923]
gi|13093910|emb|CAC31789.1| putative ubiquinone/menaquinone biosynthesis methyltransferase
[Mycobacterium leprae]
gi|219933801|emb|CAR72371.1| putative ubiquinone/menaquinone biosynthesis methyltransferase
[Mycobacterium leprae Br4923]
Length=238
Score = 386 bits (991), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 190/228 (84%), Positives = 203/228 (90%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
+SRAALDKDPRDV +MFD VA +YDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA
Sbjct 9 VSRAALDKDPRDVVAMFDDVAHRYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 68
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVST EL+KSGAWCVAADFSV MLA G ARKVPKVA DAT+LPF D VFDAVTISFGL
Sbjct 69 GTAVSTAELSKSGAWCVAADFSVRMLATGGARKVPKVAADATQLPFSDGVFDAVTISFGL 128
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+A+ QAALREMARVTRPGG+L+VCEFSTPTNAL A Y EYLMRALP+VAR VSSNP+
Sbjct 129 RNIADYQAALREMARVTRPGGQLVVCEFSTPTNALVANVYTEYLMRALPQVARLVSSNPD 188
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQ LA Q+SR GW+ RWRNLTGGIVALHA KP
Sbjct 189 AYIYLAESIRAWPDQVTLACQLSRTGWASPRWRNLTGGIVALHAADKP 236
>gi|120401998|ref|YP_951827.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
vanbaalenii PYR-1]
gi|166234732|sp|A1T3S1.1|UBIE_MYCVP RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|119954816|gb|ABM11821.1| demethylmenaquinone methyltransferase [Mycobacterium vanbaalenii
PYR-1]
Length=228
Score = 381 bits (979), Expect = 4e-104, Method: Compositional matrix adjust.
Identities = 188/227 (83%), Positives = 201/227 (89%), Gaps = 0/227 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M+RA+L+KDP +VASMFDGVAR+YDLTNTVLSLGQDR+WRRATR AL++ P KVLDLAA
Sbjct 1 MNRASLEKDPHEVASMFDGVARRYDLTNTVLSLGQDRFWRRATREALQLSPSDKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL SGAWCVAADFSVGMLAAGAAR VPKVAGDATRLPF D VFDAVTISFGL
Sbjct 61 GTAVSTVELAGSGAWCVAADFSVGMLAAGAARDVPKVAGDATRLPFADGVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + A LREMARVTRPGGRL+VCEFSTPTN LFAT YKEYLMRALP +A AVSSNP+
Sbjct 121 RNVVDHSAGLREMARVTRPGGRLVVCEFSTPTNKLFATVYKEYLMRALPAMASAVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYK 227
AY YLAESIRAWPDQA LA +I AGWS VRWRNLTGGIVALHA K
Sbjct 181 AYVYLAESIRAWPDQAELAARIEAAGWSDVRWRNLTGGIVALHAATK 227
>gi|145225832|ref|YP_001136510.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
gilvum PYR-GCK]
gi|189037024|sp|A4T183.1|UBIE_MYCGI RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|145218318|gb|ABP47722.1| demethylmenaquinone methyltransferase [Mycobacterium gilvum PYR-GCK]
Length=228
Score = 377 bits (968), Expect = 7e-103, Method: Compositional matrix adjust.
Identities = 184/228 (81%), Positives = 202/228 (89%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M+RA+L+K+P +VASMFDGVAR+YDLTNTVLSLGQDR+WRRATR AL++ P KVLDLAA
Sbjct 1 MNRASLEKNPHEVASMFDGVARRYDLTNTVLSLGQDRFWRRATREALQLSPADKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL SGAWCVAADFSVGMLAAGA+R+VPKVAGDATRLPF D VFDAVTISFGL
Sbjct 61 GTAVSTVELASSGAWCVAADFSVGMLAAGASRRVPKVAGDATRLPFDDGVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + A LREMARVTRPGGRL+VCEFSTPTN LF+T YKEYLM+ALP +A AVSSNP+
Sbjct 121 RNVVDFSAGLREMARVTRPGGRLVVCEFSTPTNGLFSTVYKEYLMKALPAMATAVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQ LA +I AGWS VRWRNLTGGIVALHA KP
Sbjct 181 AYVYLAESIRAWPDQRALARRIEAAGWSDVRWRNLTGGIVALHAATKP 228
>gi|315442460|ref|YP_004075339.1| demethylmenaquinone methyltransferase [Mycobacterium sp. Spyr1]
gi|315260763|gb|ADT97504.1| demethylmenaquinone methyltransferase [Mycobacterium sp. Spyr1]
Length=228
Score = 377 bits (967), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 183/228 (81%), Positives = 202/228 (89%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M+RA+L+K+P +VASMFDGVAR+YDLTNTVLSLGQDR+WRRATR AL++ P KVLDLAA
Sbjct 1 MNRASLEKNPHEVASMFDGVARRYDLTNTVLSLGQDRFWRRATREALQLSPADKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL SGAWCVAADFSVGMLAAGA+R+VPKVAGDATRLPF D VFDAVTISFGL
Sbjct 61 GTAVSTVELASSGAWCVAADFSVGMLAAGASRRVPKVAGDATRLPFDDGVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + A LREMARVTRPGGRL+VCEFSTPTN +F+T YKEYLM+ALP +A AVSSNP+
Sbjct 121 RNVVDFSAGLREMARVTRPGGRLVVCEFSTPTNGMFSTVYKEYLMKALPAMATAVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQ LA +I AGWS VRWRNLTGGIVALHA KP
Sbjct 181 AYVYLAESIRAWPDQRALARRIEAAGWSDVRWRNLTGGIVALHAATKP 228
>gi|126433368|ref|YP_001069059.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
sp. JLS]
gi|166234728|sp|A3PUJ1.1|UBIE_MYCSJ RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|126233168|gb|ABN96568.1| demethylmenaquinone methyltransferase [Mycobacterium sp. JLS]
Length=230
Score = 371 bits (953), Expect = 4e-101, Method: Compositional matrix adjust.
Identities = 184/228 (81%), Positives = 198/228 (87%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA LDK+P +VASMFD VAR+YDLTNTVLSLGQDR+WRR T +AL IGPG KVLDLAA
Sbjct 1 MSRATLDKNPHEVASMFDAVARRYDLTNTVLSLGQDRFWRRETCAALGIGPGDKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL SGAWCVAADFSVGML+AG R VPKVAGDATRLPF D+ FDAVTISFGL
Sbjct 61 GTAVSTVELAASGAWCVAADFSVGMLSAGRQRDVPKVAGDATRLPFADESFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + A L EMARVTRPGGRL+VCEFSTPTN FAT YKEYLM+ALPR+ARAV+SNP+
Sbjct 121 RNVVDHVAGLEEMARVTRPGGRLVVCEFSTPTNRAFATLYKEYLMKALPRMARAVASNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQA LA +I AGWS VRWRNLTGGIVALHA KP
Sbjct 181 AYVYLAESIRAWPDQAGLARRIEAAGWSQVRWRNLTGGIVALHAAVKP 228
>gi|333989192|ref|YP_004521806.1| ubiquinone/menaquinone methyltransferase MenH [Mycobacterium
sp. JDM601]
gi|333485160|gb|AEF34552.1| ubiquinone/menaquinone methyltransferase MenH [Mycobacterium
sp. JDM601]
Length=230
Score = 371 bits (953), Expect = 4e-101, Method: Compositional matrix adjust.
Identities = 185/227 (82%), Positives = 199/227 (88%), Gaps = 0/227 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA+LDKDP VA+MFDGVAR+YDLTNTV+SLG+DR WRRATR AL + PG+KVLDLAA
Sbjct 1 MSRASLDKDPHAVAAMFDGVARRYDLTNTVMSLGRDRAWRRATRKALALQPGEKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVAADFSVGMLAAG R VPKVAGDAT+LPFGD VFDAVTISFGL
Sbjct 61 GTAVSTVELAKSGAWCVAADFSVGMLAAGHKRDVPKVAGDATKLPFGDAVFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + A LREMARVT+ GGRL+VCEFSTP +FATAYKEYLMRALP VARAVSSNPE
Sbjct 121 RNVVDHVAGLREMARVTKAGGRLVVCEFSTPRIPVFATAYKEYLMRALPAVARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYK 227
AY YLAESIRAWPDQA LA QI +AGWS V WRNLTGGIVALH+ K
Sbjct 181 AYVYLAESIRAWPDQAALAEQIGQAGWSDVGWRNLTGGIVALHSARK 227
>gi|108797742|ref|YP_637939.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
sp. MCS]
gi|119866831|ref|YP_936783.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mycobacterium
sp. KMS]
gi|122977410|sp|Q1BE01.1|UBIE_MYCSS RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|166234729|sp|A1UAY5.1|UBIE_MYCSK RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|108768161|gb|ABG06883.1| demethylmenaquinone methyltransferase [Mycobacterium sp. MCS]
gi|119692920|gb|ABL89993.1| demethylmenaquinone methyltransferase [Mycobacterium sp. KMS]
Length=230
Score = 370 bits (949), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 183/228 (81%), Positives = 198/228 (87%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA LDK+P +VASMFD VAR+YDLTNTVLSLGQDR+WRR T +AL IGPG +VLDLAA
Sbjct 1 MSRATLDKNPHEVASMFDAVARRYDLTNTVLSLGQDRFWRRETCAALGIGPGDRVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL SGAWCVAADFSVGML+AG R VPKVAGDATRLPF D+ FDAVTISFGL
Sbjct 61 GTAVSTVELAASGAWCVAADFSVGMLSAGRQRDVPKVAGDATRLPFADESFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + A L EMARVTRPGGRL+VCEFSTPTN FAT YKEYLM+ALPR+ARAV+SNP+
Sbjct 121 RNVVDHVAGLEEMARVTRPGGRLVVCEFSTPTNRAFATLYKEYLMKALPRMARAVASNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQA LA +I AGWS VRWRNLTGGIVALHA KP
Sbjct 181 AYVYLAESIRAWPDQAGLARRIEAAGWSQVRWRNLTGGIVALHAAVKP 228
>gi|169631009|ref|YP_001704658.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE [Mycobacterium
abscessus ATCC 19977]
gi|254789945|sp|B1MHC3.1|UBIE_MYCA9 RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|169242976|emb|CAM64004.1| Ubiquinone/menaquinone biosynthesis methlytransferase UbiE [Mycobacterium
abscessus]
Length=227
Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/223 (79%), Positives = 190/223 (86%), Gaps = 0/223 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M+RA L+KDP +VASMFD VAR+YD+TNTVLS G+DR+WRRATR ALR+ PG KVLD+AA
Sbjct 1 MNRATLEKDPHEVASMFDAVARRYDITNTVLSFGRDRFWRRATREALRLKPGDKVLDIAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVST ELT+SGAWCVAADFSVGML AGA R VPKVAGDATRLPF D FDAVTISFGL
Sbjct 61 GTAVSTAELTQSGAWCVAADFSVGMLKAGARRDVPKVAGDATRLPFADHSFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + LREMARVT+PGGRL VCEFSTP N F T Y EYLM+ LP VARAVSSNP+
Sbjct 121 RNVVDHVEGLREMARVTKPGGRLAVCEFSTPVNRPFRTLYMEYLMKTLPEVARAVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH 223
AY YLAESIRAWPDQ LAHQI+ AGWS VRWRNLTGGIVALH
Sbjct 181 AYVYLAESIRAWPDQEALAHQIASAGWSNVRWRNLTGGIVALH 223
>gi|54027103|ref|YP_121345.1| ubiquinone/menaquinone biosynthesis methyltransferase [Nocardia
farcinica IFM 10152]
gi|61217205|sp|Q5YPB0.1|UBIE_NOCFA RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|54018611|dbj|BAD59981.1| putative ubiquinone/menaquinone methyltransferase [Nocardia farcinica
IFM 10152]
Length=237
Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 161/227 (71%), Positives = 190/227 (84%), Gaps = 0/227 (0%)
Query 3 RAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGT 62
RA+LDK P +VASMFDGVA +YDLTNTV+S+GQDRYWR ATR AL + PG++VLDLAAGT
Sbjct 11 RASLDKQPHEVASMFDGVAERYDLTNTVISMGQDRYWRWATRKALALRPGERVLDLAAGT 70
Query 63 AVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRN 122
VSTVE KSGAWCVAADFS GMLAAG+ R+VP VAGDA LPF D+ FDAV IS+GLRN
Sbjct 71 GVSTVEFAKSGAWCVAADFSKGMLAAGSFREVPMVAGDAMALPFADESFDAVAISYGLRN 130
Query 123 VANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAY 182
VA+ A+REM RVT+PGGRL++ EFSTP +F T Y EYLM+ALPRVARAVSSNP+AY
Sbjct 131 VADPDLAMREMLRVTKPGGRLVIAEFSTPVIPVFRTVYMEYLMKALPRVARAVSSNPDAY 190
Query 183 EYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPG 229
YLAES+RAWP+Q LA +++ AGWS V+WRNL+GG+VALH GY+ G
Sbjct 191 VYLAESVRAWPNQRQLAMRMAAAGWSSVQWRNLSGGVVALHRGYRLG 237
>gi|111018986|ref|YP_701958.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodococcus
jostii RHA1]
gi|110818516|gb|ABG93800.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Rhodococcus
jostii RHA1]
Length=232
Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 162/222 (73%), Positives = 184/222 (83%), Gaps = 0/222 (0%)
Query 2 SRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAG 61
SRA+L+KDP +VASMFDGVA++YDLTNT+LS GQDR WR+ATRSAL + PG++VLDLAAG
Sbjct 7 SRASLEKDPHEVASMFDGVAKRYDLTNTILSFGQDRSWRKATRSALALKPGERVLDLAAG 66
Query 62 TAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLR 121
T VSTVEL +SGAWCVA DFS GML AG+ R VP VAGDA LP+ D VFDA TISFGLR
Sbjct 67 TGVSTVELGRSGAWCVATDFSKGMLQAGSGRHVPMVAGDAMHLPYADAVFDAATISFGLR 126
Query 122 NVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEA 181
NV++ A LRE+ARVT+PGGRL+V EFSTP F T Y EYLMRALPRVARAVSSNP+A
Sbjct 127 NVSDFDAGLREIARVTKPGGRLVVSEFSTPVFGPFRTVYMEYLMRALPRVARAVSSNPDA 186
Query 182 YEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH 223
Y YLAESIRAWP Q LA +I AGW V+WRNLTGG+VALH
Sbjct 187 YVYLAESIRAWPTQQELALRIEAAGWRNVQWRNLTGGVVALH 228
>gi|226361081|ref|YP_002778859.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodococcus
opacus B4]
gi|226239566|dbj|BAH49914.1| menaquinone biosynthesis methyltransferase MenH [Rhodococcus
opacus B4]
Length=232
Score = 330 bits (847), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 161/222 (73%), Positives = 184/222 (83%), Gaps = 0/222 (0%)
Query 2 SRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAG 61
SRA+L+KDP +VASMFDGVA++YDLTNT+LS GQDR WR+ATRSAL + PG++VLDLAAG
Sbjct 7 SRASLEKDPHEVASMFDGVAKRYDLTNTILSFGQDRSWRKATRSALALKPGERVLDLAAG 66
Query 62 TAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLR 121
T VSTVEL +SGAWCVA DFS GML AG+ R VP VAGDA LP+ D VFDA TISFGLR
Sbjct 67 TGVSTVELGRSGAWCVATDFSKGMLQAGSGRHVPMVAGDAMHLPYADAVFDAATISFGLR 126
Query 122 NVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEA 181
NV++ A LRE+ARVT+PGGRL+V EFSTP F T Y EYLM+ALPRVARAVSSNP+A
Sbjct 127 NVSDFDAGLREIARVTKPGGRLVVSEFSTPVFGPFRTVYMEYLMKALPRVARAVSSNPDA 186
Query 182 YEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH 223
Y YLAESIRAWP Q LA +I AGW V+WRNLTGG+VALH
Sbjct 187 YVYLAESIRAWPTQQELALRIEAAGWRNVQWRNLTGGVVALH 228
>gi|333918066|ref|YP_004491647.1| Menaquinone biosynthesis methyltransferase ubiE [Amycolicicoccus
subflavus DQS3-9A1]
gi|333480287|gb|AEF38847.1| Menaquinone biosynthesis methyltransferase ubiE [Amycolicicoccus
subflavus DQS3-9A1]
Length=236
Score = 330 bits (847), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 164/223 (74%), Positives = 186/223 (84%), Gaps = 0/223 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
+ RA LDK+P DVASMFDGVAR+YD+TNTVLS G+DR WR+ATR ALR+ PG+ VLDLAA
Sbjct 9 LLRATLDKNPHDVASMFDGVARRYDVTNTVLSFGRDRVWRKATRRALRLQPGESVLDLAA 68
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GT VSTVELT+SGAW VAADFS GML AG R+VP VAGDA LPF D+ FDA TISFGL
Sbjct 69 GTGVSTVELTRSGAWVVAADFSKGMLQAGRFRRVPMVAGDALHLPFADESFDAATISFGL 128
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + AAL E+ RVT+ GGRL+VCEFSTP +F+TAY EYLMRALP VARAVSSNP+
Sbjct 129 RNVIDIDAALAELRRVTKRGGRLVVCEFSTPVVPVFSTAYMEYLMRALPAVARAVSSNPD 188
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH 223
AY YLAESIRAWPDQA LA +I +GWS V+WRNLTGG+VALH
Sbjct 189 AYVYLAESIRAWPDQAGLARRIVASGWSDVQWRNLTGGVVALH 231
>gi|312141026|ref|YP_004008362.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase ubie [Rhodococcus
equi 103S]
gi|325675337|ref|ZP_08155021.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Rhodococcus
equi ATCC 33707]
gi|311890365|emb|CBH49683.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase UbiE [Rhodococcus
equi 103S]
gi|325553308|gb|EGD22986.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Rhodococcus
equi ATCC 33707]
Length=244
Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/222 (73%), Positives = 183/222 (83%), Gaps = 0/222 (0%)
Query 2 SRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAG 61
SRA+L+K P +VASMFDGVA++YDLTNTVLS GQDR WR+ATR+AL + PG++VLDLAAG
Sbjct 19 SRASLEKKPHEVASMFDGVAKRYDLTNTVLSFGQDRSWRKATRAALDLEPGERVLDLAAG 78
Query 62 TAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLR 121
T VSTVEL +SGAW VA DFS GML AG R+VP VAGDA LP+GD VFDA TISFGLR
Sbjct 79 TGVSTVELGRSGAWVVATDFSKGMLQAGIDRRVPMVAGDAMHLPYGDAVFDAATISFGLR 138
Query 122 NVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEA 181
NV++ A LRE+ARVT+PGGRL+V EFSTP F T Y EYLM+ALPRVARAVSSNP+A
Sbjct 139 NVSDFDAGLREIARVTKPGGRLVVSEFSTPVFGPFRTVYMEYLMKALPRVARAVSSNPDA 198
Query 182 YEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH 223
Y YLAESIRAWP Q LA +I AGW V+WRNLTGGIVALH
Sbjct 199 YVYLAESIRAWPTQEQLAGRIEAAGWKNVQWRNLTGGIVALH 240
>gi|226305196|ref|YP_002765154.1| menaquinone biosynthesis methyltransferase MenH [Rhodococcus
erythropolis PR4]
gi|229490547|ref|ZP_04384385.1| menaquinone biosynthesis methyltransferase UbiE [Rhodococcus
erythropolis SK121]
gi|226184311|dbj|BAH32415.1| menaquinone biosynthesis methyltransferase MenH [Rhodococcus
erythropolis PR4]
gi|229322367|gb|EEN88150.1| menaquinone biosynthesis methyltransferase UbiE [Rhodococcus
erythropolis SK121]
Length=232
Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/222 (72%), Positives = 181/222 (82%), Gaps = 0/222 (0%)
Query 2 SRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAG 61
+RA L+K P +VASMFD VA +YDLTNTVLS GQD+ WR+ATR AL + PG+KVLDLAAG
Sbjct 7 TRATLEKQPHEVASMFDDVAERYDLTNTVLSFGQDKGWRKATREALDLKPGEKVLDLAAG 66
Query 62 TAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLR 121
T VSTVEL +SGAWCVA DFS GML AG +RKVP VAGDA LP+ D+VFDA TISFGLR
Sbjct 67 TGVSTVELGRSGAWCVATDFSKGMLKAGISRKVPMVAGDAMYLPYADNVFDAATISFGLR 126
Query 122 NVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEA 181
NV++ +A LRE+ARVT+PGGRL+V EFSTP F T Y EYLM+ALP+VAR VSSNP+A
Sbjct 127 NVSDFEAGLREIARVTKPGGRLVVSEFSTPVFGPFRTVYMEYLMKALPQVARTVSSNPDA 186
Query 182 YEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH 223
Y YLAESIRAWP Q LA +I AGW V+WRNLTGGIVALH
Sbjct 187 YVYLAESIRAWPTQEELARKIEAAGWKNVKWRNLTGGIVALH 228
>gi|145294623|ref|YP_001137444.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
glutamicum R]
gi|166234718|sp|A4QBE5.1|UBIE_CORGB RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|140844543|dbj|BAF53542.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045790|gb|EGV41459.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
glutamicum S9114]
Length=230
Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/228 (70%), Positives = 182/228 (80%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M++A LDKDP DVASMFD V + YDLTNTVLS GQDR WR+ TR L + PG+KVLDLAA
Sbjct 1 MAKADLDKDPFDVASMFDDVGKNYDLTNTVLSFGQDRVWRKRTRQRLDLKPGEKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGA+CVA DFS GMLAAG R V KV GD +LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTVELAKSGAFCVACDFSQGMLAAGKDRDVSKVVGDGMQLPFADNSFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + +A L+EMARVT+PGGRL V EFSTP +F T YKEYLMR LP+VARAVSSNPE
Sbjct 121 RNIHDFRAGLKEMARVTKPGGRLTVAEFSTPVIPVFGTVYKEYLMRLLPQVARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLA+SIRAWP QA LA +I++ GWS W+NLT GIVALH+ KP
Sbjct 181 AYIYLADSIRAWPSQAELAREINQNGWSDCGWQNLTFGIVALHSAIKP 228
>gi|227502596|ref|ZP_03932645.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
accolens ATCC 49725]
gi|306835163|ref|ZP_07468200.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
accolens ATCC 49726]
gi|227076636|gb|EEI14599.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
accolens ATCC 49725]
gi|304568952|gb|EFM44480.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
accolens ATCC 49726]
Length=234
Score = 324 bits (830), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 160/234 (69%), Positives = 180/234 (77%), Gaps = 0/234 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MS+A LDK P DVA MFD V KYDLTNTVLS GQD+ WR+ TR L + PG+KVLDLAA
Sbjct 1 MSKADLDKKPFDVARMFDAVGEKYDLTNTVLSFGQDKRWRKRTRERLNLQPGEKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVST EL+KSGAWCVA DFS GMLAAG+ R VPKVAGD +LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTEELSKSGAWCVACDFSRGMLAAGSERDVPKVAGDGMKLPFADNTFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + + LREMARVT+PGGRL V EFSTP +F T YKEYLMR LP VAR VSSNP+
Sbjct 121 RNIHDYELGLREMARVTKPGGRLAVAEFSTPIVPVFGTVYKEYLMRLLPPVARVVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGKQTPQ 234
AY YLAESIRAWP Q LA I+R GW+ W+NLT GIVALH+ KP PQ
Sbjct 181 AYIYLAESIRAWPGQEELAAAINRNGWADAGWQNLTLGIVALHSATKPLADAPQ 234
>gi|255324687|ref|ZP_05365801.1| menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
tuberculostearicum SK141]
gi|311739257|ref|ZP_07713094.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255298162|gb|EET77465.1| menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
tuberculostearicum SK141]
gi|311305683|gb|EFQ81749.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
pseudogenitalium ATCC 33035]
Length=229
Score = 323 bits (829), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/228 (71%), Positives = 178/228 (79%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MS+A LDK P DVA MFD V KYDLTNTVLS GQD +WR+ TR L + PG+KVLDLAA
Sbjct 1 MSKADLDKKPFDVARMFDAVGEKYDLTNTVLSFGQDAHWRKRTRERLNLKPGEKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL+KSGAWCVA DFS GMLAAG R VPKVAGD +LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTVELSKSGAWCVACDFSRGMLAAGRERDVPKVAGDGMKLPFADNTFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + + LREMARVT+PGGRL V EFSTP +F T YKEYLMR LP VAR VSSNPE
Sbjct 121 RNIHDFELGLREMARVTKPGGRLAVAEFSTPVVPIFGTVYKEYLMRLLPPVARLVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWP Q LA I+R GW+ W+NLT GIVALH+ KP
Sbjct 181 AYIYLAESIRAWPGQEELAAVINRNGWAEAGWQNLTFGIVALHSAVKP 228
>gi|227505151|ref|ZP_03935200.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
striatum ATCC 6940]
gi|227198264|gb|EEI78312.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
striatum ATCC 6940]
Length=230
Score = 323 bits (829), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 158/228 (70%), Positives = 178/228 (79%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MS+A LDK P DVA MFD V KYD+TNTVLS GQDR WR+ TR L + PG+KVLDLAA
Sbjct 1 MSKADLDKKPFDVAQMFDAVGAKYDITNTVLSFGQDRIWRKRTRERLDLKPGEKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVST EL+KSGAWCVA DFS GMLAAGAAR VPKVAGD +LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTEELSKSGAWCVACDFSRGMLAAGAARDVPKVAGDGMKLPFADNTFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + + LREMARVT+PGGRL V EFS P +F T YKEYL R LP +A+ VSSNPE
Sbjct 121 RNIHDFELGLREMARVTKPGGRLAVAEFSKPIIPVFGTVYKEYLTRLLPPIAKLVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWPDQ LA I+R GW G W+N+T GIVALH+ KP
Sbjct 181 AYVYLAESIRAWPDQEELAAAINRNGWEGAGWKNMTLGIVALHSATKP 228
>gi|324997730|ref|ZP_08118842.1| ubiquinone/menaquinone biosynthesis methyltransferase [Pseudonocardia
sp. P1]
Length=230
Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/229 (73%), Positives = 179/229 (79%), Gaps = 1/229 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA LDKDP DVA MFDGVAR+YDLTNT +S GQDRYWR TR AL + PG+KVLDLAA
Sbjct 1 MSRAELDKDPHDVARMFDGVARRYDLTNTAMSGGQDRYWRVQTRRALALSPGEKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL K GAWCVAADFS+GML AGA R VPK A DA LPF D FDAVTISFGL
Sbjct 61 GTAVSTVELAKDGAWCVAADFSLGMLRAGAHRDVPKAAADALHLPFADASFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYK-EYLMRALPRVARAVSSNP 179
RNVA+ A LREMARVTRPGGRL+VCEFSTPT A F Y+ L +P VAR VSSNP
Sbjct 121 RNVADTVAGLREMARVTRPGGRLVVCEFSTPTWAPFRALYQGAVLGHLIPTVARTVSSNP 180
Query 180 EAYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
+AY YLAESIR WPDQA L+ +I+ AGW V WRNLT G VALH YKP
Sbjct 181 DAYLYLAESIRDWPDQAALSQKIADAGWERVAWRNLTVGAVALHRAYKP 229
>gi|19551714|ref|NP_599716.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
glutamicum ATCC 13032]
gi|62389369|ref|YP_224771.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
glutamicum ATCC 13032]
gi|45593587|sp|Q8NT39.1|UBIE_CORGL RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|21323236|dbj|BAB97864.1| Methylase involved in ubiquinone/menaquinone biosynthesis [Corynebacterium
glutamicum ATCC 13032]
gi|41324703|emb|CAF19185.1| UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFER [Corynebacterium
glutamicum ATCC 13032]
Length=230
Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/228 (70%), Positives = 181/228 (80%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M++A LDKDP DVASMFD V + YDLTNTVLS GQDR WR+ TR L + PG+KVLDLAA
Sbjct 1 MAKADLDKDPFDVASMFDDVGKNYDLTNTVLSFGQDRVWRKRTRQRLDLKPGEKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGA+CVA DFS GMLAAG R V KV GD +LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTVELAKSGAFCVACDFSQGMLAAGKDRDVSKVVGDGMQLPFADNSFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + +A L+EMARVT+PGGRL V EFSTP +F T YKEYLMR LP+ ARAVSSNPE
Sbjct 121 RNIHDFRAGLKEMARVTKPGGRLTVAEFSTPVIPVFGTVYKEYLMRLLPQAARAVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLA+SIRAWP QA LA +I++ GWS W+NLT GIVALH+ KP
Sbjct 181 AYIYLADSIRAWPSQAELAREINQNGWSDCGWQNLTFGIVALHSAIKP 228
>gi|296119173|ref|ZP_06837743.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
ammoniagenes DSM 20306]
gi|295967799|gb|EFG81054.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
ammoniagenes DSM 20306]
Length=229
Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 157/226 (70%), Positives = 177/226 (79%), Gaps = 0/226 (0%)
Query 3 RAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGT 62
+A L+K P DVASMFD V KYD+TNTVLS GQDR WR+ TR L + PG+KVLDLAAGT
Sbjct 4 KADLNKKPFDVASMFDAVGEKYDITNTVLSFGQDRRWRKLTRQRLNLKPGEKVLDLAAGT 63
Query 63 AVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGLRN 122
AVSTVEL+KSGAWCVA DFS GMLAAG R VPKVAGD RLPF D FDAVTIS+GLRN
Sbjct 64 AVSTVELSKSGAWCVACDFSRGMLAAGEDRNVPKVAGDGMRLPFADSTFDAVTISYGLRN 123
Query 123 VANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPEAY 182
+ + + LREMARVT+PGGRL V EFS P +F T YKEYLMR LP +AR VSSNP+AY
Sbjct 124 IHDFELGLREMARVTKPGGRLAVAEFSKPVIPVFGTFYKEYLMRLLPPMARLVSSNPDAY 183
Query 183 EYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
YLAESIRAWP+Q LA I+R GW+ W+NLTGGIVALH+ KP
Sbjct 184 IYLAESIRAWPEQEALAAIINRNGWTDAGWQNLTGGIVALHSAIKP 229
>gi|340795374|ref|YP_004760837.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
variabile DSM 44702]
gi|340535284|gb|AEK37764.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
variabile DSM 44702]
Length=231
Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/228 (72%), Positives = 180/228 (79%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA+L+KDP DVASMFD V + YDLTNTVLS GQDR WR+ TR L +GPG KVLDLAA
Sbjct 1 MSRASLEKDPHDVASMFDAVGKNYDLTNTVLSFGQDRLWRKRTRRRLGLGPGDKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL +SGAWCVA DFS GMLAAG R VPKV GD LPF D+ FDAVTISFGL
Sbjct 61 GTAVSTVELAESGAWCVACDFSQGMLAAGRDRDVPKVCGDGMNLPFADNTFDAVTISFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + A LREMARVTRPGG+L VCEFSTP +F+T YKEYLMRALP VA+AVSSN E
Sbjct 121 RNIVDPAAGLREMARVTRPGGKLTVCEFSTPVVPVFSTVYKEYLMRALPAVAKAVSSNAE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWP+Q LA ++ GW G W+NLT GI ALH+ KP
Sbjct 181 AYVYLAESIRAWPEQEELATIVNDNGWEGCGWQNLTFGITALHSATKP 228
>gi|334696089|gb|AEG80886.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
ulcerans 809]
Length=232
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/229 (68%), Positives = 179/229 (79%), Gaps = 0/229 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M++A+L+K+P DVA MFDGV + YD+TNTVLS GQDR WR TR L + PG++VLDLAA
Sbjct 1 MAKASLEKNPFDVAKMFDGVGKNYDITNTVLSFGQDRKWREKTRERLNLKPGERVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAW VA DFS GMLAAG R VPKV GD +LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTVELKKSGAWVVACDFSQGMLAAGKDRDVPKVVGDGMQLPFADNSFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QAALREMARVT+PGGRL + EFSTP F T YKEYL R LP +A+AV +NPE
Sbjct 121 RNVHDYQAALREMARVTKPGGRLTIAEFSTPNVPGFKTIYKEYLTRLLPLIAKAVGTNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPG 229
AYEYLAESIRAWP++ LA I+ GWS W+NL+ GIVALH+ KPG
Sbjct 181 AYEYLAESIRAWPEREELARAINNNGWSDAGWQNLSLGIVALHSAVKPG 229
>gi|337289966|ref|YP_004628987.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
ulcerans BR-AD22]
gi|334698272|gb|AEG83068.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
ulcerans BR-AD22]
Length=232
Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/229 (68%), Positives = 179/229 (79%), Gaps = 0/229 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M++A+L+K+P DVA MFDGV + YD+TNTVLS GQDR WR TR L + PG++VLDLAA
Sbjct 1 MAKASLEKNPFDVAKMFDGVGKNYDITNTVLSFGQDRKWREKTRERLNLKPGERVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAW VA DFS GMLAAG R VPKV GD +LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTVELKKSGAWVVACDFSQGMLAAGKDRDVPKVVGDGMQLPFTDNSFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QAALREMARVT+PGGRL + EFSTP F T YKEYL R LP +A+AV +NPE
Sbjct 121 RNVHDYQAALREMARVTKPGGRLTIAEFSTPNVPGFKTIYKEYLTRLLPLIAKAVGTNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPG 229
AYEYLAESIRAWP++ LA I+ GWS W+NL+ GIVALH+ KPG
Sbjct 181 AYEYLAESIRAWPEREELARAINNNGWSDAGWQNLSLGIVALHSAVKPG 229
>gi|227832178|ref|YP_002833885.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
aurimucosum ATCC 700975]
gi|262183970|ref|ZP_06043391.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
aurimucosum ATCC 700975]
gi|254789916|sp|C3PKL1.1|UBIE_CORA7 RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
gi|227453194|gb|ACP31947.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
aurimucosum ATCC 700975]
Length=229
Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/228 (69%), Positives = 176/228 (78%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MS+A L+K P DVA MFD V +KYD+TNTVLS GQD WRR TR L PG+KVLDLAA
Sbjct 1 MSKADLEKKPFDVARMFDAVGKKYDITNTVLSFGQDARWRRLTRERLNPQPGEKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVST EL+KSGAWCVA DFS+GMLAAGA R VPKVAGD RLPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTEELSKSGAWCVACDFSLGMLAAGAERDVPKVAGDGMRLPFADNTFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + + LREMARVT+PGGRL V EFS P +F T YKEYL R LP +A+ VSSNPE
Sbjct 121 RNIHDFELGLREMARVTKPGGRLAVAEFSKPVIPVFGTVYKEYLTRLLPPIAKVVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIRAWP+Q LA I+R GW WRNLT GIVALH+ KP
Sbjct 181 AYIYLAESIRAWPEQHELAAAINRNGWEQAGWRNLTFGIVALHSAVKP 228
>gi|161485998|ref|NP_737091.2| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
efficiens YS-314]
gi|48474467|sp|Q8FSB3.2|UBIE_COREF RecName: Full=Demethylmenaquinone methyltransferase; AltName:
Full=Menaquinone biosynthesis methyltransferase ubiE
Length=230
Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 163/230 (71%), Positives = 181/230 (79%), Gaps = 0/230 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M++A+LDKDP DVASMFD V KYDLTNTVLS GQDR WRR TR L + PG+KVLDLAA
Sbjct 1 MAKASLDKDPFDVASMFDDVGDKYDLTNTVLSFGQDRVWRRRTRERLDLKPGEKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVA DFS GMLAAG R VP V GD LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTVELAKSGAWCVACDFSQGMLAAGKHRNVPMVVGDGMTLPFADNSFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + +A LREMARVT+PGGRL V EFSTP +F T YKEYLMR LP+VAR VSSNPE
Sbjct 121 RNIHDFRAGLREMARVTKPGGRLTVAEFSTPVIPVFGTLYKEYLMRLLPKVARVVSSNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGK 230
AY YLAESIRAWPDQ LA +I+ GWS W+NLT GIVA+H+ KPG
Sbjct 181 AYIYLAESIRAWPDQEDLAREINANGWSDCGWQNLTFGIVAMHSAIKPGN 230
>gi|300857716|ref|YP_003782699.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
pseudotuberculosis FRC41]
gi|300685170|gb|ADK28092.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
pseudotuberculosis FRC41]
gi|302205458|gb|ADL09800.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
pseudotuberculosis C231]
gi|302330011|gb|ADL20205.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
pseudotuberculosis 1002]
gi|308275694|gb|ADO25593.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
pseudotuberculosis I19]
Length=232
Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/228 (68%), Positives = 178/228 (79%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M++A+L+K+P DVA MFDGV + YD+TNTVLS GQDR WR TR L + PG++VLDLAA
Sbjct 1 MAKASLEKNPFDVAKMFDGVGKNYDITNTVLSFGQDRKWREKTRERLNLQPGERVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAW VA DFS GMLAAG R VPKV GD +LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTVELGKSGAWVVACDFSQGMLAAGKERDVPKVVGDGMQLPFADNSFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QAALREMARVT+PGGRL + EFSTP F T YKEYL R LP +A+AV +NPE
Sbjct 121 RNVHDFQAALREMARVTKPGGRLTIAEFSTPNVPGFKTIYKEYLTRLLPLIAKAVGTNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AYEYLAESIRAWP++ LA I+ GWS W+NL+ GIVALH+ KP
Sbjct 181 AYEYLAESIRAWPEREELARAINNNGWSDAGWQNLSLGIVALHSAVKP 228
>gi|341824119|gb|AEK91640.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
pseudotuberculosis PAT10]
Length=232
Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/228 (67%), Positives = 178/228 (79%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
M++A+L+K+P DVA MFDGV + YD+TNTVLS GQDR WR TR L + PG++VLDLAA
Sbjct 1 MAKASLEKNPFDVAKMFDGVGKNYDITNTVLSFGQDRKWREKTRERLNLQPGERVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAW VA DFS GMLAAG R VPKV GD +LPF D+ FDAVTIS+GL
Sbjct 61 GTAVSTVELGKSGAWVVACDFSQGMLAAGKERDVPKVVGDGMQLPFADNSFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV + QAALREMARVT+PGGRL + EFSTP F T YKEYL R LP +A+AV +NPE
Sbjct 121 RNVHDFQAALREMARVTKPGGRLTIAEFSTPNVPGFKTIYKEYLTRLLPLIAKAVGTNPE 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AYEYLAESIRAWP++ LA ++ GWS W+NL+ GIVALH+ KP
Sbjct 181 AYEYLAESIRAWPEREELARVVNNNGWSDAGWQNLSLGIVALHSAVKP 228
>gi|23492317|dbj|BAC17291.1| putative methyltransferase [Corynebacterium efficiens YS-314]
Length=242
Score = 314 bits (804), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 162/230 (71%), Positives = 181/230 (79%), Gaps = 0/230 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
+++A+LDKDP DVASMFD V KYDLTNTVLS GQDR WRR TR L + PG+KVLDLAA
Sbjct 13 VAKASLDKDPFDVASMFDDVGDKYDLTNTVLSFGQDRVWRRRTRERLDLKPGEKVLDLAA 72
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVSTVEL KSGAWCVA DFS GMLAAG R VP V GD LPF D+ FDAVTIS+GL
Sbjct 73 GTAVSTVELAKSGAWCVACDFSQGMLAAGKHRNVPMVVGDGMTLPFADNSFDAVTISYGL 132
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + +A LREMARVT+PGGRL V EFSTP +F T YKEYLMR LP+VAR VSSNPE
Sbjct 133 RNIHDFRAGLREMARVTKPGGRLTVAEFSTPVIPVFGTLYKEYLMRLLPKVARVVSSNPE 192
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGK 230
AY YLAESIRAWPDQ LA +I+ GWS W+NLT GIVA+H+ KPG
Sbjct 193 AYIYLAESIRAWPDQEDLAREINANGWSDCGWQNLTFGIVAMHSAIKPGN 242
>gi|238062208|ref|ZP_04606917.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micromonospora
sp. ATCC 39149]
gi|237884019|gb|EEP72847.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micromonospora
sp. ATCC 39149]
Length=236
Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/223 (70%), Positives = 179/223 (81%), Gaps = 2/223 (0%)
Query 3 RAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAAGT 62
RA+LDK P +VA+MFDGVA +YDLTNTVLS GQDR WRRATR+AL +GPG +VLD+ AGT
Sbjct 9 RASLDKQPHEVAAMFDGVAARYDLTNTVLSFGQDRSWRRATRAALGLGPGDRVLDVGAGT 68
Query 63 AVSTVELTKSGAWCVAADFSVGMLAAGAARK--VPKVAGDATRLPFGDDVFDAVTISFGL 120
VST E+ +SGA+ V AD S+GML+AG + VP +AGDA RLPF D FDAVTISF L
Sbjct 69 GVSTEEMAQSGAYAVGADLSLGMLSAGKRSRPAVPLLAGDALRLPFADASFDAVTISFAL 128
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RNV++ AALRE+ARVTRPGGRL+VCEFSTP N F T Y YLMR+LP VAR VSSNPE
Sbjct 129 RNVSDTNAALRELARVTRPGGRLVVCEFSTPVNPAFRTVYLSYLMRSLPAVARTVSSNPE 188
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALH 223
AY YLAESIRAWPDQ+ LA +I AGW V WRNLTGG+VALH
Sbjct 189 AYVYLAESIRAWPDQSALAARIGAAGWERVAWRNLTGGVVALH 231
>gi|336326469|ref|YP_004606435.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
resistens DSM 45100]
gi|336102451|gb|AEI10271.1| ubiquinone/menaquinone biosynthesis methyltransferase [Corynebacterium
resistens DSM 45100]
Length=229
Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/229 (69%), Positives = 183/229 (80%), Gaps = 0/229 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA+LDK P +VASMFDGV +KYD+TNTVLS GQDR WR+ TR L + PG KVLDLAA
Sbjct 1 MSRASLDKKPHEVASMFDGVGKKYDITNTVLSFGQDRMWRKRTRRRLDLRPGDKVLDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVST EL ++GA+C+A DFS+GML AGA R VPK+ GD T+LPF D FDAVTIS+GL
Sbjct 61 GTAVSTEELAETGAYCIACDFSMGMLRAGAHRDVPKICGDGTQLPFADATFDAVTISYGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + +A LREMARVT+PGG+L V EFSTP +F T YKEYLMRALP VAR VSSNP+
Sbjct 121 RNIVDFRAGLREMARVTKPGGKLAVAEFSTPVIPVFKTIYKEYLMRALPSVARVVSSNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPG 229
AY YLAESIRAWPDQ LA +I + GW V W+NLTGGIVALH+ + G
Sbjct 181 AYIYLAESIRAWPDQEELAREIGQCGWENVGWQNLTGGIVALHSATRRG 229
>gi|291004449|ref|ZP_06562422.1| ubiquinone/menaquinone biosynthesis methyltransferase [Saccharopolyspora
erythraea NRRL 2338]
Length=230
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/228 (68%), Positives = 177/228 (78%), Gaps = 0/228 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
MSRA LDK+PR+VA+MFDGVAR+YDLTNTV+S GQDR WR TR AL+ G+++LDLAA
Sbjct 1 MSRAGLDKNPREVAAMFDGVARRYDLTNTVISFGQDRRWRHVTRDALQPKAGERILDLAA 60
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
G+ VSTVE +SGAWCVAAD SVGML AG R+VP VA DA RLPF D+ FDAVTI FGL
Sbjct 61 GSGVSTVEFGRSGAWCVAADLSVGMLQAGRHREVPMVAADALRLPFADESFDAVTIMFGL 120
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + A LREMARV RPGGRL+VCEFSTPT F + Y Y+MR LP VA AV+SNP+
Sbjct 121 RNLTDTVAGLREMARVVRPGGRLVVCEFSTPTWKPFRSVYMLYVMRILPLVAGAVASNPD 180
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKP 228
AY YLAESIR WPDQ LA +I+ AGW V WR+LT G VA+H KP
Sbjct 181 AYTYLAESIRDWPDQKALAGKIAEAGWGEVAWRDLTNGAVAVHRAVKP 228
>gi|213964999|ref|ZP_03393198.1| menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
amycolatum SK46]
gi|213952535|gb|EEB63918.1| menaquinone biosynthesis methyltransferase UbiE [Corynebacterium
amycolatum SK46]
Length=250
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/230 (66%), Positives = 179/230 (78%), Gaps = 0/230 (0%)
Query 1 MSRAALDKDPRDVASMFDGVARKYDLTNTVLSLGQDRYWRRATRSALRIGPGQKVLDLAA 60
+SRA L K+P +VASMFDGV + YD+TNTVL+ G D YWR T L + PGQKVLDLAA
Sbjct 21 VSRADLTKNPSEVASMFDGVGKNYDITNTVLTGGIDHYWRVRTAKRLNLQPGQKVLDLAA 80
Query 61 GTAVSTVELTKSGAWCVAADFSVGMLAAGAARKVPKVAGDATRLPFGDDVFDAVTISFGL 120
GTAVS+VEL KSGA+ VA DFS GML AGA R VPKV GD +LPF D+ FDAVTISFGL
Sbjct 81 GTAVSSVELAKSGAYVVACDFSRGMLKAGAHRDVPKVCGDGMKLPFPDNTFDAVTISFGL 140
Query 121 RNVANQQAALREMARVTRPGGRLLVCEFSTPTNALFATAYKEYLMRALPRVARAVSSNPE 180
RN+ + +A L E+ARVT+PGG+L VCEFSTP +F+T YKEYLMRALP++A+ VSSNPE
Sbjct 141 RNIVDYKAGLAELARVTKPGGQLTVCEFSTPVVPVFSTFYKEYLMRALPQIAKVVSSNPE 200
Query 181 AYEYLAESIRAWPDQAVLAHQISRAGWSGVRWRNLTGGIVALHAGYKPGK 230
AY YLAESIRAWP+Q+ LA I+ +GW W+NLT GI ALH+ KP +
Sbjct 201 AYVYLAESIRAWPNQSQLARDINASGWEDAGWQNLTFGIAALHSATKPAQ 250
Lambda K H
0.320 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 313223274342
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40