BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0562 Length=335 Score E Sequences producing significant alignments: (Bits) Value gi|15607702|ref|NP_215076.1| polyprenyl-diphosphate synthase [My... 664 0.0 gi|289752601|ref|ZP_06511979.1| polyprenyl-diphosphate synthase ... 662 0.0 gi|289573154|ref|ZP_06453381.1| polyprenyl-diphosphate synthase ... 660 0.0 gi|339297247|gb|AEJ49357.1| polyprenyl-diphosphate synthase [Myc... 650 0.0 gi|118616467|ref|YP_904799.1| polyprenyl diphosphate synthetase,... 523 2e-146 gi|240169241|ref|ZP_04747900.1| polyprenyl diphosphate synthetas... 521 7e-146 gi|41410156|ref|NP_962992.1| GrcC1 [Mycobacterium avium subsp. p... 508 5e-142 gi|254818358|ref|ZP_05223359.1| GrcC1 [Mycobacterium intracellul... 507 1e-141 gi|254777013|ref|ZP_05218529.1| GrcC1 [Mycobacterium avium subsp... 505 4e-141 gi|342858928|ref|ZP_08715582.1| GrcC1 [Mycobacterium colombiense... 505 4e-141 gi|119866839|ref|YP_936791.1| trans-hexaprenyltranstransferase [... 500 1e-139 gi|108797750|ref|YP_637947.1| trans-hexaprenyltranstransferase [... 498 4e-139 gi|118463064|ref|YP_883710.1| polyprenyl synthetase [Mycobacteri... 488 4e-136 gi|15828220|ref|NP_302483.1| polyprenyl diphosphate synthase com... 483 3e-134 gi|296168327|ref|ZP_06850251.1| trans-hexaprenyltranstransferase... 482 3e-134 gi|126433376|ref|YP_001069067.1| trans-hexaprenyltranstransferas... 480 1e-133 gi|333989196|ref|YP_004521810.1| polyprenyl diphosphate syntheta... 478 4e-133 gi|145225827|ref|YP_001136505.1| trans-hexaprenyltranstransferas... 478 8e-133 gi|118469870|ref|YP_885527.1| bifunctional short chain isoprenyl... 476 3e-132 gi|315442465|ref|YP_004075344.1| geranylgeranyl pyrophosphate sy... 467 9e-130 gi|120402007|ref|YP_951836.1| trans-hexaprenyltranstransferase [... 457 1e-126 gi|169631007|ref|YP_001704656.1| polyprenyl-diphosphate synthase... 454 1e-125 gi|312141024|ref|YP_004008360.1| polyprenyl synthetase [Rhodococ... 435 6e-120 gi|331699298|ref|YP_004335537.1| trans-hexaprenyltranstransferas... 403 2e-110 gi|226361079|ref|YP_002778857.1| polyprenyl diphosphate synthase... 402 6e-110 gi|111018984|ref|YP_701956.1| polyprenyl synthetase [Rhodococcus... 401 7e-110 gi|54027096|ref|YP_121338.1| putative polyprenyl diphosphate syn... 394 2e-107 gi|325003710|ref|ZP_08124822.1| trans-hexaprenyltranstransferase... 392 6e-107 gi|333918069|ref|YP_004491650.1| trans-hexaprenyltranstransferas... 390 2e-106 gi|226305198|ref|YP_002765156.1| polyprenyl diphosphate synthase... 390 2e-106 gi|229490670|ref|ZP_04384508.1| bifunctional short chain isopren... 389 3e-106 gi|262201095|ref|YP_003272303.1| trans-hexaprenyltranstransferas... 383 3e-104 gi|343925617|ref|ZP_08765134.1| putative polyprenyl diphosphate ... 375 5e-102 gi|340626001|ref|YP_004744453.1| putative polyprenyl-diphosphate... 375 5e-102 gi|134103316|ref|YP_001108977.1| polyprenyl diphosphate synthase... 362 5e-98 gi|319949942|ref|ZP_08023938.1| polyprenyl synthetase [Dietzia c... 362 5e-98 gi|326383002|ref|ZP_08204691.1| trans-hexaprenyltranstransferase... 362 5e-98 gi|294995177|ref|ZP_06800868.1| polyprenyl-diphosphate synthase ... 360 2e-97 gi|298524483|ref|ZP_07011892.1| conserved hypothetical protein [... 360 2e-97 gi|336460465|gb|EGO39360.1| geranylgeranyl pyrophosphate synthas... 360 2e-97 gi|254231286|ref|ZP_04924613.1| polyprenyl-diphosphate synthase ... 360 2e-97 gi|167968055|ref|ZP_02550332.1| polyprenyl synthetase [Mycobacte... 360 3e-97 gi|308231691|ref|ZP_07413460.2| polyprenyl-diphosphate synthase ... 359 3e-97 gi|31792180|ref|NP_854673.1| polyprenyl-diphosphate synthase [My... 358 7e-97 gi|339631052|ref|YP_004722694.1| polyprenyl-diphosphate synthase... 358 7e-97 gi|15608129|ref|NP_215504.1| polyprenyl-diphosphate synthase [My... 358 9e-97 gi|289744725|ref|ZP_06504103.1| polyprenyl-diphosphate synthase ... 357 1e-96 gi|308370103|ref|ZP_07420299.2| polyprenyl-diphosphate synthase ... 357 1e-96 gi|15840414|ref|NP_335451.1| polyprenyl synthetase [Mycobacteriu... 357 2e-96 gi|289446570|ref|ZP_06436314.1| polyprenyl-diphosphate synthase ... 355 5e-96 >gi|15607702|ref|NP_215076.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv] gi|15839960|ref|NP_334997.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31791744|ref|NP_854237.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97] 75 more sequence titles Length=335 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/335 (99%), Positives = 335/335 (100%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 +RTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR Sbjct 1 MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV Sbjct 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ Sbjct 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG Sbjct 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL Sbjct 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG Sbjct 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 >gi|289752601|ref|ZP_06511979.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis EAS054] gi|289693188|gb|EFD60617.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis EAS054] Length=335 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/335 (99%), Positives = 335/335 (100%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 +RTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR Sbjct 1 MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV Sbjct 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSI+QYLKVVQ Sbjct 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIKQYLKVVQ 180 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG Sbjct 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL Sbjct 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG Sbjct 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 >gi|289573154|ref|ZP_06453381.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis K85] gi|289537585|gb|EFD42163.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis K85] Length=335 Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/335 (99%), Positives = 334/335 (99%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 +RTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR Sbjct 1 MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV Sbjct 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYLLATASRLVARLGPEAVRIIADT AQLVTGQMRETRGTSENVDSIEQYLKVVQ Sbjct 121 AILAGDYLLATASRLVARLGPEAVRIIADTVAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG Sbjct 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL Sbjct 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG Sbjct 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 >gi|339297247|gb|AEJ49357.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis CCDC5180] Length=328 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/328 (99%), Positives = 328/328 (100%), Gaps = 0/328 (0%) Query 8 VAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLS 67 +AGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLS Sbjct 1 MAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLS 60 Query 68 AQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDY 127 AQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDY Sbjct 61 AQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDY 120 Query 128 LLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLI 187 LLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLI Sbjct 121 LLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLI 180 Query 188 GAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGV 247 GAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGV Sbjct 181 GAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGV 240 Query 248 HTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQA 307 HTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQA Sbjct 241 HTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQA 300 Query 308 RHELALLPDVPGRRALAALVDYTVSRHG 335 RHELALLPDVPGRRALAALVDYTVSRHG Sbjct 301 RHELALLPDVPGRRALAALVDYTVSRHG 328 >gi|118616467|ref|YP_904799.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans Agy99] gi|183980932|ref|YP_001849223.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M] gi|118568577|gb|ABL03328.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans Agy99] gi|183174258|gb|ACC39368.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M] Length=335 Score = 523 bits (1347), Expect = 2e-146, Method: Compositional matrix adjust. Identities = 275/335 (83%), Positives = 301/335 (90%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 +RT ATVVAGVD+GDA FA VR GVA +E+LMD ELR ADEVM+DSLLHLF AGGKRFR Sbjct 1 MRTSATVVAGVDVGDAEFATTVRDGVASIERLMDAELRGADEVMTDSLLHLFLAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSAQ+GP P A V +AGAVIEMIHLATLYHDDVMDEAQVRRGAPSANA+WGNNV Sbjct 61 PLFTVLSAQVGPNPGADEVVIAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANARWGNNV 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYLLATASRLV+RLGP+AVRI+ADTFAQLVTGQMRETRG E VD IEQYLKVV Sbjct 121 AILAGDYLLATASRLVSRLGPDAVRIVADTFAQLVTGQMRETRGAPEGVDMIEQYLKVVH 180 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKTG LIGAAGR GGMFSGA EQVERL+RLGG+VGTAFQIADDIIDIDS++++SGKLPG Sbjct 181 EKTGCLIGAAGRFGGMFSGADGEQVERLNRLGGIVGTAFQIADDIIDIDSDTEQSGKLPG 240 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TD+REGV TLPMLYALR++G D ARLR LL GP+ DDAEV EAL LLRASPGM +AK+VL Sbjct 241 TDLREGVRTLPMLYALRQTGSDGARLRTLLAGPIRDDAEVFEALALLRASPGMDQAKEVL 300 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 QYAA+ARHEL LLPDVPGR+ALAALVDYTV+RHG Sbjct 301 GQYAARARHELDLLPDVPGRQALAALVDYTVNRHG 335 >gi|240169241|ref|ZP_04747900.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium kansasii ATCC 12478] Length=335 Score = 521 bits (1341), Expect = 7e-146, Method: Compositional matrix adjust. Identities = 278/335 (83%), Positives = 299/335 (90%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 ++TPATVVAGVD GDA FA VRAGVAR+EQLMDTELR AD VM DSLLHLF AGGKRFR Sbjct 1 MKTPATVVAGVDFGDARFATGVRAGVARIEQLMDTELRSADVVMIDSLLHLFKAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSAQ+GP P+A V +AGAV+E+IHLATLYHDDVMDEA+VRRGAPSANA+WGNNV Sbjct 61 PLFTVLSAQVGPDPEAEEVIIAGAVVELIHLATLYHDDVMDEAEVRRGAPSANARWGNNV 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYLLATASRLV+RLGP AVRI+ADTFA LVTGQMRETRG E D IEQYL VV Sbjct 121 AILAGDYLLATASRLVSRLGPAAVRIVADTFAALVTGQMRETRGAPEGADLIEQYLTVVH 180 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKTGSLIGAAGR G MFSGA +QVERLSRLGG+VGTAFQIADDIIDIDSESDESGK+PG Sbjct 181 EKTGSLIGAAGRFGAMFSGADGDQVERLSRLGGIVGTAFQIADDIIDIDSESDESGKVPG 240 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TD+REGV TLPMLYALR++GPD ARLRALL GP+ DD V EAL LLRASPGMA+AKDVL Sbjct 241 TDLREGVRTLPMLYALRDTGPDGARLRALLAGPIHDDDAVLEALALLRASPGMAKAKDVL 300 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 A+YAAQAR EL LLPDV GRRALAALVDYTVSRHG Sbjct 301 AKYAAQARDELDLLPDVAGRRALAALVDYTVSRHG 335 >gi|41410156|ref|NP_962992.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398989|gb|AAS06608.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10] Length=335 Score = 508 bits (1308), Expect = 5e-142, Method: Compositional matrix adjust. Identities = 263/335 (79%), Positives = 289/335 (87%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 + TPATVVAGVD GD FAA VR GV R+EQLMDTELR AD++M++SL HLF AGGKRFR Sbjct 1 MNTPATVVAGVDFGDPAFAATVRDGVGRIEQLMDTELRSADDIMTESLTHLFKAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSAQIGP PDAA VT+AGAVIE++HLATLYHDDVMDEA+VRRG P+AN +WGNNV Sbjct 61 PLFTVLSAQIGPDPDAAEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNV 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYL ATASRLV+RLGPEAVR+IA+TFAQLVTGQMRETRG + D IE YLKVV Sbjct 121 AILAGDYLFATASRLVSRLGPEAVRLIAETFAQLVTGQMRETRGRKQGSDPIEHYLKVVY 180 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKT LI AAGR G MFSGA +QVERLSRLGG+VGTAFQI+DDIIDIDS+S ESGKLPG Sbjct 181 EKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPG 240 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TDVREGVHTLPM+YALRE GPD ARLR LL GP+DDD V EALTLLRASPGMA+AK L Sbjct 241 TDVREGVHTLPMVYALREPGPDAARLRELLVGPIDDDEVVAEALTLLRASPGMAKAKQSL 300 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 +YAAQA EL LPDVPGRRAL LVD+T+SRHG Sbjct 301 REYAAQAHRELDQLPDVPGRRALQTLVDFTISRHG 335 >gi|254818358|ref|ZP_05223359.1| GrcC1 [Mycobacterium intracellulare ATCC 13950] Length=338 Score = 507 bits (1305), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 266/338 (79%), Positives = 290/338 (86%), Gaps = 3/338 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 + TPATVVAGVDLGDA FAA VR GV R+EQLMDTELR ADE+M++SL HLF AGGKRFR Sbjct 1 MNTPATVVAGVDLGDAAFAATVRDGVGRIEQLMDTELRSADEIMTESLTHLFKAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSAQ+GP PDAA VT+AGAVIE++HLATLYHDDVMDEA+VRRG P+AN +WGNNV Sbjct 61 PLFTVLSAQLGPNPDAADVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNV 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETR---GTSENVDSIEQYLK 177 AILAGDYL ATASRLV+RLGPEAVR+IA+TFAQLVTGQMRETR G +E D IE YLK Sbjct 121 AILAGDYLFATASRLVSRLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGADPIEHYLK 180 Query 178 VVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGK 237 VV EKT LI AAGR G MFSGA +QVERLSRLGG+VGTAFQI+DDIIDIDS+S ESGK Sbjct 181 VVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSRESGK 240 Query 238 LPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAK 297 LPGTDVREGVHTLPM+YALRE GPD ARLR LL GP+DDD V EAL LLRAS GMA+AK Sbjct 241 LPGTDVREGVHTLPMVYALREPGPDAARLRELLVGPIDDDETVAEALALLRASEGMAKAK 300 Query 298 DVLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 L YAAQA ELALLPDVPGR AL LVDYT+SRHG Sbjct 301 RSLQDYAAQAHQELALLPDVPGRHALQTLVDYTISRHG 338 >gi|254777013|ref|ZP_05218529.1| GrcC1 [Mycobacterium avium subsp. avium ATCC 25291] Length=335 Score = 505 bits (1300), Expect = 4e-141, Method: Compositional matrix adjust. Identities = 262/335 (79%), Positives = 288/335 (86%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 + TPATVVAGVD GD FAA VR GV R+EQLMDTELR AD++M++ L HLF AGGKRFR Sbjct 1 MNTPATVVAGVDFGDPAFAATVRDGVGRIEQLMDTELRSADDIMTELLTHLFKAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSAQIGP PDAA VT+AGAVIE++HLATLYHDDVMDEA+VRRG P+AN +WGNNV Sbjct 61 PLFTVLSAQIGPDPDAAEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNV 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYL ATASRLV+RLGPEAV++IA+TFAQLVTGQMRETRG E D IE YLKVV Sbjct 121 AILAGDYLFATASRLVSRLGPEAVQLIAETFAQLVTGQMRETRGRKEGSDPIEHYLKVVY 180 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKT LI AAGR G MFSGA +QVERLSRLGG+VGTAFQI+DDIIDIDS+S ESGKLPG Sbjct 181 EKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPG 240 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TDVREGVHTLPM+YALRE GPD ARLR LL GP+DDD V EALTLLRASPGMA+AK L Sbjct 241 TDVREGVHTLPMVYALREPGPDAARLRELLVGPIDDDEVVAEALTLLRASPGMAKAKQSL 300 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 +YAAQA EL LPDVPGRRAL LVD+T+SRHG Sbjct 301 REYAAQAHRELDQLPDVPGRRALQTLVDFTISRHG 335 >gi|342858928|ref|ZP_08715582.1| GrcC1 [Mycobacterium colombiense CECT 3035] gi|342133169|gb|EGT86372.1| GrcC1 [Mycobacterium colombiense CECT 3035] Length=335 Score = 505 bits (1300), Expect = 4e-141, Method: Compositional matrix adjust. Identities = 261/333 (79%), Positives = 287/333 (87%), Gaps = 0/333 (0%) Query 3 TPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPL 62 TPATVVAGVD GD FAA VR GV R+EQLMDTELR AD++M++SL HLF AGGKRFRPL Sbjct 3 TPATVVAGVDFGDPAFAATVRDGVGRIEQLMDTELRSADDIMTESLTHLFKAGGKRFRPL 62 Query 63 FTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAI 122 FTVLSAQ+GP P++ VT+AGAVIE++HLATLYHDDVMDEA+VRRG P+AN +WGNNVAI Sbjct 63 FTVLSAQLGPNPESVDVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAI 122 Query 123 LAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEK 182 LAGDYL ATASRLV+RLGPEAVR+IA+TFAQLVTGQMRETRG E D IE YLKVV EK Sbjct 123 LAGDYLFATASRLVSRLGPEAVRLIAETFAQLVTGQMRETRGFVEGSDPIEHYLKVVYEK 182 Query 183 TGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTD 242 T LI AAGR G MFSGA +QVERLSRLGG+VGTAFQI+DDIIDIDS+S ESGKLPGTD Sbjct 183 TACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTD 242 Query 243 VREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQ 302 VREGVHTLPM+YALRE GP+ ARLR LL GP+DDD V EAL LLRASPGMA+AK L Sbjct 243 VREGVHTLPMVYALREPGPEAARLRELLVGPIDDDEVVAEALALLRASPGMAKAKRSLQD 302 Query 303 YAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 YAAQA ELALLPDVPGRRAL LVDYT+SRHG Sbjct 303 YAAQAHQELALLPDVPGRRALQTLVDYTISRHG 335 >gi|119866839|ref|YP_936791.1| trans-hexaprenyltranstransferase [Mycobacterium sp. KMS] gi|119692928|gb|ABL90001.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. KMS] Length=342 Score = 500 bits (1287), Expect = 1e-139, Method: Compositional matrix adjust. Identities = 258/335 (78%), Positives = 294/335 (88%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 VRTPATVVAGVD GDA FAA VRAGVAR+E LM TEL +ADE+M++++ HLF AGGKRFR Sbjct 8 VRTPATVVAGVDFGDAAFAADVRAGVARIEDLMSTELGKADELMAEAVQHLFQAGGKRFR 67 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSA++GP+PDA VTVAGAVIE++HLATLYHDDVMDEAQVRRGAPSANA+WGNN+ Sbjct 68 PLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNI 127 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYL ATASRLV+RLGPEAVRIIADTFAQLVTGQMRETRG E VD IE YLKVV Sbjct 128 AILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVTGQMRETRGAVEGVDEIEHYLKVVY 187 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKT LI A+GR G FSGA + Q+ERL+RLGG+VGTAFQI+DDIIDIDS+ DESGK+PG Sbjct 188 EKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQISDDIIDIDSDPDESGKVPG 247 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TD+REGVHTLP+LYALRESGPD RLR LL PVD+D ++ EAL LLR SPGM +AK + Sbjct 248 TDLREGVHTLPVLYALRESGPDTDRLRELLARPVDNDDDLAEALRLLRRSPGMEQAKATV 307 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 A+YA QAR ELA LPD+PGR+ALA+LVDYT++RHG Sbjct 308 ARYAQQARDELAALPDMPGRQALASLVDYTITRHG 342 >gi|108797750|ref|YP_637947.1| trans-hexaprenyltranstransferase [Mycobacterium sp. MCS] gi|108768169|gb|ABG06891.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. MCS] Length=335 Score = 498 bits (1283), Expect = 4e-139, Method: Compositional matrix adjust. Identities = 257/335 (77%), Positives = 294/335 (88%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 +RTPATVVAGVD GDA FAA VRAGVAR+E LM TEL +ADE+M++++ HLF AGGKRFR Sbjct 1 MRTPATVVAGVDFGDAAFAADVRAGVARIEDLMSTELGKADELMAEAVQHLFQAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSA++GP+PDA VTVAGAVIE++HLATLYHDDVMDEAQVRRGAPSANA+WGNN+ Sbjct 61 PLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNI 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYL ATASRLV+RLGPEAVRIIADTFAQLVTGQMRETRG E VD IE YLKVV Sbjct 121 AILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVTGQMRETRGAVEGVDEIEHYLKVVY 180 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKT LI A+GR G FSGA + Q+ERL+RLGG+VGTAFQI+DDIIDIDS+ DESGK+PG Sbjct 181 EKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQISDDIIDIDSDPDESGKVPG 240 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TD+REGVHTLP+LYALRESGPD RLR LL PVD+D ++ EAL LLR SPGM +AK + Sbjct 241 TDLREGVHTLPVLYALRESGPDTDRLRELLARPVDNDDDLAEALRLLRRSPGMEQAKATV 300 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 A+YA QAR ELA LPD+PGR+ALA+LVDYT++RHG Sbjct 301 ARYAQQARDELAALPDMPGRQALASLVDYTITRHG 335 >gi|118463064|ref|YP_883710.1| polyprenyl synthetase [Mycobacterium avium 104] gi|118164351|gb|ABK65248.1| polyprenyl synthetase [Mycobacterium avium 104] Length=325 Score = 488 bits (1257), Expect = 4e-136, Method: Compositional matrix adjust. Identities = 253/325 (78%), Positives = 279/325 (86%), Gaps = 0/325 (0%) Query 11 VDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQI 70 +D GD FAA VR GV R+EQLMDTELR AD++M++ L HLF AGGKRFRPLFTVLSAQI Sbjct 1 MDFGDPAFAATVRDGVGRIEQLMDTELRSADDIMTELLTHLFKAGGKRFRPLFTVLSAQI 60 Query 71 GPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLA 130 GP PDAA VT+AGAVIE++HLATLYHDDVMDEA+VRRG P+AN +WGNNVAILAGDYL A Sbjct 61 GPDPDAAEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGDYLFA 120 Query 131 TASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAA 190 TASRLV+RLGPEAV++IA+TFAQLVTGQMRETRG E D IE YLKVV EKT LI AA Sbjct 121 TASRLVSRLGPEAVQLIAETFAQLVTGQMRETRGRKEGSDPIEHYLKVVYEKTACLIAAA 180 Query 191 GRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTL 250 GR G MFSGA +QVERLSRLGG+VGTAFQI+DDIIDIDS+S ESGKLPGTDVREGVHTL Sbjct 181 GRFGAMFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDVREGVHTL 240 Query 251 PMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHE 310 PM+YALRE GPD ARLR LL GP+DDD V EALTLLRASPGMA+AK L +YAAQA E Sbjct 241 PMVYALREPGPDAARLRELLVGPIDDDEVVAEALTLLRASPGMAKAKQSLREYAAQAHRE 300 Query 311 LALLPDVPGRRALAALVDYTVSRHG 335 L LPDVPGRRAL LVD+T+SRHG Sbjct 301 LDQLPDVPGRRALQTLVDFTISRHG 325 >gi|15828220|ref|NP_302483.1| polyprenyl diphosphate synthase component [Mycobacterium leprae TN] gi|221230697|ref|YP_002504113.1| polyprenyl diphosphate synthase component [Mycobacterium leprae Br4923] gi|13093913|emb|CAC31793.1| polyprenyl diphosphate synthase component [Mycobacterium leprae] gi|219933804|emb|CAR72375.1| polyprenyl diphosphate synthase component [Mycobacterium leprae Br4923] Length=330 Score = 483 bits (1242), Expect = 3e-134, Method: Compositional matrix adjust. Identities = 254/329 (78%), Positives = 284/329 (87%), Gaps = 0/329 (0%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 VVAG++ GDA FAA V+ V R+EQLMD ELR DEVM++S+LHLF AGGKRFRPLFTVL Sbjct 2 VVAGINFGDAAFAATVQDRVVRIEQLMDAELRDTDEVMTESVLHLFAAGGKRFRPLFTVL 61 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 SAQIGP+PDA V +AGAVIE++HLA+LYHDDVMDEA+VRRGAPSAN +W N+VAILAGD Sbjct 62 SAQIGPRPDAPEVIIAGAVIELVHLASLYHDDVMDEAEVRRGAPSANLRWSNSVAILAGD 121 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 YL ATASRLV++LG +AVRIIADTFAQLVTGQMRETRG E DSIEQYLKVV EKTG L Sbjct 122 YLFATASRLVSQLGLDAVRIIADTFAQLVTGQMRETRGVPEGADSIEQYLKVVYEKTGCL 181 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 IG+AGRLGG+F+GA EQVERLSRLG +VGTAFQI+DDIIDIDS+ +SGKLPGTDVREG Sbjct 182 IGSAGRLGGLFAGAHAEQVERLSRLGSIVGTAFQISDDIIDIDSDYTKSGKLPGTDVREG 241 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 V TLP+LYALRE+GPD RLRALL GPVD+DAEV EAL LLRASPGMARA+ VLA YA Q Sbjct 242 VRTLPILYALRETGPDSERLRALLAGPVDNDAEVVEALALLRASPGMARARQVLAHYADQ 301 Query 307 ARHELALLPDVPGRRALAALVDYTVSRHG 335 A ELA LPD P R ALA LVDYT +RHG Sbjct 302 ASGELAQLPDGPSRDALATLVDYTTNRHG 330 >gi|296168327|ref|ZP_06850251.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896758|gb|EFG76391.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=332 Score = 482 bits (1241), Expect = 3e-134, Method: Compositional matrix adjust. Identities = 261/332 (79%), Positives = 282/332 (85%), Gaps = 3/332 (0%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 +VAGVD GD FAA VR GV R+EQLMDTEL ADEVM+DSL HLF AGGKRFRPLFTVL Sbjct 1 MVAGVDFGDPGFAATVRDGVGRIEQLMDTELCSADEVMTDSLTHLFKAGGKRFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 SAQIGP PDA VT+AGAVIE++HLATLYHDDVMDEA+VRRGAP+AN +WGNNVAILAGD Sbjct 61 SAQIGPNPDAHEVTIAGAVIELVHLATLYHDDVMDEAEVRRGAPTANVRWGNNVAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETR---GTSENVDSIEQYLKVVQEKT 183 YL ATASRLV+ LGPEAVR+IA+TFAQLVTGQMRETR G +E D +E YLKVV EKT Sbjct 121 YLFATASRLVSLLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGADPVEHYLKVVYEKT 180 Query 184 GSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDV 243 LI AAGR G MFSGA EQVERLSRLGG+VGTAFQI+DDIIDIDS+S ESGKLPGTD+ Sbjct 181 ACLIAAAGRFGAMFSGADAEQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDI 240 Query 244 REGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQY 303 REGVHTLPMLYALRE GP ARL LL GP DDD V EAL LLRASPGMARAK LA+ Sbjct 241 REGVHTLPMLYALREPGPAAARLAELLAGPTDDDDAVAEALALLRASPGMARAKQTLAEC 300 Query 304 AAQARHELALLPDVPGRRALAALVDYTVSRHG 335 AAQAR ELALLPD+PGRRAL LVDYT+SRHG Sbjct 301 AAQARDELALLPDLPGRRALQTLVDYTISRHG 332 >gi|126433376|ref|YP_001069067.1| trans-hexaprenyltranstransferase [Mycobacterium sp. JLS] gi|126233176|gb|ABN96576.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. JLS] Length=325 Score = 480 bits (1235), Expect = 1e-133, Method: Compositional matrix adjust. Identities = 247/325 (76%), Positives = 284/325 (88%), Gaps = 0/325 (0%) Query 11 VDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQI 70 +D GDA FAA VRAGVAR+E LM TEL +ADE+M++++ HLF AGGKRFRPLFTVLSA++ Sbjct 1 MDFGDAAFAADVRAGVARIEDLMSTELGKADELMAEAVQHLFQAGGKRFRPLFTVLSARL 60 Query 71 GPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLA 130 GP+PDA VTVAGAVIE++HLATLYHDDVMDEAQVRRGAPSANA+WGNN+AILAGDYL A Sbjct 61 GPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGDYLFA 120 Query 131 TASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAA 190 TASRLV+RLGPEAVRIIADTFAQLVTGQMRETRG E VD IE YLKVV EKT LI A+ Sbjct 121 TASRLVSRLGPEAVRIIADTFAQLVTGQMRETRGAVEGVDEIEHYLKVVYEKTACLIAAS 180 Query 191 GRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTL 250 GR G FSGA + Q+ERL+RLGG+VGTAFQI+DDIIDIDS+ DESGK+PGTD+REGVHTL Sbjct 181 GRFGATFSGADETQIERLARLGGIVGTAFQISDDIIDIDSDPDESGKVPGTDLREGVHTL 240 Query 251 PMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHE 310 P+LYALRESGPD RLR LL PVD+D ++ EAL LLR SPGM +AK +A+YA QAR E Sbjct 241 PVLYALRESGPDTDRLRELLARPVDNDDDLAEALRLLRRSPGMEQAKATVARYAQQARDE 300 Query 311 LALLPDVPGRRALAALVDYTVSRHG 335 LA LPD+PGR+ALA+LVDYT++RHG Sbjct 301 LAALPDMPGRQALASLVDYTITRHG 325 >gi|333989196|ref|YP_004521810.1| polyprenyl diphosphate synthetase GrcC1 [Mycobacterium sp. JDM601] gi|333485164|gb|AEF34556.1| polyprenyl diphosphate synthetase GrcC1 [Mycobacterium sp. JDM601] Length=331 Score = 478 bits (1231), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 251/331 (76%), Positives = 284/331 (86%), Gaps = 3/331 (0%) Query 8 VAGVD---LGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFT 64 +AG+D LGD FA +VR GVAR+E+LMDTELR D +M++++ HLF+AGGKRFRPLFT Sbjct 1 MAGLDFGGLGDPAFAGSVRDGVARIEELMDTELRGGDALMTEAVTHLFDAGGKRFRPLFT 60 Query 65 VLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILA 124 VLSAQ+GP+PDA VTVAGAVIE++HLATLYHDDVMDEAQ+RRGAPSANA+WGNN+AILA Sbjct 61 VLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQIRRGAPSANARWGNNIAILA 120 Query 125 GDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTG 184 GDYL ATASRLV+RLGPEAVRIIA+TFAQLVTGQMRETRG E VD+IE YLKVV EKT Sbjct 121 GDYLFATASRLVSRLGPEAVRIIAETFAQLVTGQMRETRGADEGVDAIEHYLKVVYEKTA 180 Query 185 SLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVR 244 LI A+GR G FSGA DEQ+ERL+RLGG+VGTAFQI+DDIIDIDS+ DESGKLPGTD+R Sbjct 181 CLISASGRFGATFSGADDEQIERLARLGGIVGTAFQISDDIIDIDSDPDESGKLPGTDLR 240 Query 245 EGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYA 304 EGVHTLP+LYAL E+GPD RLR LL PV DDA + EAL LLRAS GMARAK +A YA Sbjct 241 EGVHTLPVLYALAETGPDAERLRTLLAEPVTDDAVLAEALGLLRASAGMARAKQTVADYA 300 Query 305 AQARHELALLPDVPGRRALAALVDYTVSRHG 335 AQAR ELA LPD GR ALA LVDYTV+RHG Sbjct 301 AQARAELASLPDCVGRAALAGLVDYTVNRHG 331 >gi|145225827|ref|YP_001136505.1| trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK] gi|145218313|gb|ABP47717.1| Trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK] Length=335 Score = 478 bits (1229), Expect = 8e-133, Method: Compositional matrix adjust. Identities = 246/335 (74%), Positives = 288/335 (86%), Gaps = 0/335 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 +RTPA VVAGVD GDA FA VR GVAR+E LM EL +AD +MS+++ HLF AGGKRFR Sbjct 1 MRTPANVVAGVDFGDAQFAQDVRDGVARIEALMSEELGRADALMSEAVNHLFQAGGKRFR 60 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PLFTVLSAQ+GP+PDA VTVAGAVIE++HLATLYHDDVMDEAQVRRGAPSANA+WGNN+ Sbjct 61 PLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNI 120 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYL ATASRL +RLGPEAVRIIADTFA LVTGQMRETRG ++ VDS++ YLKVV Sbjct 121 AILAGDYLFATASRLTSRLGPEAVRIIADTFALLVTGQMRETRGAADQVDSVDHYLKVVY 180 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPG 240 EKT LI A+GR G FSG+ + Q+ERL++LGG+VGTAFQI+DDIIDIDS++DESGK+PG Sbjct 181 EKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQISDDIIDIDSDADESGKVPG 240 Query 241 TDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVL 300 TD+REGVHTLP+LYALRE+GPD RLR LL GPV DDA+V EAL LLR S G+ +AK+ + Sbjct 241 TDLREGVHTLPVLYALRETGPDADRLRELLAGPVTDDADVAEALRLLRGSQGIRKAKETV 300 Query 301 AQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 YA +A+ EL LPDVPGR+ALA+LVDYTV+RHG Sbjct 301 IGYAQEAQRELDQLPDVPGRQALASLVDYTVNRHG 335 >gi|118469870|ref|YP_885527.1| bifunctional short chain isoprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2 155] gi|118171157|gb|ABK72053.1| bifunctional short chain isoprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2 155] Length=329 Score = 476 bits (1224), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 244/329 (75%), Positives = 285/329 (87%), Gaps = 0/329 (0%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 +VAGVD GD FAA VR GVAR+E LM EL +ADE+M++++ HLF AGGKRFRPLFTVL Sbjct 1 MVAGVDFGDPAFAADVRDGVARIEDLMSDELGKADELMAEAVQHLFQAGGKRFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 SAQ+GP+PDA VTVAGAVIE++HLATLYHDDVMDEAQ+RRGA SANA+WGNN+AILAGD Sbjct 61 SAQLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQMRRGAQSANARWGNNIAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 YL ATASRLV+RLGP+AVR+IADTFAQLVTGQMRETRG +++VDS++ YLKVV EKT L Sbjct 121 YLFATASRLVSRLGPDAVRVIADTFAQLVTGQMRETRGAADHVDSVDHYLKVVYEKTACL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+GR G FSGA DEQ+ERLSRLGG+VGTAFQIADDIIDIDS+ DESGK PGTD+REG Sbjct 181 IAASGRFGATFSGANDEQIERLSRLGGIVGTAFQIADDIIDIDSDPDESGKTPGTDLREG 240 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLP+LYALRE+GPD RLR LL GP++ D +V EAL LLR SPG+ +AK+ +A YAAQ Sbjct 241 VHTLPVLYALRETGPDADRLRELLAGPIERDEDVAEALALLRRSPGLTKAKETVASYAAQ 300 Query 307 ARHELALLPDVPGRRALAALVDYTVSRHG 335 AR EL+ LP+ PGR+ALA LVDYT+SR G Sbjct 301 AREELSHLPECPGRQALAVLVDYTISREG 329 >gi|315442465|ref|YP_004075344.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] gi|315260768|gb|ADT97509.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] Length=329 Score = 467 bits (1202), Expect = 9e-130, Method: Compositional matrix adjust. Identities = 241/329 (74%), Positives = 283/329 (87%), Gaps = 0/329 (0%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 +VAGVD GDA FA VR GVAR+E LM EL +AD +MS+++ HLF AGGKRFRPLFTVL Sbjct 1 MVAGVDFGDAQFAQDVRDGVARIEALMSEELGRADALMSEAVNHLFQAGGKRFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 SAQ+GP+PDA VTVAGAVIE++HLATLYHDDVMDEAQVRRGAPSANA+WGNN+AILAGD Sbjct 61 SAQLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 YL ATASRL +RLGPEAVRIIADTFA LVTGQMRETRG ++ VDS++ YLKVV EKT L Sbjct 121 YLFATASRLTSRLGPEAVRIIADTFALLVTGQMRETRGAADQVDSVDHYLKVVYEKTACL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+GR G FSG+ + Q+ERL++LGG+VGTAFQI+DDIIDIDS++DESGK+PGTD+REG Sbjct 181 ISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQISDDIIDIDSDADESGKVPGTDLREG 240 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLP+LYALRE+GPD RLR LL GPV DDA+V EAL LLR S G+ +AK+ + YA + Sbjct 241 VHTLPVLYALRETGPDADRLRELLAGPVTDDADVAEALRLLRGSQGIRKAKETVIGYAQE 300 Query 307 ARHELALLPDVPGRRALAALVDYTVSRHG 335 A+ EL LPDVPGR+ALA+LVDYTV+RHG Sbjct 301 AQRELDQLPDVPGRQALASLVDYTVNRHG 329 >gi|120402007|ref|YP_951836.1| trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1] gi|119954825|gb|ABM11830.1| Trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1] Length=329 Score = 457 bits (1176), Expect = 1e-126, Method: Compositional matrix adjust. Identities = 237/329 (73%), Positives = 278/329 (85%), Gaps = 0/329 (0%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 +VAGVD GDA FA VR GVAR+E LM EL +AD +M++++ HLF AGGKRFRPLFTVL Sbjct 1 MVAGVDFGDAEFAQDVRDGVARIEALMSEELGKADVLMAEAVQHLFQAGGKRFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 SAQ+GP+PDA VTVAGAVIE++HLATLYHDDVMDEAQVRRGAPSANA+W NN+AILAGD Sbjct 61 SAQLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWSNNIAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 YL ATASRLV+RLGP+AVRIIADTFA LVTGQMRETRG +++VD ++ YLKVV EKT L Sbjct 121 YLFATASRLVSRLGPDAVRIIADTFALLVTGQMRETRGAADHVDEVDHYLKVVYEKTACL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+GR G FSGA DEQ+ERL+RLGG+VGTAFQI+DDIIDIDS+ DESGK+PGTD+REG Sbjct 181 IAASGRFGATFSGADDEQIERLARLGGIVGTAFQISDDIIDIDSDPDESGKVPGTDLREG 240 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLP+LYALRE+GPD RLR LL PV DD ++ EAL LLRAS G+ +AK+ +A YA + Sbjct 241 VHTLPVLYALRETGPDADRLRELLATPVTDDGDLAEALRLLRASDGITKAKETVAAYARE 300 Query 307 ARHELALLPDVPGRRALAALVDYTVSRHG 335 A EL LP PGR+ALA LV YT++RHG Sbjct 301 AEQELGQLPAGPGRQALATLVQYTINRHG 329 >gi|169631007|ref|YP_001704656.1| polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus ATCC 19977] gi|169242974|emb|CAM64002.1| Probable polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus] Length=328 Score = 454 bits (1168), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 228/328 (70%), Positives = 266/328 (82%), Gaps = 0/328 (0%) Query 8 VAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLS 67 +AGVDLGD VFAA VR +A +E L+ +EL Q+D ++++S+LHLF+AGGKRFRPLFTVL+ Sbjct 1 MAGVDLGDPVFAAKVRDHLAAIETLIVSELGQSDPLLTESVLHLFHAGGKRFRPLFTVLA 60 Query 68 AQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDY 127 AQ GP PD V +AGAV E+IHLATLYHDDVMDEAQ RRG PSANA+WGNNVAILAGDY Sbjct 61 AQTGPDPDNDEVILAGAVCELIHLATLYHDDVMDEAQKRRGVPSANARWGNNVAILAGDY 120 Query 128 LLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLI 187 LLATASRLV+RLGP AVRI+A+TFA+LVTGQMRET G E D E YLKV+ EKTGSLI Sbjct 121 LLATASRLVSRLGPTAVRIVAETFAELVTGQMRETVGVPEGGDETEHYLKVIHEKTGSLI 180 Query 188 GAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGV 247 AAGR G M S D+Q+ERLSRLG +VGTAFQI+DDIIDI+S +DESGK PGTD+REGV Sbjct 181 AAAGRFGAMTSRCDDDQIERLSRLGAIVGTAFQISDDIIDIESLTDESGKTPGTDLREGV 240 Query 248 HTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQA 307 HTLPMLYALR++GPD RLR LL P+ DDAEV EAL LLRAS G+A+AK V+ YA +A Sbjct 241 HTLPMLYALRDTGPDADRLRVLLAAPITDDAEVEEALALLRASEGLAQAKSVVIDYADRA 300 Query 308 RHELALLPDVPGRRALAALVDYTVSRHG 335 + EL LP R AL L++YTV RHG Sbjct 301 KAELVELPPGDARDALGVLIEYTVRRHG 328 >gi|312141024|ref|YP_004008360.1| polyprenyl synthetase [Rhodococcus equi 103S] gi|325675339|ref|ZP_08155023.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707] gi|311890363|emb|CBH49681.1| polyprenyl synthetase [Rhodococcus equi 103S] gi|325553310|gb|EGD22988.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707] Length=342 Score = 435 bits (1118), Expect = 6e-120, Method: Compositional matrix adjust. Identities = 223/331 (68%), Positives = 260/331 (79%), Gaps = 0/331 (0%) Query 5 ATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFT 64 +TVVAGVDLGD A AVR G+ARVE+L+ +EL ++ ++++ LHL AGGKRFRPLFT Sbjct 12 STVVAGVDLGDQQLADAVRDGLARVEELLVSELSDGEDFLTEAALHLAKAGGKRFRPLFT 71 Query 65 VLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILA 124 VL+AQ+GP+ AV A V+E++HLATLYHDDVMDEA +RRGAPSANA+WGN++AILA Sbjct 72 VLTAQLGPEGSDPAVVTAATVVELVHLATLYHDDVMDEAAMRRGAPSANARWGNSIAILA 131 Query 125 GDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTG 184 GDYL A ASRLV+ LGPEAVRIIA+TFA+LVTGQMRET G E D +E YLKVV EKTG Sbjct 132 GDYLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIGAREKQDPVEHYLKVVWEKTG 191 Query 185 SLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVR 244 SLI A+GR GG FSGA +Q+ RL RLG VGTAFQIADDIIDI S S++SGK PGTD+R Sbjct 192 SLIAASGRFGGTFSGADADQIARLERLGDAVGTAFQIADDIIDISSASEQSGKTPGTDLR 251 Query 245 EGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYA 304 EGVHTLP+LYALRE G D RLR LL+GPV +DA+V EAL LL SPGMA AK L +YA Sbjct 252 EGVHTLPVLYALREEGADADRLRVLLDGPVTEDADVAEALALLERSPGMAAAKAKLGEYA 311 Query 305 AQARHELALLPDVPGRRALAALVDYTVSRHG 335 +AR ELA LP P AL LVDYTV R G Sbjct 312 DRARAELAQLPQGPANDALVRLVDYTVERVG 342 >gi|331699298|ref|YP_004335537.1| trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans CB1190] gi|326953987|gb|AEA27684.1| Trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans CB1190] Length=331 Score = 403 bits (1035), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 203/329 (62%), Positives = 246/329 (75%), Gaps = 2/329 (0%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 +VAGV++GD V AA G+ RVE L+ E++ ++++ LHL +AGGKRFRPLFT+L Sbjct 5 IVAGVEVGDPVLAAVTTDGLKRVEDLLHREVQADYHFVAETSLHLIDAGGKRFRPLFTLL 64 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 SAQ+GP PD V A AV+E++HLATLYHDDVMD A +RRGA SAN++W N VAIL GD Sbjct 65 SAQVGPNPDNDDVITAAAVVELVHLATLYHDDVMDSATMRRGAESANSRWDNTVAILTGD 124 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 +L A ASRLVA LGP+AVRIIA+TFA+LVTGQMRETRG +E D +E YL+VV EKTGSL Sbjct 125 FLFAHASRLVADLGPDAVRIIAETFAELVTGQMRETRGPAEGDDPVEHYLRVVAEKTGSL 184 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I +GR GGMFSG T EQ E L R G +GTAFQI+DD+IDI S SD+SGK PGTD+REG Sbjct 185 IATSGRYGGMFSGCTPEQTESLRRFGATIGTAFQISDDVIDIASPSDDSGKTPGTDLREG 244 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 V TLPMLYAL+E P RLR LL P+ DDAEV EAL LLR PG+ R+++ LA+YA Sbjct 245 VQTLPMLYALQE--PRADRLRQLLARPISDDAEVEEALDLLRTGPGLDRSRETLARYAEA 302 Query 307 ARHELALLPDVPGRRALAALVDYTVSRHG 335 +R +LA+LPD ALA L Y V R G Sbjct 303 SREQLAILPDCAATSALATLTAYVVERTG 331 >gi|226361079|ref|YP_002778857.1| polyprenyl diphosphate synthase [Rhodococcus opacus B4] gi|226239564|dbj|BAH49912.1| putative polyprenyl diphosphate synthase [Rhodococcus opacus B4] Length=351 Score = 402 bits (1032), Expect = 6e-110, Method: Compositional matrix adjust. Identities = 213/330 (65%), Positives = 254/330 (77%), Gaps = 0/330 (0%) Query 6 TVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTV 65 T VAG+DLGD AA VR G+ +VE+L+ +EL ++ ++++ LHL AGGKRFRPLFTV Sbjct 22 TTVAGIDLGDPQLAATVREGLKQVEELLVSELSDGEDFLTEAALHLAKAGGKRFRPLFTV 81 Query 66 LSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAG 125 L+AQ+GP+ +V A V+E++HLATLYHDDVMDEA +RRGAPSANA+WGN+VAILAG Sbjct 82 LTAQLGPKASDPSVVTAATVVELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILAG 141 Query 126 DYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGS 185 DYL A ASRLV+ LGPEAVRIIA+TFA+LVTGQMRET G D +E YLKVV EKTGS Sbjct 142 DYLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIGLRGEQDPVEHYLKVVWEKTGS 201 Query 186 LIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVRE 245 LI A+GR GG FSGA + V+RL RLG VGTAFQI+DDIIDI S S +SGK PGTD+RE Sbjct 202 LIAASGRFGGTFSGADADHVKRLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLRE 261 Query 246 GVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAA 305 GVHTLP+LYALR+ GP+ RLR LL+GPV DD +V EAL LL SPGMA AK L ++A Sbjct 262 GVHTLPVLYALRDEGPEADRLRVLLDGPVTDDGDVAEALALLERSPGMAAAKAKLEEFAV 321 Query 306 QARHELALLPDVPGRRALAALVDYTVSRHG 335 AR +LA LP P AL LVDYT+ R G Sbjct 322 SARAQLAELPQGPANDALVKLVDYTIERVG 351 >gi|111018984|ref|YP_701956.1| polyprenyl synthetase [Rhodococcus jostii RHA1] gi|110818514|gb|ABG93798.1| polyprenyl synthetase [Rhodococcus jostii RHA1] Length=346 Score = 401 bits (1031), Expect = 7e-110, Method: Compositional matrix adjust. Identities = 213/330 (65%), Positives = 254/330 (77%), Gaps = 0/330 (0%) Query 6 TVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTV 65 T VAG+DLGD AA VR G+ +VE+L+ +EL ++ ++++ LHL AGGKRFRPLFTV Sbjct 17 TTVAGIDLGDPQLAATVREGLKQVEELLVSELSDGEDFLTEAALHLAKAGGKRFRPLFTV 76 Query 66 LSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAG 125 L+AQ+GP+ +V A V+E++HLATLYHDDVMDEA +RRGAPSAN++WGN+VAILAG Sbjct 77 LTAQLGPKASDPSVVTAATVVELVHLATLYHDDVMDEASMRRGAPSANSRWGNSVAILAG 136 Query 126 DYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGS 185 DYL A ASRLV+ LGPEAVRIIA+TFA+LVTGQMRET G D +E YLKVV EKTGS Sbjct 137 DYLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIGLRGEQDPVEHYLKVVWEKTGS 196 Query 186 LIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVRE 245 LI A GR GG FSGA + V+RL RLG VGTAFQI+DDIIDI S S +SGK PGTD+RE Sbjct 197 LIAACGRFGGTFSGADADHVKRLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLRE 256 Query 246 GVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAA 305 GVHTLP+LYALR+ GPD RLR LL+GPV +D +V EAL LL SPGMA AK L ++A Sbjct 257 GVHTLPVLYALRDEGPDADRLRVLLDGPVTNDDDVAEALALLERSPGMAAAKAKLEEFAV 316 Query 306 QARHELALLPDVPGRRALAALVDYTVSRHG 335 QAR +LA LP P AL LVDYT+ R G Sbjct 317 QARAQLAELPQGPANDALVKLVDYTIERVG 346 >gi|54027096|ref|YP_121338.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM 10152] gi|54018604|dbj|BAD59974.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM 10152] Length=345 Score = 394 bits (1011), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 210/330 (64%), Positives = 249/330 (76%), Gaps = 0/330 (0%) Query 6 TVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTV 65 TVVAGV+LGDA AA VR G+ VE+L+ EL ++ + D+ LHL AGGKRFRPLFT+ Sbjct 16 TVVAGVELGDAELAATVRNGLEEVEKLLIAELSDGEDFLQDAALHLAKAGGKRFRPLFTI 75 Query 66 LSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAG 125 L+ Q+GP+P A+ AG V+E++HLATLYHDDVMDEA +RRGAPS N++WGNN+AILAG Sbjct 76 LTGQLGPRPTDPALITAGTVVELVHLATLYHDDVMDEATMRRGAPSVNSRWGNNIAILAG 135 Query 126 DYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGS 185 DYL A ASRL + LGP+AVRIIA+TFA+LVTGQMRET G E+ D +E YL+VV EKTGS Sbjct 136 DYLFAHASRLTSTLGPDAVRIIAETFAELVTGQMRETMGARESQDPVEHYLRVVWEKTGS 195 Query 186 LIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVRE 245 LI AAGR GG FSGA +ERL+RLG VGTAFQI+DDIIDI S S++SGK PGTD+RE Sbjct 196 LIAAAGRFGGTFSGADTAHIERLARLGDAVGTAFQISDDIIDISSASEQSGKTPGTDLRE 255 Query 246 GVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAA 305 GVHTLP+LYALRE G + RLR LL+ P+ D EV EAL LL S GM AK+ L YA Sbjct 256 GVHTLPVLYALREEGAEADRLRTLLDHPLHSDDEVAEALELLGRSQGMVLAKEKLQSYAD 315 Query 306 QARHELALLPDVPGRRALAALVDYTVSRHG 335 QA ELA LP P AL LV YT+ R G Sbjct 316 QAYAELAALPSGPANDALEQLVRYTIERVG 345 >gi|325003710|ref|ZP_08124822.1| trans-hexaprenyltranstransferase [Pseudonocardia sp. P1] Length=330 Score = 392 bits (1006), Expect = 6e-107, Method: Compositional matrix adjust. Identities = 201/330 (61%), Positives = 243/330 (74%), Gaps = 2/330 (0%) Query 8 VAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLS 67 +AGV + D A A G+ RVE L+ E+ E ++++ LHL AGGKRFRPLFT+L+ Sbjct 1 MAGVRMADPALAEATADGLKRVEDLLHREVHSDYEFVTETSLHLIEAGGKRFRPLFTLLA 60 Query 68 AQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDY 127 AQ+GP P+ V A AV+E+IHLATLYHDDVMDEA +RRGA SAN++W N++AIL GD+ Sbjct 61 AQVGPHPERDGVITAAAVVELIHLATLYHDDVMDEAAMRRGAESANSRWDNSIAILTGDF 120 Query 128 LLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLI 187 L A ASRLVA LGP+AVRIIA+TFAQLVTGQMRETRG + D +E YL+VV EKTGSLI Sbjct 121 LFAHASRLVADLGPDAVRIIAETFAQLVTGQMRETRGPKPSDDPVEHYLRVVGEKTGSLI 180 Query 188 GAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGV 247 +GR GGMFSGA E +E L R G V+GTAFQI+DDIIDI S +D+SGK PGTD+REGV Sbjct 181 ATSGRYGGMFSGAPTEHIEALHRFGDVIGTAFQISDDIIDIASPADDSGKTPGTDLREGV 240 Query 248 HTLPMLYALR--ESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAA 305 HTLPMLYALR + P RLR LL P+ DD EV EAL LLR+ + RA++ +A YA Sbjct 241 HTLPMLYALRDGDDSPSARRLRELLAAPITDDDEVAEALDLLRSGDALVRARETVAGYAD 300 Query 306 QARHELALLPDVPGRRALAALVDYTVSRHG 335 +AR ELA+LP P AL L DYTV R G Sbjct 301 RARAELAVLPACPAIDALRTLTDYTVERTG 330 >gi|333918069|ref|YP_004491650.1| trans-hexaprenyltranstransferase [Amycolicicoccus subflavus DQS3-9A1] gi|333480290|gb|AEF38850.1| Trans-hexaprenyltranstransferase [Amycolicicoccus subflavus DQS3-9A1] Length=346 Score = 390 bits (1002), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 193/330 (59%), Positives = 247/330 (75%), Gaps = 0/330 (0%) Query 6 TVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTV 65 + VAG+D+GD A+ V+A ++ VE L+ EL +E ++++ L+L AGGKRFRPLFTV Sbjct 17 STVAGIDIGDPEMASRVQASLSEVEALLIEELSAGEEFLTETALYLAKAGGKRFRPLFTV 76 Query 66 LSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAG 125 L ++GP+P+++++ A AV+EM+HLATLYHDDVMDEA +RRGA SAN +W N+VAILAG Sbjct 77 LCGKLGPEPESSSIVTAAAVVEMVHLATLYHDDVMDEATMRRGAVSANERWSNSVAILAG 136 Query 126 DYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGS 185 DYL A ASRL++ LGPEAVR+IA+TFA+LVTGQMRET G + D + YL V++EKT S Sbjct 137 DYLFAHASRLLSTLGPEAVRVIAETFAELVTGQMRETIGAKSSEDPVAHYLTVIREKTAS 196 Query 186 LIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVRE 245 LI A G+ GG FSGA QV+RL RLG VG AFQI DDIIDI S S++SGK PGTD+RE Sbjct 197 LIAACGKFGGTFSGADAAQVDRLDRLGDAVGMAFQICDDIIDISSVSEKSGKTPGTDLRE 256 Query 246 GVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAA 305 GV TLPMLYAL+++GP RL LL+GP+ D EV EAL LLR S G+ RA+ L YA Sbjct 257 GVRTLPMLYALQDTGPAAERLHELLSGPITSDPEVDEALGLLRQSEGLRRARATLHGYAE 316 Query 306 QARHELALLPDVPGRRALAALVDYTVSRHG 335 +AR EL +LP P AL L++YT++R G Sbjct 317 RARAELRVLPQGPANEALNRLIEYTIARVG 346 >gi|226305198|ref|YP_002765156.1| polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4] gi|226184313|dbj|BAH32417.1| putative polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4] Length=349 Score = 390 bits (1001), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 212/331 (65%), Positives = 253/331 (77%), Gaps = 0/331 (0%) Query 5 ATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFT 64 +TVVAG+DLGD AA VR G++ VE+L+ +EL ++ ++++ LHL AGGKRFRPLFT Sbjct 19 STVVAGIDLGDEQLAAVVRGGLSDVEELLVSELSDGEDFLTEAALHLARAGGKRFRPLFT 78 Query 65 VLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILA 124 +L+AQ+GP P+ ++ A V E++HLATLYHDDVMDEA +RRGAPSANA+WGN+VAILA Sbjct 79 ILTAQLGPVPNDPSIITAATVTELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILA 138 Query 125 GDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTG 184 GDYL A ASRLV+ LGPEAVRIIA+TFA+LVTGQMRET G + D +E YLKVV EKTG Sbjct 139 GDYLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIGVKKEQDPVEHYLKVVWEKTG 198 Query 185 SLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVR 244 SLI A+GR GG FSGA +ERL RLG VGTAFQI+DDIIDI S S +SGK PGTD+R Sbjct 199 SLIAASGRFGGTFSGADAAHIERLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLR 258 Query 245 EGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYA 304 EGVHTLP+LYA RE G D RLR LL GPV +DA V EAL LL SPGM +AK L +YA Sbjct 259 EGVHTLPVLYAFREEGADADRLRELLAGPVTEDALVEEALELLERSPGMVKAKAKLGEYA 318 Query 305 AQARHELALLPDVPGRRALAALVDYTVSRHG 335 A+ +LA LP P AL LVDYT+ R G Sbjct 319 VSAKAQLAELPQGPANEALVRLVDYTIERVG 349 >gi|229490670|ref|ZP_04384508.1| bifunctional short chain isoprenyl diphosphate synthase [Rhodococcus erythropolis SK121] gi|229322490|gb|EEN88273.1| bifunctional short chain isoprenyl diphosphate synthase [Rhodococcus erythropolis SK121] Length=359 Score = 389 bits (1000), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 212/331 (65%), Positives = 253/331 (77%), Gaps = 0/331 (0%) Query 5 ATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFT 64 +TVVAG+DLGD AA VR G++ VE+L+ +EL ++ ++++ LHL AGGKRFRPLFT Sbjct 29 STVVAGIDLGDEQLAAVVRGGLSDVEELLVSELSDGEDFLTEAALHLARAGGKRFRPLFT 88 Query 65 VLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILA 124 +L+AQ+GP P+ ++ A V E++HLATLYHDDVMDEA +RRGAPSANA+WGN+VAILA Sbjct 89 ILTAQLGPVPNDPSIITAATVTELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILA 148 Query 125 GDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTG 184 GDYL A ASRLV+ LGPEAVRIIA+TFA+LVTGQMRET G + D +E YLKVV EKTG Sbjct 149 GDYLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIGVKKEQDPVEHYLKVVWEKTG 208 Query 185 SLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVR 244 SLI A+GR GG FSGA +ERL RLG VGTAFQI+DDIIDI S S +SGK PGTD+R Sbjct 209 SLIAASGRFGGTFSGADAAHIERLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLR 268 Query 245 EGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYA 304 EGVHTLP+LYA RE G D RLR LL GPV +DA V EAL LL SPGM +AK L +YA Sbjct 269 EGVHTLPVLYAFREEGADADRLRELLAGPVTEDALVEEALELLERSPGMVKAKAKLGEYA 328 Query 305 AQARHELALLPDVPGRRALAALVDYTVSRHG 335 A+ +LA LP P AL LVDYT+ R G Sbjct 329 VAAKAQLAELPQGPANEALVRLVDYTIERVG 359 >gi|262201095|ref|YP_003272303.1| trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247] gi|262084442|gb|ACY20410.1| Trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247] Length=338 Score = 383 bits (983), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 203/336 (61%), Positives = 244/336 (73%), Gaps = 6/336 (1%) Query 6 TVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTV 65 + AGVDL FA VR+ + RVE L+ EL D+VM+++ HL AGGKRFRP+F V Sbjct 3 STFAGVDLVSDEFAETVRSSLQRVEDLLLAELSSGDDVMTEAATHLAKAGGKRFRPMFAV 62 Query 66 LSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAG 125 L+AQ G +PDA V + V+EMIHLATLYHDDVMDEA +RRGAPSANA+W N+VAIL+G Sbjct 63 LAAQFGERPDADEVITSATVVEMIHLATLYHDDVMDEAPLRRGAPSANARWSNSVAILSG 122 Query 126 DYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGS 185 D+L A ASRLV+ LGP+AVRIIA+TFA+LVTGQMRET G D IE YL+VV EKTGS Sbjct 123 DFLFARASRLVSTLGPDAVRIIAETFAELVTGQMRETVGVKAGGDPIEHYLRVVWEKTGS 182 Query 186 LIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVRE 245 LI AAGR G M SGAT + VERLSR+G VVGTAFQ++DDIIDI S + +SGK PGTD+RE Sbjct 183 LIAAAGRFGAMASGATPDDVERLSRIGDVVGTAFQVSDDIIDISSVTGDSGKTPGTDLRE 242 Query 246 GVHTLPMLYALRESGPDCARLRALLNG------PVDDDAEVREALTLLRASPGMARAKDV 299 GVHTLP+LYALR RLR LL P+ DD EV EA+ LL +S GM++A Sbjct 243 GVHTLPVLYALRSDDASSQRLRQLLVAADGTARPLTDDDEVAEAIELLGSSSGMSQAHAR 302 Query 300 LAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 L +A +A ELA L D P +AL++LV YTV R G Sbjct 303 LQSFADEADAELAQLADGPAHQALSSLVRYTVDRMG 338 >gi|343925617|ref|ZP_08765134.1| putative polyprenyl diphosphate synthase [Gordonia alkanivorans NBRC 16433] gi|343764407|dbj|GAA12060.1| putative polyprenyl diphosphate synthase [Gordonia alkanivorans NBRC 16433] Length=338 Score = 375 bits (963), Expect = 5e-102, Method: Compositional matrix adjust. Identities = 198/336 (59%), Positives = 247/336 (74%), Gaps = 6/336 (1%) Query 6 TVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTV 65 ++ AG+DL FA VR+ + +VE L+ EL DEVM+++ HL AGGKRFRP+F + Sbjct 3 SIFAGLDLVSDEFAETVRSSLQKVEDLLLGELSSGDEVMTEAATHLAKAGGKRFRPMFAI 62 Query 66 LSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAG 125 L++Q GP+PD+ V + V+EMIHLATLYHDDVMDEA +RRGAPSANA+W N++AIL+G Sbjct 63 LASQFGPRPDSEDVITSATVVEMIHLATLYHDDVMDEASMRRGAPSANARWTNSIAILSG 122 Query 126 DYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGS 185 D+L A ASRLV+ LGPEAVRIIA+TFA+LVTGQMRET G D I+ YL+VV EKTGS Sbjct 123 DFLFARASRLVSTLGPEAVRIIAETFAELVTGQMRETVGVKPGADPIDHYLQVVWEKTGS 182 Query 186 LIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVRE 245 LI AA R G M SGAT + +ERLS++G +VG AFQ++DDIIDI S S +SGK PGTD+RE Sbjct 183 LIAAAARFGAMASGATTDDIERLSKIGDIVGVAFQVSDDIIDISSVSVDSGKTPGTDLRE 242 Query 246 GVHTLPMLYALRESGPDCARLRALLNG------PVDDDAEVREALTLLRASPGMARAKDV 299 GVHTLP+LYAL ARLR LL G P+ DDAEV EAL LL +S GMA A+ Sbjct 243 GVHTLPVLYALTGDDATSARLRELLVGPDGGSRPLTDDAEVAEALRLLESSAGMAAARAK 302 Query 300 LAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 L +A +A LA LP+ P +AL++LVDYT+ R G Sbjct 303 LQSFADEAHAMLAELPETPAHKALSSLVDYTIDRVG 338 >gi|340626001|ref|YP_004744453.1| putative polyprenyl-diphosphate synthase GRCC2 [Mycobacterium canettii CIPT 140010059] gi|340004191|emb|CCC43331.1| putative polyprenyl-diphosphate synthase GRCC2 (polyprenyl pyrophosphate synthetase) [Mycobacterium canettii CIPT 140010059] Length=325 Score = 375 bits (963), Expect = 5e-102, Method: Compositional matrix adjust. Identities = 190/326 (59%), Positives = 241/326 (74%), Gaps = 4/326 (1%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 ++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPLFTVL Sbjct 1 MIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 +AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AILAGD Sbjct 61 AAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 Y ATAS+L +RL PEA +IA+ FA+L+TGQMR TRG + ++D+IE YL+VV EKTGSL Sbjct 121 YRFATASQLASRLDPEAFAVIAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D+ + Sbjct 181 IAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGADLGQA 237 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A YAAQ Sbjct 238 VHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAAYAAQ 296 Query 307 ARHELALLPDVPGRRALAALVDYTVS 332 AR EL LPD RRALA L+D+ VS Sbjct 297 AREELPYLPDRQPRRALATLIDHAVS 322 >gi|134103316|ref|YP_001108977.1| polyprenyl diphosphate synthase component [Saccharopolyspora erythraea NRRL 2338] gi|291004465|ref|ZP_06562438.1| polyprenyl diphosphate synthase component [Saccharopolyspora erythraea NRRL 2338] gi|133915939|emb|CAM06052.1| polyprenyl diphosphate synthase component [Saccharopolyspora erythraea NRRL 2338] Length=344 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 191/324 (59%), Positives = 236/324 (73%), Gaps = 2/324 (0%) Query 10 GVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQ 69 G ++ D+ A +VR G+A VE L+ +R E + + LHL +AGGKRFRPLF +L+AQ Sbjct 21 GFEITDSALAESVRQGIADVEALLHESVRSDLEFATRTSLHLVDAGGKRFRPLFALLAAQ 80 Query 70 IGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLL 129 G P V + AV+EM+HLATLYHDDVMDEA +RRGA SANA+W N+VAIL GD+L Sbjct 81 FG-DPRTENVIKSAAVVEMVHLATLYHDDVMDEATMRRGATSANARWDNSVAILTGDFLF 139 Query 130 ATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGA 189 A ASRLVA LG +A R +A TF LVTGQMRET G + D ++ YLKV+ EKTGSLI Sbjct 140 AQASRLVADLGTDAAREMARTFEALVTGQMRETVGVGRDEDPVDFYLKVIYEKTGSLIAI 199 Query 190 AGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHT 249 AGR G +FSGA+ EQV + RLG ++GTAFQI+DD+IDI S + ESGK PGTD+REGV T Sbjct 200 AGRFGALFSGASPEQVTAMERLGRILGTAFQISDDVIDIASPAVESGKTPGTDLREGVRT 259 Query 250 LPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARH 309 LPML+AL + G D RLR LL GP++ DA+V EAL LLR G+ RA+ L +YAA+AR Sbjct 260 LPMLFALADEGTDV-RLRELLAGPLEHDADVEEALKLLRECDGLTRARRTLDEYAAEART 318 Query 310 ELALLPDVPGRRALAALVDYTVSR 333 ELA LPDVP R ALA LV+Y V+R Sbjct 319 ELAALPDVPARDALATLVEYVVAR 342 >gi|319949942|ref|ZP_08023938.1| polyprenyl synthetase [Dietzia cinnamea P4] gi|319436392|gb|EFV91516.1| polyprenyl synthetase [Dietzia cinnamea P4] Length=344 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 193/332 (59%), Positives = 234/332 (71%), Gaps = 3/332 (0%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 VVAGVD+GDA AAA+R + VE+L+ + L ++ +S+ LHL AGGKRFRP+ T+L Sbjct 13 VVAGVDVGDADLAAALRGRLDEVEKLLVSRLESGEDFLSEVALHLVTAGGKRFRPIVTLL 72 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 + +IGP+PD + A V EMIHLATLYHDDVMDEA +RRG SAN++W N+ AILAGD Sbjct 73 AGEIGPEPDHERLVKAAVVCEMIHLATLYHDDVMDEASMRRGVESANSRWDNSTAILAGD 132 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGT---SENVDSIEQYLKVVQEKT 183 +L A +S L+A LGP AV++IA TFA+LVTGQMRET G + D+ + YL+V+ EKT Sbjct 133 FLFAHSSMLLADLGPAAVQLIAQTFAELVTGQMRETVGPGVGGRDEDAAQHYLRVIWEKT 192 Query 184 GSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDV 243 GSLI AA + GG +SGAT EQ+ RL R G VG AFQIADDIIDI S S ESGK PGTD+ Sbjct 193 GSLIAAAAQFGGEYSGATGEQIARLRRFGDAVGIAFQIADDIIDIASPSAESGKTPGTDL 252 Query 244 REGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQY 303 REGVHTLPM+YA+ PD RLR LL P+ DDAEV EAL LLR S GM RA+ L +Y Sbjct 253 REGVHTLPMIYAMEAGSPDSPRLRDLLAQPLTDDAEVAEALELLRVSDGMRRARATLEKY 312 Query 304 AAQARHELALLPDVPGRRALAALVDYTVSRHG 335 A EL LP P AL LV +TV R G Sbjct 313 VDDAMAELDALPAGPANEALRRLVRFTVDRVG 344 >gi|326383002|ref|ZP_08204691.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL B-59395] gi|326198138|gb|EGD55323.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL B-59395] Length=339 Score = 362 bits (928), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 196/337 (59%), Positives = 233/337 (70%), Gaps = 7/337 (2%) Query 6 TVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTV 65 + AG+DLG FA V+ + RVE L+ +EL D+++ ++ HL AGGKRFRP+F + Sbjct 3 STFAGLDLGTGEFAGQVQESLQRVEDLLISELSSGDDILVEAATHLAKAGGKRFRPMFAI 62 Query 66 LSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAG 125 LS+ G +P A V + VIEM HLATLYHDDVMDEA +RRGAPSANA+W N++AILAG Sbjct 63 LSSHFGAKPGADEVITSATVIEMTHLATLYHDDVMDEAALRRGAPSANARWSNSIAILAG 122 Query 126 DYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGS 185 D+L A AS LV+ LGPEAVRIIADTFA+LVTGQMRET G S D IE YLKVV EKTGS Sbjct 123 DFLFARASHLVSTLGPEAVRIIADTFAELVTGQMRETVGVSAGDDPIEHYLKVVWEKTGS 182 Query 186 LIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVRE 245 LI AGR G +GA + V+ L+RLG VVGTAFQ++DDIIDI S + +SGK PGTD+RE Sbjct 183 LIATAGRFGAYTAGADETTVDTLARLGDVVGTAFQVSDDIIDIASVTGDSGKTPGTDLRE 242 Query 246 GVHTLPMLYALRESGPDCARLRALLNGPVDD-------DAEVREALTLLRASPGMARAKD 298 GVHTLP+L ALR GPD ARL LL P DAEV EAL LL S GM A+ Sbjct 243 GVHTLPVLLALRGDGPDAARLTELLVDPATGAPRALTVDAEVDEALHLLVDSNGMKEARA 302 Query 299 VLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG 335 L A +A LA LPD P A ++LV YTV R G Sbjct 303 RLEAMADEANGLLAGLPDGPANAAFSSLVRYTVDRVG 339 >gi|294995177|ref|ZP_06800868.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 210] gi|339297632|gb|AEJ49742.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CCDC5180] Length=325 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 190/326 (59%), Positives = 242/326 (75%), Gaps = 4/326 (1%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 ++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPLFTVL Sbjct 1 MIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 +AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AILAGD Sbjct 61 AAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 Y ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EKTGSL Sbjct 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 IGA+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D+ + Sbjct 181 IGASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGADLGQA 237 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A YAAQ Sbjct 238 VHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAAYAAQ 296 Query 307 ARHELALLPDVPGRRALAALVDYTVS 332 AR EL LPD RRALA L+D+ VS Sbjct 297 AREELPYLPDRQPRRALATLIDHAVS 322 >gi|298524483|ref|ZP_07011892.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494277|gb|EFI29571.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=325 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 189/326 (58%), Positives = 241/326 (74%), Gaps = 4/326 (1%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 ++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPLFTVL Sbjct 1 MIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 +AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AILAGD Sbjct 61 AAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 Y ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EKTGSL Sbjct 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D+ + Sbjct 181 IAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGADLGQA 237 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A YAAQ Sbjct 238 VHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAAYAAQ 296 Query 307 ARHELALLPDVPGRRALAALVDYTVS 332 AR EL LPD RRALA L+D+ VS Sbjct 297 AREELPYLPDCQPRRALATLIDHAVS 322 >gi|336460465|gb|EGO39360.1| geranylgeranyl pyrophosphate synthase [Mycobacterium avium subsp. paratuberculosis S397] Length=246 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 188/238 (79%), Positives = 207/238 (87%), Gaps = 0/238 (0%) Query 1 VRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFR 60 V TPATVVAGVD GD FAA VR GV R+EQLMDTELR AD++M++SL HLF AGGKRFR Sbjct 9 VNTPATVVAGVDFGDPAFAATVRDGVGRIEQLMDTELRSADDIMTESLTHLFKAGGKRFR 68 Query 61 PLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV 120 PL TVLSAQIGP PDAA VT+AGAVIE++HLATLYHDDVMDEA+VRRG P+AN +WGNNV Sbjct 69 PLLTVLSAQIGPDPDAAEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNV 128 Query 121 AILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQ 180 AILAGDYL ATASRLV+RLGPEAVR+IA+TFAQLVTGQMRETRG + D IE YLKVV Sbjct 129 AILAGDYLFATASRLVSRLGPEAVRLIAETFAQLVTGQMRETRGRKQGSDPIEHYLKVVY 188 Query 181 EKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKL 238 EKT LI AAGR G MFSGA +QVERLSRLGG+VGTAFQI+DDIIDIDS+S ESGKL Sbjct 189 EKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKL 246 >gi|254231286|ref|ZP_04924613.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis C] gi|124600345|gb|EAY59355.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis C] Length=333 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 190/330 (58%), Positives = 243/330 (74%), Gaps = 4/330 (1%) Query 3 TPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPL 62 T +++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPL Sbjct 5 TATSMIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPL 64 Query 63 FTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAI 122 FTVL+AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AI Sbjct 65 FTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAI 124 Query 123 LAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEK 182 LAGDY ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EK Sbjct 125 LAGDYRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEK 184 Query 183 TGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTD 242 TGSLI A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D Sbjct 185 TGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGAD 241 Query 243 VREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQ 302 + + VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A Sbjct 242 LGQAVHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAA 300 Query 303 YAAQARHELALLPDVPGRRALAALVDYTVS 332 YAAQAR EL LPD RRALA L+D+ VS Sbjct 301 YAAQAREELPYLPDRQPRRALATLIDHAVS 330 >gi|167968055|ref|ZP_02550332.1| polyprenyl synthetase [Mycobacterium tuberculosis H37Ra] Length=331 Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 189/330 (58%), Positives = 243/330 (74%), Gaps = 4/330 (1%) Query 3 TPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPL 62 T +++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPL Sbjct 3 TATSMIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPL 62 Query 63 FTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAI 122 FTVL+AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AI Sbjct 63 FTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAI 122 Query 123 LAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEK 182 LAGDY ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EK Sbjct 123 LAGDYRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEK 182 Query 183 TGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTD 242 TGSLI A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D Sbjct 183 TGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGAD 239 Query 243 VREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQ 302 + + VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A Sbjct 240 LGQAVHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAA 298 Query 303 YAAQARHELALLPDVPGRRALAALVDYTVS 332 YAAQAR EL LPD RRALA L+D+ +S Sbjct 299 YAAQAREELPYLPDRQPRRALATLIDHAIS 328 >gi|308231691|ref|ZP_07413460.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu001] gi|308378784|ref|ZP_07483890.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu010] gi|308379930|ref|ZP_07488129.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu011] gi|308397859|ref|ZP_07492630.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu012] gi|308216330|gb|EFO75729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu001] gi|308359223|gb|EFP48074.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu010] gi|308363135|gb|EFP51986.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu011] gi|308366792|gb|EFP55643.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu012] Length=333 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 189/330 (58%), Positives = 243/330 (74%), Gaps = 4/330 (1%) Query 3 TPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPL 62 T +++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPL Sbjct 5 TATSMIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPL 64 Query 63 FTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAI 122 FTVL+AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AI Sbjct 65 FTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAI 124 Query 123 LAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEK 182 LAGDY ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EK Sbjct 125 LAGDYRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEK 184 Query 183 TGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTD 242 TGSLI A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D Sbjct 185 TGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGAD 241 Query 243 VREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQ 302 + + VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A Sbjct 242 LGQAVHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAA 300 Query 303 YAAQARHELALLPDVPGRRALAALVDYTVS 332 YAAQAR EL LPD RRALA L+D+ +S Sbjct 301 YAAQAREELPYLPDRQPRRALATLIDHAIS 330 >gi|31792180|ref|NP_854673.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97] gi|121636916|ref|YP_977139.1| putative polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822198|ref|YP_001286952.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis F11] 29 more sequence titles Length=325 Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 189/326 (58%), Positives = 241/326 (74%), Gaps = 4/326 (1%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 ++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPLFTVL Sbjct 1 MIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 +AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AILAGD Sbjct 61 AAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 Y ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EKTGSL Sbjct 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D+ + Sbjct 181 IAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGADLGQA 237 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A YAAQ Sbjct 238 VHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAAYAAQ 296 Query 307 ARHELALLPDVPGRRALAALVDYTVS 332 AR EL LPD RRALA L+D+ VS Sbjct 297 AREELPYLPDRQPRRALATLIDHAVS 322 >gi|339631052|ref|YP_004722694.1| polyprenyl-diphosphate synthase [Mycobacterium africanum GM041182] gi|339330408|emb|CCC26071.1| putative polyprenyl-diphosphate synthase GRCC2 (polyprenyl pyrophosphate synthetase) [Mycobacterium africanum GM041182] Length=325 Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 189/326 (58%), Positives = 241/326 (74%), Gaps = 4/326 (1%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 ++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPLFTVL Sbjct 1 MIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 +AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AILAGD Sbjct 61 AAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 Y ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EKTGSL Sbjct 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D+ + Sbjct 181 IAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGADLGQA 237 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A YAAQ Sbjct 238 VHTLPMLYALREQTPDTSRLRELLGGPIHDD-HVAEALTLLRCSPGIGKAKNVVAAYAAQ 296 Query 307 ARHELALLPDVPGRRALAALVDYTVS 332 AR EL LPD RRALA L+D+ VS Sbjct 297 AREELPYLPDRQPRRALATLIDHAVS 322 >gi|15608129|ref|NP_215504.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv] gi|148660770|ref|YP_001282293.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis H37Ra] gi|2052123|emb|CAB08149.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis H37Rv] gi|148504922|gb|ABQ72731.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis H37Ra] Length=325 Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 188/326 (58%), Positives = 241/326 (74%), Gaps = 4/326 (1%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 ++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPLFTVL Sbjct 1 MIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 +AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AILAGD Sbjct 61 AAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 Y ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EKTGSL Sbjct 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D+ + Sbjct 181 IAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGADLGQA 237 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A YAAQ Sbjct 238 VHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAAYAAQ 296 Query 307 ARHELALLPDVPGRRALAALVDYTVS 332 AR EL LPD RRALA L+D+ +S Sbjct 297 AREELPYLPDRQPRRALATLIDHAIS 322 >gi|289744725|ref|ZP_06504103.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 02_1987] gi|289685253|gb|EFD52741.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 02_1987] Length=325 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 188/326 (58%), Positives = 241/326 (74%), Gaps = 4/326 (1%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 ++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPLFTVL Sbjct 1 MIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 +AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AILAGD Sbjct 61 AAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 Y ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EKTGSL Sbjct 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D+ + Sbjct 181 IAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGADLGQA 237 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLPMLYALRE PD +R+R LL GP+ DD V EALTLLR SPG+ +AK+V+A YAAQ Sbjct 238 VHTLPMLYALREQTPDTSRMRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAAYAAQ 296 Query 307 ARHELALLPDVPGRRALAALVDYTVS 332 AR EL LPD RRALA L+D+ VS Sbjct 297 AREELPYLPDRQPRRALATLIDHAVS 322 >gi|308370103|ref|ZP_07420299.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu002] gi|308370565|ref|ZP_07422005.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu003] gi|308371822|ref|ZP_07426360.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu004] 13 more sequence titles Length=333 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 189/330 (58%), Positives = 242/330 (74%), Gaps = 4/330 (1%) Query 3 TPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPL 62 T +++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPL Sbjct 5 TATSMIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPL 64 Query 63 FTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAI 122 FTVL+AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AI Sbjct 65 FTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAI 124 Query 123 LAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEK 182 LAGDY ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EK Sbjct 125 LAGDYRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEK 184 Query 183 TGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTD 242 TGSLI A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D Sbjct 185 TGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGAD 241 Query 243 VREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQ 302 + + VHTLPM YALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A Sbjct 242 LGQAVHTLPMPYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAA 300 Query 303 YAAQARHELALLPDVPGRRALAALVDYTVS 332 YAAQAR EL LPD RRALA L+D+ VS Sbjct 301 YAAQAREELPYLPDRQPRRALATLIDHAVS 330 >gi|15840414|ref|NP_335451.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|13880584|gb|AAK45265.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] Length=333 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 189/330 (58%), Positives = 242/330 (74%), Gaps = 4/330 (1%) Query 3 TPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPL 62 T +++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPL Sbjct 5 TATSMIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPL 64 Query 63 FTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAI 122 FTVL+AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AI Sbjct 65 FTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAI 124 Query 123 LAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEK 182 LAGDY ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE L+VV EK Sbjct 125 LAGDYRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHCLRVVHEK 184 Query 183 TGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTD 242 TGSLI A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D Sbjct 185 TGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGAD 241 Query 243 VREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQ 302 + + VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A Sbjct 242 LGQAVHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAA 300 Query 303 YAAQARHELALLPDVPGRRALAALVDYTVS 332 YAAQAR EL LPD RRALA L+D+ VS Sbjct 301 YAAQAREELPYLPDRQPRRALATLIDHAVS 330 >gi|289446570|ref|ZP_06436314.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CPHL_A] gi|289419528|gb|EFD16729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CPHL_A] Length=325 Score = 355 bits (911), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 188/326 (58%), Positives = 240/326 (74%), Gaps = 4/326 (1%) Query 7 VVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVL 66 ++ V LGD F A V G+AR+ +L+++EL QADEVM D++ HL +AGG FRPLFTVL Sbjct 1 MIPAVSLGDPQFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVL 60 Query 67 SAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGD 126 +AQ+G PD VTVAGA IE++HL TL HD V+DE+ + R PS N +W NN AILAG Sbjct 61 AAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGG 120 Query 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186 Y ATAS+L +RL PEA ++A+ FA+L+TGQMR TRG + ++D+IE YL+VV EKTGSL Sbjct 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSL 180 Query 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246 I A+G+LG SGA +EQ+ R++RLG ++G AF+I+ DII I S +S L G D+ + Sbjct 181 IAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAI---SGDSATLSGADLGQA 237 Query 247 VHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQ 306 VHTLPMLYALRE PD +RLR LL GP+ DD V EALTLLR SPG+ +AK+V+A YAAQ Sbjct 238 VHTLPMLYALREQTPDTSRLRELLAGPIHDD-HVAEALTLLRCSPGIGKAKNVVAAYAAQ 296 Query 307 ARHELALLPDVPGRRALAALVDYTVS 332 AR EL LPD RRALA L+D+ VS Sbjct 297 AREELPYLPDRQPRRALATLIDHAVS 322 Lambda K H 0.318 0.134 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 602106349260 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40