BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0569 Length=88 Score E Sequences producing significant alignments: (Bits) Value gi|253797501|ref|YP_003030502.1| hypothetical protein TBMG_00574... 179 9e-44 gi|289446116|ref|ZP_06435860.1| conserved hypothetical protein [... 179 1e-43 gi|15607709|ref|NP_215083.1| hypothetical protein Rv0569 [Mycoba... 179 2e-43 gi|15839967|ref|NP_335004.1| hypothetical protein MT0595 [Mycoba... 179 2e-43 gi|240169272|ref|ZP_04747931.1| hypothetical protein MkanA1_0815... 158 3e-37 gi|126433718|ref|YP_001069409.1| hypothetical protein Mjls_1112 ... 139 2e-31 gi|119867153|ref|YP_937105.1| hypothetical protein Mkms_1101 [My... 139 2e-31 gi|108798057|ref|YP_638254.1| hypothetical protein Mmcs_1084 [My... 129 1e-28 gi|296169088|ref|ZP_06850747.1| conserved hypothetical protein [... 108 2e-22 gi|167966535|ref|ZP_02548812.1| hypothetical protein MtubH3_0009... 94.7 4e-18 gi|302526597|ref|ZP_07278939.1| conserved hypothetical protein [... 90.9 6e-17 gi|118470402|ref|YP_888635.1| hypothetical protein MSMEG_4361 [M... 90.5 8e-17 gi|240172098|ref|ZP_04750757.1| hypothetical protein MkanA1_2247... 87.0 9e-16 gi|75766092|pdb|2A7Y|A Chain A, Solution Structure Of The Conser... 85.1 3e-15 gi|340627310|ref|YP_004745762.1| hypothetical protein MCAN_23281... 85.1 3e-15 gi|15609439|ref|NP_216818.1| hypothetical protein Rv2302 [Mycoba... 84.7 4e-15 gi|302526803|ref|ZP_07279145.1| predicted protein [Streptomyces ... 72.4 2e-11 gi|271965557|ref|YP_003339753.1| hypothetical protein Sros_4102 ... 68.9 2e-10 gi|296270326|ref|YP_003652958.1| hypothetical protein Tbis_2359 ... 67.8 5e-10 gi|134099022|ref|YP_001104683.1| hypothetical protein SACE_2460 ... 67.8 5e-10 gi|269125889|ref|YP_003299259.1| hypothetical protein Tcur_1645 ... 67.0 9e-10 gi|86743177|ref|YP_483577.1| signal-transduction protein [Franki... 66.2 1e-09 gi|326329315|ref|ZP_08195640.1| putative DNA-binding protein [No... 65.9 2e-09 gi|329934874|ref|ZP_08284915.1| DNA-binding protein [Streptomyce... 63.2 1e-08 gi|336176610|ref|YP_004581985.1| putative signal transduction pr... 63.2 1e-08 gi|119714551|ref|YP_921516.1| signal-transduction protein [Nocar... 62.4 2e-08 gi|291006881|ref|ZP_06564854.1| hypothetical protein SeryN2_2036... 61.6 4e-08 gi|158318670|ref|YP_001511178.1| signal-transduction protein [Fr... 60.8 6e-08 gi|326330363|ref|ZP_08196673.1| putative DNA-binding protein [No... 60.1 1e-07 gi|334336369|ref|YP_004541521.1| Domain of unknown function DUF1... 58.9 2e-07 gi|317126431|ref|YP_004100543.1| hypothetical protein Intca_3333... 58.9 2e-07 gi|271966200|ref|YP_003340396.1| hypothetical protein Sros_4834 ... 58.5 3e-07 gi|269127736|ref|YP_003301106.1| hypothetical protein Tcur_3532 ... 58.2 4e-07 gi|116670881|ref|YP_831814.1| hypothetical protein Arth_2334 [Ar... 57.0 1e-06 gi|258652659|ref|YP_003201815.1| hypothetical protein Namu_2457 ... 56.6 1e-06 gi|256390756|ref|YP_003112320.1| hypothetical protein Caci_1558 ... 55.8 2e-06 gi|311894253|dbj|BAJ26661.1| hypothetical protein KSE_08220 [Kit... 55.8 2e-06 gi|269955704|ref|YP_003325493.1| hypothetical protein Xcel_0903 ... 55.5 3e-06 gi|229822242|ref|YP_002883768.1| hypothetical protein Bcav_3764 ... 55.5 3e-06 gi|111225656|ref|YP_716450.1| hypothetical protein FRAAL6314 [Fr... 54.7 4e-06 gi|290961745|ref|YP_003492927.1| hypothetical protein SCAB_74091... 54.3 5e-06 gi|290955591|ref|YP_003486773.1| DNA-binding protein [Streptomyc... 54.3 6e-06 gi|288916649|ref|ZP_06411024.1| protein of unknown function DUF1... 53.9 8e-06 gi|297195417|ref|ZP_06912815.1| conserved hypothetical protein [... 53.5 1e-05 gi|86743127|ref|YP_483527.1| hypothetical protein Francci3_4452 ... 53.1 1e-05 gi|134103069|ref|YP_001108730.1| hypothetical protein SACE_6639 ... 53.1 1e-05 gi|158311979|ref|YP_001504487.1| hypothetical protein Franean1_0... 53.1 1e-05 gi|297154763|gb|ADI04475.1| hypothetical protein SBI_01354 [Stre... 52.8 2e-05 gi|337769191|emb|CCB77904.1| conserved protein of unknown functi... 52.4 2e-05 gi|328881231|emb|CCA54470.1| hypothetical protein SVEN_1183 [Str... 52.4 2e-05 >gi|253797501|ref|YP_003030502.1| hypothetical protein TBMG_00574 [Mycobacterium tuberculosis KZN 1435] gi|289552821|ref|ZP_06442031.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|308374047|ref|ZP_07434619.2| hypothetical protein TMFG_01871 [Mycobacterium tuberculosis SUMu006] gi|253319004|gb|ACT23607.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289437453|gb|EFD19946.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|308343262|gb|EFP32113.1| hypothetical protein TMFG_01871 [Mycobacterium tuberculosis SUMu006] Length=111 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT Sbjct 24 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 83 Query 61 AEEQNAADERAQHRFGAVQSAILHARGT 88 AEEQNAADERAQHRFGAVQSAILHARGT Sbjct 84 AEEQNAADERAQHRFGAVQSAILHARGT 111 >gi|289446116|ref|ZP_06435860.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289419074|gb|EFD16275.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|328457286|gb|AEB02709.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length=127 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT Sbjct 40 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 99 Query 61 AEEQNAADERAQHRFGAVQSAILHARGT 88 AEEQNAADERAQHRFGAVQSAILHARGT Sbjct 100 AEEQNAADERAQHRFGAVQSAILHARGT 127 >gi|15607709|ref|NP_215083.1| hypothetical protein Rv0569 [Mycobacterium tuberculosis H37Rv] gi|31791751|ref|NP_854244.1| hypothetical protein Mb0584 [Mycobacterium bovis AF2122/97] gi|121636487|ref|YP_976710.1| hypothetical protein BCG_0614 [Mycobacterium bovis BCG str. Pasteur 1173P2] 65 more sequence titles Length=88 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT Sbjct 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 Query 61 AEEQNAADERAQHRFGAVQSAILHARGT 88 AEEQNAADERAQHRFGAVQSAILHARGT Sbjct 61 AEEQNAADERAQHRFGAVQSAILHARGT 88 >gi|15839967|ref|NP_335004.1| hypothetical protein MT0595 [Mycobacterium tuberculosis CDC1551] gi|289749068|ref|ZP_06508446.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|13880108|gb|AAK44818.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|289689655|gb|EFD57084.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=134 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT Sbjct 47 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 106 Query 61 AEEQNAADERAQHRFGAVQSAILHARGT 88 AEEQNAADERAQHRFGAVQSAILHARGT Sbjct 107 AEEQNAADERAQHRFGAVQSAILHARGT 134 >gi|240169272|ref|ZP_04747931.1| hypothetical protein MkanA1_08159 [Mycobacterium kansasii ATCC 12478] Length=90 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 75/88 (86%), Positives = 81/88 (93%), Gaps = 0/88 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKA VGDWLVIKG TID+PDHRGLIIEV S+DGSPPYVVRWL+TDHVATV+PGPDAVVVT Sbjct 3 MKANVGDWLVIKGTTIDRPDHRGLIIEVHSADGSPPYVVRWLDTDHVATVVPGPDAVVVT 62 Query 61 AEEQNAADERAQHRFGAVQSAILHARGT 88 A EQ AADERAQHRFGAVQSAI+H + T Sbjct 63 AAEQKAADERAQHRFGAVQSAIMHGKST 90 >gi|126433718|ref|YP_001069409.1| hypothetical protein Mjls_1112 [Mycobacterium sp. JLS] gi|126233518|gb|ABN96918.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=93 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/85 (78%), Positives = 74/85 (88%), Gaps = 0/85 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKAKVGDWLVIKG T+D+ D RGLI EV S DGSPPYVVRWL++DH+ATV PGPDAVV+T Sbjct 6 MKAKVGDWLVIKGTTVDRHDQRGLITEVHSEDGSPPYVVRWLDSDHLATVFPGPDAVVLT 65 Query 61 AEEQNAADERAQHRFGAVQSAILHA 85 A+EQ+AADERA RFGAVQS ILH Sbjct 66 ADEQHAADERASRRFGAVQSEILHG 90 >gi|119867153|ref|YP_937105.1| hypothetical protein Mkms_1101 [Mycobacterium sp. KMS] gi|119693242|gb|ABL90315.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=88 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/85 (78%), Positives = 74/85 (88%), Gaps = 0/85 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKAKVGDWLVIKG T+D+ D RGLI EV S DGSPPYVVRWL++DH+ATV PGPDAVV+T Sbjct 1 MKAKVGDWLVIKGTTVDRHDQRGLITEVHSEDGSPPYVVRWLDSDHLATVFPGPDAVVLT 60 Query 61 AEEQNAADERAQHRFGAVQSAILHA 85 A+EQ+AADERA RFGAVQS ILH Sbjct 61 ADEQHAADERASRRFGAVQSEILHG 85 >gi|108798057|ref|YP_638254.1| hypothetical protein Mmcs_1084 [Mycobacterium sp. MCS] gi|108768476|gb|ABG07198.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length=84 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/81 (76%), Positives = 70/81 (87%), Gaps = 0/81 (0%) Query 5 VGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVTAEEQ 64 +GDWLVIKG T+D+ D RGLI EV S DGSPPYVVRWL++DH+ATV PGPDAVV+TA+EQ Sbjct 1 MGDWLVIKGTTVDRHDQRGLITEVHSEDGSPPYVVRWLDSDHLATVFPGPDAVVLTADEQ 60 Query 65 NAADERAQHRFGAVQSAILHA 85 +AADERA RFGAVQS ILH Sbjct 61 HAADERASRRFGAVQSEILHG 81 >gi|296169088|ref|ZP_06850747.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896208|gb|EFG75870.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=90 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/82 (68%), Positives = 62/82 (76%), Gaps = 0/82 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 + A GDWLVIK ATI +PD RGLI V S++G PPY VRWL T ATV PGPDA+VVT Sbjct 2 VNAHAGDWLVIKSATIGRPDLRGLITSVGSAEGEPPYHVRWLATGEEATVFPGPDAIVVT 61 Query 61 AEEQNAADERAQHRFGAVQSAI 82 A EQ AADERA+ RF AVQ+AI Sbjct 62 AAEQQAADERARSRFTAVQAAI 83 >gi|167966535|ref|ZP_02548812.1| hypothetical protein MtubH3_00092 [Mycobacterium tuberculosis H37Ra] Length=70 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 45/45 (100%), Positives = 45/45 (100%), Gaps = 0/45 (0%) Query 14 ATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 ATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV Sbjct 7 ATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 51 >gi|302526597|ref|ZP_07278939.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302435492|gb|EFL07308.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=89 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 44/82 (54%), Positives = 59/82 (72%), Gaps = 3/82 (3%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M A+ GDWLV+KG +D P+HRG I+ V S DG+PP+ VRWL DH +TV PGPDA+V+T Sbjct 1 MHAQRGDWLVVKGIHVDVPEHRGRIVAVGSPDGAPPFTVRWLGADHDSTVFPGPDAIVLT 60 Query 61 AEEQNAADERAQHR---FGAVQ 79 +E A D++A+ R GA+Q Sbjct 61 DDELAAQDQQARERVEGLGALQ 82 >gi|118470402|ref|YP_888635.1| hypothetical protein MSMEG_4361 [Mycobacterium smegmatis str. MC2 155] gi|118171689|gb|ABK72585.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=80 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 44/70 (63%), Positives = 52/70 (75%), Gaps = 0/70 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKAKVGD+LV+KGAT D+ D II VRS DGSPP+VVRWL H ATV PGPDA++++ Sbjct 1 MKAKVGDFLVVKGATTDRHDQHAEIIGVRSDDGSPPFVVRWLSDGHEATVYPGPDALIMS 60 Query 61 AEEQNAADER 70 EE A ER Sbjct 61 PEEHQRATER 70 >gi|240172098|ref|ZP_04750757.1| hypothetical protein MkanA1_22470 [Mycobacterium kansasii ATCC 12478] Length=80 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 43/65 (67%), Positives = 48/65 (74%), Gaps = 0/65 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKAKVGD+LV+KG T ++ D I EVRS DGSPPYVVRWL T H ATV PG DAVVV+ Sbjct 1 MKAKVGDYLVVKGTTTERHDQHAEITEVRSQDGSPPYVVRWLVTGHEATVYPGSDAVVVS 60 Query 61 AEEQN 65 A E Sbjct 61 AAEHE 65 >gi|75766092|pdb|2A7Y|A Chain A, Solution Structure Of The Conserved Hypothetical Protein Rv2302 From The Bacterium Mycobacterium Tuberculosis Length=83 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/64 (66%), Positives = 47/64 (74%), Gaps = 0/64 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M AKVGD+LV+KG T ++ D IIEVRS+DGSPPYVVRWL H TV PG DAVVVT Sbjct 4 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 63 Query 61 AEEQ 64 A E Sbjct 64 ATEH 67 >gi|340627310|ref|YP_004745762.1| hypothetical protein MCAN_23281 [Mycobacterium canettii CIPT 140010059] gi|340005500|emb|CCC44660.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=80 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/64 (66%), Positives = 47/64 (74%), Gaps = 0/64 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M AKVGD+LV+KG T ++ D IIEVRS+DGSPPYVVRWL H TV PG DAVVVT Sbjct 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHQTTVYPGSDAVVVT 60 Query 61 AEEQ 64 A E Sbjct 61 ATEH 64 >gi|15609439|ref|NP_216818.1| hypothetical protein Rv2302 [Mycobacterium tuberculosis H37Rv] gi|15841793|ref|NP_336830.1| hypothetical protein MT2359 [Mycobacterium tuberculosis CDC1551] gi|31793480|ref|NP_855973.1| hypothetical protein Mb2324 [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=80 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 42/64 (66%), Positives = 47/64 (74%), Gaps = 0/64 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M AKVGD+LV+KG T ++ D IIEVRS+DGSPPYVVRWL H TV PG DAVVVT Sbjct 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 Query 61 AEEQ 64 A E Sbjct 61 ATEH 64 >gi|302526803|ref|ZP_07279145.1| predicted protein [Streptomyces sp. AA4] gi|302435698|gb|EFL07514.1| predicted protein [Streptomyces sp. AA4] Length=88 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 30/67 (45%), Positives = 44/67 (66%), Gaps = 0/67 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M+A+ GDWLV+K + PD G ++ + DG PP+ VRW +V+T+ PGPDAVV+T Sbjct 1 MRAQPGDWLVVKSGRTEVPDRHGRVVATGTPDGGPPFTVRWFLGGYVSTIFPGPDAVVLT 60 Query 61 AEEQNAA 67 ++ AA Sbjct 61 EAQRRAA 67 >gi|271965557|ref|YP_003339753.1| hypothetical protein Sros_4102 [Streptosporangium roseum DSM 43021] gi|270508732|gb|ACZ87010.1| hypothetical protein Sros_4102 [Streptosporangium roseum DSM 43021] Length=77 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/72 (49%), Positives = 47/72 (66%), Gaps = 5/72 (6%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKA +GD L+++G + G+I+E+R DGSPPYVVRW+ DH + V PGPDA V+T Sbjct 1 MKASIGDKLIVEGTRHGEVRRVGVIVELRHPDGSPPYVVRWMGADHESLVFPGPDAHVMT 60 Query 61 A-----EEQNAA 67 EE+N A Sbjct 61 GGNLPDEERNRA 72 >gi|296270326|ref|YP_003652958.1| hypothetical protein Tbis_2359 [Thermobispora bispora DSM 43833] gi|296093113|gb|ADG89065.1| Domain of unknown function DUF1918 [Thermobispora bispora DSM 43833] Length=69 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/66 (52%), Positives = 45/66 (69%), Gaps = 1/66 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M+A+VGD LV+ G+ + + G IIEVR SDG PPY+VR+ E H A V PGPDA+V+ Sbjct 1 MQAQVGDRLVVHGSVVGEHGKEGEIIEVRGSDGRPPYLVRY-EDGHEALVFPGPDAIVIP 59 Query 61 AEEQNA 66 A +A Sbjct 60 ARSGSA 65 >gi|134099022|ref|YP_001104683.1| hypothetical protein SACE_2460 [Saccharopolyspora erythraea NRRL 2338] gi|133911645|emb|CAM01758.1| hypothetical protein SACE_2460 [Saccharopolyspora erythraea NRRL 2338] Length=80 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 28/55 (51%), Positives = 38/55 (70%), Gaps = 0/55 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPD 55 M+A+VGDWL+++G +D +G I EVR DG PPY+V WL+ HV+ PGPD Sbjct 1 MRAQVGDWLIVEGVHLDDHRRKGQITEVRGPDGEPPYMVHWLDDGHVSLFFPGPD 55 >gi|269125889|ref|YP_003299259.1| hypothetical protein Tcur_1645 [Thermomonospora curvata DSM 43183] gi|268310847|gb|ACY97221.1| Domain of unknown function DUF1918 [Thermomonospora curvata DSM 43183] Length=74 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/74 (46%), Positives = 44/74 (60%), Gaps = 1/74 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M+A VGD L ++G + QPD G IIEVR +G PPYVVR+ + H V PGPDAVV + Sbjct 1 MQASVGDRLHVRGNAVGQPDRSGEIIEVRGGEGGPPYVVRF-DDGHTGLVFPGPDAVVES 59 Query 61 AEEQNAADERAQHR 74 + + R R Sbjct 60 PRKASRKTGRVPQR 73 >gi|86743177|ref|YP_483577.1| signal-transduction protein [Frankia sp. CcI3] gi|86570039|gb|ABD13848.1| putative signal-transduction protein with CBS domains [Frankia sp. CcI3] Length=236 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/58 (56%), Positives = 39/58 (68%), Gaps = 0/58 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M+A GD LV+ T+ QPD G I+EVRS G PP+ VRW +T HV+ V PGPDA V Sbjct 167 MRAHPGDTLVVHRPTVTQPDRLGEILEVRSPAGDPPFTVRWSDTGHVSFVYPGPDAEV 224 >gi|326329315|ref|ZP_08195640.1| putative DNA-binding protein [Nocardioidaceae bacterium Broad-1] gi|325952890|gb|EGD44905.1| putative DNA-binding protein [Nocardioidaceae bacterium Broad-1] Length=72 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/69 (48%), Positives = 40/69 (58%), Gaps = 0/69 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M A VGD LV++G + +P I+EVR DGSPPYVVRW + H A V PG DA V Sbjct 2 MYAAVGDRLVVRGHNVGEPVRDAEILEVRHDDGSPPYVVRWSDNGHEALVFPGSDAFVEH 61 Query 61 AEEQNAADE 69 E + E Sbjct 62 FEHETGPQE 70 >gi|329934874|ref|ZP_08284915.1| DNA-binding protein [Streptomyces griseoaurantiacus M045] gi|329305696|gb|EGG49552.1| DNA-binding protein [Streptomyces griseoaurantiacus M045] Length=92 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/79 (41%), Positives = 47/79 (60%), Gaps = 0/79 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M+A +GD LV++ + G I+ + DG+PPY VRW +TD VA V PGPDA V Sbjct 4 MRAHLGDQLVVESNRSEATRREGEIVGLHRVDGTPPYDVRWSDTDEVAFVFPGPDAHVQC 63 Query 61 AEEQNAADERAQHRFGAVQ 79 E++ A++R + GA + Sbjct 64 TEQRKHAEQRERGASGATR 82 >gi|336176610|ref|YP_004581985.1| putative signal transduction protein with CBS domains [Frankia symbiont of Datisca glomerata] gi|334857590|gb|AEH08064.1| putative signal transduction protein with CBS domains [Frankia symbiont of Datisca glomerata] Length=267 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 40/58 (69%), Gaps = 0/58 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 ++A GD LVI G T+ +P+ G I+EVRS G PP++V W ++DHV+ PGPDA V Sbjct 190 VRAHPGDTLVIHGRTLGRPERSGEILEVRSPSGDPPFLVSWSDSDHVSFTYPGPDAEV 247 >gi|119714551|ref|YP_921516.1| signal-transduction protein [Nocardioides sp. JS614] gi|119535212|gb|ABL79829.1| putative signal-transduction protein with CBS domains [Nocardioides sp. JS614] Length=68 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/58 (52%), Positives = 36/58 (63%), Gaps = 0/58 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M A GD LVI G + +P G I+EVR DG+PPYVVRW + H + PGPDA V Sbjct 1 MHATKGDHLVIHGTHVGEPLRDGEIVEVRGPDGAPPYVVRWADNGHESLTYPGPDAEV 58 >gi|291006881|ref|ZP_06564854.1| hypothetical protein SeryN2_20368 [Saccharopolyspora erythraea NRRL 2338] Length=76 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 25/52 (49%), Positives = 34/52 (66%), Gaps = 0/52 (0%) Query 5 VGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDA 56 +GDWL+++G +D +G I EVR DG PPY+V WL+ HV+ PGPD Sbjct 1 MGDWLIVEGVHLDDHRRKGQITEVRGPDGEPPYMVHWLDDGHVSLFFPGPDT 52 >gi|158318670|ref|YP_001511178.1| signal-transduction protein [Frankia sp. EAN1pec] gi|158114075|gb|ABW16272.1| putative signal-transduction protein with CBS domains [Frankia sp. EAN1pec] Length=242 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M+A GD LV+ ++ Q D G I EVRS G PP+ VRW +T HV+ + PGPDA V Sbjct 173 MRAAPGDTLVVHRSSTQQSDRTGEIFEVRSPAGDPPFAVRWSDTGHVSFIYPGPDAEV 230 >gi|326330363|ref|ZP_08196673.1| putative DNA-binding protein [Nocardioidaceae bacterium Broad-1] gi|325951900|gb|EGD43930.1| putative DNA-binding protein [Nocardioidaceae bacterium Broad-1] Length=63 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/61 (50%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M A VGD LV+ G + IIEV DGSPPY+VRW ++DH + V PGPDA + Sbjct 1 MHASVGDHLVVAGTHVGDHVREAEIIEVSHPDGSPPYLVRWSDSDHESLVFPGPDAHIEP 60 Query 61 A 61 A Sbjct 61 A 61 >gi|334336369|ref|YP_004541521.1| Domain of unknown function DUF1918 [Isoptericola variabilis 225] gi|334106737|gb|AEG43627.1| Domain of unknown function DUF1918 [Isoptericola variabilis 225] Length=177 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 36/58 (63%), Gaps = 0/58 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 MKA VGD +V + G+++ VR++DGSPPY+VRW +T V PGPD VV Sbjct 1 MKASVGDRIVTASGVVGAAVREGVVVSVRNADGSPPYLVRWSDTGDETLVFPGPDTVV 58 >gi|317126431|ref|YP_004100543.1| hypothetical protein Intca_3333 [Intrasporangium calvum DSM 43043] gi|315590519|gb|ADU49816.1| Domain of unknown function DUF1918 [Intrasporangium calvum DSM 43043] Length=186 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 25/58 (44%), Positives = 38/58 (66%), Gaps = 1/58 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M+A+VGD +++ ID+P G I+E+R +G+PPY+VRW H + PGP AV+ Sbjct 1 MRARVGDRIILAAEHIDEPTRDGEILEIRGGEGAPPYLVRW-SNGHTGLIYPGPGAVL 57 >gi|271966200|ref|YP_003340396.1| hypothetical protein Sros_4834 [Streptosporangium roseum DSM 43021] gi|270509375|gb|ACZ87653.1| hypothetical protein Sros_4834 [Streptosporangium roseum DSM 43021] Length=68 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 25/58 (44%), Positives = 38/58 (66%), Gaps = 0/58 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 MKA+VGD L+++ + +P G+I + +DGSPPY V WL+ +H + PGPDA + Sbjct 1 MKAEVGDRLIVESTHLGEPRRIGIITALHHADGSPPYDVHWLDQEHDVMIFPGPDARI 58 >gi|269127736|ref|YP_003301106.1| hypothetical protein Tcur_3532 [Thermomonospora curvata DSM 43183] gi|268312694|gb|ACY99068.1| Domain of unknown function DUF1918 [Thermomonospora curvata DSM 43183] Length=67 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/62 (49%), Positives = 39/62 (63%), Gaps = 0/62 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M+A GD LVI + + +P G IIEV DG+PPY+VRW +T + + PGPDA VV Sbjct 1 MRAAAGDRLVIVRSGLHEPVRDGEIIEVIGPDGTPPYLVRWADTGRTSLIYPGPDARVVH 60 Query 61 AE 62 E Sbjct 61 YE 62 >gi|116670881|ref|YP_831814.1| hypothetical protein Arth_2334 [Arthrobacter sp. FB24] gi|116610990|gb|ABK03714.1| hypothetical protein Arth_2334 [Arthrobacter sp. FB24] Length=63 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/58 (52%), Positives = 38/58 (66%), Gaps = 1/58 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 MKA GD + I+G T+ + G IIEV +DG+PPYVVR+ + H TVIPG D VV Sbjct 1 MKATQGDRITIRGKTVGSAERHGQIIEVHGADGAPPYVVRF-DDGHETTVIPGGDFVV 57 >gi|258652659|ref|YP_003201815.1| hypothetical protein Namu_2457 [Nakamurella multipartita DSM 44233] gi|258555884|gb|ACV78826.1| Domain of unknown function DUF1918 [Nakamurella multipartita DSM 44233] Length=88 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/72 (42%), Positives = 41/72 (57%), Gaps = 2/72 (2%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKA+ GDWLV+ + D R I+ DG PP+ VRW + +H PGPD+ ++T Sbjct 1 MKAQPGDWLVVHSHIEGRHDRRAEILAT-GPDGEPPFTVRWTDDEHEGLFFPGPDSQILT 59 Query 61 AEEQNAADERAQ 72 EQ AA RA+ Sbjct 60 PAEQ-AAHARAE 70 >gi|256390756|ref|YP_003112320.1| hypothetical protein Caci_1558 [Catenulispora acidiphila DSM 44928] gi|256356982|gb|ACU70479.1| Domain of unknown function DUF1918 [Catenulispora acidiphila DSM 44928] Length=73 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 1/67 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M+A VGD L + A + + D G IIEV+ G+PPY+VR+ + H V PGPDAVV Sbjct 1 MRASVGDRLHVHAAHVGEADRTGEIIEVKGDSGTPPYLVRF-DDGHQGLVFPGPDAVVEC 59 Query 61 AEEQNAA 67 A + A Sbjct 60 AAGGDTA 66 >gi|311894253|dbj|BAJ26661.1| hypothetical protein KSE_08220 [Kitasatospora setae KM-6054] Length=66 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 36/58 (63%), Gaps = 1/58 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M A VGD + + ++ D RG I+EVR +DG PPY+VR+ E H V PGPD +V Sbjct 1 MHAMVGDHVHMYSRSVGMTDRRGEIVEVRGTDGEPPYLVRF-EDGHAGLVYPGPDCLV 57 >gi|269955704|ref|YP_003325493.1| hypothetical protein Xcel_0903 [Xylanimonas cellulosilytica DSM 15894] gi|269304385|gb|ACZ29935.1| Domain of unknown function DUF1918 [Xylanimonas cellulosilytica DSM 15894] Length=160 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/69 (44%), Positives = 36/69 (53%), Gaps = 0/69 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 MKAKVGD +V +D G I V +DG+PPY VRW +T + V PG D VV Sbjct 1 MKAKVGDRIVRASGKVDGAVRHGEITGVERADGTPPYRVRWQDTGEESLVFPGSDCVVAP 60 Query 61 AEEQNAADE 69 E A E Sbjct 61 GEPAEAPQE 69 >gi|229822242|ref|YP_002883768.1| hypothetical protein Bcav_3764 [Beutenbergia cavernae DSM 12333] gi|229568155|gb|ACQ82006.1| Domain of unknown function DUF1918 [Beutenbergia cavernae DSM 12333] Length=67 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/59 (48%), Positives = 38/59 (65%), Gaps = 2/59 (3%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVV 59 MKA +GD + I A +DQ + G ++EV DG PYVVRW + H +T++PGPD VV Sbjct 1 MKAVLGDKVRIATAHLDQTERDGTVVEVHGEDG--PYVVRWDDDGHTSTIVPGPDCRVV 57 >gi|111225656|ref|YP_716450.1| hypothetical protein FRAAL6314 [Frankia alni ACN14a] gi|111153188|emb|CAJ64937.1| hypothetical protein FRAAL6314 [Frankia alni ACN14a] Length=234 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/68 (43%), Positives = 37/68 (55%), Gaps = 0/68 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 + A GD LV+ PD G I E R+ G PP+ VRW +T HV+ V PGPDA V Sbjct 164 LHAHPGDTLVVHSHIPRAPDRLGEICEARTDAGDPPFAVRWSDTGHVSFVYPGPDAEVRR 223 Query 61 AEEQNAAD 68 + + AD Sbjct 224 SGAKPVAD 231 >gi|290961745|ref|YP_003492927.1| hypothetical protein SCAB_74091 [Streptomyces scabiei 87.22] gi|260651271|emb|CBG74393.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=65 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/58 (45%), Positives = 36/58 (63%), Gaps = 0/58 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M+A VGD L++ G T+ D ++EV DG+PPY VR+ + H A + PGPD VV Sbjct 1 MQAAVGDTLLVHGRTVGHHDRTARVLEVLGHDGNPPYRVRFEDDGHEALMSPGPDTVV 58 >gi|290955591|ref|YP_003486773.1| DNA-binding protein [Streptomyces scabiei 87.22] gi|260645117|emb|CBG68203.1| putative DNA-binding protein [Streptomyces scabiei 87.22] Length=307 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 36/58 (63%), Gaps = 0/58 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M+A++GD LVI+ T G I+ + DG+PPY VRW +T+ V V PGPDA V Sbjct 1 MEARLGDQLVIETTTSGATRRDGEIVGLHHEDGTPPYDVRWSDTNEVTLVFPGPDAHV 58 >gi|288916649|ref|ZP_06411024.1| protein of unknown function DUF1918 [Frankia sp. EUN1f] gi|288351904|gb|EFC86106.1| protein of unknown function DUF1918 [Frankia sp. EUN1f] Length=68 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/58 (44%), Positives = 35/58 (61%), Gaps = 1/58 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M A VGD V+ G T+ P+ G+IIEVR + G PP++VRW + H PG D+ + Sbjct 1 MYASVGDRFVVHGRTVGDPERHGVIIEVRGTAGGPPFMVRW-DDGHEGLFFPGADSNI 57 >gi|297195417|ref|ZP_06912815.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719210|gb|EDY63118.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=63 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 38/58 (66%), Gaps = 1/58 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M+A VGD L++ G T+ Q D ++EV S+G+PP+ VR+ E H A + PGPD VV Sbjct 1 MQASVGDTLLVHGRTVGQHDKVAEVVEVLGSEGNPPFRVRF-EDGHEALLSPGPDTVV 57 >gi|86743127|ref|YP_483527.1| hypothetical protein Francci3_4452 [Frankia sp. CcI3] gi|86569989|gb|ABD13798.1| hypothetical protein Francci3_4452 [Frankia sp. CcI3] Length=91 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/67 (38%), Positives = 37/67 (56%), Gaps = 1/67 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M A VG+ V+ G T+ P+ G ++EVR DG PP+VVRW + H P D++V Sbjct 24 MFASVGERFVVHGRTVGSPERHGTVVEVRGEDGGPPFVVRW-DDGHEGLFFPSYDSLVEL 82 Query 61 AEEQNAA 67 + +A Sbjct 83 RPSRESA 89 >gi|134103069|ref|YP_001108730.1| hypothetical protein SACE_6639 [Saccharopolyspora erythraea NRRL 2338] gi|291008977|ref|ZP_06566950.1| hypothetical protein SeryN2_31018 [Saccharopolyspora erythraea NRRL 2338] gi|133915692|emb|CAM05805.1| hypothetical protein SACE_6639 [Saccharopolyspora erythraea NRRL 2338] Length=64 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 36/58 (63%), Gaps = 1/58 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 MKA VGD L + +D+ D G I+EVR DG+PPY+VR+ + H + V PG D V Sbjct 1 MKAAVGDQLHVHSKHVDEADQTGEILEVRGPDGAPPYLVRFKDG-HQSLVYPGGDCEV 57 >gi|158311979|ref|YP_001504487.1| hypothetical protein Franean1_0114 [Frankia sp. EAN1pec] gi|158107384|gb|ABW09581.1| Domain of unknown function DUF1918 [Frankia sp. EAN1pec] Length=68 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/58 (44%), Positives = 33/58 (57%), Gaps = 1/58 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 M A VGD V+ G T+ P+ G+I EVR G PPY+VRW + H PG D+ + Sbjct 1 MYASVGDRFVVHGRTVGCPERHGVITEVRGVAGGPPYLVRW-DDGHEGLFFPGADSTI 57 >gi|297154763|gb|ADI04475.1| hypothetical protein SBI_01354 [Streptomyces bingchenggensis BCW-1] Length=395 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/66 (41%), Positives = 38/66 (58%), Gaps = 0/66 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M+A VGD L+++ T G I+ V DG+PPY VRW ++ V+ V PGPDA + T Sbjct 3 MRAHVGDHLIVESPTTGVTRRDGEIVGVHHHDGTPPYDVRWSDSGRVSLVFPGPDAHIQT 62 Query 61 AEEQNA 66 +A Sbjct 63 EARASA 68 >gi|337769191|emb|CCB77904.1| conserved protein of unknown function [Streptomyces cattleya NRRL 8057] Length=70 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/58 (49%), Positives = 36/58 (63%), Gaps = 1/58 (1%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVV 58 MKA+ GD L+ G + Q DH G I+EV + G PPY V++ E H V PGPD+VV Sbjct 1 MKAQQGDELLQHGRVVGQRDHVGKIVEVLGTGGEPPYRVKF-EDGHEGVVSPGPDSVV 57 >gi|328881231|emb|CCA54470.1| hypothetical protein SVEN_1183 [Streptomyces venezuelae ATCC 10712] Length=67 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/67 (38%), Positives = 39/67 (59%), Gaps = 0/67 (0%) Query 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 M+A VGD L++ G T+ D +++V +G+PPY V++ + H A + PGPD VV Sbjct 1 MQANVGDTLLVHGRTVGHHDRTAEVLQVLGENGTPPYRVKFEDDGHEALMSPGPDTVVRH 60 Query 61 AEEQNAA 67 E A+ Sbjct 61 HPEAGAS 67 Lambda K H 0.317 0.133 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130095868320 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40