BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0576
Length=434
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607716|ref|NP_215090.1| ArsR family transcriptional regulat... 868 0.0
gi|15839977|ref|NP_335014.1| ArsR family transcriptional regulat... 867 0.0
gi|31791758|ref|NP_854251.1| ArsR family transcriptional regulat... 866 0.0
gi|289744289|ref|ZP_06503667.1| transcriptional regulator [Mycob... 865 0.0
gi|298524064|ref|ZP_07011473.1| conserved hypothetical protein [... 860 0.0
gi|340625607|ref|YP_004744059.1| putative transcriptional regula... 854 0.0
gi|339293619|gb|AEJ45730.1| ArsR family transcriptional regulato... 788 0.0
gi|289749073|ref|ZP_06508451.1| transcriptional regulator, arsR-... 702 0.0
gi|289568507|ref|ZP_06448734.1| transcriptional regulator, arsR-... 537 2e-150
gi|183980963|ref|YP_001849254.1| transcriptional regulator [Myco... 502 5e-140
gi|118616490|ref|YP_904822.1| transcriptional regulator [Mycobac... 502 6e-140
gi|308375201|ref|ZP_07667963.1| hypothetical protein TMGG_03591 ... 488 7e-136
gi|289441962|ref|ZP_06431706.1| ArsR family transcriptional regu... 486 3e-135
gi|289446124|ref|ZP_06435868.1| transcriptional regulator, arsR-... 486 3e-135
gi|226363409|ref|YP_002781191.1| hypothetical protein ROP_39990 ... 420 2e-115
gi|111021105|ref|YP_704077.1| hypothetical protein RHA1_ro04123 ... 413 2e-113
gi|308375200|ref|ZP_07667962.1| putative transcriptional regulat... 370 4e-100
gi|108801947|ref|YP_642144.1| hypothetical protein Mmcs_4984 [My... 181 1e-43
gi|296166899|ref|ZP_06849316.1| conserved hypothetical protein [... 175 2e-41
gi|342860029|ref|ZP_08716681.1| hypothetical protein MCOL_14160 ... 174 3e-41
gi|306786689|ref|ZP_07425011.1| hypothetical protein TMCG_01279 ... 171 2e-40
gi|15610909|ref|NP_218290.1| hypothetical protein Rv3773c [Mycob... 171 2e-40
gi|254552889|ref|ZP_05143336.1| hypothetical protein Mtube_20997... 171 2e-40
gi|340628743|ref|YP_004747195.1| hypothetical protein MCAN_37931... 170 4e-40
gi|183985296|ref|YP_001853587.1| hypothetical protein MMAR_5328 ... 168 2e-39
gi|289759939|ref|ZP_06519317.1| conserved hypothetical protein [... 167 2e-39
gi|240168540|ref|ZP_04747199.1| hypothetical protein MkanA1_0445... 167 2e-39
gi|294995313|ref|ZP_06801004.1| hypothetical protein Mtub2_12583... 167 3e-39
gi|333992695|ref|YP_004525309.1| hypothetical protein JDM601_405... 167 3e-39
gi|118619540|ref|YP_907872.1| hypothetical protein MUL_4409 [Myc... 164 3e-38
gi|41406348|ref|NP_959184.1| hypothetical protein MAP0250 [Mycob... 164 3e-38
gi|336461601|gb|EGO40467.1| TIGR03086 family protein [Mycobacter... 164 3e-38
gi|254822475|ref|ZP_05227476.1| hypothetical protein MintA_21251... 160 4e-37
gi|118462650|ref|YP_879539.1| hypothetical protein MAV_0248 [Myc... 159 6e-37
gi|254773305|ref|ZP_05214821.1| hypothetical protein MaviaA2_012... 159 6e-37
gi|298527247|ref|ZP_07014656.1| conserved hypothetical protein [... 152 1e-34
gi|111021106|ref|YP_704078.1| ArsR family transcriptional regula... 133 6e-29
gi|215261454|pdb|3F6V|A Chain A, Crystal Structure Of Possible T... 132 8e-29
gi|226363410|ref|YP_002781192.1| ArsR family transcriptional reg... 132 2e-28
gi|118468028|ref|YP_891036.1| hypothetical protein MSMEG_6832 [M... 132 2e-28
gi|169631520|ref|YP_001705169.1| hypothetical protein MAB_4446 [... 120 6e-25
gi|289755906|ref|ZP_06515284.1| conserved hypothetical protein [... 116 9e-24
gi|328886074|emb|CCA59313.1| hypothetical protein SVEN_6027 [Str... 110 3e-22
gi|31794945|ref|NP_857438.1| hypothetical protein Mb3801c [Mycob... 105 1e-20
gi|116252894|ref|YP_768732.1| transcriptional regulator [Rhizobi... 102 1e-19
gi|150376025|ref|YP_001312621.1| activator of Hsp90 ATPase 1 fam... 102 2e-19
gi|16263994|ref|NP_436786.1| hypothetical protein SM_b20256 [Sin... 101 3e-19
gi|159037174|ref|YP_001536427.1| activator of Hsp90 ATPase 1 fam... 100 5e-19
gi|227818582|ref|YP_002822553.1| hypothetical protein NGR_b03360... 100 7e-19
gi|218463462|ref|ZP_03503553.1| hypothetical protein RetlK5_3030... 99.4 1e-18
>gi|15607716|ref|NP_215090.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
H37Rv]
gi|148660345|ref|YP_001281868.1| transcription regulator ArsR [Mycobacterium tuberculosis H37Ra]
gi|254363534|ref|ZP_04979580.1| hypothetical transcriptional regulatory protein (possibly arsR-family)
[Mycobacterium tuberculosis str. Haarlem]
19 more sequence titles
gi|254549531|ref|ZP_05139978.1| transcription regulator ArsR [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289552828|ref|ZP_06442038.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
KZN 605]
gi|289760695|ref|ZP_06520073.1| transcriptional regulator [Mycobacterium tuberculosis GM 1503]
gi|306966591|ref|ZP_07479252.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu009]
gi|306970784|ref|ZP_07483445.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu010]
gi|308370451|ref|ZP_07421540.2| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu003]
gi|308372937|ref|ZP_07430440.2| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu005]
gi|2909635|emb|CAA17447.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY ARSR-FAMILY)
[Mycobacterium tuberculosis H37Rv]
gi|134149048|gb|EBA41093.1| hypothetical transcriptional regulatory protein (possibly arsR-family)
[Mycobacterium tuberculosis str. Haarlem]
gi|148504497|gb|ABQ72306.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|289437460|gb|EFD19953.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
KZN 605]
gi|289708201|gb|EFD72217.1| transcriptional regulator [Mycobacterium tuberculosis GM 1503]
gi|308332000|gb|EFP20851.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu003]
gi|308339393|gb|EFP28244.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu005]
gi|308355735|gb|EFP44586.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu009]
gi|308359689|gb|EFP48540.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu010]
gi|323721050|gb|EGB30114.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A]
gi|328457293|gb|AEB02716.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
KZN 4207]
gi|344218397|gb|AEM99027.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
CTRI-2]
Length=434
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/434 (100%), Positives = 434/434 (100%), Gaps = 0/434 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER
Sbjct 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
Query 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE
Sbjct 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
Query 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA
Sbjct 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
Query 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 360
AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL
Sbjct 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 360
Query 361 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 420
VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA
Sbjct 361 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 420
Query 421 FTGRQPTAGHVSAT 434
FTGRQPTAGHVSAT
Sbjct 421 FTGRQPTAGHVSAT 434
>gi|15839977|ref|NP_335014.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|148821777|ref|YP_001286531.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
F11]
gi|167967026|ref|ZP_02549303.1| hypothetical transcriptional regulatory protein, arsR-family
[Mycobacterium tuberculosis H37Ra]
13 more sequence titles
gi|253797509|ref|YP_003030510.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
KZN 1435]
gi|297633068|ref|ZP_06950848.1| transcriptional regulator, arsR-family protein [Mycobacterium
tuberculosis KZN 4207]
gi|297730045|ref|ZP_06959163.1| transcriptional regulator, arsR-family protein [Mycobacterium
tuberculosis KZN R506]
gi|306774680|ref|ZP_07413017.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu001]
gi|306787588|ref|ZP_07425910.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu004]
gi|306802184|ref|ZP_07438852.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu008]
gi|313657373|ref|ZP_07814253.1| transcriptional regulator, arsR-family protein [Mycobacterium
tuberculosis KZN V2475]
gi|13880119|gb|AAK44828.1| transcriptional regulator, ArsR family [Mycobacterium tuberculosis
CDC1551]
gi|148720304|gb|ABR04929.1| hypothetical transcriptional regulatory protein, arsR-family
[Mycobacterium tuberculosis F11]
gi|253319012|gb|ACT23615.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
KZN 1435]
gi|308216785|gb|EFO76184.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu001]
gi|308335787|gb|EFP24638.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu004]
gi|308351076|gb|EFP39927.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
SUMu008]
Length=437
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/434 (100%), Positives = 434/434 (100%), Gaps = 0/434 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER
Sbjct 4 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 63
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 64 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 123
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 124 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 183
Query 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE
Sbjct 184 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 243
Query 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA
Sbjct 244 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 303
Query 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 360
AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL
Sbjct 304 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 363
Query 361 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 420
VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA
Sbjct 364 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 423
Query 421 FTGRQPTAGHVSAT 434
FTGRQPTAGHVSAT
Sbjct 424 FTGRQPTAGHVSAT 437
>gi|31791758|ref|NP_854251.1| ArsR family transcriptional regulator [Mycobacterium bovis AF2122/97]
gi|121636494|ref|YP_976717.1| ArsR family transcriptional regulator [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224988966|ref|YP_002643653.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
14 more sequence titles
Length=434
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/434 (99%), Positives = 433/434 (99%), Gaps = 0/434 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER
Sbjct 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
Query 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQ GDAGPDE
Sbjct 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQHGDAGPDE 240
Query 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA
Sbjct 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
Query 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 360
AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL
Sbjct 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 360
Query 361 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 420
VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA
Sbjct 361 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 420
Query 421 FTGRQPTAGHVSAT 434
FTGRQPTAGHVSAT
Sbjct 421 FTGRQPTAGHVSAT 434
>gi|289744289|ref|ZP_06503667.1| transcriptional regulator [Mycobacterium tuberculosis 02_1987]
gi|294996088|ref|ZP_06801779.1| transcriptional regulator, arsR-family protein [Mycobacterium
tuberculosis 210]
gi|289684817|gb|EFD52305.1| transcriptional regulator [Mycobacterium tuberculosis 02_1987]
Length=437
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/434 (99%), Positives = 433/434 (99%), Gaps = 0/434 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER
Sbjct 4 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 63
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 64 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 123
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 124 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 183
Query 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQ GDAGPDE
Sbjct 184 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQHGDAGPDE 243
Query 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA
Sbjct 244 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 303
Query 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 360
AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL
Sbjct 304 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 363
Query 361 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 420
VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA
Sbjct 364 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 423
Query 421 FTGRQPTAGHVSAT 434
FTGRQPTAGHVSAT
Sbjct 424 FTGRQPTAGHVSAT 437
>gi|298524064|ref|ZP_07011473.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493858|gb|EFI29152.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=439
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/431 (99%), Positives = 430/431 (99%), Gaps = 0/431 (0%)
Query 4 VAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRERYYR 63
VAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRERYYR
Sbjct 9 VAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRERYYR 68
Query 64 LDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFALIT 123
LDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFALIT
Sbjct 69 LDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFALIT 128
Query 124 QPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGDPPP 183
QPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGDPPP
Sbjct 129 QPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGDPPP 188
Query 184 GGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDEWAA 243
GGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQ GDAGPDEWAA
Sbjct 189 GGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQHGDAGPDEWAA 248
Query 244 APDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAG 303
APDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAG
Sbjct 249 APDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAG 308
Query 304 AQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHA 363
AQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHA
Sbjct 309 AQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHA 368
Query 364 WDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTG 423
WDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTG
Sbjct 369 WDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTG 428
Query 424 RQPTAGHVSAT 434
RQPTAGHVSAT
Sbjct 429 RQPTAGHVSAT 439
>gi|340625607|ref|YP_004744059.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|340003797|emb|CCC42923.1| putative transcriptional regulatory protein (possibly ARSR-family)
[Mycobacterium canettii CIPT 140010059]
Length=434
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/434 (99%), Positives = 430/434 (99%), Gaps = 0/434 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLA AGLVTARKQGRER
Sbjct 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAGAGLVTARKQGRER 60
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LIT+PDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 121 LITRPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
Query 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQ GDAGPDE
Sbjct 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQHGDAGPDE 240
Query 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA
Sbjct 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
Query 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 360
AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNS+QVPATVPVGILCLEFL
Sbjct 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSDQVPATVPVGILCLEFL 360
Query 361 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 420
VHAWDFA ATGSQVI +EPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA
Sbjct 361 VHAWDFATATGSQVIVAEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIA 420
Query 421 FTGRQPTAGHVSAT 434
FTGRQPTAGHVSAT
Sbjct 421 FTGRQPTAGHVSAT 434
>gi|339293619|gb|AEJ45730.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
CCDC5079]
Length=397
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/396 (99%), Positives = 393/396 (99%), Gaps = 0/396 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER
Sbjct 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
Query 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQ GDAGPDE
Sbjct 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQHGDAGPDE 240
Query 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA
Sbjct 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
Query 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 360
AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL
Sbjct 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFL 360
Query 361 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPAT 396
VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITP
Sbjct 361 VHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPGN 396
>gi|289749073|ref|ZP_06508451.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
T92]
gi|289689660|gb|EFD57089.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
T92]
Length=354
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/351 (99%), Positives = 350/351 (99%), Gaps = 0/351 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER
Sbjct 4 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 63
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 64 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 123
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 124 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 183
Query 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQ GDAGPDE
Sbjct 184 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQHGDAGPDE 243
Query 241 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 300
WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA
Sbjct 244 WAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA 303
Query 301 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVP 351
AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVP
Sbjct 304 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVP 354
>gi|289568507|ref|ZP_06448734.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
T17]
gi|289542261|gb|EFD45909.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
T17]
Length=269
Score = 537 bits (1383), Expect = 2e-150, Method: Compositional matrix adjust.
Identities = 265/266 (99%), Positives = 265/266 (99%), Gaps = 0/266 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER
Sbjct 4 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 63
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 64 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 123
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 124 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 183
Query 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQ GDAGPDE
Sbjct 184 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQHGDAGPDE 243
Query 241 WAAAPDPLDELSCAEATLAVLQHVLR 266
WAAAPDPLDELSCAEATLAVLQHVLR
Sbjct 244 WAAAPDPLDELSCAEATLAVLQHVLR 269
>gi|183980963|ref|YP_001849254.1| transcriptional regulator [Mycobacterium marinum M]
gi|183174289|gb|ACC39399.1| transcriptional regulator [Mycobacterium marinum M]
Length=340
Score = 502 bits (1292), Expect = 5e-140, Method: Compositional matrix adjust.
Identities = 240/324 (75%), Positives = 277/324 (86%), Gaps = 0/324 (0%)
Query 103 MPFEKAVVVPLDPTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVID 162
MP E AVV+P++P +FAL T+P+ LRRWMA+ ARIE G YRWTVTPGH+A G V++
Sbjct 1 MPLENAVVLPVNPAQSFALFTRPEGLRRWMAITARIEPYDAGVYRWTVTPGHTAVGAVVE 60
Query 163 VDPGKRVVFTWGWEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNH 222
DPG+R+V +WGWE HGDP PG STVT+TL P GTE+RLVH+GLT QQAARHA+GW+H
Sbjct 61 ADPGRRLVLSWGWEGHGDPAPGESTVTVTLAPAPDGTEIRLVHEGLTEQQAARHAEGWSH 120
Query 223 FLDRLVVAGQRGDAGPDEWAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEY 282
+LDRLV A +GDAGPDEWAA PDPLDELSCAEATLAV+QHVLR + +DL RQTPC++Y
Sbjct 121 YLDRLVAAALQGDAGPDEWAAVPDPLDELSCAEATLAVVQHVLRALEPADLARQTPCSQY 180
Query 283 DVSQLADHLLRSLAIIGAAAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELN 342
DV QLADHL+RSL IIG+AAGAQL PRD+DAPLETQVADA QAV+EAWRRRG+ GTVELN
Sbjct 181 DVVQLADHLMRSLTIIGSAAGAQLPPRDLDAPLETQVADAGQAVLEAWRRRGVDGTVELN 240
Query 343 SNQVPATVPVGILCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGF 402
+NQVPA VPVGILCLE LVHAWDFA AT +V+ S+ V+EYVL VAGKVITPA RNSAGF
Sbjct 241 ANQVPAAVPVGILCLELLVHAWDFAFATDRRVVVSDTVTEYVLTVAGKVITPAARNSAGF 300
Query 403 AAPAAVGSFAPVLDRLIAFTGRQP 426
AAP AVG+FAPVLDRLIAFTGR+P
Sbjct 301 AAPVAVGAFAPVLDRLIAFTGRRP 324
>gi|118616490|ref|YP_904822.1| transcriptional regulator [Mycobacterium ulcerans Agy99]
gi|118568600|gb|ABL03351.1| transcriptional regulator [Mycobacterium ulcerans Agy99]
Length=368
Score = 502 bits (1292), Expect = 6e-140, Method: Compositional matrix adjust.
Identities = 241/328 (74%), Positives = 277/328 (85%), Gaps = 0/328 (0%)
Query 99 GDCAMPFEKAVVVPLDPTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAG 158
G+ AMP E AVV+P+DP +FAL T+P+ LRRWMA+ ARIE G YRWTVTPGH+A G
Sbjct 25 GERAMPLENAVVLPVDPAQSFALFTRPEGLRRWMAITARIEPYDAGVYRWTVTPGHTAVG 84
Query 159 TVIDVDPGKRVVFTWGWEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAK 218
V++ DPG+R+V +WGWE HGDP PG STVT+TL P GTE+RLVH+GLT QQAARHA+
Sbjct 85 AVVEADPGQRLVLSWGWEGHGDPAPGESTVTVTLAPAPDGTEIRLVHEGLTEQQAARHAE 144
Query 219 GWNHFLDRLVVAGQRGDAGPDEWAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTP 278
GW+H+LDRLV A +GDAGPDEW A P PLDELSCAEATLAV+QHVLR + +DL RQTP
Sbjct 145 GWSHYLDRLVAAALQGDAGPDEWGAVPGPLDELSCAEATLAVVQHVLRALEPADLARQTP 204
Query 279 CTEYDVSQLADHLLRSLAIIGAAAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGT 338
C++YDV QLADHL+RSL IIG AAGAQL PRD+DAPLETQVADA QAV+EAWRRRG+ GT
Sbjct 205 CSQYDVVQLADHLMRSLTIIGGAAGAQLPPRDLDAPLETQVADAGQAVLEAWRRRGVDGT 264
Query 339 VELNSNQVPATVPVGILCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRN 398
VELN+NQVPA VPVGILCLE LVHAWDFA AT +V+ S+ V+EYVL VAGKVITPA RN
Sbjct 265 VELNANQVPAAVPVGILCLELLVHAWDFAFATDRRVVVSDTVTEYVLTVAGKVITPAARN 324
Query 399 SAGFAAPAAVGSFAPVLDRLIAFTGRQP 426
SAGFAAP AVG+FAPVLDRLIAFTGR+P
Sbjct 325 SAGFAAPVAVGAFAPVLDRLIAFTGRRP 352
>gi|308375201|ref|ZP_07667963.1| hypothetical protein TMGG_03591 [Mycobacterium tuberculosis SUMu007]
gi|308379819|ref|ZP_07669053.1| hypothetical protein TMKG_02914 [Mycobacterium tuberculosis SUMu011]
gi|308347162|gb|EFP36013.1| hypothetical protein TMGG_03591 [Mycobacterium tuberculosis SUMu007]
gi|308363595|gb|EFP52446.1| hypothetical protein TMKG_02914 [Mycobacterium tuberculosis SUMu011]
Length=247
Score = 488 bits (1257), Expect = 7e-136, Method: Compositional matrix adjust.
Identities = 246/247 (99%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 188 VTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDEWAAAPDP 247
+TITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDEWAAAPDP
Sbjct 1 MTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDEWAAAPDP 60
Query 248 LDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLA 307
LDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLA
Sbjct 61 LDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLA 120
Query 308 PRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFA 367
PRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFA
Sbjct 121 PRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFA 180
Query 368 IATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQPT 427
IATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQPT
Sbjct 181 IATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQPT 240
Query 428 AGHVSAT 434
AGHVSAT
Sbjct 241 AGHVSAT 247
>gi|289441962|ref|ZP_06431706.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
T46]
gi|289414881|gb|EFD12121.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis
T46]
Length=269
Score = 486 bits (1251), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 241/246 (98%), Positives = 242/246 (99%), Gaps = 1/246 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER
Sbjct 4 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 63
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 64 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 123
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 124 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 183
Query 181 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDE 240
PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRL + Q GDAGPDE
Sbjct 184 PPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRL-SSRQHGDAGPDE 242
Query 241 WAAAPD 246
WAAAPD
Sbjct 243 WAAAPD 248
>gi|289446124|ref|ZP_06435868.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
CPHL_A]
gi|289419082|gb|EFD16283.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis
CPHL_A]
Length=247
Score = 486 bits (1251), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 245/247 (99%), Positives = 246/247 (99%), Gaps = 0/247 (0%)
Query 188 VTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDEWAAAPDP 247
+TITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQ GDAGPDEWAAAPDP
Sbjct 1 MTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQHGDAGPDEWAAAPDP 60
Query 248 LDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLA 307
LDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLA
Sbjct 61 LDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLA 120
Query 308 PRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFA 367
PRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFA
Sbjct 121 PRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFA 180
Query 368 IATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQPT 427
IATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQPT
Sbjct 181 IATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQPT 240
Query 428 AGHVSAT 434
AGHVSAT
Sbjct 241 AGHVSAT 247
>gi|226363409|ref|YP_002781191.1| hypothetical protein ROP_39990 [Rhodococcus opacus B4]
gi|226241898|dbj|BAH52246.1| hypothetical protein [Rhodococcus opacus B4]
Length=327
Score = 420 bits (1080), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 208/324 (65%), Positives = 247/324 (77%), Gaps = 1/324 (0%)
Query 103 MPFEKAVVVPLDPTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVID 162
MPF+K VVVPLDP +TF L+T+PDRLRRW VAAR++L+ GG YRWTV PGHSAAGT +
Sbjct 1 MPFDKTVVVPLDPDATFDLVTRPDRLRRWQTVAARVDLQAGGEYRWTVVPGHSAAGTFRE 60
Query 163 VDPGKRVVFTWGWEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNH 222
V PGKRVVFTWGWE + PPG STVT+TLTP GGTEVRLVHDGL +QAARHA+GWNH
Sbjct 61 VVPGKRVVFTWGWEGDEELPPGSSTVTVTLTPAAGGTEVRLVHDGLNTEQAARHAEGWNH 120
Query 223 FLDRLVVAGQRGDAGPDEWAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEY 282
+LDRLV A Q DAGPD+WAAAPDPLDELS AEATLA++Q VLRG+ A D++RQT CTE+
Sbjct 121 YLDRLVGAAQTSDAGPDDWAAAPDPLDELSSAEATLAIVQRVLRGVTADDMSRQTACTEF 180
Query 283 DVSQLADHLLRSLAIIGAAAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELN 342
VSQLADHL S+ +G AAGA D P+E ++AD AQ +EAWR RGL GTV +
Sbjct 181 TVSQLADHLAGSITALGGAAGATFD-DDPGKPVEARIADLAQPALEAWRSRGLDGTVTIG 239
Query 343 SNQVPATVPVGILCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGF 402
N +PATV GIL +EFLVHAWDFA ATG++V SEP++EYVLA+ K+ITP R + GF
Sbjct 240 PNDIPATVATGILSIEFLVHAWDFAAATGAEVAVSEPLAEYVLALTHKIITPEGRKAVGF 299
Query 403 AAPAAVGSFAPVLDRLIAFTGRQP 426
P + + RLIA+TGR P
Sbjct 300 DDPVPAPHTSDAVTRLIAYTGRHP 323
>gi|111021105|ref|YP_704077.1| hypothetical protein RHA1_ro04123 [Rhodococcus jostii RHA1]
gi|110820635|gb|ABG95919.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=327
Score = 413 bits (1062), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 202/324 (63%), Positives = 246/324 (76%), Gaps = 1/324 (0%)
Query 103 MPFEKAVVVPLDPTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVID 162
MPF+K VVVPLDP +TF L+T+P+RLRRW VAAR++L+ GG YRWTV PGHSAAGT +
Sbjct 1 MPFDKTVVVPLDPDATFDLVTRPERLRRWQTVAARVDLQAGGEYRWTVVPGHSAAGTFRE 60
Query 163 VDPGKRVVFTWGWEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNH 222
V PGKRVV+TWGWE + PPG STVT+TLTP GGTEVRLVHDGLT +QA RHA+GWNH
Sbjct 61 VVPGKRVVYTWGWEGDDELPPGSSTVTVTLTPTAGGTEVRLVHDGLTDEQAVRHAEGWNH 120
Query 223 FLDRLVVAGQRGDAGPDEWAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEY 282
+LDRLV A Q+ DAGPDEWAA PDPLDELS AEATLAV+Q VLR + A+D+++QT C E+
Sbjct 121 YLDRLVAAAQKSDAGPDEWAAVPDPLDELSSAEATLAVVQRVLRDVTAADMSKQTACAEF 180
Query 283 DVSQLADHLLRSLAIIGAAAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELN 342
VSQLADHL+ S+ +G AAGA D P+E ++AD AQ +EAWR RGL GTV +
Sbjct 181 TVSQLADHLVGSITALGGAAGATFE-DDPGKPVEARIADLAQPALEAWRSRGLDGTVTIG 239
Query 343 SNQVPATVPVGILCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGF 402
+N PATV GIL +EFLVHAWDFA+A G +V SEP++EYVL++ K+ITP R GF
Sbjct 240 TNHPPATVAAGILSIEFLVHAWDFAVAIGGEVAVSEPLAEYVLSLTHKIITPEGRKVVGF 299
Query 403 AAPAAVGSFAPVLDRLIAFTGRQP 426
P + + RLIA+TGR+P
Sbjct 300 DDPVPAPHTSDAVTRLIAYTGRRP 323
>gi|308375200|ref|ZP_07667962.1| putative transcriptional regulator, ArsR family [Mycobacterium
tuberculosis SUMu007]
gi|308379818|ref|ZP_07669052.1| putative transcriptional regulator, ArsR family [Mycobacterium
tuberculosis SUMu011]
gi|308347161|gb|EFP36012.1| putative transcriptional regulator, ArsR family [Mycobacterium
tuberculosis SUMu007]
gi|308363594|gb|EFP52445.1| putative transcriptional regulator, ArsR family [Mycobacterium
tuberculosis SUMu011]
Length=187
Score = 370 bits (949), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 182/185 (99%), Positives = 182/185 (99%), Gaps = 0/185 (0%)
Query 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER
Sbjct 1 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRER 60
Query 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA
Sbjct 61 YYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFA 120
Query 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD
Sbjct 121 LITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGD 180
Query 181 PPPGG 185
P G
Sbjct 181 PRRAG 185
>gi|108801947|ref|YP_642144.1| hypothetical protein Mmcs_4984 [Mycobacterium sp. MCS]
gi|119871099|ref|YP_941051.1| hypothetical protein Mkms_5072 [Mycobacterium sp. KMS]
gi|126437928|ref|YP_001073619.1| hypothetical protein Mjls_5365 [Mycobacterium sp. JLS]
gi|108772366|gb|ABG11088.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119697188|gb|ABL94261.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237728|gb|ABO01129.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=194
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/179 (52%), Positives = 122/179 (69%), Gaps = 0/179 (0%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL AE +L VL V+R I DL +QTPC+E+DV+ L +HL+RS+ I+G AAGA++
Sbjct 13 PTDELRSAELSLGVLHQVVRSIAEDDLGKQTPCSEFDVAGLTEHLVRSITILGGAAGAEM 72
Query 307 APRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDF 366
RD +E QV AA+ ++AW RRG+ G V++ +PATV VGIL LEFLVHAWD+
Sbjct 73 PERDPSDSVERQVILAARPALDAWHRRGIDGAVDVGGTTMPATVLVGILSLEFLVHAWDY 132
Query 367 AIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQ 425
A A G V A + +S+YVLA+A K++TP R AGF P V AP L RL+AFTGR+
Sbjct 133 ATAIGHTVPAPDSLSDYVLAMAEKIVTPQGRARAGFDDPVEVPDDAPPLQRLLAFTGRR 191
>gi|296166899|ref|ZP_06849316.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897776|gb|EFG77365.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=197
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/180 (50%), Positives = 115/180 (64%), Gaps = 0/180 (0%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL AE TL VLQ VL I A DL+R TPC E+DV+QL DHLL+S+ +G GAQ+
Sbjct 16 PTDELHSAEDTLGVLQRVLHPIAADDLSRPTPCAEFDVAQLTDHLLKSITALGGMVGAQI 75
Query 307 APRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDF 366
RD +E QV AA+ ++AW R GL G+V ++PA +L +EFLVHAWD+
Sbjct 76 PERDAGDSVEAQVVTAARPALDAWHRHGLDGSVPFGKGEMPAKGACAVLSIEFLVHAWDY 135
Query 367 AIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQP 426
A A G ++ A P+SEYVL +A +VI P R AGFA P V A L++L+AF+GR P
Sbjct 136 ATAVGHEINAPVPLSEYVLGLARQVIRPEFRGGAGFADPVDVPEDAGALEQLVAFSGRNP 195
>gi|342860029|ref|ZP_08716681.1| hypothetical protein MCOL_14160 [Mycobacterium colombiense CECT
3035]
gi|342132407|gb|EGT85636.1| hypothetical protein MCOL_14160 [Mycobacterium colombiense CECT
3035]
Length=194
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/180 (50%), Positives = 115/180 (64%), Gaps = 0/180 (0%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL AE TL VLQ VL I A DL+R+TPC ++DVS L HLL S++ +G GAQ+
Sbjct 13 PTDELHSAEDTLGVLQRVLHTIAADDLSRRTPCAQFDVSALTGHLLNSISALGGMVGAQI 72
Query 307 APRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDF 366
PR+ +E QV AA+ ++AW R GL G+V ++PA GIL +EFLVHAWD+
Sbjct 73 PPREEGDSVERQVIAAARPALDAWHRHGLDGSVPFGKGEMPAKSACGILSIEFLVHAWDY 132
Query 367 AIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQP 426
A A G + A EP+SEYVL +A + I P R AGF P V + A L++L+AFTGR P
Sbjct 133 AAAVGHDIHAPEPLSEYVLGLARQTIRPELRGQAGFDDPVEVPADAGALEQLVAFTGRNP 192
>gi|306786689|ref|ZP_07425011.1| hypothetical protein TMCG_01279 [Mycobacterium tuberculosis SUMu003]
gi|306805621|ref|ZP_07442289.1| hypothetical protein TMGG_01318 [Mycobacterium tuberculosis SUMu007]
gi|308232564|ref|ZP_07416472.2| hypothetical protein TMAG_00265 [Mycobacterium tuberculosis SUMu001]
22 more sequence titles
Length=197
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/192 (48%), Positives = 123/192 (65%), Gaps = 4/192 (2%)
Query 238 PDEWAAAPD--PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSL 295
P E PD P DEL+CAEA L VLQ VL IG D +QTPC YDV +L +HLL S+
Sbjct 5 PPESRPGPDSPPTDELACAEAALQVLQQVLHTIGRQDKAKQTPCPGYDVKKLTEHLLNSI 64
Query 296 AIIGAAAGAQLAPR-DVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGI 354
++G GA+ + R D+D+ +E V+ AA++ ++AW R GL G V L + A V V +
Sbjct 65 MVLGGMVGAEFSLRADIDS-VERLVSGAARSALDAWHRHGLEGDVSLGPGSMSAKVAVSV 123
Query 355 LCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPV 414
+EFLVHAWD+A+A GS++ A++ ++EYVL +A K+I P R+ AGF P V
Sbjct 124 FSVEFLVHAWDYAVAVGSELKAADSLAEYVLELARKLIKPEERSVAGFNEPVDVPEDGGA 183
Query 415 LDRLIAFTGRQP 426
L+RLIAFTGR P
Sbjct 184 LERLIAFTGRNP 195
>gi|15610909|ref|NP_218290.1| hypothetical protein Rv3773c [Mycobacterium tuberculosis H37Rv]
gi|15843396|ref|NP_338433.1| hypothetical protein MT3882 [Mycobacterium tuberculosis CDC1551]
gi|148663641|ref|YP_001285164.1| hypothetical protein MRA_3813 [Mycobacterium tuberculosis H37Ra]
33 more sequence titles
Length=194
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/192 (48%), Positives = 123/192 (65%), Gaps = 4/192 (2%)
Query 238 PDEWAAAPD--PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSL 295
P E PD P DEL+CAEA L VLQ VL IG D +QTPC YDV +L +HLL S+
Sbjct 2 PPESRPGPDSPPTDELACAEAALQVLQQVLHTIGRQDKAKQTPCPGYDVKKLTEHLLNSI 61
Query 296 AIIGAAAGAQLAPR-DVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGI 354
++G GA+ + R D+D+ +E V+ AA++ ++AW R GL G V L + A V V +
Sbjct 62 MVLGGMVGAEFSLRADIDS-VERLVSGAARSALDAWHRHGLEGDVSLGPGSMSAKVAVSV 120
Query 355 LCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPV 414
+EFLVHAWD+A+A GS++ A++ ++EYVL +A K+I P R+ AGF P V
Sbjct 121 FSVEFLVHAWDYAVAVGSELKAADSLAEYVLELARKLIKPEERSVAGFNEPVDVPEDGGA 180
Query 415 LDRLIAFTGRQP 426
L+RLIAFTGR P
Sbjct 181 LERLIAFTGRNP 192
>gi|254552889|ref|ZP_05143336.1| hypothetical protein Mtube_20997 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289763957|ref|ZP_06523335.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289711463|gb|EFD75479.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=194
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/192 (48%), Positives = 123/192 (65%), Gaps = 4/192 (2%)
Query 238 PDEWAAAPD--PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSL 295
P E PD P DEL+CAEA L VLQ VL IG D +QTPC YDV +L +HLL S+
Sbjct 2 PPESRPGPDSPPTDELACAEAALQVLQQVLHTIGRQDKAKQTPCPGYDVKKLTEHLLNSI 61
Query 296 AIIGAAAGAQLAPR-DVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGI 354
++G GA+ + R D+D+ +E V+ AA++ ++AW R GL G V L + A V V +
Sbjct 62 MVLGGMVGAEFSLRADIDS-VERLVSGAARSALDAWHRHGLEGDVSLGPGSMSAKVAVSV 120
Query 355 LCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPV 414
+EFLVHAWD+A+A GS++ A++ ++EYVL +A K+I P R+ AGF P V
Sbjct 121 FSVEFLVHAWDYAVAVGSELKAADSLAEYVLELARKLIRPEERSVAGFNEPVDVPEDGGA 180
Query 415 LDRLIAFTGRQP 426
L+RLIAFTGR P
Sbjct 181 LERLIAFTGRNP 192
>gi|340628743|ref|YP_004747195.1| hypothetical protein MCAN_37931 [Mycobacterium canettii CIPT
140010059]
gi|340006933|emb|CCC46124.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=194
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/192 (48%), Positives = 123/192 (65%), Gaps = 4/192 (2%)
Query 238 PDEWAAAPD--PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSL 295
P E PD P DEL+CAEA L VLQ VL IG D +QTPC YDV +L +HLL S+
Sbjct 2 PPESRPGPDSPPTDELACAEAALQVLQQVLYTIGRQDKAKQTPCPGYDVKKLTEHLLNSI 61
Query 296 AIIGAAAGAQLAPR-DVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGI 354
++G GA+ + R D+D+ +E V+ AA++ ++AW R GL G V L + A V V +
Sbjct 62 MVLGGMVGAEFSLRADIDS-VERLVSVAARSALDAWHRHGLEGDVSLGPGSMSAKVAVSV 120
Query 355 LCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPV 414
+EFLVHAWD+A+A GS++ A++ ++EYVL +A K+I P R+ AGF P V
Sbjct 121 FSVEFLVHAWDYAVAVGSELKAADSLAEYVLELARKLIKPEERSVAGFNEPVDVPEDGGA 180
Query 415 LDRLIAFTGRQP 426
L+RLIAFTGR P
Sbjct 181 LERLIAFTGRNP 192
>gi|183985296|ref|YP_001853587.1| hypothetical protein MMAR_5328 [Mycobacterium marinum M]
gi|183178622|gb|ACC43732.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=194
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/180 (49%), Positives = 110/180 (62%), Gaps = 0/180 (0%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL+ AE LAVLQ VL IG DL R TPC EYDVS L HLL S+ ++G AGA+
Sbjct 13 PTDELASAERALAVLQQVLHPIGDGDLFRPTPCPEYDVSGLTGHLLNSIVVLGGMAGAEF 72
Query 307 APRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDF 366
RD + E QV AA+ ++AW RRG+ G V L +PA V V + +EFLVHAWD+
Sbjct 73 TMRDHTSSAEGQVVSAARPALDAWHRRGMEGDVPLGPASMPARVAVSVFSIEFLVHAWDY 132
Query 367 AIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQP 426
A A G + + +++YVL +A +I P R +AGF P VG L RL+AFTGR P
Sbjct 133 ATAVGHDIHVPDSLADYVLGLAQNLIQPHERGAAGFDDPVQVGDDVSGLHRLVAFTGRNP 192
>gi|289759939|ref|ZP_06519317.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289715503|gb|EFD79515.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|326905613|gb|EGE52546.1| hypothetical protein TBPG_03570 [Mycobacterium tuberculosis W-148]
gi|339300178|gb|AEJ52288.1| hypothetical protein CCDC5180_3451 [Mycobacterium tuberculosis
CCDC5180]
Length=194
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/192 (47%), Positives = 122/192 (64%), Gaps = 4/192 (2%)
Query 238 PDEWAAAPD--PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSL 295
P E PD P DEL+CAEA L VLQ VL IG D +QTPC YDV +L +HLL S+
Sbjct 2 PPESRPGPDSPPTDELACAEAALQVLQQVLHTIGRQDKAKQTPCPGYDVKKLTEHLLNSI 61
Query 296 AIIGAAAGAQLAPR-DVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGI 354
++G GA+ + R D+D+ +E V+ AA++ ++AW R GL G V L + A V V +
Sbjct 62 MVLGGMVGAEFSLRADIDS-VERLVSGAARSALDAWHRHGLEGDVSLGPGSMSAKVAVSV 120
Query 355 LCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPV 414
+EFLVHAWD+A+A S++ A++ ++EYVL +A K+I P R+ AGF P V
Sbjct 121 FSVEFLVHAWDYAVAVVSELKAADSLAEYVLELARKLIKPEERSVAGFNEPVDVPEDGGA 180
Query 415 LDRLIAFTGRQP 426
L+RLIAFTGR P
Sbjct 181 LERLIAFTGRNP 192
>gi|240168540|ref|ZP_04747199.1| hypothetical protein MkanA1_04457 [Mycobacterium kansasii ATCC
12478]
Length=194
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/180 (48%), Positives = 112/180 (63%), Gaps = 0/180 (0%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL AEA+L VLQ VL I A D +QTPCTEYDV L HLL S+ ++G GA+
Sbjct 13 PTDELQSAEASLGVLQQVLHTIAADDRAKQTPCTEYDVKGLTGHLLNSIMVLGGMVGAEF 72
Query 307 APRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDF 366
+ R+ +E V AA+ ++AW R GL G V L + A V V + +EFLVHAWD+
Sbjct 73 SMREDTDSVERLVIGAARPALDAWHRHGLDGEVSLGPGSMSARVAVSVFSIEFLVHAWDY 132
Query 367 AIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQP 426
A A GS V ++ ++EYVL +A +I P R++AGF AP + A LDRL+AFTGR P
Sbjct 133 ATAVGSDVRVADSLAEYVLELARTLIKPHERSAAGFDAPVELPDHASALDRLVAFTGRNP 192
>gi|294995313|ref|ZP_06801004.1| hypothetical protein Mtub2_12583 [Mycobacterium tuberculosis
210]
gi|339296579|gb|AEJ48690.1| hypothetical protein CCDC5079_3501 [Mycobacterium tuberculosis
CCDC5079]
Length=197
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/192 (47%), Positives = 122/192 (64%), Gaps = 4/192 (2%)
Query 238 PDEWAAAPD--PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSL 295
P E PD P DEL+CAEA L VLQ VL IG D +QTPC YDV +L +HLL S+
Sbjct 5 PPESRPGPDSPPTDELACAEAALQVLQQVLHTIGRQDKAKQTPCPGYDVKKLTEHLLNSI 64
Query 296 AIIGAAAGAQLAPR-DVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGI 354
++G GA+ + R D+D+ +E V+ AA++ ++AW R GL G V L + A V V +
Sbjct 65 MVLGGMVGAEFSLRADIDS-VERLVSGAARSALDAWHRHGLEGDVSLGPGSMSAKVAVSV 123
Query 355 LCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPV 414
+EFLVHAWD+A+A S++ A++ ++EYVL +A K+I P R+ AGF P V
Sbjct 124 FSVEFLVHAWDYAVAVVSELKAADSLAEYVLELARKLIKPEERSVAGFNEPVDVPEDGGA 183
Query 415 LDRLIAFTGRQP 426
L+RLIAFTGR P
Sbjct 184 LERLIAFTGRNP 195
>gi|333992695|ref|YP_004525309.1| hypothetical protein JDM601_4055 [Mycobacterium sp. JDM601]
gi|333488663|gb|AEF38055.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=166
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/165 (53%), Positives = 112/165 (68%), Gaps = 0/165 (0%)
Query 260 VLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLAPRDVDAPLETQV 319
+L VL I + +L+ QTPC+E+DV+QL +HLL S++++GAAAGA+ RD E QV
Sbjct 1 MLVQVLHHISSDELSNQTPCSEFDVAQLTEHLLGSISMLGAAAGAEFPDRDATESPERQV 60
Query 320 ADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFAIATGSQVIASEP 379
AA+ ++AW RGL GTV + NQ+PAT+ GIL +EFLVHAWD+A A G V +EP
Sbjct 61 IAAARPALDAWHGRGLDGTVAIGPNQLPATMVAGILAVEFLVHAWDYATAIGRTVQVAEP 120
Query 380 VSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGR 424
++EYVL +A +ITP R AGF P V AP L RLIAFTGR
Sbjct 121 LAEYVLGLAQAIITPEGRVRAGFDQPVEVAGTAPALQRLIAFTGR 165
>gi|118619540|ref|YP_907872.1| hypothetical protein MUL_4409 [Mycobacterium ulcerans Agy99]
gi|118571650|gb|ABL06401.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=194
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/180 (48%), Positives = 109/180 (61%), Gaps = 0/180 (0%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL+ AE LAVLQ VL IG DL R TPC EYDVS L HLL S+ ++ AGA+
Sbjct 13 PTDELASAERALAVLQQVLHPIGDGDLFRPTPCPEYDVSGLTGHLLNSIVVLDGMAGAEF 72
Query 307 APRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDF 366
RD + E QV AA+ ++AW RRG+ G V L +PA V V + +EFLVHAWD+
Sbjct 73 TMRDHTSTPEGQVVSAARPALDAWHRRGMDGDVPLGPASMPARVAVSVFSIEFLVHAWDY 132
Query 367 AIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQP 426
A A G + + +++YVL +A +I P R +AGF P VG L RL+AFTGR P
Sbjct 133 ATAVGHDIHVPDSLADYVLGLAQNLIQPHERGAAGFDDPVQVGDDVRGLHRLVAFTGRNP 192
>gi|41406348|ref|NP_959184.1| hypothetical protein MAP0250 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394696|gb|AAS02567.1| hypothetical protein MAP_0250 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=195
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/182 (49%), Positives = 115/182 (64%), Gaps = 3/182 (1%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL AEA L V+Q VL I A D++R TPC ++DV++L DHLL+SL +G AGA +
Sbjct 13 PTDELDGAEAALRVMQQVLHPIAADDMSRPTPCAQFDVTRLTDHLLKSLEALGGMAGADV 72
Query 307 APRDVDA--PLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAW 364
P D+ +E QV A+ ++AWR+RGL GTV ++PA IL LE LVHAW
Sbjct 73 -PDHADSGDSVERQVIAVARPALDAWRQRGLDGTVSFGGGEMPARNACAILALELLVHAW 131
Query 365 DFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGR 424
D+A A G V A EP++EYVL +A +VI P R AGF P V + A L +L+AFTGR
Sbjct 132 DYARAVGRDVRAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADADALTKLVAFTGR 191
Query 425 QP 426
P
Sbjct 192 NP 193
>gi|336461601|gb|EGO40467.1| TIGR03086 family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=195
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/182 (49%), Positives = 115/182 (64%), Gaps = 3/182 (1%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL AEA L V+Q VL I A D++R TPC ++DV++L DHLL+SL +G AGA +
Sbjct 13 PTDELDGAEAALRVMQQVLHPIAADDMSRPTPCAQFDVTRLTDHLLKSLEALGGMAGADV 72
Query 307 APRDVDA--PLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAW 364
P D+ +E QV A+ ++AWR+RGL GTV ++PA IL LE LVHAW
Sbjct 73 -PDHADSGDSVERQVIAVARPALDAWRQRGLDGTVSFGGGEMPARNACAILALELLVHAW 131
Query 365 DFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGR 424
D+A A G V A EP++EYVL +A +VI P R AGF P V + A L +L+AFTGR
Sbjct 132 DYARAVGRDVRAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADADALTKLVAFTGR 191
Query 425 QP 426
P
Sbjct 192 NP 193
>gi|254822475|ref|ZP_05227476.1| hypothetical protein MintA_21251 [Mycobacterium intracellulare
ATCC 13950]
Length=194
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/181 (49%), Positives = 112/181 (62%), Gaps = 2/181 (1%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL AE TL VLQ VL I A DL+R TPC ++DV+QL HLL S+ +G A +
Sbjct 13 PTDELHSAEDTLGVLQRVLHTIAADDLSRPTPCADFDVAQLTGHLLNSIKALGGMVDADV 72
Query 307 -APRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWD 365
P + D+ +E QV AA+ ++AW R GL GTV ++PA +L +EFLVHAWD
Sbjct 73 PEPAEGDS-VERQVVAAARPALDAWHRHGLGGTVPFGKGEMPAKSACAVLSIEFLVHAWD 131
Query 366 FAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQ 425
+A AT +V A EP+SEYVL +A +I P R AGF P V A L++L+AFTGR
Sbjct 132 YAAATKREVDAPEPLSEYVLGLARHIIRPELRGGAGFDDPVDVPEDAGALEQLVAFTGRN 191
Query 426 P 426
P
Sbjct 192 P 192
>gi|118462650|ref|YP_879539.1| hypothetical protein MAV_0248 [Mycobacterium avium 104]
gi|118163937|gb|ABK64834.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=198
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/182 (48%), Positives = 112/182 (62%), Gaps = 3/182 (1%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL AEA L V+Q VL I A D+ R TPC ++DV++L DHLL+SL +G AGA
Sbjct 16 PTDELDGAEAALRVMQQVLHPIAADDMPRPTPCAQFDVTRLTDHLLKSLEALGGMAGADF 75
Query 307 APRDVDA--PLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAW 364
P D+ +E +V A+ ++AWR+RGL GTV ++PA IL LE LVHAW
Sbjct 76 -PDHADSADSVERRVIAVARPALDAWRQRGLDGTVSFGGGEMPARNACAILALELLVHAW 134
Query 365 DFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGR 424
D+A A G A EP++EYVL +A +VI P R AGF P V + A L +L+AFTGR
Sbjct 135 DYARAVGRDARAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADADALTKLVAFTGR 194
Query 425 QP 426
P
Sbjct 195 NP 196
>gi|254773305|ref|ZP_05214821.1| hypothetical protein MaviaA2_01286 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=191
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/182 (48%), Positives = 112/182 (62%), Gaps = 3/182 (1%)
Query 247 PLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQL 306
P DEL AEA L V+Q VL I A D+ R TPC ++DV++L DHLL+SL +G AGA
Sbjct 9 PTDELDGAEAALRVMQQVLHPIAADDMPRPTPCAQFDVTRLTDHLLKSLEALGGMAGADF 68
Query 307 APRDVDA--PLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAW 364
P D+ +E +V A+ ++AWR+RGL GTV ++PA IL LE LVHAW
Sbjct 69 -PDHADSADSVERRVIAVARPALDAWRQRGLDGTVSFGGGEMPARNACAILALELLVHAW 127
Query 365 DFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGR 424
D+A A G A EP++EYVL +A +VI P R AGF P V + A L +L+AFTGR
Sbjct 128 DYARAVGRDARAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADADALTKLVAFTGR 187
Query 425 QP 426
P
Sbjct 188 NP 189
>gi|298527247|ref|ZP_07014656.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497041|gb|EFI32335.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=169
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/168 (46%), Positives = 109/168 (65%), Gaps = 2/168 (1%)
Query 260 VLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLAPR-DVDAPLETQ 318
+LQ VL IG D +QTPC YDV +L +HLL S+ ++G GA+ + R D+D+ +E
Sbjct 1 MLQQVLHTIGRQDKAKQTPCPGYDVKKLTEHLLNSIMVLGGMVGAEFSLRADIDS-VERL 59
Query 319 VADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFAIATGSQVIASE 378
V+ AA++ ++AW R GL G V L + A V V + +EFLVHAWD+A+A GS++ A++
Sbjct 60 VSGAARSALDAWHRHGLEGDVSLGPGSMSAKVAVSVFSVEFLVHAWDYAVAVGSELKAAD 119
Query 379 PVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQP 426
++EYVL +A K+I P R+ AGF P V L+RLIAFTGR P
Sbjct 120 SLAEYVLELARKLIKPEERSVAGFNEPVDVPEDGGALERLIAFTGRNP 167
>gi|111021106|ref|YP_704078.1| ArsR family transcriptional regulator [Rhodococcus jostii RHA1]
gi|110820636|gb|ABG95920.1| possible transcriptional regulator, ArsR family protein [Rhodococcus
jostii RHA1]
Length=129
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 78/100 (78%), Gaps = 0/100 (0%)
Query 2 LEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRERY 61
LEVAAEPTRRRL+QLL GE+TV LA+ F +RSAISQHL +L EAGLVT RK GR RY
Sbjct 30 LEVAAEPTRRRLVQLLTSGEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRKDGRFRY 89
Query 62 YRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDC 101
YRLD +G+ +LRAL +SFW DELDRLVADA S+GD
Sbjct 90 YRLDPQGLAQLRALFDSFWIDELDRLVADATEEAASKGDS 129
>gi|215261454|pdb|3F6V|A Chain A, Crystal Structure Of Possible Transcriptional Regulator
For Arsenical Resistance
Length=151
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 78/100 (78%), Gaps = 0/100 (0%)
Query 2 LEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRERY 61
LEVAAEPTRRRL+QLL GE+TV LA+ F +RSAISQHL +L EAGLVT RK GR RY
Sbjct 52 LEVAAEPTRRRLVQLLTSGEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRKDGRFRY 111
Query 62 YRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDC 101
YRLD +G+ +LRAL +SFW DELDRLVADA S+GD
Sbjct 112 YRLDPQGLAQLRALFDSFWIDELDRLVADATEEAASKGDS 151
>gi|226363410|ref|YP_002781192.1| ArsR family transcriptional regulator [Rhodococcus opacus B4]
gi|226241899|dbj|BAH52247.1| putative ArsR family transcriptional regulator [Rhodococcus opacus
B4]
Length=104
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 78/100 (78%), Gaps = 0/100 (0%)
Query 2 LEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRERY 61
LEVAAEPTRRRL+QLL GE+TV LA+ F +RSAISQHL +L EAGLVTARK GR RY
Sbjct 5 LEVAAEPTRRRLMQLLTAGEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTARKDGRFRY 64
Query 62 YRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDC 101
YRLD +G+ +LR L ++FW DELDRLVADA S+GD
Sbjct 65 YRLDPQGLAQLRTLFDAFWIDELDRLVADATDEAGSKGDS 104
>gi|118468028|ref|YP_891036.1| hypothetical protein MSMEG_6832 [Mycobacterium smegmatis str.
MC2 155]
gi|118169315|gb|ABK70211.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=207
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/182 (41%), Positives = 113/182 (63%), Gaps = 3/182 (1%)
Query 248 LDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLA 307
+DELS A++ L+ L+ VL I D TPC +DV+ L +HL+ ++ ++GAAA A
Sbjct 16 MDELSSAQSALSALRPVLSAITPDDCGLPTPCAGFDVAALGEHLVGTVRMVGAAADAGFV 75
Query 308 PRDV---DAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAW 364
+V D +E +VA + +AV+ W+RRG AG V +PA + +G+L +E +VH W
Sbjct 76 RFEVVSHDDDIEARVAASTEAVIAVWQRRGTAGEVVFAGRVMPARLALGVLSVELVVHGW 135
Query 365 DFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGR 424
DFA A + + +++VLA+A +ITPA+R +AGF P +V + A LDRL+A+TGR
Sbjct 136 DFAQALHRPLGITAAHADFVLAMARHIITPASRETAGFDDPVSVAADAAALDRLVAYTGR 195
Query 425 QP 426
P
Sbjct 196 TP 197
>gi|169631520|ref|YP_001705169.1| hypothetical protein MAB_4446 [Mycobacterium abscessus ATCC 19977]
gi|169243487|emb|CAM64515.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=188
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/187 (41%), Positives = 107/187 (58%), Gaps = 12/187 (6%)
Query 244 APDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAG 303
A +PL+ ++ A A L V+ + +D +QTP ++ V+QL DHL S+ ++G AAG
Sbjct 4 ALNPLETVANARAAL---HEVVSRLTEADNDKQTPNAKFTVAQLTDHLQNSIKLLGGAAG 60
Query 304 AQLAPRDVDAPLETQVAD----AAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEF 359
D+ E VAD +QAV++AW+RRG+ GTV L + PA V V IL EF
Sbjct 61 V-----DIALTTEGSVADRLLPQSQAVVDAWQRRGIDGTVTLPIGEYPAEVAVRILGSEF 115
Query 360 LVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLI 419
LVHAWD+A+ATG + + +++ VL +I P R+ FA V +P L +LI
Sbjct 116 LVHAWDYAVATGQEFEPMDALTDGVLESVRMIIQPERRDGDFFADEVPVPDDSPNLVKLI 175
Query 420 AFTGRQP 426
AFTGR P
Sbjct 176 AFTGRNP 182
>gi|289755906|ref|ZP_06515284.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289696493|gb|EFD63922.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=138
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/137 (44%), Positives = 89/137 (65%), Gaps = 2/137 (1%)
Query 291 LLRSLAIIGAAAGAQLAPR-DVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPAT 349
+L S+ ++G GA+ + R D+D+ +E V+ AA++ ++AW R GL G V L + A
Sbjct 1 MLNSIMVLGGMVGAEFSLRADIDS-VERLVSGAARSALDAWHRHGLEGDVSLGPGSMSAK 59
Query 350 VPVGILCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVG 409
V V + +EFLVHAWD+A+A GS++ A++ ++EYVL +A K+I P R+ AGF P V
Sbjct 60 VAVSVFSVEFLVHAWDYAVAVGSELKAADSLAEYVLELARKLIKPEERSVAGFNEPVDVP 119
Query 410 SFAPVLDRLIAFTGRQP 426
L+RLIAFTGR P
Sbjct 120 EDGGALERLIAFTGRNP 136
>gi|328886074|emb|CCA59313.1| hypothetical protein SVEN_6027 [Streptomyces venezuelae ATCC
10712]
Length=158
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/132 (45%), Positives = 75/132 (57%), Gaps = 5/132 (3%)
Query 115 PTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWG 174
P + F +T ++ WM GG+YR TVT G+ AAG I VDP +RVVF+WG
Sbjct 21 PETVFGFLTDREKWLSWMGEDGSFAFEPGGSYRTTVTGGNVAAGRFITVDPHRRVVFSWG 80
Query 175 WED--HGDP--PPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAAR-HAKGWNHFLDRLVV 229
WE DP PPG STV ITL P GT +R++H GL +A HA+ W H++DRL
Sbjct 81 WESAPATDPPVPPGSSTVEITLEPTAEGTLLRMIHSGLPTTEACEAHAESWQHYVDRLAA 140
Query 230 AGQRGDAGPDEW 241
+ D GPD W
Sbjct 141 RAEGTDPGPDPW 152
>gi|31794945|ref|NP_857438.1| hypothetical protein Mb3801c [Mycobacterium bovis AF2122/97]
gi|121639689|ref|YP_979913.1| hypothetical protein BCG_3834c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224992185|ref|YP_002646874.1| hypothetical protein JTY_3836 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31620543|emb|CAD95987.1| CONSERVED HYPOTHETICAL PROTEIN [SECOND PART] [Mycobacterium bovis
AF2122/97]
gi|121495337|emb|CAL73824.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224775300|dbj|BAH28106.1| hypothetical protein JTY_3836 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341603710|emb|CCC66391.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=114
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/112 (47%), Positives = 73/112 (66%), Gaps = 0/112 (0%)
Query 315 LETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFAIATGSQV 374
+E V+ AA++ ++AW R GL G V L + A V V + +EFLVHAWD+A+A GS++
Sbjct 1 MERLVSGAARSALDAWHRHGLEGDVSLGPGSMSAKVAVSVFSVEFLVHAWDYAVAVGSEL 60
Query 375 IASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQP 426
A++ ++EYVL +A K+I P R+ AGF P V L+RLIAFTGR P
Sbjct 61 KAADSLAEYVLELARKLIKPEERSVAGFNEPVDVPEDGGALERLIAFTGRNP 112
>gi|116252894|ref|YP_768732.1| transcriptional regulator [Rhizobium leguminosarum bv. viciae
3841]
gi|115257542|emb|CAK08639.1| putative transcriptional regulator [Rhizobium leguminosarum bv.
viciae 3841]
Length=148
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/126 (43%), Positives = 74/126 (59%), Gaps = 1/126 (0%)
Query 115 PTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWG 174
P + FAL+T P+++ RWM A++E + GG Y VT A G+ +V P R+ +++G
Sbjct 17 PAAVFALMTDPEKILRWMGTEAQVEPQPGGLYLVNVTGARFARGSFREVVPVHRLAYSFG 76
Query 175 WEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGL-TAQQAARHAKGWNHFLDRLVVAGQR 233
W+ PPG S V I L GGT +RL H GL +A+Q A HA+GW H+L RL
Sbjct 77 WDGSEVVPPGSSLVEIDLIEQGGGTLLRLTHSGLPSAEQCAGHAEGWAHYLGRLTEVAAG 136
Query 234 GDAGPD 239
GD GPD
Sbjct 137 GDPGPD 142
>gi|150376025|ref|YP_001312621.1| activator of Hsp90 ATPase 1 family protein [Sinorhizobium medicae
WSM419]
gi|150030572|gb|ABR62688.1| Activator of Hsp90 ATPase 1 family protein [Sinorhizobium medicae
WSM419]
Length=149
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/128 (43%), Positives = 72/128 (57%), Gaps = 1/128 (0%)
Query 115 PTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWG 174
P + FAL+T P+++ RWM A +E + GG Y VT A G+ +V P R+ +++G
Sbjct 17 PAAVFALLTDPEKILRWMGTEAEVEPKPGGLYLVNVTGARFARGSFREVVPVHRLAYSFG 76
Query 175 WEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGL-TAQQAARHAKGWNHFLDRLVVAGQR 233
W+ PPG S V I L GT VRL H GL A+Q A H +GW H+LDRL A
Sbjct 77 WDGSDVVPPGSSLVEIDLVEEADGTLVRLTHSGLPDAEQCAGHVEGWAHYLDRLSAAAAG 136
Query 234 GDAGPDEW 241
D GPD W
Sbjct 137 RDPGPDPW 144
>gi|16263994|ref|NP_436786.1| hypothetical protein SM_b20256 [Sinorhizobium meliloti 1021]
gi|334319868|ref|YP_004556497.1| Activator of Hsp90 ATPase 1 family protein [Sinorhizobium meliloti
AK83]
gi|15140118|emb|CAC48646.1| HYPOTHETICAL PROTEIN SM_b20256 [Sinorhizobium meliloti 1021]
gi|333816029|gb|AEG08696.1| Activator of Hsp90 ATPase 1 family protein [Sinorhizobium meliloti
BL225C]
gi|334097607|gb|AEG55617.1| Activator of Hsp90 ATPase 1 family protein [Sinorhizobium meliloti
AK83]
gi|336038256|gb|AEH84186.1| Hypothetical protein SM11_pD1355 [Sinorhizobium meliloti SM11]
Length=149
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/128 (43%), Positives = 72/128 (57%), Gaps = 1/128 (0%)
Query 115 PTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWG 174
P + FAL+T P+++ RWM A +E + G Y VT A G+ +V P R+ +++G
Sbjct 17 PAAVFALLTDPEKILRWMGTEADVEPKPEGLYLVNVTGARFARGSFREVVPVHRLAYSFG 76
Query 175 WEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGL-TAQQAARHAKGWNHFLDRLVVAGQR 233
W+D PPG S V I L GT VRL H GL A+Q A HA+GW H+LDRL
Sbjct 77 WDDSDVVPPGSSLVEIDLIEQPDGTLVRLTHSGLPNAEQCAGHAEGWAHYLDRLSEVAAG 136
Query 234 GDAGPDEW 241
D GPD W
Sbjct 137 RDPGPDPW 144
>gi|159037174|ref|YP_001536427.1| activator of Hsp90 ATPase 1 family protein [Salinispora arenicola
CNS-205]
gi|157916009|gb|ABV97436.1| Activator of Hsp90 ATPase 1 family protein [Salinispora arenicola
CNS-205]
Length=161
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/134 (43%), Positives = 70/134 (53%), Gaps = 1/134 (0%)
Query 107 KAVVVPLDPTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPG 166
K V + T + L+T P L RW+A A IE R GG RW G G V++ P
Sbjct 6 KEVTIDAPVTLVYQLLTDPAHLVRWLADEADIEARPGGLVRWRHANGDVCTGQVVEAVPS 65
Query 167 KRVVFTWGW-EDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLD 225
+R+VFT+GW PPG +TV I L GT +RL H GL A H+ GW H+L
Sbjct 66 RRLVFTYGWARPEVQIPPGSTTVEIDLAATPDGTRLRLTHHGLADHMAEIHSGGWAHYLS 125
Query 226 RLVVAGQRGDAGPD 239
RLV A GD GPD
Sbjct 126 RLVTATGTGDPGPD 139
>gi|227818582|ref|YP_002822553.1| hypothetical protein NGR_b03360 [Sinorhizobium fredii NGR234]
gi|36958837|gb|AAQ87262.1| Transcriptional regulator, ArsR family [Sinorhizobium fredii
NGR234]
gi|227337581|gb|ACP21800.1| hypothetical protein NGR_b03360 [Sinorhizobium fredii NGR234]
Length=151
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/128 (44%), Positives = 72/128 (57%), Gaps = 1/128 (0%)
Query 115 PTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWG 174
P + FAL+T P+++ RWM A IE + G Y VT A G +V P R+ +++G
Sbjct 17 PAAVFALLTDPEKILRWMGTEAEIEPQPEGLYLVNVTGARFARGAFREVVPVHRLAYSFG 76
Query 175 WEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGL-TAQQAARHAKGWNHFLDRLVVAGQR 233
WE PPG S V I L GT +RL H GL +A+Q A HA+GW H+LDRL A
Sbjct 77 WEGSEVVPPGSSLVEIDLIEQPDGTLLRLTHTGLPSAEQCAGHAEGWAHYLDRLGEAAAG 136
Query 234 GDAGPDEW 241
D GPD W
Sbjct 137 RDPGPDPW 144
>gi|218463462|ref|ZP_03503553.1| hypothetical protein RetlK5_30308 [Rhizobium etli Kim 5]
Length=148
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/126 (43%), Positives = 70/126 (56%), Gaps = 1/126 (0%)
Query 115 PTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWG 174
P + FAL+T P+++ RWM A IE GG Y VT A G+ +V P R+ +++G
Sbjct 17 PAAVFALMTDPEKILRWMGTEAEIEPEPGGLYLVNVTGARFARGSFREVVPVHRLAYSFG 76
Query 175 WEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGL-TAQQAARHAKGWNHFLDRLVVAGQR 233
W+ PPG S V I L GT +RL H GL + +Q A HA+GW H+L RL
Sbjct 77 WDGSEVVPPGSSLVEIDLIEQPDGTLLRLTHSGLPSEEQCAGHAEGWEHYLGRLTAVAAG 136
Query 234 GDAGPD 239
GD GPD
Sbjct 137 GDPGPD 142
Lambda K H
0.319 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 885232741974
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40