BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0578c Length=1306 Score E Sequences producing significant alignments: (Bits) Value gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacteri... 2093 0.0 gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacteri... 2091 0.0 gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobac... 2090 0.0 gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacteri... 2090 0.0 gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 164 1e-37 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 147 1e-32 gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 143 3e-31 gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 141 1e-30 gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 139 3e-30 gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 139 4e-30 gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 138 6e-30 gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 138 6e-30 gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 135 4e-29 gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 134 1e-28 gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 131 8e-28 gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 131 1e-27 gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 130 2e-27 gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 129 3e-27 gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 129 3e-27 gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 129 3e-27 gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 129 3e-27 gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 129 4e-27 gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 129 5e-27 gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 128 8e-27 gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 128 8e-27 gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 128 9e-27 gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 127 1e-26 gi|183981009|ref|YP_001849300.1| PE-PGRS family protein [Mycobac... 127 1e-26 gi|183980462|ref|YP_001848753.1| PE-PGRS family protein [Mycobac... 124 1e-25 gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobac... 124 1e-25 gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacteriu... 121 7e-25 gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacteri... 121 1e-24 gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobac... 121 1e-24 gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacteri... 120 1e-24 gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobac... 120 1e-24 gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacter... 120 1e-24 gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114... 120 2e-24 gi|339299931|gb|AEJ52041.1| PE-PGRS family protein [Mycobacteriu... 120 2e-24 gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacteriu... 120 2e-24 gi|148824718|ref|YP_001289472.1| PE-PGRS family protein [Mycobac... 120 2e-24 gi|340628478|ref|YP_004746930.1| PE-PGRS family protein [Mycobac... 119 5e-24 gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobac... 117 1e-23 gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobac... 113 3e-22 gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobac... 113 3e-22 gi|183985262|ref|YP_001853553.1| PE-PGRS family protein [Mycobac... 108 6e-21 gi|183983743|ref|YP_001852034.1| PE-PGRS family protein [Mycobac... 105 8e-20 gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 104 9e-20 gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacteri... 104 1e-19 gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [... 103 2e-19 gi|339296173|gb|AEJ48284.1| hypothetical protein CCDC5079_3095 [... 103 2e-19 >gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148821780|ref|YP_001286533.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|224988968|ref|YP_002643655.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] 7 more sequence titles Length=1306 Score = 2093 bits (5422), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1306/1306 (100%), Positives = 1306/1306 (100%), Gaps = 0/1306 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE 60 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE 60 Query 61 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD 120 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD Sbjct 61 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD 120 Query 121 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH 180 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH Sbjct 121 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH 180 Query 181 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG 240 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG Sbjct 181 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG 240 Query 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ Sbjct 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300 Query 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH 360 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH Sbjct 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH 360 Query 361 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS 420 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS Sbjct 361 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS 420 Query 421 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA 480 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA Sbjct 421 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA 480 Query 481 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA 540 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA Sbjct 481 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA 540 Query 541 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG 600 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG Sbjct 541 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG 600 Query 601 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN 660 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN Sbjct 601 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN 660 Query 661 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN 720 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN Sbjct 661 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN 720 Query 721 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR 780 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR Sbjct 721 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR 780 Query 781 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD 840 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD Sbjct 781 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD 840 Query 841 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG 900 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG Sbjct 841 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG 900 Query 901 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA 960 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA Sbjct 901 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA 960 Query 961 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT 1020 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT Sbjct 961 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT 1020 Query 1021 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN 1080 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN Sbjct 1021 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN 1080 Query 1081 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA 1140 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA Sbjct 1081 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA 1140 Query 1141 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG 1200 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG Sbjct 1141 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG 1200 Query 1201 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG 1260 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG Sbjct 1201 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG 1260 Query 1261 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF 1306 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF Sbjct 1261 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF 1306 >gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617347|emb|CAD93455.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1306 Score = 2091 bits (5417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1305/1306 (99%), Positives = 1305/1306 (99%), Gaps = 0/1306 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE 60 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE 60 Query 61 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD 120 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD Sbjct 61 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD 120 Query 121 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH 180 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH Sbjct 121 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH 180 Query 181 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG 240 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG Sbjct 181 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG 240 Query 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ Sbjct 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300 Query 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH 360 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH Sbjct 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH 360 Query 361 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS 420 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS Sbjct 361 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS 420 Query 421 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA 480 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA Sbjct 421 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA 480 Query 481 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA 540 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA Sbjct 481 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA 540 Query 541 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG 600 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG Sbjct 541 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG 600 Query 601 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN 660 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN Sbjct 601 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN 660 Query 661 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN 720 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN Sbjct 661 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN 720 Query 721 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR 780 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR Sbjct 721 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR 780 Query 781 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD 840 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD Sbjct 781 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD 840 Query 841 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG 900 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG Sbjct 841 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG 900 Query 901 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA 960 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA Sbjct 901 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA 960 Query 961 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT 1020 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT Sbjct 961 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT 1020 Query 1021 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN 1080 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN Sbjct 1021 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN 1080 Query 1081 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA 1140 GSQGAGGDGGAGG GGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA Sbjct 1081 GSQGAGGDGGAGGTGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA 1140 Query 1141 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG 1200 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG Sbjct 1141 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG 1200 Query 1201 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG 1260 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG Sbjct 1201 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG 1260 Query 1261 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF 1306 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF Sbjct 1261 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF 1306 >gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148504499|gb|ABQ72308.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1306 Score = 2090 bits (5415), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1305/1306 (99%), Positives = 1305/1306 (99%), Gaps = 0/1306 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE 60 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE 60 Query 61 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD 120 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD Sbjct 61 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD 120 Query 121 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH 180 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH Sbjct 121 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH 180 Query 181 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG 240 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG Sbjct 181 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG 240 Query 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGG GGPGGAGGAGASGAHATNLGADGQ Sbjct 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGRGGPGGAGGAGASGAHATNLGADGQ 300 Query 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH 360 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH Sbjct 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH 360 Query 361 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS 420 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS Sbjct 361 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS 420 Query 421 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA 480 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA Sbjct 421 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA 480 Query 481 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA 540 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA Sbjct 481 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA 540 Query 541 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG 600 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG Sbjct 541 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG 600 Query 601 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN 660 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN Sbjct 601 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN 660 Query 661 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN 720 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN Sbjct 661 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN 720 Query 721 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR 780 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR Sbjct 721 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR 780 Query 781 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD 840 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD Sbjct 781 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD 840 Query 841 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG 900 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG Sbjct 841 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG 900 Query 901 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA 960 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA Sbjct 901 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA 960 Query 961 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT 1020 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT Sbjct 961 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT 1020 Query 1021 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN 1080 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN Sbjct 1021 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN 1080 Query 1081 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA 1140 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA Sbjct 1081 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA 1140 Query 1141 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG 1200 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG Sbjct 1141 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG 1200 Query 1201 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG 1260 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG Sbjct 1201 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG 1260 Query 1261 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF 1306 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF Sbjct 1261 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF 1306 >gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13880121|gb|AAK44830.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1306 Score = 2090 bits (5415), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1305/1306 (99%), Positives = 1305/1306 (99%), Gaps = 0/1306 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE 60 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE 60 Query 61 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD 120 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD Sbjct 61 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGAD 120 Query 121 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH 180 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH Sbjct 121 GSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGGH 180 Query 181 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG 240 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG Sbjct 181 GGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIAGVTGTSASTPG 240 Query 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ Sbjct 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300 Query 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH 360 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH Sbjct 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGH 360 Query 361 NLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS 420 NL AGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS Sbjct 361 NLRAGGTGGNGGNPGAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGDGGKGADAISS 420 Query 421 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA 480 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA Sbjct 421 GQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGGAGGNGGTQA 480 Query 481 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA 540 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA Sbjct 481 GDGGTGGAGGAGGDGGSGGAGSIGFNASAPGAAGSPGGNGGNGGPGGAGGEGGAGGLALA 540 Query 541 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG 600 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG Sbjct 541 ASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGAGGHGGDPGVGGAGGQGG 600 Query 601 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN 660 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN Sbjct 601 SGSTPGANGAPGNTPTSGGNGGNGGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGN 660 Query 661 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN 720 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN Sbjct 661 GSKGLPGLGRLGNPGLDGGTGGNGGAGGSGGAWAGNGGTGGAGGTGGVGGTGGSGSDGVN 720 Query 721 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR 780 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR Sbjct 721 GSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQGPGGAGGDGGTGGVGGNGGR 780 Query 781 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD 840 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD Sbjct 781 GIDGADGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPAGTTGSQGAGGNGGSGGTGGD 840 Query 841 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG 900 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG Sbjct 841 PGDGGNGANGSVFTNNGIGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGG 900 Query 901 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA 960 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA Sbjct 901 NGGNGDHALSGNGAAGGNGGNGGNGSLRGSGGAGGHGGNGGNASRGMGGDGGTGGAGGNA 960 Query 961 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT 1020 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT Sbjct 961 GQIGNGGAGGNGGDGGTGSDGNPGAITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGT 1020 Query 1021 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN 1080 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN Sbjct 1021 GGTGLRGTTGATGATGTFDAGADGHGGNGGTGGVGGTGGAGGGGGNGGAGGKALSPTGNN 1080 Query 1081 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA 1140 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA Sbjct 1081 GSQGAGGDGGAGGAGGTGGTGGDGGRGAHGTLFSSLAGTGGTGGNGGTGGTGGTGGAGGA 1140 Query 1141 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG 1200 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG Sbjct 1141 GGTGSTLGATGATGAAGRAGNGGVGGSGGLGSAFGPGGTGGMGGAGGTSTVSAGGDGGRG 1200 Query 1201 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG 1260 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG Sbjct 1201 GFGGDGLDASSGGNGGDGGHGGDGFRTAGAGGRGGDGGKGADPGGLFPIPGAGGKGGTGG 1260 Query 1261 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF 1306 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF Sbjct 1261 TGGTAHLGPLAIIGQSGQPGQFGSPGADGRGGAGGAGGGGGAGGSF 1306 >gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1425 Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 107/157 (69%), Positives = 121/157 (78%), Gaps = 1/157 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MSF + P+MLT AA DLAKIG+ I +TAAAA +LPA+ADEVS A+A+LFGTHA Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 YQ + AQ ATFHD FVQ LS AAS Y A E NVEQ+LL +NAPTQALFGRPLIGNGA Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVANVEQNLLGLINAPTQALFGRPLIGNGA 120 Query 120 DGSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGA 156 DG+ GTGQ G GG+L+GNGG GGSGAPGQ GG GGA Sbjct 121 DGAAGTGQTGQAGGLLWGNGGAGGSGAPGQSGGTGGA 157 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/120 (67%), Positives = 94/120 (79%), Gaps = 1/120 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MSFV TPEM+ AA+DL+ I S I AN+ AAA VLPA+ADEVS A+AALFGTHAQ Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 +YQ +SA++A FHDRFVQ+L+ A SY+ AEA N EQ LL VNAPTQALFGRPLIG+GA Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAEQGLLGLVNAPTQALFGRPLIGDGA 120 >gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079] Length=1330 Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 91/122 (75%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI TPE + AA+D+A+IGS+I AN+AAA + VL A ADEVS A+A LFG+HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180] Length=1330 Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI TPE + AA+D+A+IGS+I AN+AAA + VL A AD+VS A+A LFG+HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1389 Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI PE + AA D+A+IGS+I AN+AAA + VL A ADEVS A+A LFG+HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=1399 Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI PE + AA D+A+IGS+I AN+AAA + VL A ADEVS A+A LFG+HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1006 Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 91/122 (75%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI TPE++ AA+D+A+IGS AAN+ AA + VL A ADEVS A+A LFG+HA+ Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRFVQTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1408 Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 89/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI PE + AA D+A+IGS+I AN+AAA + VL A ADEVS A+A LFG+HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1386 Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 74/123 (61%), Positives = 90/123 (74%), Gaps = 9/123 (7%) Query 1 MSFV-IATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHA 58 MSFV +A PEM+ AA+DL ++GSTI+AAN AAA + +L A ADEVS +AALFGTHA Sbjct 1 MSFVGVA-PEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHA 59 Query 59 QEYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNV------EQSLLAAVNAPTQALFGR 112 EYQ +S Q++ FH++FVQTL+ +Y AAE VNV EQ LL VNAPTQALFGR Sbjct 60 LEYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGR 119 Query 113 PLI 115 PLI Sbjct 120 PLI 122 >gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1483 Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/121 (62%), Positives = 91/121 (76%), Gaps = 1/121 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAV-AKVLPASADEVSVAVAALFGTHAQ 59 MSFV PEM+ A DLA IGS+I+AAN AA A+ V+PA+ADEVS A+AALFG+HA+ Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQ A FH+R VQTL + AS+Y+ E N +Q+LL AVN PTQA GRPLIGNG Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANAQQNLLNAVNGPTQAWLGRPLIGNGT 120 Query 120 D 120 D Sbjct 121 D 121 >gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 1435] gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 4207] Length=1408 Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 73/122 (60%), Positives = 88/122 (73%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTI-TAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI TPE + AA+D+A+IGS+I A AA + VL A ADEVS A+A LFG+HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1660 Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 92/125 (74%), Gaps = 3/125 (2%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN--VEQSLLAAVNAPTQALFGRPLIGN 117 EYQ +SAQ A FHD+FV TL+AAA Y A E N +++L AVNAPTQ L GRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAVLGAVNAPTQTLLGRPLIGD 120 Query 118 GADGS 122 GA G+ Sbjct 121 GAHGT 125 >gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=1323 Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 91/125 (73%), Gaps = 3/125 (2%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN--VEQSLLAAVNAPTQALFGRPLIGN 117 EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+ Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125 Query 118 GADGS 122 GA G+ Sbjct 126 GAHGT 130 >gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1657 Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 91/125 (73%), Gaps = 3/125 (2%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN--VEQSLLAAVNAPTQALFGRPLIGN 117 EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 118 GADGS 122 GA G+ Sbjct 121 GAHGT 125 >gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1665 Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 91/125 (73%), Gaps = 3/125 (2%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN--VEQSLLAAVNAPTQALFGRPLIGN 117 EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+ Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125 Query 118 GADGS 122 GA G+ Sbjct 126 GAHGT 130 >gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1644 Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 91/125 (73%), Gaps = 3/125 (2%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN--VEQSLLAAVNAPTQALFGRPLIGN 117 EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 118 GADGS 122 GA G+ Sbjct 121 GAHGT 125 >gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis (strain H37RV) gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1660 Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 91/125 (73%), Gaps = 3/125 (2%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN--VEQSLLAAVNAPTQALFGRPLIGN 117 EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 118 GADGS 122 GA G+ Sbjct 121 GAHGT 125 >gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis (strain H37RV) gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=1329 Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTI-TAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI PE + AA D+A+IGS+I A AA + VL A ADEVS A+A LFG+HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN 1435] gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN 4207] Length=1616 Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 91/125 (73%), Gaps = 3/125 (2%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN--VEQSLLAAVNAPTQALFGRPLIGN 117 EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 118 GADGS 122 GA G+ Sbjct 121 GAHGT 125 >gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1408 Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTI-TAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI PE + AA D+A+IGS+I A AA + VL A ADEVS A+A LFG+HA+ Sbjct 2 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1407 Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTI-TAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI PE + AA D+A+IGS+I A AA + VL A ADEVS A+A LFG+HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1398 Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTI-TAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI PE + AA D+A+IGS+I A AA + VL A ADEVS A+A LFG+HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] Length=2118 Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/133 (54%), Positives = 93/133 (70%), Gaps = 10/133 (7%) Query 1 MSFVIATPEMLTTAATDLAKIGSTI-TAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 MS V +PE++ AA+DLA+IGS++ A AA VL A+ADEVSVA+A LFGTHA Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN---------VEQSLLAAVNAPTQALF 110 EYQ++SA++A FH++FVQTL++ A YV+ EA N EQ+ L A+NAPTQ+ Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120 Query 111 GRPLIGNGADGSP 123 GRPLIGNG D +P Sbjct 121 GRPLIGNGVDATP 133 >gi|183981009|ref|YP_001849300.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174335|gb|ACC39445.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1050 Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/132 (56%), Positives = 88/132 (67%), Gaps = 9/132 (6%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQE 60 MSFV +PE++ A L +IGS+I AN AA A VLP DEVSVA+AALF H +E Sbjct 1 MSFVSVSPELVIDGAAALTQIGSSIDEANAAAGATTAVLPPGVDEVSVALAALFVAHGRE 60 Query 61 YQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN---------VEQSLLAAVNAPTQALFG 111 Y+++SAQVA FH RFVQ L+AA+ Y AEA N VEQ +L +NAPTQALFG Sbjct 61 YESLSAQVALFHRRFVQMLAAASGGYAEAEAANISAVAGLETVEQCVLDVINAPTQALFG 120 Query 112 RPLIGNGADGSP 123 LIGNG DG+P Sbjct 121 WSLIGNGTDGAP 132 >gi|183980462|ref|YP_001848753.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183173788|gb|ACC38898.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1134 Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/123 (52%), Positives = 89/123 (73%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 M+FV+ +PE + +AA D+ +IG+ +T N AAA+ V A+ADEVS A+AALF HA+ Sbjct 1 MTFVLVSPEAMASAAADIERIGALLTQGNAAAASPTINVASAAADEVSTAIAALFSQHAK 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 YQ ++A++A DRF +T+ A+A+SY +AEA N +LL +N PTQAL GRPLIGNGA Sbjct 61 TYQLLAAELAAIPDRFTKTVLASANSYASAEATNAADALLGVINTPTQALLGRPLIGNGA 120 Query 120 DGS 122 +G+ Sbjct 121 NGT 123 >gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174935|gb|ACC40045.1| PE-PGRS family protein [Mycobacterium marinum M] Length=3634 Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/120 (57%), Positives = 87/120 (73%), Gaps = 1/120 (0%) Query 1 MSFVIATPEMLTTAATDLAKIG-STITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 MS++ +PE++++AA +LA IG + A AA A ++L A +DEVS +AALFG + Sbjct 1 MSYMSISPEIVSSAAGELANIGSTVSAANAAAAVATTELLAAGSDEVSTRIAALFGANGV 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQ+A+FHDRFV L+ SSYV AEA NVEQ+LL AVNAP Q L GRPLIGNGA Sbjct 61 EYQAISAQIASFHDRFVAALNTGTSSYVWAEATNVEQNLLNAVNAPVQTLLGRPLIGNGA 120 >gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=1657 Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 88/122 (73%), Gaps = 3/122 (2%) Query 4 VIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQEYQ 62 +IATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQEYQ Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60 Query 63 TVSAQVATFHDRFVQTLSAAASSYVAAEAVN--VEQSLLAAVNAPTQALFGRPLIGNGAD 120 +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+GA Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH 120 Query 121 GS 122 G+ Sbjct 121 GT 122 >gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=1695 Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 94/123 (77%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL +NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224775041|dbj|BAH27847.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] Length=1695 Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 94/123 (77%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL +NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31620284|emb|CAD95727.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1938 Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 94/123 (77%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL +NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332869|emb|CCC28593.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1817 Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 94/123 (77%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL +NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121495078|emb|CAL73564.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=1810 Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 94/123 (77%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL +NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114 [Mycobacterium tuberculosis KZN 1435] gi|253322056|gb|ACT26659.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328460284|gb|AEB05707.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=1767 Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 94/123 (77%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL +NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|339299931|gb|AEJ52041.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=1542 Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 94/123 (77%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL +NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1787 Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 94/123 (77%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL +NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|148824718|ref|YP_001289472.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148723245|gb|ABR07870.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=1888 Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 94/123 (77%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL +NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|340628478|ref|YP_004746930.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340006668|emb|CCC45856.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1702 Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 1/123 (0%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV+ +PE+++ AA DLA +GSTI+AAN AAAA + A+ ADEVS +AALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 EYQ +SAQVA +H +FVQTL A+SY+ AEA NVEQ+LL NAPTQ L GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLTNAPTQTLLGRPLIGDGA 120 Query 120 DGS 122 + + Sbjct 121 NAT 123 >gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174547|gb|ACC39657.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1610 Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/125 (57%), Positives = 89/125 (72%), Gaps = 3/125 (2%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 M +V+A PE+L+ AA+DLA IGS + AAN AA VL A+ADEVS A+A LFGT+A+ Sbjct 1 MGYVVAAPEILSVAASDLANIGSALQAANAAATTPTVSVLAAAADEVSEAIAELFGTYAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVE--QSLLAAVNAPTQALFGRPLIGN 117 +YQ +SAQ A FH FVQ ++A A Y A E N Q+LL AVNA T+A+ GRPLIGN Sbjct 61 DYQAISAQAARFHAEFVQAVNADAEWYSATEVANASPLQTLLGAVNAQTEAMIGRPLIGN 120 Query 118 GADGS 122 GADG+ Sbjct 121 GADGT 125 >gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178656|gb|ACC43766.1| PE-PGRS family protein [Mycobacterium marinum M] Length=2001 Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/130 (54%), Positives = 90/130 (70%), Gaps = 7/130 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAK-VLPASADEVSVAVAALFGTHAQ 59 MS+VIATP+ML AA+DL IGST+ AAN+AA A +L A+ DEVS A+A+LF AQ Sbjct 1 MSYVIATPDMLAAAASDLTNIGSTLGAANSAALARTTGLLAAAEDEVSTAIASLFSASAQ 60 Query 60 EYQTVSAQVATFHDRFVQTLS------AAASSYVAAEAVNVEQSLLAAVNAPTQALFGRP 113 EYQ VS + A H FV +L+ AAA + A+ +EQ++LAA+NAP+QAL RP Sbjct 61 EYQMVSTRAAHLHAEFVHSLTRAGAAYAAAEAVNASPLQTLEQNVLAAINAPSQALTARP 120 Query 114 LIGNGADGSP 123 L G+GADG+P Sbjct 121 LFGDGADGAP 130 >gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004654|emb|CCC43798.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1408 Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/122 (58%), Positives = 85/122 (70%), Gaps = 7/122 (5%) Query 1 MSFVIATPEMLTTAATDLAKI-GSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 MS VI TPE + AA+D+A+I A AA + VL A ADEVS A+A LFG++A+ Sbjct 1 MSLVIVTPESVAAAASDVARIGSGFGAANAAAAGSTTSVLAAGADEVSAAIALLFGSYAR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ +S QVA FHDRFVQTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|183985262|ref|YP_001853553.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178588|gb|ACC43698.1| PE-PGRS family protein [Mycobacterium marinum M] Length=2432 Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/127 (54%), Positives = 83/127 (66%), Gaps = 7/127 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MSFV P +L AA DLA +G+ + AN AAA A VLPA+ DEVS A+A LFG + Sbjct 1 MSFVSVAPSLLDAAARDLAGLGAGLREANLAAAGATMGVLPAAGDEVSAAIAELFGGFGR 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 EYQ V A++A HD FV+ L+A S+Y AEA+N +EQ L VNAP+ ALFGRP Sbjct 61 EYQAVGARMALLHDDFVRALTAGGSAYGQAEALNMWPLQELEQQALGVVNAPSMALFGRP 120 Query 114 LIGNGAD 120 LIGNG D Sbjct 121 LIGNGVD 127 >gi|183983743|ref|YP_001852034.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177069|gb|ACC42179.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1814 Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 121/198 (62%), Positives = 145/198 (74%), Gaps = 10/198 (5%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAAVAKVLPAS-ADEVSVAVAALFGTHAQ 59 MSFV PE + TAA+DLA+IGS+I A N AAA + A+ ADEVSVA+AALFGTHAQ Sbjct 1 MSFVSVAPEAVATAASDLARIGSSIDAVNAAAAGATTTVLAAGADEVSVAIAALFGTHAQ 60 Query 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNV------EQSLLAAVNAPTQALFGRP 113 EYQ +S +++ ++RFV L+A +SY A+E+ +V EQ +L VNAP+Q FGRP Sbjct 61 EYQAISTRISALNERFVALLTAGNNSYAASESASVSWLQAVEQDVLGLVNAPSQNWFGRP 120 Query 114 LIGNGADGSPGTGQAGGPGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGT 173 LIGNGADG GTGQAGG GGIL+GNGG GGSGA GQ GGAGG+AGL+G+GG GGAGG Sbjct 121 LIGNGADGVAGTGQAGGAGGILWGNGGAGGSGAVGQSGGAGGSAGLLGHGGAGGAGGQAG 180 Query 174 TGGAGGHGGAGG---WLY 188 G GG GGAGG WLY Sbjct 181 ASGTGGVGGAGGAGGWLY 198 >gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1451 Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 75/139 (54%), Positives = 99/139 (72%), Gaps = 3/139 (2%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 MS++IA PE++ +AA DLA I S ++AAN +AA ++L A ADEVS A+AALFG HAQ Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60 Query 60 EYQTVSAQVATFHDRFVQTLSA--AASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGN 117 YQ + + V FH FVQ L++ A+ + A ++ Q+L VNAPTQAL GRPLIGN Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYDLVNAPTQALLGRPLIGN 120 Query 118 GADGSPGTGQAGGPGGILY 136 GA+G+PGTGQ GG GG+L+ Sbjct 121 GANGAPGTGQNGGDGGLLF 139 >gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13883276|gb|AAK47791.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1507 Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/134 (53%), Positives = 92/134 (69%), Gaps = 16/134 (11%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MS ++A PE++ AA DL IG I+AAN AAA +VL A+ DEVS A+AALFGTHAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 60 EYQTVSAQVATFHDRFVQTLSAA----------ASSYVAAEAVNVEQSLLAAVNAPTQAL 109 EYQ +SA+VATFH++FV++L+AA +S + A +EQ +L A+NAPTQ Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQA----LEQQVLGAINAPTQLW 117 Query 110 FGRPLIGNGADGSP 123 GRPLIG+G G+P Sbjct 118 LGRPLIGDGVHGAP 131 >gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [Mycobacterium tuberculosis CCDC5180] Length=1562 Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/134 (53%), Positives = 92/134 (69%), Gaps = 16/134 (11%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MS ++A PE++ AA DL IG I+AAN AAA +VL A+ DEVS A+AALFGTHAQ Sbjct 1 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 59 Query 60 EYQTVSAQVATFHDRFVQTLSAA----------ASSYVAAEAVNVEQSLLAAVNAPTQAL 109 EYQ +SA+VATFH++FV++L+AA +S + A +EQ +L A+NAPTQ Sbjct 60 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQA----LEQQVLGAINAPTQLW 115 Query 110 FGRPLIGNGADGSP 123 GRPLIG+G G+P Sbjct 116 LGRPLIGDGVHGAP 129 >gi|339296173|gb|AEJ48284.1| hypothetical protein CCDC5079_3095 [Mycobacterium tuberculosis CCDC5079] Length=1536 Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/134 (53%), Positives = 92/134 (69%), Gaps = 16/134 (11%) Query 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAA-AVAKVLPASADEVSVAVAALFGTHAQ 59 MS ++A PE++ AA DL IG I+AAN AAA +VL A+ DEVS A+AALFGTHAQ Sbjct 1 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 59 Query 60 EYQTVSAQVATFHDRFVQTLSAA----------ASSYVAAEAVNVEQSLLAAVNAPTQAL 109 EYQ +SA+VATFH++FV++L+AA +S + A +EQ +L A+NAPTQ Sbjct 60 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQA----LEQQVLGAINAPTQLW 115 Query 110 FGRPLIGNGADGSP 123 GRPLIG+G G+P Sbjct 116 LGRPLIGDGVHGAP 129 Lambda K H 0.305 0.140 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 3352338902008 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40