BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0581

Length=71
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607721|ref|NP_215095.1|  hypothetical protein Rv0581 [Mycoba...   137    6e-31
gi|167969003|ref|ZP_02551280.1|  hypothetical protein MtubH3_1363...   136    1e-30
gi|289446134|ref|ZP_06435878.1|  antitoxin [Mycobacterium tubercu...   135    2e-30
gi|289573180|ref|ZP_06453407.1|  antitoxin [Mycobacterium tubercu...   135    2e-30
gi|254363539|ref|ZP_04979585.1|  conserved hypothetical protein [...   135    3e-30
gi|340625611|ref|YP_004744063.1|  hypothetical protein MCAN_05871...   134    5e-30
gi|336116925|ref|YP_004571692.1|  hypothetical protein MLP_12750 ...  48.1    4e-04
gi|291302897|ref|YP_003514175.1|  hypothetical protein Snas_5450 ...  43.9    0.008
gi|320450430|ref|YP_004202526.1|  ribbon-helix-helix protein, Cop...  43.5    0.010
gi|302560990|ref|ZP_07313332.1|  hypothetical protein SSRG_04505 ...  40.0    0.12 
gi|218296562|ref|ZP_03497290.1|  CopG domain protein DNA-binding ...  38.1    0.47 
gi|291446799|ref|ZP_06586189.1|  predicted protein [Streptomyces ...  37.7    0.51 
gi|332321844|sp|P0CW33.1|VPB25_MYCTU  RecName: Full=Antitoxin VapB25  37.0    0.94 
gi|121636191|ref|YP_976414.1|  antitoxin [Mycobacterium bovis BCG...  37.0    0.94 
gi|320009266|gb|ADW04116.1|  hypothetical protein Sfla_2688 [Stre...  36.6    1.3  
gi|302559526|ref|ZP_07311868.1|  hypothetical protein SSRG_03041 ...  35.8    2.2  
gi|268318038|ref|YP_003291757.1|  CopG domain-containing protein ...  35.4    2.5  
gi|220935249|ref|YP_002514148.1|  CopG family transcriptional reg...  35.4    2.8  
gi|297623628|ref|YP_003705062.1|  CopG domain-containing protein ...  35.4    2.9  
gi|302552930|ref|ZP_07305272.1|  predicted protein [Streptomyces ...  35.4    3.0  
gi|302543814|ref|ZP_07296156.1|  hypothetical protein SSOG_04239 ...  35.4    3.1  
gi|294630479|ref|ZP_06709039.1|  hypothetical protein SSTG_02480 ...  35.0    3.7  
gi|328883431|emb|CCA56670.1|  hypothetical protein SVEN_3384 [Str...  35.0    3.8  
gi|329939282|ref|ZP_08288618.1|  hypothetical protein SGM_4110 [S...  34.7    4.6  
gi|119899366|ref|YP_934579.1|  hypothetical protein azo3076 [Azoa...  33.9    7.6  
gi|342196394|emb|CBZ42146.1|  putative non-ribosomal peptide synt...  33.9    9.2  


>gi|15607721|ref|NP_215095.1| hypothetical protein Rv0581 [Mycobacterium tuberculosis H37Rv]
 gi|31791763|ref|NP_854256.1| hypothetical protein Mb0596 [Mycobacterium bovis AF2122/97]
 gi|121636499|ref|YP_976722.1| hypothetical protein BCG_0626 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 68 more sequence titles
 Length=71

 Score =  137 bits (344),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 70/71 (99%), Positives = 71/71 (100%), Gaps = 0/71 (0%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60
           +DKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR
Sbjct  1   MDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60

Query  61  VDELLAGFGER  71
           VDELLAGFGER
Sbjct  61  VDELLAGFGER  71


>gi|167969003|ref|ZP_02551280.1| hypothetical protein MtubH3_13632 [Mycobacterium tuberculosis 
H37Ra]
Length=71

 Score =  136 bits (342),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 69/71 (98%), Positives = 71/71 (100%), Gaps = 0/71 (0%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60
           +DKTTVYLPDELKA+VKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR
Sbjct  1   MDKTTVYLPDELKASVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60

Query  61  VDELLAGFGER  71
           VDELLAGFGER
Sbjct  61  VDELLAGFGER  71


>gi|289446134|ref|ZP_06435878.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289419092|gb|EFD16293.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
Length=71

 Score =  135 bits (341),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 69/71 (98%), Positives = 70/71 (99%), Gaps = 0/71 (0%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60
           +D TTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR
Sbjct  1   MDNTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60

Query  61  VDELLAGFGER  71
           VDELLAGFGER
Sbjct  61  VDELLAGFGER  71


>gi|289573180|ref|ZP_06453407.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289537611|gb|EFD42189.1| antitoxin [Mycobacterium tuberculosis K85]
Length=71

 Score =  135 bits (340),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 69/70 (99%), Positives = 70/70 (100%), Gaps = 0/70 (0%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60
           +DKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR
Sbjct  1   MDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60

Query  61  VDELLAGFGE  70
           VDELLAGFGE
Sbjct  61  VDELLAGFGE  70


>gi|254363539|ref|ZP_04979585.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134149053|gb|EBA41098.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
Length=71

 Score =  135 bits (339),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 69/71 (98%), Positives = 70/71 (99%), Gaps = 0/71 (0%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60
           +DKTTVYLPDELKAAVKRAARQRGVSEAQVIRESI AAVGGAKPPPRGGLYAGSEPIARR
Sbjct  1   MDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIWAAVGGAKPPPRGGLYAGSEPIARR  60

Query  61  VDELLAGFGER  71
           VDELLAGFGER
Sbjct  61  VDELLAGFGER  71


>gi|340625611|ref|YP_004744063.1| hypothetical protein MCAN_05871 [Mycobacterium canettii CIPT 
140010059]
 gi|340003801|emb|CCC42927.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=71

 Score =  134 bits (337),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 68/71 (96%), Positives = 70/71 (99%), Gaps = 0/71 (0%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60
           +DKTTVYLPDELKAAVK AARQRGVSEA+VIRESIRAAVGGAKPPPRGGLYAGSEPIARR
Sbjct  1   MDKTTVYLPDELKAAVKHAARQRGVSEAEVIRESIRAAVGGAKPPPRGGLYAGSEPIARR  60

Query  61  VDELLAGFGER  71
           VDELLAGFGER
Sbjct  61  VDELLAGFGER  71


>gi|336116925|ref|YP_004571692.1| hypothetical protein MLP_12750 [Microlunatus phosphovorus NM-1]
 gi|334684704|dbj|BAK34289.1| hypothetical protein MLP_12750 [Microlunatus phosphovorus NM-1]
Length=77

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 28/74 (38%), Positives = 46/74 (63%), Gaps = 6/74 (8%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAV---GGAKPPPRGGLY-AGSEPIA  58
           +TT+YLPD+LKAA++  A+  G +E+ +IRE++   +   G      R GLY +G+   +
Sbjct  3   RTTIYLPDDLKAALEARAQADGRTESDIIREALAEKLRGSGKTASQMRFGLYDSGTATTS  62

Query  59  RRVDELL--AGFGE  70
             VD++L   GFG+
Sbjct  63  TDVDDILTATGFGD  76


>gi|291302897|ref|YP_003514175.1| hypothetical protein Snas_5450 [Stackebrandtia nassauensis DSM 
44728]
 gi|290572117|gb|ADD45082.1| hypothetical protein Snas_5450 [Stackebrandtia nassauensis DSM 
44728]
Length=79

 Score = 43.9 bits (102),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 30/73 (42%), Positives = 42/73 (58%), Gaps = 4/73 (5%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRG---GLYAGSEPI  57
           + +TTVYLP+     +K+ AR+ G SEAQ+IRE +   +  A    RG    + +G    
Sbjct  1   MKRTTVYLPEADAQLLKQVARRTGKSEAQLIREGVAHVLQAAPTRARGLRMVVNSGDPQW  60

Query  58  ARRVD-ELLAGFG  69
           A RVD EL +GFG
Sbjct  61  ANRVDGELASGFG  73


>gi|320450430|ref|YP_004202526.1| ribbon-helix-helix protein, CopG family [Thermus scotoductus 
SA-01]
 gi|320150599|gb|ADW21977.1| ribbon-helix-helix protein, CopG family [Thermus scotoductus 
SA-01]
 gi|333966588|gb|AEG33353.1| CopG-like domain-containing protein DNA-binding protein [Thermus 
thermophilus SG0.5JP17-16]
Length=74

 Score = 43.5 bits (101),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 21/45 (47%), Positives = 33/45 (74%), Gaps = 0/45 (0%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPP  45
           ++KTT+YLP EL  A+K AAR+ G S+A++IRE++ A +   + P
Sbjct  1   MEKTTLYLPPELHRALKEAARREGKSQAELIREALAAYLTQRQRP  45


>gi|302560990|ref|ZP_07313332.1| hypothetical protein SSRG_04505 [Streptomyces griseoflavus Tu4000]
 gi|302478608|gb|EFL41701.1| hypothetical protein SSRG_04505 [Streptomyces griseoflavus Tu4000]
Length=83

 Score = 40.0 bits (92),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 26/73 (36%), Positives = 40/73 (55%), Gaps = 6/73 (8%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVG----GAKPPPRGGLYAGSEPIA  58
           +TTVYL ++    +K  A +RG+SEA++IRE +R A+       +P       +G    A
Sbjct  5   RTTVYLEEDDLHDLKDTAVRRGISEAELIREGVRLAIARNRVWDEPAGLPVFDSGDATFA  64

Query  59  RRVDELL--AGFG  69
            R D++L   GFG
Sbjct  65  ERGDDILGETGFG  77


>gi|218296562|ref|ZP_03497290.1| CopG domain protein DNA-binding domain protein [Thermus aquaticus 
Y51MC23]
 gi|218243104|gb|EED09636.1| CopG domain protein DNA-binding domain protein [Thermus aquaticus 
Y51MC23]
Length=77

 Score = 38.1 bits (87),  Expect = 0.47, Method: Compositional matrix adjust.
 Identities = 22/56 (40%), Positives = 36/56 (65%), Gaps = 3/56 (5%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSEP  56
           + KTT+YLP  LK  ++  ARQ G S+A+++RE++   +  ++P  R  L AG +P
Sbjct  1   MKKTTLYLPQRLKRLLEMRARQEGRSQAELVREALERYL--SRPASR-SLGAGEDP  53


>gi|291446799|ref|ZP_06586189.1| predicted protein [Streptomyces roseosporus NRRL 15998]
 gi|291349746|gb|EFE76650.1| predicted protein [Streptomyces roseosporus NRRL 15998]
Length=107

 Score = 37.7 bits (86),  Expect = 0.51, Method: Compositional matrix adjust.
 Identities = 20/46 (44%), Positives = 28/46 (61%), Gaps = 0/46 (0%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRG  48
           KTTVYLPDEL+  +   +   GVS+A++IR  I   +  A+ P R 
Sbjct  30  KTTVYLPDELEVRLDAESSATGVSKAELIRRGIAMLLDSAERPKRS  75


>gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25
Length=85

 Score = 37.0 bits (84),  Expect = 0.94, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 29/47 (62%), Gaps = 5/47 (10%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIR-----AAVGGAKP  44
           +TTV + DEL A  KR AR+RG S   VI +++R     A  GGA+P
Sbjct  2   RTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARP  48


>gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224988664|ref|YP_002643351.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|121491838|emb|CAL70300.1| Conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|224771777|dbj|BAH24583.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|341600207|emb|CCC62876.1| conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Moreau RDJ]
Length=85

 Score = 37.0 bits (84),  Expect = 0.94, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 29/47 (62%), Gaps = 5/47 (10%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIR-----AAVGGAKP  44
           +TTV + DEL A  KR AR+RG S   VI +++R     A  GGA+P
Sbjct  2   RTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARP  48


>gi|320009266|gb|ADW04116.1| hypothetical protein Sfla_2688 [Streptomyces flavogriseus ATCC 
33331]
Length=80

 Score = 36.6 bits (83),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 18/47 (39%), Positives = 29/47 (62%), Gaps = 0/47 (0%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGG  49
           KTTVYLP++L+  +   +   GVS+A++IR  +   +  A+ P R G
Sbjct  3   KTTVYLPEDLEVRLDAESSATGVSKAELIRRGVAMILDHAERPKRSG  49


>gi|302559526|ref|ZP_07311868.1| hypothetical protein SSRG_03041 [Streptomyces griseoflavus Tu4000]
 gi|302477144|gb|EFL40237.1| hypothetical protein SSRG_03041 [Streptomyces griseoflavus Tu4000]
Length=123

 Score = 35.8 bits (81),  Expect = 2.2, Method: Compositional matrix adjust.
 Identities = 17/36 (48%), Positives = 25/36 (70%), Gaps = 0/36 (0%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAA  38
           +T VY   E  A +K AA++RG+SEA++IR+ I  A
Sbjct  40  RTNVYADPEDLAIIKEAAKRRGISEAEIIRQGIHLA  75


>gi|268318038|ref|YP_003291757.1| CopG domain-containing protein DNA-binding domain-containing 
protein [Rhodothermus marinus DSM 4252]
 gi|262335572|gb|ACY49369.1| CopG domain protein DNA-binding domain protein [Rhodothermus 
marinus DSM 4252]
Length=91

 Score = 35.4 bits (80),  Expect = 2.5, Method: Compositional matrix adjust.
 Identities = 17/45 (38%), Positives = 28/45 (63%), Gaps = 0/45 (0%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPR  47
           +   Y+  E   A+++ ARQ+GVSE++V+R  + AA+G    P R
Sbjct  3   RKQFYITAEQDQAIRQLARQQGVSESEVVRRVLEAALGQLPLPSR  47


>gi|220935249|ref|YP_002514148.1| CopG family transcriptional regulator [Thioalkalivibrio sulfidophilus 
HL-EbGr7]
 gi|219996559|gb|ACL73161.1| putative transcriptional regulator, CopG family [Thioalkalivibrio 
sulfidophilus HL-EbGr7]
Length=73

 Score = 35.4 bits (80),  Expect = 2.8, Method: Compositional matrix adjust.
 Identities = 21/57 (37%), Positives = 32/57 (57%), Gaps = 4/57 (7%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPP----PRGGLYAGSE  55
           +T V LPDE   A+K  A++  +S+A+ IR ++RA +     P    P  GL+ G E
Sbjct  2   RTVVDLPDEELQAIKALAKREKISQAEAIRRAVRAYLHARPAPDKESPAFGLWEGRE  58


>gi|297623628|ref|YP_003705062.1| CopG domain-containing protein DNA-binding domain-containing 
protein [Truepera radiovictrix DSM 17093]
 gi|297164808|gb|ADI14519.1| CopG domain protein DNA-binding domain protein [Truepera radiovictrix 
DSM 17093]
Length=96

 Score = 35.4 bits (80),  Expect = 2.9, Method: Compositional matrix adjust.
 Identities = 25/75 (34%), Positives = 41/75 (55%), Gaps = 5/75 (6%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPP---PR--GGLYAGSE  55
           + +TTVY+ ++    +   ARQ+G  +A+++RE++   V   + P   PR  G   +G  
Sbjct  1   MKRTTVYVDEKTDLELAHLARQQGRPKAELVREALSRYVERQRTPRPLPRSVGMGRSGLP  60

Query  56  PIARRVDELLAGFGE  70
            +A R DELL G  E
Sbjct  61  DLAERTDELLGGLYE  75


>gi|302552930|ref|ZP_07305272.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302470548|gb|EFL33641.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
Length=103

 Score = 35.4 bits (80),  Expect = 3.0, Method: Compositional matrix adjust.
 Identities = 18/38 (48%), Positives = 26/38 (69%), Gaps = 0/38 (0%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAA  38
           + +T VY   E  A +K AA++RGVSEA++IR+ I  A
Sbjct  18  MKRTNVYADPEDLAIIKEAAKRRGVSEAEIIRQGIHLA  55


>gi|302543814|ref|ZP_07296156.1| hypothetical protein SSOG_04239 [Streptomyces hygroscopicus ATCC 
53653]
 gi|302461432|gb|EFL24525.1| hypothetical protein SSOG_04239 [Streptomyces himastatinicus 
ATCC 53653]
Length=86

 Score = 35.4 bits (80),  Expect = 3.1, Method: Compositional matrix adjust.
 Identities = 17/36 (48%), Positives = 25/36 (70%), Gaps = 0/36 (0%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAA  38
           +T VY   E  A +K AA++RG+SEA++IR+ I  A
Sbjct  5   RTNVYADPEDLAIIKEAAKRRGISEAEIIRQGIHLA  40


>gi|294630479|ref|ZP_06709039.1| hypothetical protein SSTG_02480 [Streptomyces sp. e14]
 gi|292833812|gb|EFF92161.1| hypothetical protein SSTG_02480 [Streptomyces sp. e14]
Length=94

 Score = 35.0 bits (79),  Expect = 3.7, Method: Compositional matrix adjust.
 Identities = 17/36 (48%), Positives = 25/36 (70%), Gaps = 0/36 (0%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAA  38
           +T VY   E  A +K AA++RG+SEA++IR+ I  A
Sbjct  11  RTNVYADPEDLAIIKEAAKRRGISEAEIIRQGIHLA  46


>gi|328883431|emb|CCA56670.1| hypothetical protein SVEN_3384 [Streptomyces venezuelae ATCC 
10712]
Length=88

 Score = 35.0 bits (79),  Expect = 3.8, Method: Compositional matrix adjust.
 Identities = 17/38 (45%), Positives = 26/38 (69%), Gaps = 0/38 (0%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAA  38
           + +T VY   E  A +K AA++RG+SEA++IR+ I  A
Sbjct  3   MKRTNVYADPEDLAIIKEAAKRRGISEAEIIRQGIHLA  40


>gi|329939282|ref|ZP_08288618.1| hypothetical protein SGM_4110 [Streptomyces griseoaurantiacus 
M045]
 gi|329301511|gb|EGG45405.1| hypothetical protein SGM_4110 [Streptomyces griseoaurantiacus 
M045]
Length=88

 Score = 34.7 bits (78),  Expect = 4.6, Method: Compositional matrix adjust.
 Identities = 17/36 (48%), Positives = 25/36 (70%), Gaps = 0/36 (0%)

Query  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAA  38
           +T VY   E  A +K AA++RG+SEA++IR+ I  A
Sbjct  5   RTNVYADPEDLAIIKEAAKRRGISEAEIIRQGIHLA  40


>gi|119899366|ref|YP_934579.1| hypothetical protein azo3076 [Azoarcus sp. BH72]
 gi|119671779|emb|CAL95693.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length=96

 Score = 33.9 bits (76),  Expect = 7.6, Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 30/55 (55%), Gaps = 2/55 (3%)

Query  1   VDKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGLYAGSE  55
           +  TT+ LPDELKA V  AA++ G +    I E+I  A    +   R GL A +E
Sbjct  1   MSTTTIRLPDELKARVAEAAKRAGTTSHNFILEAI--AEKAEQAEARAGLDAEAE  53


>gi|342196394|emb|CBZ42146.1| putative non-ribosomal peptide synthetase [Streptomyces himastatinicus 
ATCC 53653]
Length=5081

 Score = 33.9 bits (76),  Expect = 9.2, Method: Compositional matrix adjust.
 Identities = 26/68 (39%), Positives = 35/68 (52%), Gaps = 9/68 (13%)

Query  2     DKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAA---VGGAKPPPRGGLYAGSEPIA  58
             D     LP +L AAVK  ARQRG + + V++ ++      +GG        +  GS PIA
Sbjct  2906  DLVDFTLPPDLVAAVKELARQRGATVSMVMQSALAVLLRQLGGGD-----DITIGS-PIA  2959

Query  59    RRVDELLA  66
              R DE LA
Sbjct  2960  NRTDEALA  2967



Lambda     K      H
   0.315    0.135    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127819123992




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40