BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0586
Length=240
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607726|ref|NP_215100.1| GntR family transcriptional regulat... 479 1e-133
gi|340625616|ref|YP_004744068.1| putative transcriptional regula... 476 1e-132
gi|342858890|ref|ZP_08715544.1| GntR family transcriptional regu... 331 7e-89
gi|41410179|ref|NP_963015.1| hypothetical protein MAP4081 [Mycob... 311 5e-83
gi|254776986|ref|ZP_05218502.1| hypothetical protein MaviaA2_202... 309 3e-82
gi|120403925|ref|YP_953754.1| regulatory protein GntR [Mycobacte... 305 5e-81
gi|108799693|ref|YP_639890.1| GntR family transcriptional regula... 299 2e-79
gi|333990677|ref|YP_004523291.1| GntR family transcriptional reg... 293 1e-77
gi|118470474|ref|YP_887830.1| HTH-type transcriptional regulator... 288 4e-76
gi|126435337|ref|YP_001071028.1| GntR family transcriptional reg... 283 1e-74
gi|254823431|ref|ZP_05228432.1| regulatory protein GntR, HTH [My... 274 8e-72
gi|54022127|ref|YP_116369.1| putative transcriptional regulator ... 245 3e-63
gi|119714283|ref|YP_921248.1| GntR family transcriptional regula... 243 2e-62
gi|226303639|ref|YP_002763597.1| GntR family transcriptional reg... 222 4e-56
gi|229492823|ref|ZP_04386621.1| putative HTH-type transcriptiona... 221 6e-56
gi|111018059|ref|YP_701031.1| GntR family transcriptional regula... 217 2e-54
gi|226360187|ref|YP_002777965.1| GntR family transcriptional reg... 215 5e-54
gi|325676804|ref|ZP_08156477.1| GntR family transcriptional regu... 212 4e-53
gi|312139745|ref|YP_004007081.1| GntR family transcriptional reg... 211 8e-53
gi|262204306|ref|YP_003275514.1| GntR family transcriptional reg... 200 2e-49
gi|333919273|ref|YP_004492854.1| putative GntR family transcript... 179 3e-43
gi|343924426|ref|ZP_08763975.1| putative GntR family transcripti... 178 7e-43
gi|169630101|ref|YP_001703750.1| GntR family transcriptional reg... 174 9e-42
gi|149917131|ref|ZP_01905631.1| regulatory protein GntR, HTH [Pl... 152 3e-35
gi|218780566|ref|YP_002431884.1| GntR family transcriptional reg... 129 3e-28
gi|149925555|ref|ZP_01913819.1| regulatory protein GntR, HTH [Li... 127 2e-27
gi|256396558|ref|YP_003118122.1| GntR family transcriptional reg... 120 2e-25
gi|54023596|ref|YP_117838.1| putative transcriptional regulator ... 109 3e-22
gi|83591125|ref|YP_431134.1| GntR family transcriptional regulat... 95.1 8e-18
gi|218781019|ref|YP_002432337.1| GntR family transcriptional reg... 94.0 2e-17
gi|253699950|ref|YP_003021139.1| GntR family transcriptional reg... 90.5 2e-16
gi|197119276|ref|YP_002139703.1| GntR family transcriptional reg... 90.1 2e-16
gi|326201507|ref|ZP_08191378.1| GntR domain protein [Clostridium... 87.8 1e-15
gi|39996726|ref|NP_952677.1| GntR family transcriptional regulat... 87.8 1e-15
gi|29899145|gb|AAP03112.1| putative transcriptional regulator [S... 87.4 2e-15
gi|262199917|ref|YP_003271126.1| regulatory protein GntR HTH [Ha... 85.5 5e-15
gi|322420290|ref|YP_004199513.1| regulatory protein GntR HTH [Ge... 85.1 8e-15
gi|229827258|ref|ZP_04453327.1| hypothetical protein GCWU000182_... 85.1 8e-15
gi|183980844|ref|YP_001849135.1| GntR family transcriptional reg... 84.7 1e-14
gi|240171897|ref|ZP_04750556.1| putative transcriptional regulat... 84.3 1e-14
gi|147678567|ref|YP_001212782.1| transcriptional regulator [Pelo... 84.3 1e-14
gi|118619656|ref|YP_907988.1| GntR family transcriptional regula... 84.3 1e-14
gi|284042660|ref|YP_003393000.1| GntR family transcriptional reg... 84.3 1e-14
gi|15839886|ref|NP_334923.1| GntR family transcriptional regulat... 83.6 2e-14
gi|254230842|ref|ZP_04924169.1| hypothetical protein TBCG_00487 ... 83.2 3e-14
gi|315505771|ref|YP_004084658.1| regulatory protein GntR [Microm... 82.8 4e-14
gi|284041748|ref|YP_003392088.1| GntR family transcriptional reg... 82.4 6e-14
gi|323700681|ref|ZP_08112593.1| GntR domain protein [Desulfovibr... 82.0 6e-14
gi|148264251|ref|YP_001230957.1| GntR domain-containing protein ... 81.6 8e-14
gi|340029683|ref|ZP_08665746.1| GntR domain-containing protein [... 81.3 1e-13
>gi|15607726|ref|NP_215100.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
H37Rv]
gi|15839988|ref|NP_335025.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|31791768|ref|NP_854261.1| GntR family transcriptional regulator [Mycobacterium bovis AF2122/97]
80 more sequence titles
gi|121636504|ref|YP_976727.1| GntR family transcriptional regulator [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|148660355|ref|YP_001281878.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|148821788|ref|YP_001286542.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
F11]
gi|167969009|ref|ZP_02551286.1| hypothetical transcriptional regulatory protein, gntR-family
[Mycobacterium tuberculosis H37Ra]
gi|224988976|ref|YP_002643663.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253797520|ref|YP_003030521.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 1435]
gi|254230926|ref|ZP_04924253.1| hypothetical protein TBCG_00582 [Mycobacterium tuberculosis C]
gi|254363544|ref|ZP_04979590.1| hypothetical transcriptional regulatory protein (gntR-family)
[Mycobacterium tuberculosis str. Haarlem]
gi|254549541|ref|ZP_05139988.1| transcriptional regulator, gntR-family protein [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289441975|ref|ZP_06431719.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T46]
gi|289446139|ref|ZP_06435883.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
CPHL_A]
gi|289552839|ref|ZP_06442049.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 605]
gi|289568519|ref|ZP_06448746.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T17]
gi|289573186|ref|ZP_06453413.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
K85]
gi|289744300|ref|ZP_06503678.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
02_1987]
gi|289749083|ref|ZP_06508461.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T92]
gi|289752625|ref|ZP_06512003.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
gi|289756665|ref|ZP_06516043.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
T85]
gi|289760705|ref|ZP_06520083.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|294996098|ref|ZP_06801789.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
210]
gi|297633080|ref|ZP_06950860.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
KZN 4207]
gi|297730058|ref|ZP_06959176.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
KZN R506]
gi|298524073|ref|ZP_07011482.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|306774690|ref|ZP_07413027.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu001]
gi|306781580|ref|ZP_07419917.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu002]
gi|306783228|ref|ZP_07421550.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu003]
gi|306787600|ref|ZP_07425922.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu004]
gi|306794364|ref|ZP_07432666.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu005]
gi|306796334|ref|ZP_07434636.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu006]
gi|306802194|ref|ZP_07438862.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu008]
gi|306806401|ref|ZP_07443069.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu007]
gi|306966601|ref|ZP_07479262.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu009]
gi|306970794|ref|ZP_07483455.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu010]
gi|307078517|ref|ZP_07487687.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu011]
gi|307083081|ref|ZP_07492194.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu012]
gi|313657385|ref|ZP_07814265.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
KZN V2475]
gi|339630654|ref|YP_004722296.1| GntR family transcriptional regulator [Mycobacterium africanum
GM041182]
gi|54039981|sp|P67742.1|Y601_MYCBO RecName: Full=Uncharacterized HTH-type transcriptional regulator
Mb0601
gi|54042801|sp|P67741.1|Y586_MYCTU RecName: Full=Uncharacterized HTH-type transcriptional regulator
Rv0586/MT0615
gi|2222772|emb|CAB09952.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (GNTR-FAMILY) [Mycobacterium
tuberculosis H37Rv]
gi|13880130|gb|AAK44839.1| transcriptional regulator, GntR family [Mycobacterium tuberculosis
CDC1551]
gi|31617355|emb|CAD93463.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (GNTR-FAMILY) [Mycobacterium
bovis AF2122/97]
gi|121492151|emb|CAL70616.1| Probable transcriptional regulatory protein (gntR-family) [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124599985|gb|EAY58995.1| hypothetical protein TBCG_00582 [Mycobacterium tuberculosis C]
gi|134149058|gb|EBA41103.1| hypothetical transcriptional regulatory protein (gntR-family)
[Mycobacterium tuberculosis str. Haarlem]
gi|148504507|gb|ABQ72316.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|148720315|gb|ABR04940.1| hypothetical transcriptional regulatory protein, gntR-family
[Mycobacterium tuberculosis F11]
gi|224772089|dbj|BAH24895.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253319023|gb|ACT23626.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 1435]
gi|289414894|gb|EFD12134.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T46]
gi|289419097|gb|EFD16298.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
CPHL_A]
gi|289437471|gb|EFD19964.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 605]
gi|289537617|gb|EFD42195.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
K85]
gi|289542273|gb|EFD45921.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T17]
gi|289684828|gb|EFD52316.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
02_1987]
gi|289689670|gb|EFD57099.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T92]
gi|289693212|gb|EFD60641.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
gi|289708211|gb|EFD72227.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289712229|gb|EFD76241.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
T85]
gi|298493867|gb|EFI29161.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|308216589|gb|EFO75988.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu001]
gi|308325674|gb|EFP14525.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu002]
gi|308331896|gb|EFP20747.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu003]
gi|308335683|gb|EFP24534.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu004]
gi|308337262|gb|EFP26113.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu005]
gi|308343187|gb|EFP32038.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu006]
gi|308347054|gb|EFP35905.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu007]
gi|308350997|gb|EFP39848.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu008]
gi|308355631|gb|EFP44482.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu009]
gi|308359586|gb|EFP48437.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu010]
gi|308363514|gb|EFP52365.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu011]
gi|308367195|gb|EFP56046.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu012]
gi|323720938|gb|EGB30003.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A]
gi|326902418|gb|EGE49351.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
W-148]
gi|328457303|gb|AEB02726.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 4207]
gi|339293629|gb|AEJ45740.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
CCDC5079]
gi|339297270|gb|AEJ49380.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
CCDC5180]
gi|339330010|emb|CCC25665.1| putative transcriptional regulatory protein (GNTR-family) [Mycobacterium
africanum GM041182]
gi|341600520|emb|CCC63190.1| probable transcriptional regulatory protein (gntR-family) [Mycobacterium
bovis BCG str. Moreau RDJ]
gi|344218407|gb|AEM99037.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
CTRI-2]
Length=240
Score = 479 bits (1233), Expect = 1e-133, Method: Compositional matrix adjust.
Identities = 240/240 (100%), Positives = 240/240 (100%), Gaps = 0/240 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA
Sbjct 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA
Sbjct 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP
Sbjct 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVSQASRQ 240
TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVSQASRQ
Sbjct 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVSQASRQ 240
>gi|340625616|ref|YP_004744068.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|340003806|emb|CCC42932.1| putative transcriptional regulatory protein (GNTR-family) [Mycobacterium
canettii CIPT 140010059]
Length=240
Score = 476 bits (1225), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 239/240 (99%), Positives = 239/240 (99%), Gaps = 0/240 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA
Sbjct 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA
Sbjct 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP
Sbjct 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVSQASRQ 240
TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL SQASRQ
Sbjct 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLDSQASRQ 240
>gi|342858890|ref|ZP_08715544.1| GntR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342133131|gb|EGT86334.1| GntR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=240
Score = 331 bits (848), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 169/240 (71%), Positives = 192/240 (80%), Gaps = 0/240 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQPV RRSVPE VF+QIATDVL+GEM PG LPSERRLAE+ GVSRPAVREALKRLSA
Sbjct 1 MALQPVIRRSVPEAVFDQIATDVLSGEMQPGSPLPSERRLAEVFGVSRPAVREALKRLSA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
A LVEVRQG VTTVRDFRRHAGLDLLP+LLFR GELD +V RSILE RLR PKVAELAA
Sbjct 61 ASLVEVRQGGVTTVRDFRRHAGLDLLPQLLFRQGELDAAVFRSILETRLRIGPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
E++ PELA LLQDSLR L+ + P+ W R TL FWDH+VDS+GSIV RLMYN FRAAYE
Sbjct 121 EQHGPELAALLQDSLRRLEASQSPVEWHRDTLAFWDHMVDSSGSIVFRLMYNPFRAAYER 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVSQASRQ 240
L AL T M R YR+LA+AIC+GD A +AA+D+LELAN +++A L Q +R+
Sbjct 181 ALTALATAMNDEVNRADGYRELAEAICAGDAAEAGRAARDVLELANATMIAALHRQETRR 240
>gi|41410179|ref|NP_963015.1| hypothetical protein MAP4081 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399013|gb|AAS06631.1| hypothetical protein MAP_4081 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460599|gb|EGO39492.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis
S397]
Length=236
Score = 311 bits (797), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/233 (68%), Positives = 182/233 (79%), Gaps = 0/233 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQPV RRSVPE VF+QIATDVL+GE+P G ALPSERRLAE+ GVSRPAVREALKRLSA
Sbjct 1 MALQPVIRRSVPEAVFDQIATDVLSGELPAGSALPSERRLAEVFGVSRPAVREALKRLSA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
A LVEVRQG VTTVRDFRRHAGLDLLP+L+FR+GELD V RSILE RLR PKVAELAA
Sbjct 61 ASLVEVRQGGVTTVRDFRRHAGLDLLPQLVFRDGELDAGVFRSILETRLRIGPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
E++ PELA LL DSLR L+ + W R TL+FWDH+VDS+GSIV RLMYN FRAAYE
Sbjct 121 EQHGPELAALLDDSLRRLEASRSAVEWHRGTLEFWDHMVDSSGSIVFRLMYNPFRAAYER 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
+ L + A R YR LA AIC+GD A + A+++LELAN +++ L
Sbjct 181 AVGVLAAAIPAEINRTDAYRALAQAICAGDADEAGRGAREVLELANATMIGAL 233
>gi|254776986|ref|ZP_05218502.1| hypothetical protein MaviaA2_20276 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=236
Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/233 (68%), Positives = 181/233 (78%), Gaps = 0/233 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQPV RRSVPE VF+QIATDVL+GE+P G ALPSERRLAE+ GVSRPAVREALKRLSA
Sbjct 1 MALQPVIRRSVPEAVFDQIATDVLSGELPAGSALPSERRLAEVFGVSRPAVREALKRLSA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
A LVEVR G VTTVRDFRRHAGLDLLP+L+FR+GELD V RSILE RLR PKVAELAA
Sbjct 61 ASLVEVRHGGVTTVRDFRRHAGLDLLPQLVFRDGELDAGVFRSILETRLRIGPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
E++ PELA LL DSLR L+ + W R +L+FWDH+VDS+GSIV RLMYN FRAAYE
Sbjct 121 EQHGPELAVLLDDSLRRLEASHSAVEWHRGSLEFWDHMVDSSGSIVFRLMYNPFRAAYER 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
L L + A R YR LA AIC+GD A + A+++LELAN +++ L
Sbjct 181 ALGVLAAAIPAEINRTDAYRALAQAICAGDADEAGRGAREVLELANATMIGAL 233
>gi|120403925|ref|YP_953754.1| regulatory protein GntR [Mycobacterium vanbaalenii PYR-1]
gi|119956743|gb|ABM13748.1| transcriptional regulator, GntR family [Mycobacterium vanbaalenii
PYR-1]
Length=240
Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/233 (67%), Positives = 182/233 (79%), Gaps = 0/233 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MAL+PV RRSVPE+VF+QI +DVL+GEM PGE LPSERRLAE+LGVSRPA+REALKRL+A
Sbjct 1 MALRPVNRRSVPEDVFDQIISDVLSGEMRPGETLPSERRLAEVLGVSRPAIREALKRLAA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGL+EVRQGD TTVRDFRR AGLDLLPRLL R+G+LD++VVRSILE RL N PKVAELAA
Sbjct 61 AGLIEVRQGDATTVRDFRRTAGLDLLPRLLIRDGDLDLAVVRSILETRLHNGPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
+R PEL++ L ++RAL E DP+ QRH LDFWDH+VD A SI RLM+N RA YEP
Sbjct 121 QRRGPELSDELNTAMRALADEADPVAAQRHALDFWDHIVDGADSIAFRLMFNTLRATYEP 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
L AL T M A R YR +A+A+ +GDP A+ A LLE A T+L+ L
Sbjct 181 ALPALATMMAAEVGRVDAYRAVAEAVLAGDPAAARDNAHRLLEPATTALLDAL 233
>gi|108799693|ref|YP_639890.1| GntR family transcriptional regulator [Mycobacterium sp. MCS]
gi|119868803|ref|YP_938755.1| GntR family transcriptional regulator [Mycobacterium sp. KMS]
gi|108770112|gb|ABG08834.1| transcriptional regulator, GntR family [Mycobacterium sp. MCS]
gi|119694892|gb|ABL91965.1| transcriptional regulator, GntR family [Mycobacterium sp. KMS]
Length=239
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/233 (67%), Positives = 177/233 (76%), Gaps = 0/233 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQPV RRSVPE+VF+QI T+VL+G+M PG+ LPSERRLAE+LGVSRPA+REALKRL+
Sbjct 1 MALQPVNRRSVPEDVFDQIVTEVLSGQMQPGQTLPSERRLAEVLGVSRPAIREALKRLAG 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGL+EVRQGD TTVRDFRR AGLDLLPRLL R GELD++VVRSILE RL N PKVAELAA
Sbjct 61 AGLIEVRQGDATTVRDFRRTAGLDLLPRLLIRGGELDLTVVRSILETRLHNGPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
ER P LAE L +++ AL+ E DP+ Q+ L FWDHVVD A SI RLMYN RA YEP
Sbjct 121 ERGGPGLAERLDETVDALEAETDPVAAQQLALTFWDHVVDGADSIAFRLMYNTLRATYEP 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
L AL T M RP YR + AI + DP GA AA+ LLE A T+L+ L
Sbjct 181 ALPALATMMAEEVGRPDAYRAVTAAIVARDPAGAADAARRLLEPATTALLDAL 233
>gi|333990677|ref|YP_004523291.1| GntR family transcriptional regulator [Mycobacterium sp. JDM601]
gi|333486645|gb|AEF36037.1| GntR family transcriptional regulator [Mycobacterium sp. JDM601]
Length=240
Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/233 (64%), Positives = 177/233 (76%), Gaps = 0/233 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MAL+ VTRRSVPE VFEQI ++VL+GEM PGE LP+ERRLAE+LGVSRPAVREAL RL+A
Sbjct 1 MALRQVTRRSVPEHVFEQIMSEVLSGEMAPGEVLPNERRLAEVLGVSRPAVREALTRLNA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGL+EVR GD TTVRD+RRHAGLDLLPRLL R ELD+ VVRSILEARL N PKVAELAA
Sbjct 61 AGLIEVRHGDATTVRDYRRHAGLDLLPRLLVRGEELDLEVVRSILEARLHNGPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
+R+ P+ A +L ++ AL E DP+ QR L FWDHVVD+A SIV RLM+N R YEP
Sbjct 121 QRSGPQAAAVLNGAVDALVAEADPVQRQRAALTFWDHVVDAADSIVFRLMFNTLRVTYEP 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
L AL T M P Y+++A AI +GDP GA++AA +LL A +L+ L
Sbjct 181 ALEALATVMAVEVSHPQPYQRVAQAIAAGDPAGARRAAVELLAPATDALLTAL 233
>gi|118470474|ref|YP_887830.1| HTH-type transcriptional regulator [Mycobacterium smegmatis str.
MC2 155]
gi|118171761|gb|ABK72657.1| putative HTH-type transcriptional regulator [Mycobacterium smegmatis
str. MC2 155]
Length=243
Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/233 (67%), Positives = 172/233 (74%), Gaps = 0/233 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQPV RRSVPE+VFEQI ++VLTGEM PGE+LPSERRLAE+LGVSRPAVREA+KRL+A
Sbjct 4 MALQPVNRRSVPEDVFEQIVSEVLTGEMRPGESLPSERRLAEVLGVSRPAVREAIKRLTA 63
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGLVEVRQGD TTVRDFRRHAG+DLLPRLLFR GELD SVVRSILE RL N PKVAELAA
Sbjct 64 AGLVEVRQGDATTVRDFRRHAGMDLLPRLLFRAGELDTSVVRSILETRLHNGPKVAELAA 123
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
ER EL L + AL+ E DPI QRH + FWDHVVD A SI RLM+N R YEP
Sbjct 124 ERRGAELVGQLTAVVHALEAEIDPIQRQRHAMTFWDHVVDGADSIAFRLMFNTLRETYEP 183
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
L AL M P YR + AI D A+ AAQ+LLE A +L+ L
Sbjct 184 VLPALAAVMAGEVADPDAYRAITRAISDRDADAARGAAQNLLEPATHALLGAL 236
>gi|126435337|ref|YP_001071028.1| GntR family transcriptional regulator [Mycobacterium sp. JLS]
gi|126235137|gb|ABN98537.1| transcriptional regulator, GntR family [Mycobacterium sp. JLS]
Length=239
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/233 (66%), Positives = 175/233 (76%), Gaps = 0/233 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQPV RRSVPE+VF+QI T+VL+G+M PG+ LPSERRLAE+LGVSRPA+REALKRL+
Sbjct 1 MALQPVNRRSVPEDVFDQIVTEVLSGQMQPGQTLPSERRLAEVLGVSRPAIREALKRLAG 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGL+EVRQGD TTVRDFRR AGLDLLPRLL R GELD++VVRSILE RL N PKVAELAA
Sbjct 61 AGLIEVRQGDATTVRDFRRTAGLDLLPRLLMRGGELDLTVVRSILETRLHNGPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
ER P LA L +++ AL TE DP+ Q+ L FWDHVVD A SI RLMYN RA YEP
Sbjct 121 ERGGPSLAGRLDETVDALLTETDPVAAQQLALTFWDHVVDGADSIAFRLMYNTLRATYEP 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
L AL M RP YR + AI + DP GA AA+ LLE A T+L+ L
Sbjct 181 ALPALAAMMAEEVGRPDAYRAVTAAIVARDPAGAADAARRLLEPATTALLDAL 233
>gi|254823431|ref|ZP_05228432.1| regulatory protein GntR, HTH [Mycobacterium intracellulare ATCC
13950]
Length=285
Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 155/234 (67%), Positives = 181/234 (78%), Gaps = 4/234 (1%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MAL+PVTR+S+P+ VFEQI +DVL+GE+ PGE LPSERRLAE+LGVSRP VREALKRL+A
Sbjct 1 MALRPVTRQSIPDHVFEQIMSDVLSGELAPGELLPSERRLAEVLGVSRPVVREALKRLTA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLF----RNGELDISVVRSILEARLRNFPKVA 116
AGLVEVRQGD TTVRD++RHAGLDLLPRLL R ELD++VVRSILE RL N PKVA
Sbjct 61 AGLVEVRQGDATTVRDYKRHAGLDLLPRLLLRGGDRGDELDVAVVRSILETRLHNGPKVA 120
Query 117 ELAAERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRA 176
ELAAER P+ A +L+ ++ AL EEDP QR L FWDHVVD+A SIV RLM+N RA
Sbjct 121 ELAAERGGPQAASVLEAAVDALVAEEDPTERQRAALTFWDHVVDAADSIVFRLMFNTLRA 180
Query 177 AYEPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLM 230
YEP L AL T M A RP YR++A AI +GDP GAK+AA +LLE A L+
Sbjct 181 TYEPALPALDTVMAAEVNRPELYRQVAQAITAGDPVGAKRAATELLEPATRGLL 234
>gi|54022127|ref|YP_116369.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54013635|dbj|BAD55005.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=270
Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/229 (63%), Positives = 164/229 (72%), Gaps = 2/229 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQPV +RSV +VFEQIA +VL+GE PG ALPSER+LAE LGVSRPAVREAL+RL+A
Sbjct 1 MALQPVVKRSVSADVFEQIAAEVLSGERAPGSALPSERQLAEALGVSRPAVREALQRLAA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGLV VRQGD TTV D+RR AGL++LPRLL R G LD +V RSILEARL N PKVAELAA
Sbjct 61 AGLVAVRQGDTTTVLDYRRGAGLEILPRLLIRQGTLDPTVARSILEARLHNGPKVAELAA 120
Query 121 ER--NEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAY 178
R + L L L AL E +P+ QRH L FWDH+VD+A SIV RLM N RAAY
Sbjct 121 ARAGDREALRHELNRCLDALARETEPVALQRHALAFWDHLVDAADSIVFRLMNNMLRAAY 180
Query 179 EPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANT 227
EP L AL MTA + YR +A+A+ + DP A AA+ LLE A T
Sbjct 181 EPALEALAPLMTAEVGNVAGYRAIAEAVLAADPPAATAAARALLEPATT 229
>gi|119714283|ref|YP_921248.1| GntR family transcriptional regulator [Nocardioides sp. JS614]
gi|119534944|gb|ABL79561.1| transcriptional regulator, GntR family [Nocardioides sp. JS614]
Length=249
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/240 (58%), Positives = 168/240 (70%), Gaps = 0/240 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M LQPV RRSVP+EVF+Q+ ++V+ G + GEALPSERRLAE+LGVSRPAVREAL+R++
Sbjct 7 MPLQPVNRRSVPDEVFDQVLSEVVDGGIGAGEALPSERRLAEVLGVSRPAVREALQRMAQ 66
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
L++VR G TTVRDFRR+ GLDLLPRLL R GELD +V RSILEARL P VA LAA
Sbjct 67 TRLLDVRHGGATTVRDFRRYGGLDLLPRLLVRRGELDPAVARSILEARLVVGPGVAALAA 126
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
ER P L +L +++ AL+ ED I QRH L FWD VVD+A S+V RLM+N+ RAAYEP
Sbjct 127 ERGGPALEPVLAETVAALEGTEDGIERQRHALAFWDLVVDAADSMVFRLMFNSLRAAYEP 186
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVSQASRQ 240
L AL M + YR L AI +GDP A+ AA +L A TSL+ L + S Q
Sbjct 187 ALEALAALMAEEVGQVGAYRLLTAAIGAGDPETARAAADRVLRPATTSLLTALAALDSDQ 246
>gi|226303639|ref|YP_002763597.1| GntR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|226182754|dbj|BAH30858.1| putative GntR family transcriptional regulator [Rhodococcus erythropolis
PR4]
Length=240
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/227 (53%), Positives = 152/227 (67%), Gaps = 0/227 (0%)
Query 3 LQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAG 62
QPV R S VF+QI+ VL GE+ GEALPSER+LAE GVSRPAVREA+++L+ AG
Sbjct 2 FQPVARTSASGAVFDQISVKVLAGELAAGEALPSERKLAEAFGVSRPAVREAIQKLAQAG 61
Query 63 LVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAAER 122
LVEVRQG+ T+VRDFRR AG +LLP+LL R+G D++VVRS+LE R P++A LAA R
Sbjct 62 LVEVRQGESTSVRDFRRQAGPELLPQLLVRDGVPDLTVVRSVLETRELMGPQIAVLAARR 121
Query 123 NEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPTL 182
E A L ++ L EDP+ Q L FWD VVDSA SI RL++N+ RAAYEP +
Sbjct 122 ISAESARELDTAVDQLGATEDPVELQDRALAFWDVVVDSADSIAFRLIFNSLRAAYEPAM 181
Query 183 AALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSL 229
AL + M A + YRKLA AI S D + A+ +A LL T++
Sbjct 182 TALASVMVAEVGQTDLYRKLASAITSHDESTAEASAAQLLHTGTTAI 228
>gi|229492823|ref|ZP_04386621.1| putative HTH-type transcriptional regulator [Rhodococcus erythropolis
SK121]
gi|229320263|gb|EEN86086.1| putative HTH-type transcriptional regulator [Rhodococcus erythropolis
SK121]
Length=240
Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/227 (54%), Positives = 151/227 (67%), Gaps = 0/227 (0%)
Query 3 LQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAG 62
QPV R S VF+QI+ VL GE+ GEALPSER+LAE GVSRPAVREA+++L+ AG
Sbjct 2 FQPVARTSASGAVFDQISVKVLAGELAAGEALPSERKLAEAFGVSRPAVREAIQKLAQAG 61
Query 63 LVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAAER 122
LVEVRQG+ T+VRDFRR AG +LLP+LL R+G D+SVVRS+LE R P++A LAA R
Sbjct 62 LVEVRQGESTSVRDFRRQAGPELLPQLLVRDGVPDLSVVRSVLETRELMGPQIAVLAARR 121
Query 123 NEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPTL 182
E A L ++ L EDP+ Q L FWD VVDSA SI RL++N+ RAAYEP +
Sbjct 122 ISAESARELDTTVDQLGATEDPVELQDRALAFWDVVVDSADSIAFRLIFNSLRAAYEPAM 181
Query 183 AALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSL 229
AL + M A + YRKLA AI S D A+ +A LL T++
Sbjct 182 TALASVMVAEVGQTDLYRKLASAITSHDEPTAETSAAQLLHTGTTAI 228
>gi|111018059|ref|YP_701031.1| GntR family transcriptional regulator [Rhodococcus jostii RHA1]
gi|110817589|gb|ABG92873.1| transcriptional regulator, GntR family protein [Rhodococcus jostii
RHA1]
Length=247
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/233 (49%), Positives = 155/233 (67%), Gaps = 0/233 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M +P+ R+S EVF+QI VL G++ G+ALPSERRLAE GVSRPA+REA+++L+
Sbjct 3 MMFEPIARKSASTEVFDQITARVLGGDLAAGDALPSERRLAEAFGVSRPAIREAIQKLAQ 62
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGLVEVRQGD T+VRDFR+H G +LL +LL R+G D +VVRS+LEAR +VA LAA
Sbjct 63 AGLVEVRQGDATSVRDFRQHGGPELLSQLLVRDGVPDWAVVRSVLEARRMIGVQVARLAA 122
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
R E L+D++ L ++ DP+ Q L FW+ VVD+A SI RL++N+ R AYEP
Sbjct 123 GRATDESGAALRDAVDHLASDSDPVAQQVGALAFWERVVDTADSIAFRLIFNSLRNAYEP 182
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
T+ A+ M A R Y +LA+AI + D A + A LL+L ++ +V+
Sbjct 183 TMTAMAAVMVAEVGRTDLYHQLAEAISAHDEVAAAQTATTLLDLGTAAVTSVI 235
>gi|226360187|ref|YP_002777965.1| GntR family transcriptional regulator [Rhodococcus opacus B4]
gi|226238672|dbj|BAH49020.1| putative GntR family transcriptional regulator [Rhodococcus opacus
B4]
Length=245
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/233 (50%), Positives = 154/233 (67%), Gaps = 0/233 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M +P+ R+S EVF+QI VL G++ GEALPSERRLAE GVSRPAVREA+++L+
Sbjct 1 MMFEPIARKSASTEVFDQITARVLGGDLAAGEALPSERRLAEAFGVSRPAVREAIQKLAQ 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGLVEVRQGD T+VRDFR+H G +LL +LL R G D +VVRS+LEAR +VA LAA
Sbjct 61 AGLVEVRQGDATSVRDFRQHGGPELLSQLLIRGGVPDWAVVRSVLEARRMIGVQVARLAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
+R + L+++ L +E DP+ Q L FW+ VVD+A SI RL++N+ R AYEP
Sbjct 121 DRATEKSGTALREAADHLASETDPVAQQVGALAFWERVVDTADSIAFRLIFNSLRNAYEP 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
T+ A+ M A R Y +LA+AI + D A + A LL+L ++ AV+
Sbjct 181 TMTAMAAVMVAEVGRADLYHQLAEAISAHDEDLAAQTAATLLDLGTAAVTAVI 233
>gi|325676804|ref|ZP_08156477.1| GntR family transcriptional regulator [Rhodococcus equi ATCC
33707]
gi|325552352|gb|EGD22041.1| GntR family transcriptional regulator [Rhodococcus equi ATCC
33707]
Length=244
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/235 (55%), Positives = 155/235 (66%), Gaps = 0/235 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M L PV RRS+P++VF+Q+ V+ G + PGE L SERR+AE LGVSRPAVREAL R++A
Sbjct 1 MDLTPVQRRSIPDDVFDQLLGRVVDGRVAPGETLLSERRMAEALGVSRPAVREALGRIAA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
GLV+VRQG T V D RR GLDLLPRLL R GE+D +V SILEARL N PKVAELAA
Sbjct 61 MGLVDVRQGGATVVNDLRRRGGLDLLPRLLVRGGEIDPAVAHSILEARLWNGPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
+R A++L ++ AL ++D + QR LDFWD VVD A SI RLM+N R+AYEP
Sbjct 121 QRAPEGTADVLDSAVDALAADDDSVARQRIALDFWDLVVDGADSITFRLMFNTLRSAYEP 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVS 235
+ AL M A YR + DAI D A AA LLE A T L + LV+
Sbjct 181 MIDALAMVMAAEVNESDRYRAITDAIRRRDRPAAFAAAHALLEPATTLLGSALVA 235
>gi|312139745|ref|YP_004007081.1| GntR family transcriptional regulator [Rhodococcus equi 103S]
gi|311889084|emb|CBH48397.1| putative GntR family transcriptional regulator [Rhodococcus equi
103S]
Length=244
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 129/235 (55%), Positives = 154/235 (66%), Gaps = 0/235 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M L PV RRS+P++VF+Q+ V+ G + PGE L SERR+AE LGVSRPAVREAL R++A
Sbjct 1 MDLTPVQRRSIPDDVFDQLLGRVVDGRVAPGETLLSERRMAEALGVSRPAVREALGRIAA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
GLV+VRQG T V D RR GLDLLPRLL R GE+D +V SILEARL N PKVAELAA
Sbjct 61 MGLVDVRQGGATVVNDLRRRGGLDLLPRLLVRGGEIDPAVAHSILEARLWNGPKVAELAA 120
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
+R A++L ++ AL +DP+ QR LDFWD VVD A SI RLM+N R AYEP
Sbjct 121 QRAPGGTADVLDSAVDALAAADDPVARQRIALDFWDLVVDGADSITFRLMFNTLRRAYEP 180
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVS 235
+ AL M A YR + DAI D A AA LLE A T L + LV+
Sbjct 181 MIDALAMVMAAEVNESDRYRAITDAIRRRDREAAFAAAHALLEPATTLLGSALVA 235
>gi|262204306|ref|YP_003275514.1| GntR family transcriptional regulator [Gordonia bronchialis DSM
43247]
gi|262087653|gb|ACY23621.1| regulatory protein GntR HTH [Gordonia bronchialis DSM 43247]
Length=252
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/230 (52%), Positives = 143/230 (63%), Gaps = 0/230 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M +PV RSVP +V+EQI T VL+GE+ G LPSER LA +LGVSRPAVREAL R++A
Sbjct 7 MPFEPVAPRSVPTDVYEQIVTGVLSGELAVGATLPSERELARILGVSRPAVREALGRVAA 66
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGLV +RQG T V D GLDLLPRLL R+GELD V RS++EAR P+VAELAA
Sbjct 67 AGLVSIRQGGSTKVLDPAVAGGLDLLPRLLVRDGELDPRVARSVVEARALVGPEVAELAA 126
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
R ++ L L L E D I Q L+FW V+D+A SI RLMYN+ RAAYEP
Sbjct 127 RRAAADVVPALSAILDELAAEPDSIAQQVIALEFWSRVIDAADSIAFRLMYNSLRAAYEP 186
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLM 230
L L + YR + DAI + DP A AA+ LL A +L+
Sbjct 187 ALPVLAAVLEPEIANIGGYRAVVDAIAARDPARAGTAARALLTPATDALL 236
>gi|333919273|ref|YP_004492854.1| putative GntR family transcriptional regulator [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481494|gb|AEF40054.1| Putative GntR family transcriptional regulator [Amycolicicoccus
subflavus DQS3-9A1]
Length=240
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/234 (48%), Positives = 147/234 (63%), Gaps = 1/234 (0%)
Query 3 LQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAG 62
+ + R S VF+QI+ VL+GE+ PG+ LPSERRLAE GVSRPA+REA+++LS AG
Sbjct 2 FEAIARTSTSAAVFDQISARVLSGELAPGDDLPSERRLAEAFGVSRPAIREAIQKLSQAG 61
Query 63 LVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAAER 122
LVEVRQGD T+VRD+R HAG +LLP+LL GE D++V S++EAR KVAELAA+R
Sbjct 62 LVEVRQGDATSVRDYRAHAGPELLPQLLLPQGEPDVAVALSVVEARQIVGVKVAELAAQR 121
Query 123 NEPELAELLQDSLRALDT-EEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPT 181
+ A L ++ A+++ D I Q L FWD VVDSA SI RL++N+ R+AYEP
Sbjct 122 VTADQAARLHNAAAAMESPNADTIDLQFRALGFWDAVVDSADSIAFRLIFNSLRSAYEPM 181
Query 182 LAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVLVS 235
+ L M A Y LA AI + D A+ LL +L +VL S
Sbjct 182 ITVLAPVMEAEVSNADAYHNLATAIAANDHQLTSTRAEALLSAGTLALSSVLNS 235
>gi|343924426|ref|ZP_08763975.1| putative GntR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
gi|343765570|dbj|GAA10901.1| putative GntR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
Length=259
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/232 (51%), Positives = 146/232 (63%), Gaps = 0/232 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M +PVT++S PE VF+QI VL+G++ GEALPSER LA +LGVSRP VREALKR++A
Sbjct 7 MPFEPVTQQSAPEIVFDQIVEGVLSGDLAAGEALPSERELARMLGVSRPTVREALKRVAA 66
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
AGLV +RQGD ++D R GLDLLPRLL R G L V RSI+EAR P+VA LAA
Sbjct 67 AGLVTIRQGDGARIQDIARTGGLDLLPRLLLRGGALVPGVARSIIEARAAVGPEVARLAA 126
Query 121 ERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEP 180
R ++ L L E DPI Q L+FW VVD+ SI RLMYN+ RAAYEP
Sbjct 127 RRATDNDLVAIRAVLDHLAAESDPIGQQVAALEFWSAVVDAGDSIAFRLMYNSLRAAYEP 186
Query 181 TLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAV 232
+ AL + YR L D I + +P A+ AA+ LLE A +L+AV
Sbjct 187 AVPALAGVLEPEVGNIEGYRALVDTIAAHEPERAEVAARALLEPATATLLAV 238
>gi|169630101|ref|YP_001703750.1| GntR family transcriptional regulator [Mycobacterium abscessus
ATCC 19977]
gi|169242068|emb|CAM63096.1| Putative transcriptional regulator, GntR family [Mycobacterium
abscessus]
Length=242
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 96/204 (48%), Positives = 131/204 (65%), Gaps = 6/204 (2%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
MALQP+ R+S+P+E+F Q+A VLTG+ PG+ LPSER LAE LGVSR AVREAL RL
Sbjct 1 MALQPIARQSIPDEIFSQLAAQVLTGDRIPGDTLPSERALAEALGVSRAAVREALGRLER 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
+GL+++RQG T +RD+R AG D+LP LL G++D + S++EAR P+VA LAA
Sbjct 61 SGLIQIRQGGSTVIRDYRSDAGFDVLPLLLAYGGDVDRRTLASVIEARAIIGPQVARLAA 120
Query 121 ER--NEPELAELLQDSLRALDTEEDPI--VWQRHTLDFWDHVVDSAGSIVDRLMYNAFRA 176
+R P +A+ L+ L+ E+DP+ +WQ L FW+ V+D+A SI RL++N R
Sbjct 121 QRAHQTPGVADRLRAMTSELEAEDDPLQRMWQ--ALGFWELVIDTADSIAFRLVFNTMRD 178
Query 177 AYEPTLAALTTTMTAAAKRPSDYR 200
+Y L L M A YR
Sbjct 179 SYVRALDVLVNVMAAEVGDIGHYR 202
>gi|149917131|ref|ZP_01905631.1| regulatory protein GntR, HTH [Plesiocystis pacifica SIR-1]
gi|149822047|gb|EDM81440.1| regulatory protein GntR, HTH [Plesiocystis pacifica SIR-1]
Length=267
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/249 (41%), Positives = 135/249 (55%), Gaps = 16/249 (6%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
+ L+PV R S+ + VFEQ+ +LT + PG+ LPSER LA L V+R A+REALKRLS
Sbjct 7 LELEPVPRSSLSDGVFEQLCASILTHRLTPGDTLPSERELATTLQVNRGAIREALKRLSQ 66
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFR-NGELDISVVRSILEARLRNFPKVAELA 119
AGLVE R G T VRD+RR A L LLPRLLF +GE ++ V RSI+E R P +A L
Sbjct 67 AGLVEQRHGGGTFVRDYRRSADLSLLPRLLFSPDGEANLPVARSIMEMRAALAPDIARLC 126
Query 120 AERNEPELAELLQDSL----RALDT-EEDPIV----------WQRHTLDFWDHVVDSAGS 164
AER PEL + + + RA + DP + Q +L+ WD +V A +
Sbjct 127 AERRSPELLASIDEHVAQLARAFEALPADPSLAAPAARELEPLQLLSLELWDRIVQGADN 186
Query 165 IVDRLMYNAFRAAYEPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLEL 224
I RL +N R YE AL + Y +L DAI D A +AA +++L
Sbjct 187 IAYRLAFNTLRQTYEQIRDALLLPLAKELCAIDRYIELLDAIRHQDGFAAHRAATAIVQL 246
Query 225 ANTSLMAVL 233
+ + A
Sbjct 247 GSGGMNAAF 255
>gi|218780566|ref|YP_002431884.1| GntR family transcriptional regulator [Desulfatibacillum alkenivorans
AK-01]
gi|218761950|gb|ACL04416.1| regulatory protein GntR HTH [Desulfatibacillum alkenivorans AK-01]
Length=238
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/235 (35%), Positives = 120/235 (52%), Gaps = 8/235 (3%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M ++PV ++S+ +VF QI +L + PG+ LPSER L +L+ ++R +VREALKRL
Sbjct 1 MQIKPVEKQSLSNQVFNQIRDFILNEQYRPGDKLPSERELCDLMQINRSSVREALKRLEQ 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
A L+E+R G+ + V DF+ H G DL+ ++ L+ +RS+ E R ++A LAA
Sbjct 61 ARLIEIRHGEGSVVLDFKYHGGFDLIRHMVEPGKPLNYLAIRSLCEVRSLVCTEIARLAA 120
Query 121 ER-NEPELAELL----QDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFR 175
R EPEL EL Q + D E D +Q +F + ++ ++ LM N+ R
Sbjct 121 LRIKEPELEELAGIVGQMKICVQDGEGD---FQSLDFEFHYTLAKASENVAFLLMLNSIR 177
Query 176 AAYEPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLM 230
Y P A + T A P Y + A+ GD A L+E N M
Sbjct 178 EVYLPMAQAFSAMFTHVAGDPGVYEDIYQAVKGGDSQEAGNLTHQLIEEGNRIFM 232
>gi|149925555|ref|ZP_01913819.1| regulatory protein GntR, HTH [Limnobacter sp. MED105]
gi|149825672|gb|EDM84880.1| regulatory protein GntR, HTH [Limnobacter sp. MED105]
Length=235
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/232 (35%), Positives = 124/232 (54%), Gaps = 1/232 (0%)
Query 3 LQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAG 62
++ + + S+ E+V+ Q+ +L +P G LPSER L+E LGV+R AVREA+KRL A
Sbjct 1 MENIQKISISEQVYTQLRDRILKKVLPVGAELPSERELSETLGVNRGAVREAIKRLQQAR 60
Query 63 LVEVRQGDVTTVRDFRRHAGLDLLPRLLFR-NGELDISVVRSILEARLRNFPKVAELAAE 121
LV VR G T V +F GL+LLP L+ G++++ V R I+ R P VA AA+
Sbjct 61 LVRVRHGGATQVENFEAEGGLELLPGLMVNTQGQINLEVARGIVALRKALAPVVAGQAAQ 120
Query 122 RNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPT 181
LA+ L+ + + T + Q+ DFW VV +G++V +L +N+ Y
Sbjct 121 HGGKTLADTLKPVIAEMQTTSELPRLQQLAFDFWALVVQGSGNVVFKLAFNSMNQTYLAA 180
Query 182 LAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
LT M + + +LA AI +G+ + A+ +EL + +L A L
Sbjct 181 WHTLTLVMQDEFRDVNTLAQLAQAIEAGEQRRCEVLARQHVELGSRALNAAL 232
>gi|256396558|ref|YP_003118122.1| GntR family transcriptional regulator [Catenulispora acidiphila
DSM 44928]
gi|256362784|gb|ACU76281.1| regulatory protein GntR HTH [Catenulispora acidiphila DSM 44928]
Length=237
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/232 (42%), Positives = 119/232 (52%), Gaps = 12/232 (5%)
Query 5 PVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLV 64
PV R SV VFEQI +L G + PG ALPSER L LGV+R VREAL+RL GLV
Sbjct 12 PVVRSSVAAAVFEQILGRILDGSLDPGSALPSERALTLELGVTRQVVREALQRLDQLGLV 71
Query 65 EVRQGDVTTVRDFRRHAGLDLLPRLLFR-NGELDISVVRSILEARLRNFPKVAELAAERN 123
E+R G T V D+R AGLDLLPRL R +G LD VVRS++E R A A
Sbjct 72 EIRHGGGTRVLDYRDAAGLDLLPRLFRRADGSLDAEVVRSVMEMRQ------AVGADAAA 125
Query 124 EPELAELLQDSLRALDTEEDPIVWQRHTLD--FWDHVVDSAGSIVDRLMYNAFRAAYEPT 181
L LR E + H L+ FWD +VD + +I RL NA R AY P
Sbjct 126 LCALRLADTAGLRRAVAEG---AGRGHDLESVFWDLIVDGSQNICYRLSLNALRQAYAPA 182
Query 182 LAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
A + + Y + AI + DP A+ AA +LL L ++ A L
Sbjct 183 AALVADVLADEITAVRRYEDVIAAIEARDPERARAAAGELLGLGTAAITAFL 234
>gi|54023596|ref|YP_117838.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54015104|dbj|BAD56474.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=241
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/230 (38%), Positives = 116/230 (51%), Gaps = 13/230 (5%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M V R +V + VF Q+ +LTG + P E LP+ER LAE V+R AVREALKR+
Sbjct 1 MEFAVVGRTAVSDAVFGQLVDAILTGRIAPDEPLPAERELAETFQVNRHAVREALKRVQQ 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDIS-VVRSILEARLRNFPKVAELA 119
+GLV V QG T V D+R + GLDLL L R+G + ++R I E R A L
Sbjct 61 SGLVRVAQGGKTRVLDWRANGGLDLLS-ALARSGSVPAQRILRDIAEMRRSVAADSARLC 119
Query 120 AERNEPELAELLQDSLRAL---DTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRA 176
AER EP + + + A D ++ L FW V+D +G++ RL N A
Sbjct 120 AERAEPRRVDTIVAAAAAYPEPTAALDDLI--SGDLAFWTAVIDGSGNLAYRLALNTLVA 177
Query 177 AYEPTLAALTTTMTAAAKRP----SDYRKLADAICSGDPTGAKKAAQDLL 222
Y T T + R + +R+LAD I + DP GA + A LL
Sbjct 178 GY--TDIGWETIVRLGLNREYLDRARHRELADRIAARDPEGAHRHAHALL 225
>gi|83591125|ref|YP_431134.1| GntR family transcriptional regulator [Moorella thermoacetica
ATCC 39073]
gi|83574039|gb|ABC20591.1| transcriptional regulator, GntR family [Moorella thermoacetica
ATCC 39073]
Length=233
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/222 (33%), Positives = 121/222 (55%), Gaps = 9/222 (4%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M L+P+ + + EE+ +QI + G + PG+ LPSER L+E L VSR +VREAL L+A
Sbjct 1 MDLRPIRTKKIYEEIVQQIKDLIGEGNLKPGDRLPSERELSERLAVSRASVREALSALAA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
G++ +R G+ T V++ R A ++ L L LD +LEAR + A LAA
Sbjct 61 MGVIVIRPGEGTFVQNIRNGAIVEPLAMALL----LDRQAAMELLEARQALEGEAAYLAA 116
Query 121 ERNEPELAELLQDSLRALDTE-EDPIVWQRHTLDFWDHVVDSA-GSIVDRLMY---NAFR 175
R PE E +++ L+ ++ + + I+ + L F + ++A S++ RLM+ + R
Sbjct 117 RRAGPEDLEKMEELLKEMEHDLQRGILGEEADLRFHLAIAEAARNSVLARLMHTVSDTMR 176
Query 176 AAYEPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKA 217
A + + L TT K + + ++ +AI + DP A+KA
Sbjct 177 QALKTSRQRLYTTAGNPEKLFAQHNQIYEAIKAHDPRAARKA 218
>gi|218781019|ref|YP_002432337.1| GntR family transcriptional regulator [Desulfatibacillum alkenivorans
AK-01]
gi|218762403|gb|ACL04869.1| regulatory protein GntR HTH [Desulfatibacillum alkenivorans AK-01]
Length=235
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/214 (33%), Positives = 105/214 (50%), Gaps = 8/214 (3%)
Query 17 EQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLVEVRQGDVTTVRD 76
QI T +L G+ PPG LP ER LA+ LGV+RP +RE L RL+A G + +R G T V D
Sbjct 15 NQILTAILEGKYPPGACLPGERALAQELGVTRPTLRETLHRLAAEGWIAIRHGKPTIVND 74
Query 77 FRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAAERNEPELAELLQDSLR 136
+ GL LL + L + + +LE RL P VA +A+ERN +LA L + +
Sbjct 75 YWTKGGLGLLSTMARYGQFLPKNFIVHLLELRLVLIPSVAAMASERNPEDLARHLALA-K 133
Query 137 ALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPTLAALTTTMTAAAKRP 196
LD +DP + ++ + + ++ + ++ N F ++ + A
Sbjct 134 ILD--DDPEAFAQYDWSLQELMAKASKNFTFPMILNDFGPLFKSLAHTYFSLAKGRAASK 191
Query 197 SDYRKLADAICSGDPTGAKKAA----QDLLELAN 226
Y LA A+ G P K+AA QD + + N
Sbjct 192 KYYSSLARALELG-PEAVKQAARAAMQDSIAIWN 224
>gi|253699950|ref|YP_003021139.1| GntR family transcriptional regulator [Geobacter sp. M21]
gi|251774800|gb|ACT17381.1| regulatory protein GntR HTH [Geobacter sp. M21]
Length=240
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 117/250 (47%), Gaps = 33/250 (13%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M P+ + V ++ EQI + +L+GE PGE LP ER LAEL GVSRP+VREAL L++
Sbjct 1 MKFTPIKPKKVSTQIAEQIRSSILSGEFNPGEKLPPERELAELFGVSRPSVREALNILTS 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGE--LDISVVRSILEARLRNFPKVAEL 118
+GLVE QG T VR ++ L L+ +G+ LD+ VR +E+ A
Sbjct 61 SGLVETYQGGGTLVRSLVENSAGMPLSELIRIDGDRALDVIEVRKGMES------WTAWY 114
Query 119 AAERNEPELAELLQ-------DSLRALDTEED-----PIVWQRHTLD-FWDHVVDSAGSI 165
AA R PE LQ +L L ED ++ R T + W H++ S
Sbjct 115 AASRALPEDVRRLQVVVDGMAKNLEQLKASEDFDAHFHMLVARATHNVVWSHMMQSIFEA 174
Query 166 VDRLMYNAFRAAYEPTLAALTTTMTAAAKR--PSDYRKLADAICSGDPTGAKKAAQDLLE 223
+ + +RA Y +T +R S + K+ + I D GA+ A + L+
Sbjct 175 MQEFQRDVWRAVY----------LTEEDQRLLFSHHLKIYEMIRDRDADGARGAMLEHLD 224
Query 224 LANTSLMAVL 233
A A +
Sbjct 225 FAQKRCSAYV 234
>gi|197119276|ref|YP_002139703.1| GntR family transcriptional regulator [Geobacter bemidjiensis
Bem]
gi|197088636|gb|ACH39907.1| transcriptional regulator, GntR family [Geobacter bemidjiensis
Bem]
Length=240
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/250 (33%), Positives = 116/250 (47%), Gaps = 33/250 (13%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M P+ + V ++ EQI + +L GE PGE LP ER LAEL GVSRP+VREAL L++
Sbjct 1 MKFTPIKPKKVSTQIAEQIRSSILAGEFNPGEKLPPERELAELFGVSRPSVREALNILTS 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGE--LDISVVRSILEARLRNFPKVAEL 118
+GLVE QG T VR ++ L L+ +G+ LD+ VR +E+ A
Sbjct 61 SGLVETYQGGGTLVRSLVENSAGMPLSELIRIDGDRALDVIEVRKGMES------WTAWY 114
Query 119 AAERNEPELAELLQ-------DSLRALDTEED-----PIVWQRHTLD-FWDHVVDSAGSI 165
AA R PE LQ +L L ED ++ R T + W H++ S
Sbjct 115 AATRALPEDVRRLQVVVDGMAKNLEQLKASEDFDAHFHMLVARATHNVVWGHMMQSIFEA 174
Query 166 VDRLMYNAFRAAYEPTLAALTTTMTAAAKR--PSDYRKLADAICSGDPTGAKKAAQDLLE 223
+ + +RA Y MT +R S + K+ + I D GA+ A + L+
Sbjct 175 MQEFQRDVWRAVY----------MTEEDQRLLFSHHLKIYEMIRDRDADGARVAMLEHLD 224
Query 224 LANTSLMAVL 233
A A +
Sbjct 225 FAQKRCSAYV 234
>gi|326201507|ref|ZP_08191378.1| GntR domain protein [Clostridium papyrosolvens DSM 2782]
gi|325988107|gb|EGD48932.1| GntR domain protein [Clostridium papyrosolvens DSM 2782]
Length=229
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/232 (32%), Positives = 118/232 (51%), Gaps = 13/232 (5%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M ++ VTR+SV E+VFEQ+ +L E GE +PSE L+ LLGVSR VR AL++L +
Sbjct 1 MPIKKVTRQSVSEQVFEQLKEQILNNEWQKGEKIPSENELSALLGVSRVTVRNALQKLIS 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLD-LLPRLLFRNGELDISVVRSILEARLRNFPKVAELA 119
GL+E R G+ + + D ++ L+P + L + ILE R VAELA
Sbjct 61 LGLIETRFGEGSFITDALPGISMNSLIPIAYLKENSL-----QEILEYRRVMEGNVAELA 115
Query 120 AERNEPELAELLQDSLRALDTEEDPI-VWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAY 178
++ PE L+++ A+D +D + + + L+F H++ A + + L+ F
Sbjct 116 TKKASPEDVAKLEEAYLAMDKVKDDLEQFSKADLNF--HLL-LANTTKNSLIIQTFYIFS 172
Query 179 EPTLAALTTTMTAAAKRPSDY--RKLADAICSGDPTGAKKAAQDLLE-LANT 227
+ A + +T Y + L +A+ G+ AK+ + +E L NT
Sbjct 173 DVLNRAFSQIVTKRGNSAGIYYHKLLLEAVKDGNSLEAKRIMDEHMEDLYNT 224
>gi|39996726|ref|NP_952677.1| GntR family transcriptional regulator [Geobacter sulfurreducens
PCA]
gi|39983607|gb|AAR35000.1| transcriptional regulator, GntR family [Geobacter sulfurreducens
PCA]
gi|298505737|gb|ADI84460.1| transcriptional regulator, GntR family [Geobacter sulfurreducens
KN400]
Length=241
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/193 (35%), Positives = 95/193 (50%), Gaps = 21/193 (10%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M +P+ + + ++ EQI + +L GE PGE LP ER LAE+ GVSRP+VREAL L+A
Sbjct 1 MNFKPIKPKKISTQIAEQIRSSILAGEFTPGEKLPPERELAEMFGVSRPSVREALNILAA 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGE--LDISVVRSILEARLRNFPKVAEL 118
AGLVE QG T V+ A L ++ E LD+ VR +EA A
Sbjct 61 AGLVESYQGGGTIVKSLMDAASGPPLSEIIKVEQERALDVIEVRKCMEAW------TAYY 114
Query 119 AAERNEPE-------LAELLQDSLRALDTEED-----PIVWQRHTLD-FWDHVVDSAGSI 165
AA+R P+ + ++ +L L ED IV R T + W H++ +
Sbjct 115 AAQRALPDDVRKLEGIVWNMEANLNGLKPSEDLDANFHIVIARSTHNVVWLHLMQTIFEA 174
Query 166 VDRLMYNAFRAAY 178
+ + +RA Y
Sbjct 175 MKEFQRSVWRAVY 187
>gi|29899145|gb|AAP03112.1| putative transcriptional regulator [Streptomyces griseochromogenes]
Length=239
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/221 (31%), Positives = 105/221 (48%), Gaps = 4/221 (1%)
Query 2 ALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAA 61
++ + R ++ + + ++ D+LTG P G LP ER LA+ GV+R ++ A RL A
Sbjct 11 GVEALPRETIVDVLESRLREDILTGRHPAGSYLPPERTLADGYGVTRTTLKHAFGRLMQA 70
Query 62 GLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAAE 121
GL+E R G T VRD+ R G DLLP L+ + + + + E R +AE AA
Sbjct 71 GLLETRHGVGTRVRDYLRLGGADLLPMLVRHSPDW----IGEVFEVRHSIGALIAERAAA 126
Query 122 RNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPT 181
R L+ L A+ D Q ++ + + G+ V L+ N AY P
Sbjct 127 RGTARQRAELRTLLAAVADAGDTDAVQLADIEVHRALARATGNRVYVLLTNTLFNAYLPV 186
Query 182 LAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLL 222
AAL T A + +A+ +GD GA++AA+ L
Sbjct 187 RAALQGPFTDAHVAHGRLAPVVEAVAAGDAPGARRAAEQYL 227
>gi|262199917|ref|YP_003271126.1| regulatory protein GntR HTH [Haliangium ochraceum DSM 14365]
gi|262083264|gb|ACY19233.1| regulatory protein GntR HTH [Haliangium ochraceum DSM 14365]
Length=261
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/252 (32%), Positives = 119/252 (48%), Gaps = 38/252 (15%)
Query 3 LQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAG 62
L+PV ++ V EE+ EQ+ +LTG PG LP ER L++ LGV+R ++REALK+L G
Sbjct 2 LRPVEKQRVAEEIVEQLRELILTGRYEPGAKLPPERELSKRLGVNRASLREALKKLEHLG 61
Query 63 LVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKV------- 115
LV +RQGD T V++F G++L+ LL ++R LE R R F +
Sbjct 62 LVRIRQGDGTRVQNFMETGGIELVSYLLPLAPTSHPDLIRDTLEFR-RIFGREVARLAAQ 120
Query 116 ---------AELAAERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIV 166
+AAER E +++ + L +D E F+ + G+ V
Sbjct 121 RARAEDIARVRVAAERAEGDVS---KSELFDIDFE------------FYVALTACTGNQV 165
Query 167 DRLMYNAFRAA---YEPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLE 223
L+ N R A Y P L LTT A + +R L AI + D A A + L
Sbjct 166 MGLLINTVRDAVRSYTPVLTQLTTPAEAVR---AHHRALLAAIEAHDVERAAHIADEYLG 222
Query 224 LANTSLMAVLVS 235
+++++ S
Sbjct 223 RGAERVLSLMAS 234
>gi|322420290|ref|YP_004199513.1| regulatory protein GntR HTH [Geobacter sp. M18]
gi|320126677|gb|ADW14237.1| regulatory protein GntR HTH [Geobacter sp. M18]
Length=240
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/253 (30%), Positives = 117/253 (47%), Gaps = 29/253 (11%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M P+ + V ++ EQI + +L GE PGE LP ER LA++ GVSRP+VREAL L++
Sbjct 1 MKFTPIKPKKVSTQIAEQIRSSILAGEFNPGEKLPPERELADMFGVSRPSVREALNILTS 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
+GLVE QG T VR +A L L+ +G+ + V+ E R+ A AA
Sbjct 61 SGLVETYQGGGTLVRSLVENAAGMPLTELIRIDGDRALDVI----EVRMGMESWTAWYAA 116
Query 121 ERNEPE-------LAELLQDSLRALDTEED-----PIVWQRHTLD-FWDHVVDSAGSIVD 167
R PE + + + +L L ED ++ R T + W H++ S +
Sbjct 117 TRALPEDIRRLEAVVDGMAKNLEELKHSEDLDAHFHMLVARATHNVVWSHMMQSIFEAMQ 176
Query 168 RLMYNAFRAAYEPTLAALTTTMTAAAKR--PSDYRKLADAICSGDPTGAKKAAQDLLELA 225
+ +RA Y +T +R + + K+ + I + GA+ A + L+ A
Sbjct 177 EFQRDVWRAVY----------LTEEDQRLLYNHHLKVYEMIRDRNADGARDAMLEHLDFA 226
Query 226 NTSLMAVLVSQAS 238
A + + S
Sbjct 227 QKRCSAYVTMRGS 239
>gi|229827258|ref|ZP_04453327.1| hypothetical protein GCWU000182_02644 [Abiotrophia defectiva
ATCC 49176]
gi|229788876|gb|EEP24990.1| hypothetical protein GCWU000182_02644 [Abiotrophia defectiva
ATCC 49176]
Length=239
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (29%), Positives = 112/224 (50%), Gaps = 11/224 (4%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M L + + SV +VFEQ+ +L PG LPSE L+ +LGVSR ++R AL+RL+
Sbjct 1 MGLHTIKKESVANQVFEQLKGQILNQSWLPGNKLPSETELSSILGVSRVSIRNALQRLNT 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEAR----LRNFPKVA 116
GL+E R GD + V++ + G D + L N L V+ +L+ R + A
Sbjct 61 LGLIETRLGDGSYVKE--ANIG-DQIKAALIPNIYLQAHSVKEVLQFRSVIEVETAALAA 117
Query 117 ELAAERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRA 176
A+ +N ++ + Q + L+ ++ + + ++ LDF + +S + + MY R
Sbjct 118 RNASAQNIQKMKSIFQ---KQLNHDKQDVAFAKYDLDFHFAIAESTENSLIIAMYEILRD 174
Query 177 AYEPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQD 220
T+ +++ P +R+L +AI +GD A +A ++
Sbjct 175 ILTKTMLRTVSSIGTEIALPY-HRRLIEAIEAGDELLAAQAMKE 217
>gi|183980844|ref|YP_001849135.1| GntR family transcriptional regulator [Mycobacterium marinum
M]
gi|183174170|gb|ACC39280.1| transcriptional regulatory protein (probably GntR-family) [Mycobacterium
marinum M]
Length=245
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/220 (33%), Positives = 105/220 (48%), Gaps = 3/220 (1%)
Query 3 LQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAG 62
LQP R+ V E++ IA +L G PPG ALP ER LAE LGV+R ++R+ L RL G
Sbjct 7 LQPPDRQRVDEQIATSIADAILDGVFPPGSALPPERELAEQLGVNRTSLRQGLARLQQMG 66
Query 63 LVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAAER 122
L+E RQG VRD + ++ L+ + G + +LE R P + LAAER
Sbjct 67 LIETRQGSGNVVRDPQSLTHPAVVEALVRKLGP---DFLVEVLEIRAALGPLIGRLAAER 123
Query 123 NEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPTL 182
N E AE L+ +L + + Q L ++ ++ + L+Y A+
Sbjct 124 NSSEDAEALRAALAEVADADTAPARQAADLAYFRVLIHGTRNRALGLLYRWVEQAFGGRE 183
Query 183 AALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLL 222
LT A +D + DA+ +GDP A A + L
Sbjct 184 HELTGAYEDADPVIADLTAINDAVLAGDPETAAAAVEGYL 223
>gi|240171897|ref|ZP_04750556.1| putative transcriptional regulatory protein [Mycobacterium kansasii
ATCC 12478]
Length=244
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/224 (32%), Positives = 103/224 (46%), Gaps = 9/224 (4%)
Query 2 ALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAA 61
A QP R V E++ IA +L G PPG LP ER LA GV+R ++R+ L RL
Sbjct 10 AFQPPDRLRVDEQIAASIADAILDGVFPPGSTLPPERDLAAQFGVNRTSLRQGLARLQQM 69
Query 62 GLVEVRQGDVTTVRD---FRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAEL 118
GL+EVR G + VRD A ++ L R +L + +LE R P + L
Sbjct 70 GLIEVRHGSGSVVRDPEGLTHPAVVEALVR------KLGPDFLAELLEIRAALGPLIGRL 123
Query 119 AAERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAY 178
AA+R+ P+ A L+D+L AL + Q L ++ ++ S + L+Y A+
Sbjct 124 AAQRHTPDDAHALRDALAALRDADGAAARQAADLAYFRVLIHSTRNRALGLLYRWVEHAF 183
Query 179 EPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLL 222
LT A +D R + A+ DP A A + L
Sbjct 184 GGREHELTGAYNDAEPVLADLRAITKAVLECDPVAAGAAVEAYL 227
>gi|147678567|ref|YP_001212782.1| transcriptional regulator [Pelotomaculum thermopropionicum SI]
gi|146274664|dbj|BAF60413.1| transcriptional regulator [Pelotomaculum thermopropionicum SI]
Length=234
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/142 (39%), Positives = 80/142 (57%), Gaps = 4/142 (2%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M LQP+ + + E + EQI +++G + PG+ LPSE+ LAE+L VSR +VREAL L
Sbjct 1 MELQPIKTKRIYETIVEQIKNLIVSGNLKPGDKLPSEKELAEILQVSRTSVREALCALDM 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAA 120
G++EVR G VR F H L+ L L L +R I+E R + A LAA
Sbjct 61 VGILEVRPGGGAFVRQFNPHDILESLSFALI----LQKEKIRDIMEVRRGLEIEAAGLAA 116
Query 121 ERNEPELAELLQDSLRALDTEE 142
ER E ++++LR ++ ++
Sbjct 117 ERATEENLAKMEEALRQMEADQ 138
>gi|118619656|ref|YP_907988.1| GntR family transcriptional regulator [Mycobacterium ulcerans
Agy99]
gi|118571766|gb|ABL06517.1| transcriptional regulatory protein (probably GntR-family) [Mycobacterium
ulcerans Agy99]
Length=245
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/220 (33%), Positives = 105/220 (48%), Gaps = 3/220 (1%)
Query 3 LQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAG 62
LQP R+ V E++ IA +L G PPG ALP ER LAE LGV+R ++R+ L RL G
Sbjct 7 LQPPDRQRVDEQIATSIADAILDGVFPPGSALPPERELAEQLGVNRTSLRQGLARLQQMG 66
Query 63 LVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAAER 122
L+E RQG VRD + ++ L+ + G + +LE R P + LAAER
Sbjct 67 LIETRQGSGNVVRDPQSLTHPAVVEALVRKLGP---DFLVEVLEIRAALGPLIGRLAAER 123
Query 123 NEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPTL 182
N E AE L+ +L + + Q L ++ ++ + L+Y A+
Sbjct 124 NSSEDAEALRAALAEVADADTAPARQAADLAYFRVLIHGTRNRALGLLYRWVEQAFGGRE 183
Query 183 AALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLL 222
LT A +D + DA+ +GDP A A + L
Sbjct 184 HDLTGAYEDADPVIADLTAINDAVLAGDPETAAAAVEGYL 223
>gi|284042660|ref|YP_003393000.1| GntR family transcriptional regulator [Conexibacter woesei DSM
14684]
gi|283946881|gb|ADB49625.1| regulatory protein GntR HTH [Conexibacter woesei DSM 14684]
Length=228
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/221 (36%), Positives = 115/221 (53%), Gaps = 5/221 (2%)
Query 6 VTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLVE 65
++R SVP++VF Q+ +L+G PGE +P++R LA LGV+ VREAL RL LVE
Sbjct 3 ISRTSVPDQVFAQLREAILSGSYAPGERIPTQRALAADLGVNMATVREALGRLEQLRLVE 62
Query 66 VRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELAAERNEP 125
R G T VRD+RR GLD L L G + S+ EAR + A LAA+R +
Sbjct 63 TRHGSGTHVRDWRRSGGLDALT--LLGAGTAGAEIGASLFEARRLLLAEAARLAAQRRDE 120
Query 126 ELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPTLAAL 185
A L + A+ D F + +V++AG++V +L+ N+ R Y P A
Sbjct 121 AHAAALGELAAAVAAAPDDATALLADWAFMEALVEAAGNVVFQLIMNSVRELYLPHADAF 180
Query 186 TTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLELAN 226
++A + Y +A A+ GD ++AA + ELA+
Sbjct 181 AALVSARDELLPHYDAVAAAVREGD---GERAATAVAELAH 218
>gi|15839886|ref|NP_334923.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|31791675|ref|NP_854168.1| GntR family transcriptional regulator [Mycobacterium bovis AF2122/97]
gi|57116742|ref|NP_215008.2| GntR family transcriptional regulator [Mycobacterium tuberculosis
H37Rv]
49 more sequence titles
gi|121636411|ref|YP_976634.1| GntR family transcriptional regulator [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|148660262|ref|YP_001281785.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|148821694|ref|YP_001286448.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
F11]
gi|167970682|ref|ZP_02552959.1| hypothetical transcriptional regulatory protein, gntR-family
[Mycobacterium tuberculosis H37Ra]
gi|224988883|ref|YP_002643570.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253797424|ref|YP_003030425.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 1435]
gi|254363457|ref|ZP_04979503.1| hypothetical transcriptional regulatory protein (probably gntR-family)
[Mycobacterium tuberculosis str. Haarlem]
gi|254549444|ref|ZP_05139891.1| transcriptional regulator, gntR-family protein [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289441878|ref|ZP_06431622.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T46]
gi|289446039|ref|ZP_06435783.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
CPHL_A]
gi|289552746|ref|ZP_06441956.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 605]
gi|289573082|ref|ZP_06453309.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
K85]
gi|289744202|ref|ZP_06503580.1| transcriptional regulatory protein, gntR-family [Mycobacterium
tuberculosis 02_1987]
gi|289748987|ref|ZP_06508365.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T92]
gi|289752527|ref|ZP_06511905.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
gi|289760614|ref|ZP_06519992.1| transcriptional regulator [Mycobacterium tuberculosis GM 1503]
gi|294996002|ref|ZP_06801693.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
210]
gi|297632981|ref|ZP_06950761.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
KZN 4207]
gi|297729956|ref|ZP_06959074.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
KZN R506]
gi|298523973|ref|ZP_07011382.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|313657285|ref|ZP_07814165.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
KZN V2475]
gi|339630565|ref|YP_004722207.1| GntR family transcriptional regulator [Mycobacterium africanum
GM041182]
gi|340625521|ref|YP_004743973.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|54039959|sp|P67740.1|Y505_MYCBO RecName: Full=Uncharacterized HTH-type transcriptional regulator
Mb0505
gi|54042800|sp|P67739.1|Y494_MYCTU RecName: Full=Uncharacterized HTH-type transcriptional regulator
Rv0494/MT0514
gi|13880022|gb|AAK44737.1| transcriptional regulator, GntR family [Mycobacterium tuberculosis
CDC1551]
gi|31617261|emb|CAD93368.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY GNTR-FAMILY)
[Mycobacterium bovis AF2122/97]
gi|38490193|emb|CAB00955.2| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY GNTR-FAMILY)
[Mycobacterium tuberculosis H37Rv]
gi|121492058|emb|CAL70521.1| Probable transcriptional regulatory protein (probably gntR-family)
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|134148971|gb|EBA41016.1| hypothetical transcriptional regulatory protein (probably gntR-family)
[Mycobacterium tuberculosis str. Haarlem]
gi|148504414|gb|ABQ72223.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|148720221|gb|ABR04846.1| hypothetical transcriptional regulatory protein, gntR-family
[Mycobacterium tuberculosis F11]
gi|224771996|dbj|BAH24802.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253318927|gb|ACT23530.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 1435]
gi|289414797|gb|EFD12037.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T46]
gi|289418997|gb|EFD16198.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
CPHL_A]
gi|289437378|gb|EFD19871.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 605]
gi|289537513|gb|EFD42091.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
K85]
gi|289684730|gb|EFD52218.1| transcriptional regulatory protein, gntR-family [Mycobacterium
tuberculosis 02_1987]
gi|289689574|gb|EFD57003.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
T92]
gi|289693114|gb|EFD60543.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
gi|289708120|gb|EFD72136.1| transcriptional regulator [Mycobacterium tuberculosis GM 1503]
gi|298493767|gb|EFI29061.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|326902322|gb|EGE49255.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
W-148]
gi|328457210|gb|AEB02633.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
KZN 4207]
gi|339329921|emb|CCC25571.1| putative transcriptional regulatory protein (probably GNTR-family)
[Mycobacterium africanum GM041182]
gi|340003711|emb|CCC42835.1| putative transcriptional regulatory protein (probably GNTR-family)
[Mycobacterium canettii CIPT 140010059]
gi|341600427|emb|CCC63097.1| probable transcriptional regulatory protein (probably gntR-family)
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344218313|gb|AEM98943.1| GntR family transcriptional regulator [Mycobacterium tuberculosis
CTRI-2]
Length=242
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/212 (34%), Positives = 100/212 (48%), Gaps = 9/212 (4%)
Query 3 LQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAG 62
QP R+ V E + IA +L G PPG LP ER LAE LGV+R ++R+ L RL G
Sbjct 11 FQPPDRQRVDERIATTIADAILDGVFPPGSTLPPERDLAERLGVNRTSLRQGLARLQQMG 70
Query 63 LVEVRQGDVTTVRD---FRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELA 119
L+EVR G + VRD A ++ L R +L + +LE R P + LA
Sbjct 71 LIEVRHGSGSVVRDPEGLTHPAVVEALVR------KLGPDFLVELLEIRAALGPLIGRLA 124
Query 120 AERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYE 179
A R+ PE AE L +L + + Q L ++ ++ S + L+Y A+
Sbjct 125 AARSTPEDAEALCAALEVVQQADTAAARQAADLAYFRVLIHSTRNRALGLLYRWVEHAFG 184
Query 180 PTLAALTTTMTAAAKRPSDYRKLADAICSGDP 211
ALT A +D R + A+ +GDP
Sbjct 185 GREHALTGAYDDADPVLTDLRAINGAVLAGDP 216
>gi|254230842|ref|ZP_04924169.1| hypothetical protein TBCG_00487 [Mycobacterium tuberculosis C]
gi|308231564|ref|ZP_07412931.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu001]
gi|308369408|ref|ZP_07417681.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu002]
26 more sequence titles
gi|308370425|ref|ZP_07421453.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu003]
gi|308371684|ref|ZP_07425823.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu004]
gi|308372907|ref|ZP_07430354.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu005]
gi|308374018|ref|ZP_07434540.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu006]
gi|308375172|ref|ZP_07442974.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu007]
gi|308376414|ref|ZP_07438763.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu008]
gi|308377437|ref|ZP_07479165.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu009]
gi|308378650|ref|ZP_07483359.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu010]
gi|308379792|ref|ZP_07487592.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu011]
gi|308395580|ref|ZP_07492095.2| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu012]
gi|124599901|gb|EAY58911.1| hypothetical protein TBCG_00487 [Mycobacterium tuberculosis C]
gi|308216811|gb|EFO76210.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu001]
gi|308327673|gb|EFP16524.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu002]
gi|308332024|gb|EFP20875.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu003]
gi|308335811|gb|EFP24662.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu004]
gi|308339416|gb|EFP28267.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu005]
gi|308343292|gb|EFP32143.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu006]
gi|308347187|gb|EFP36038.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu007]
gi|308351129|gb|EFP39980.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu008]
gi|308355759|gb|EFP44610.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu009]
gi|308359818|gb|EFP48669.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu010]
gi|308363621|gb|EFP52472.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu011]
gi|308367275|gb|EFP56126.1| transcriptional regulator, gntR-family [Mycobacterium tuberculosis
SUMu012]
gi|323721170|gb|EGB30232.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A]
gi|339293543|gb|AEJ45654.1| hypothetical protein CCDC5079_0464 [Mycobacterium tuberculosis
CCDC5079]
gi|339297184|gb|AEJ49294.1| hypothetical protein CCDC5180_0457 [Mycobacterium tuberculosis
CCDC5180]
Length=238
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/212 (34%), Positives = 100/212 (48%), Gaps = 9/212 (4%)
Query 3 LQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAG 62
QP R+ V E + IA +L G PPG LP ER LAE LGV+R ++R+ L RL G
Sbjct 7 FQPPDRQRVDERIATTIADAILDGVFPPGSTLPPERDLAERLGVNRTSLRQGLARLQQMG 66
Query 63 LVEVRQGDVTTVRD---FRRHAGLDLLPRLLFRNGELDISVVRSILEARLRNFPKVAELA 119
L+EVR G + VRD A ++ L R +L + +LE R P + LA
Sbjct 67 LIEVRHGSGSVVRDPEGLTHPAVVEALVR------KLGPDFLVELLEIRAALGPLIGRLA 120
Query 120 AERNEPELAELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYE 179
A R+ PE AE L +L + + Q L ++ ++ S + L+Y A+
Sbjct 121 AARSTPEDAEALCAALEVVQQADTAAARQAADLAYFRVLIHSTRNRALGLLYRWVEHAFG 180
Query 180 PTLAALTTTMTAAAKRPSDYRKLADAICSGDP 211
ALT A +D R + A+ +GDP
Sbjct 181 GREHALTGAYDDADPVLTDLRAINGAVLAGDP 212
>gi|315505771|ref|YP_004084658.1| regulatory protein GntR [Micromonospora sp. L5]
gi|315412390|gb|ADU10507.1| regulatory protein GntR HTH [Micromonospora sp. L5]
Length=242
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/109 (46%), Positives = 63/109 (58%), Gaps = 1/109 (0%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M P R SV + VF ++ +++G PGE LP ER LA V+R AVREAL+RL
Sbjct 1 MTFDPAPRVSVSDHVFGRLRDAIVSGRYAPGETLPGERELAGAFAVNRHAVREALRRLQQ 60
Query 61 AGLVEVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDI-SVVRSILEAR 108
GLV V QG T V D+R HAGLDL L L + ++VR +LE R
Sbjct 61 LGLVRVSQGGATRVLDWRVHAGLDLALSLARSTDVLPVETLVRDMLEMR 109
>gi|284041748|ref|YP_003392088.1| GntR family transcriptional regulator [Conexibacter woesei DSM
14684]
gi|283945969|gb|ADB48713.1| regulatory protein GntR HTH [Conexibacter woesei DSM 14684]
Length=229
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/101 (50%), Positives = 68/101 (68%), Gaps = 1/101 (0%)
Query 9 RSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLVEVRQ 68
R V + V E++ +L G++ G A+PSER LA+ LGV+R AVREALKRL AGLV++ Q
Sbjct 9 RRVSDVVHERLRQQILGGDLAVGAAVPSERVLADELGVNRHAVREALKRLEQAGLVQISQ 68
Query 69 GDVTTVRDFRRHAGLDLLPRLLFRNGELDI-SVVRSILEAR 108
G T VRD+R GL++L L+ GEL +VR++LE R
Sbjct 69 GGPTRVRDWRESGGLEVLLDLVDHPGELPPEELVRAVLELR 109
>gi|323700681|ref|ZP_08112593.1| GntR domain protein [Desulfovibrio sp. ND132]
gi|323460613|gb|EGB16478.1| GntR domain protein [Desulfovibrio desulfuricans ND132]
Length=237
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/232 (32%), Positives = 116/232 (50%), Gaps = 21/232 (9%)
Query 1 MALQPVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSA 60
M +PV+R+S+ E+ QI + G + PG+ LP+ERRLAE GVSR VRE +K LS
Sbjct 1 MEARPVSRKSISGEIVSQIREMIDHGRLQPGDRLPAERRLAEQFGVSRTTVREGIKILSE 60
Query 61 AGLVEVRQGDVTTVR---DFRRHAGLDLLPRLLFRN-GELDISVVRSILEARLRNFPKVA 116
+GL+ RQG T V D R L+ +L N G D+ VR +LE P++A
Sbjct 61 SGLLTSRQGAGTFVSRPDDGNREGA--LIEAVLAGNYGLQDVFEVRKMLE------PEIA 112
Query 117 ELAAERNEPE----LAELLQDSLRAL-DTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMY 171
LAA P+ L ++ + +A+ D E + R F + +++G+ V R M
Sbjct 113 ALAARNGSPDAKTRLEAIIMEQEQAIADGESGAGIDHR----FHQALAEASGNPVLREMV 168
Query 172 NAFRAAYEPTLAALTTTMTAAAKRPSDYRKLADAICSGDPTGAKKAAQDLLE 223
A + + A + A + +R + +A+ +G A++A ++ L+
Sbjct 169 TALHEGFSRSRAEEVQSPRRAKASLAAHRAIVEAVRNGHAMQAERAMREHLD 220
>gi|148264251|ref|YP_001230957.1| GntR domain-containing protein [Geobacter uraniireducens Rf4]
gi|146397751|gb|ABQ26384.1| transcriptional regulator, GntR family [Geobacter uraniireducens
Rf4]
Length=239
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/180 (38%), Positives = 90/180 (50%), Gaps = 21/180 (11%)
Query 14 EVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLVEVRQGDVTT 73
++ EQI T +L+GE PG+ LP ER LAEL GVSRP+VREAL L+A+GLVE QG T
Sbjct 14 QIAEQIRTSILSGEFNPGDKLPPERELAELFGVSRPSVREALNVLAASGLVEAFQGGGTV 73
Query 74 VRDFRRHAGLDLLPRLLFRNGE--LDISVVRSILEARLRNFPKVAELAAERNEPE----L 127
V+ L L+ GE LD+ VR +E+ A AA+R PE L
Sbjct 74 VKSLVETPTGTPLSELIRGEGERALDVIEVRKGMES------WTAYYAAQRALPEDIVRL 127
Query 128 AELLQDSLRALD---TEED-----PIVWQRHTLD-FWDHVVDSAGSIVDRLMYNAFRAAY 178
++ R LD + ED V R T + W H++ S + N +RA Y
Sbjct 128 QAIVDAMARNLDGAKSSEDLDANFHTVIARATHNVVWLHMMQSIFDAMKEFQRNVWRAVY 187
>gi|340029683|ref|ZP_08665746.1| GntR domain-containing protein [Paracoccus sp. TRP]
Length=237
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/235 (30%), Positives = 115/235 (49%), Gaps = 23/235 (9%)
Query 5 PVTRRSVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLV 64
PV+R++ E VFE + +LTG +P G LPSE +LAE GVSRP +REA++ L GL
Sbjct 13 PVSRKNAAETVFEDLRGAILTGRLPVGIRLPSEAKLAEHYGVSRPIIREAMRSLQTLGLT 72
Query 65 EVRQGDVTTVRDFRRHAGLDLLPRLLFRNGELDISVVRSILEAR-LRNFPKVAELAAERN 123
R G + V R+ +P L + + R ++EAR P A R+
Sbjct 73 RSRSGSGSFVISDRQ------VPELAYGSYS-----ARELIEARPFIEIPAAGWAALRRS 121
Query 124 EPELAELLQ--DSLRALDTEEDPIVWQRHTLDFWDHVVDSAGSIVDRLMYNAFRAAYEPT 181
E ++ LLQ DS ++ +ED + W R DF + ++A +RL + +
Sbjct 122 EEDMKRLLQLCDS---MERQEDALKWVRLDSDFHCLIAEAAR---NRLFARIVTDSRDAL 175
Query 182 LAALTTTMTAAAKRPS---DYRKLADAICSGDPTGAKKAAQDLLELANTSLMAVL 233
+ A +R + ++R++A+AI +G + A+ A +D L ++ ++
Sbjct 176 MRQSELVNLMADRRITSNHEHRRIAEAIATGSESEAQTAMRDHLHEVEQAMTWII 230
Lambda K H
0.318 0.132 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 332206503090
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40