BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0587
Length=265
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [M... 513 1e-143
gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycob... 510 7e-143
gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycob... 472 3e-131
gi|342858889|ref|ZP_08715543.1| hypothetical protein MCOL_08433 ... 470 1e-130
gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Myc... 464 6e-129
gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [My... 418 4e-115
gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 ... 410 7e-113
gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [... 405 4e-111
gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [M... 405 4e-111
gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yr... 404 6e-111
gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1... 403 1e-110
gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a... 403 1e-110
gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A... 402 2e-110
gi|342859379|ref|ZP_08716033.1| hypothetical protein MCOL_10883 ... 400 1e-109
gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycob... 400 1e-109
gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A... 399 2e-109
gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Myc... 399 2e-109
gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [M... 399 2e-109
gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574... 398 4e-109
gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [My... 394 9e-108
gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a... 388 6e-106
gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycoba... 387 6e-106
gi|333988760|ref|YP_004521374.1| hypothetical protein JDM601_012... 375 2e-102
gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A... 358 7e-97
gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcu... 351 5e-95
gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobac... 326 3e-87
gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobac... 323 1e-86
gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycob... 322 3e-86
gi|342862240|ref|ZP_08718882.1| hypothetical protein MCOL_25241 ... 322 3e-86
gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c ... 320 2e-85
gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacte... 319 2e-85
gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [M... 318 4e-85
gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycob... 313 2e-83
gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avi... 312 3e-83
gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [My... 312 3e-83
gi|315443550|ref|YP_004076429.1| ABC transporter involved in res... 312 3e-83
gi|333992272|ref|YP_004524886.1| hypothetical protein JDM601_363... 312 3e-83
gi|336461223|gb|EGO40099.1| ABC-type transport system involved i... 312 3e-83
gi|145223093|ref|YP_001133771.1| hypothetical protein Mflv_2506 ... 312 3e-83
gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium... 312 3e-83
gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 ... 311 4e-83
gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 ... 311 4e-83
gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_1389... 311 9e-83
gi|342860430|ref|ZP_08717081.1| hypothetical protein MCOL_16186 ... 311 9e-83
gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [M... 310 1e-82
gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycoba... 310 1e-82
gi|315442585|ref|YP_004075464.1| ABC transporter involved in res... 310 1e-82
gi|145222146|ref|YP_001132824.1| hypothetical protein Mflv_1554 ... 310 1e-82
gi|254822745|ref|ZP_05227746.1| hypothetical protein MintA_22639... 310 1e-82
gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycoba... 310 1e-82
>gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
H37Rv]
gi|15839989|ref|NP_335026.1| hypothetical protein MT0616 [Mycobacterium tuberculosis CDC1551]
gi|31791769|ref|NP_854262.1| integral membrane protein YrbE2a [Mycobacterium bovis AF2122/97]
78 more sequence titles
Length=265
Score = 513 bits (1320), Expect = 1e-143, Method: Compositional matrix adjust.
Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP
Sbjct 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA
Sbjct 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL
Sbjct 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
Query 241 VLCVIALFATNVVLTTIGVRFGTGH 265
VLCVIALFATNVVLTTIGVRFGTGH
Sbjct 241 VLCVIALFATNVVLTTIGVRFGTGH 265
>gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
gi|289693213|gb|EFD60642.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
Length=265
Score = 510 bits (1314), Expect = 7e-143, Method: Compositional matrix adjust.
Identities = 264/265 (99%), Positives = 264/265 (99%), Gaps = 0/265 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
MTTHAVII YLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP
Sbjct 1 MTTHAVIIAYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA
Sbjct 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL
Sbjct 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
Query 241 VLCVIALFATNVVLTTIGVRFGTGH 265
VLCVIALFATNVVLTTIGVRFGTGH
Sbjct 241 VLCVIALFATNVVLTTIGVRFGTGH 265
>gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254776985|ref|ZP_05218501.1| hypothetical protein MaviaA2_20271 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41399014|gb|AAS06632.1| hypothetical protein MAP_4082 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460598|gb|EGO39491.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=265
Score = 472 bits (1214), Expect = 3e-131, Method: Compositional matrix adjust.
Identities = 240/265 (91%), Positives = 251/265 (95%), Gaps = 0/265 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
M++ AVI YLR Q QP +DA+GGF+RTCVLTGKAL RRPF WRE IEQGWFITSVSLLP
Sbjct 1 MSSQAVIANYLRGQIQPGIDAVGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLP 60
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
TLAV+IPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAG+TAICA
Sbjct 61 TLAVAIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRVVAATIVA LLNGAVITIGLVGGFVF VFIQ
Sbjct 121 DLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQ 180
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
H+SAGAYVGTLTL+TGLPEV+ISVVKSATFG IAGLVGCYRGLTTKGGPKGVGTAVNETL
Sbjct 181 HISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
Query 241 VLCVIALFATNVVLTTIGVRFGTGH 265
VLCVIALFA NVVLTTIGVRFGTG
Sbjct 241 VLCVIALFAVNVVLTTIGVRFGTGR 265
>gi|342858889|ref|ZP_08715543.1| hypothetical protein MCOL_08433 [Mycobacterium colombiense CECT
3035]
gi|342133130|gb|EGT86333.1| hypothetical protein MCOL_08433 [Mycobacterium colombiense CECT
3035]
Length=265
Score = 470 bits (1209), Expect = 1e-130, Method: Compositional matrix adjust.
Identities = 239/265 (91%), Positives = 250/265 (95%), Gaps = 0/265 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
M+TH V+ TYLR Q QP +DA+GGF+RTC LTGKAL RRPF WRE IEQGWFITSVSLLP
Sbjct 1 MSTHTVLATYLRGQVQPGIDAVGGFFRTCALTGKALFRRPFQWRETIEQGWFITSVSLLP 60
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
TLAV+IPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAG+TAICA
Sbjct 61 TLAVAIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRVVAATIVA LLNGAVITIGLVGGFVF VFIQ
Sbjct 121 DLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQ 180
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
H+SAGAYVGTLTL+TGLPEV+ISVVKSA FG IAGLVGCYRGLTTKGGPKGVGTAVNETL
Sbjct 181 HISAGAYVGTLTLITGLPEVVISVVKSAIFGTIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
Query 241 VLCVIALFATNVVLTTIGVRFGTGH 265
VLCVIALFA NVVLTTIGVRFGTG
Sbjct 241 VLCVIALFAVNVVLTTIGVRFGTGR 265
>gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Mycobacterium avium 104]
gi|118167879|gb|ABK68776.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=260
Score = 464 bits (1194), Expect = 6e-129, Method: Compositional matrix adjust.
Identities = 237/260 (92%), Positives = 247/260 (95%), Gaps = 0/260 (0%)
Query 6 VIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVS 65
+I YLR Q QP +DA+GGF+RTCVLTGKAL RRPF WRE IEQGWFITSVSLLPTLAV+
Sbjct 1 MIANYLRGQIQPGIDAVGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLPTLAVA 60
Query 66 IPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGAR 125
IPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAG+TAICADLGAR
Sbjct 61 IPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGAR 120
Query 126 TIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAG 185
TIREEIDA+EVLGIDPIHRLVVPRVVAATIVA LLNGAVITIGLVGGFVF VFIQH+SAG
Sbjct 121 TIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAG 180
Query 186 AYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVI 245
AYVGTLTL+TGLPEV+ISVVKSATFG IAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVI
Sbjct 181 AYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVI 240
Query 246 ALFATNVVLTTIGVRFGTGH 265
ALFA NVVLTTIGVRFGTG
Sbjct 241 ALFAVNVVLTTIGVRFGTGR 260
>gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [Mycobacterium vanbaalenii PYR-1]
gi|119953978|gb|ABM10983.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=265
Score = 418 bits (1074), Expect = 4e-115, Method: Compositional matrix adjust.
Identities = 209/265 (79%), Positives = 237/265 (90%), Gaps = 0/265 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
MT+ + + Y+R+Q +P ++A+GGF R CVL GKA +R PF WRE I Q WF+ V+ LP
Sbjct 1 MTSSSNLTGYVREQVKPGLEAVGGFVRMCVLVGKATLRPPFQWREFILQSWFLMRVAFLP 60
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
TLAVSIPLTVL+IFTLNILLAEFGAAD+SGAGAA+GAVTQLGPL TVLV+AGAG+TAICA
Sbjct 61 TLAVSIPLTVLLIFTLNILLAEFGAADVSGAGAAIGAVTQLGPLVTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRVVA+T VA LLNGAVIT+GLVGGF+F V++Q
Sbjct 121 DLGARTIREEIDALEVLGIDPIHRLVVPRVVASTFVAILLNGAVITVGLVGGFIFGVYLQ 180
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
+VSAGAYV TLTL+TGLPEV+IS+VK+ATFGLIAGLVGCYRGLT GG KGVGTAVNETL
Sbjct 181 NVSAGAYVSTLTLITGLPEVVISIVKAATFGLIAGLVGCYRGLTVAGGAKGVGTAVNETL 240
Query 241 VLCVIALFATNVVLTTIGVRFGTGH 265
VLCVIALFA NVVLTTIGVRFGTG
Sbjct 241 VLCVIALFAVNVVLTTIGVRFGTGS 265
>gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 [Mycobacterium gilvum PYR-GCK]
gi|315441804|ref|YP_004074683.1| ABC transporter involved in resistance to organic solvents, permease
[Mycobacterium sp. Spyr1]
gi|145213794|gb|ABP43198.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
gi|315260107|gb|ADT96848.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium sp. Spyr1]
Length=265
Score = 410 bits (1055), Expect = 7e-113, Method: Compositional matrix adjust.
Identities = 210/264 (80%), Positives = 233/264 (89%), Gaps = 0/264 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
MTT + + Y+R+Q +P + A+GGF R CVL GKA R PF WRE I Q WF+ V+ LP
Sbjct 1 MTTTSGLSGYVREQVKPGLLAVGGFVRMCVLVGKATFRTPFQWREFILQSWFLLRVAFLP 60
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
T+AVSIPLTVL+IFTLNILL EFGAADISGAGAALGAVTQLGPL TVLV+AGAG+TAICA
Sbjct 61 TVAVSIPLTVLLIFTLNILLTEFGAADISGAGAALGAVTQLGPLVTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRV+A+T VA LLNGAVITIGLVGGF+F V++Q
Sbjct 121 DLGARTIREEIDALEVLGIDPIHRLVVPRVIASTFVAMLLNGAVITIGLVGGFIFGVYLQ 180
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
+VSAGAYV TLTLVTGLPEV+IS+VK+ TFGLIAGLVGCYRGLT GG KGVGTAVNETL
Sbjct 181 NVSAGAYVSTLTLVTGLPEVLISLVKALTFGLIAGLVGCYRGLTVAGGAKGVGTAVNETL 240
Query 241 VLCVIALFATNVVLTTIGVRFGTG 264
VLCVIALFA NVVLTTIGVRFGTG
Sbjct 241 VLCVIALFAVNVVLTTIGVRFGTG 264
>gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99]
gi|118568903|gb|ABL03654.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium
ulcerans Agy99]
Length=267
Score = 405 bits (1040), Expect = 4e-111, Method: Compositional matrix adjust.
Identities = 196/256 (77%), Positives = 231/256 (91%), Gaps = 0/256 (0%)
Query 10 YLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLT 69
YLRDQ + ++ +GGF+R CVLTGKAL RRPF WRE I Q WF+ V+LLPT+ VSIPLT
Sbjct 12 YLRDQLETSLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVALLPTIMVSIPLT 71
Query 70 VLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIRE 129
VL+IFTLN+LLA+FGAADISGAGAA+GAVTQLGPLTTVLV+AGAG+TAICADLGARTIRE
Sbjct 72 VLLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIRE 131
Query 130 EIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVG 189
EIDAMEVLGIDPIHRLVVPRV+AAT VA LLN VIT+GLVGG++F V++Q+++ GAY+
Sbjct 132 EIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVYLQNINGGAYLA 191
Query 190 TLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFA 249
TLT +TG+PEV I++VK+ATFGLIAGLVGCYRGLT +GG KG+GTAVNET+VLCV+AL+A
Sbjct 192 TLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYA 251
Query 250 TNVVLTTIGVRFGTGH 265
NV+LTTIGVRFGTGH
Sbjct 252 VNVILTTIGVRFGTGH 267
>gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [Mycobacterium tuberculosis
H37Rv]
gi|15839545|ref|NP_334582.1| hypothetical protein MT0176 [Mycobacterium tuberculosis CDC1551]
gi|31791345|ref|NP_853838.1| integral membrane protein YRBE1A [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=265
Score = 405 bits (1040), Expect = 4e-111, Method: Compositional matrix adjust.
Identities = 202/265 (77%), Positives = 232/265 (88%), Gaps = 0/265 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
MTT + Y+RDQ Q + +GGF+R CVLTGKAL R PF WRE I Q WFI V LP
Sbjct 1 MTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
T+ VSIPLTVL+IFTLNILLA+FGAADISG+GAA+GAVTQLGPLTTVLV+AGAG+TAICA
Sbjct 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRV+A+ +VA LLNG VIT+GLVGGF+F V++Q
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
+VS GAY+ TLTL+TGLPEV+I+ +K+ATFGLIAGLVGCYRGLT +GG KG+GTAVNET+
Sbjct 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
Query 241 VLCVIALFATNVVLTTIGVRFGTGH 265
VLCVIALFA NV+LTTIGVRFGTG
Sbjct 241 VLCVIALFAVNVILTTIGVRFGTGR 265
>gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T46]
gi|289568066|ref|ZP_06448293.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T17]
gi|289748643|ref|ZP_06508021.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T92]
gi|289756232|ref|ZP_06515610.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
gi|289414461|gb|EFD11701.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T46]
gi|289541819|gb|EFD45468.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T17]
gi|289689230|gb|EFD56659.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
T92]
gi|289696819|gb|EFD64248.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
Length=265
Score = 404 bits (1038), Expect = 6e-111, Method: Compositional matrix adjust.
Identities = 202/265 (77%), Positives = 232/265 (88%), Gaps = 0/265 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
MTT + Y+RDQ Q + +GGF+R CVLTGKAL R PF WRE I Q WFI V LP
Sbjct 1 MTTSITLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
T+ VSIPLTVL+IFTLNILLA+FGAADISG+GAA+GAVTQLGPLTTVLV+AGAG+TAICA
Sbjct 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRV+A+ +VA LLNG VIT+GLVGGF+F V++Q
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQ 180
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
+VS GAY+ TLTL+TGLPEV+I+ +K+ATFGLIAGLVGCYRGLT +GG KG+GTAVNET+
Sbjct 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
Query 241 VLCVIALFATNVVLTTIGVRFGTGH 265
VLCVIALFA NV+LTTIGVRFGTG
Sbjct 241 VLCVIALFAVNVILTTIGVRFGTGR 265
>gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1A [Mycobacterium marinum M]
gi|183173767|gb|ACC38877.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium
marinum M]
Length=267
Score = 403 bits (1036), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 196/256 (77%), Positives = 230/256 (90%), Gaps = 0/256 (0%)
Query 10 YLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLT 69
YLRDQ + + +GGF+R CVLTGKAL RRPF WRE I Q WF+ V+LLPT+ VSIPLT
Sbjct 12 YLRDQLETPLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVALLPTIMVSIPLT 71
Query 70 VLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIRE 129
VL+IFTLN+LLA+FGAADISGAGAA+GAVTQLGPLTTVLV+AGAG+TAICADLGARTIRE
Sbjct 72 VLLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIRE 131
Query 130 EIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVG 189
EIDAMEVLGIDPIHRLVVPRV+AAT VA LLN VIT+GLVGG++F V++Q+++ GAY+
Sbjct 132 EIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVYLQNINGGAYLA 191
Query 190 TLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFA 249
TLT +TG+PEV I++VK+ATFGLIAGLVGCYRGLT +GG KG+GTAVNET+VLCV+AL+A
Sbjct 192 TLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYA 251
Query 250 TNVVLTTIGVRFGTGH 265
NV+LTTIGVRFGTGH
Sbjct 252 VNVILTTIGVRFGTGH 267
>gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
K85]
gi|289537178|gb|EFD41756.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
K85]
Length=265
Score = 403 bits (1035), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 201/265 (76%), Positives = 231/265 (88%), Gaps = 0/265 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
MTT + Y+RDQ Q + +GGF+R CVLTGKAL R PF WRE I Q WFI V LP
Sbjct 1 MTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLP 60
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
T+ VSIPLTVL+IFTLNILLA+FGAADISG+GAA+GAVTQLGPLTTVLV+AGAG+TAICA
Sbjct 61 TIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICA 120
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDAMEVLGIDPIHRLVVPRV+A+ +VA LLN VIT+GLVGGF+F V++Q
Sbjct 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNSLVITVGLVGGFLFGVYLQ 180
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
+VS GAY+ TLTL+TGLPEV+I+ +K+ATFGLIAGLVGCYRGLT +GG KG+GTAVNET+
Sbjct 181 NVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETV 240
Query 241 VLCVIALFATNVVLTTIGVRFGTGH 265
VLCVIALFA NV+LTTIGVRFGTG
Sbjct 241 VLCVIALFAVNVILTTIGVRFGTGR 265
>gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897324|gb|EFG76928.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=271
Score = 402 bits (1034), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 198/259 (77%), Positives = 231/259 (90%), Gaps = 0/259 (0%)
Query 7 IITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSI 66
++ YLRDQ Q + IGGF+R CVLTG+AL R PF WRE + Q WFI V+ LPT+ VSI
Sbjct 13 LVGYLRDQLQTPLTVIGGFFRMCVLTGRALFRWPFQWREFVLQCWFIMRVAFLPTIMVSI 72
Query 67 PLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGART 126
PLTVL+IFTLN+LLA+FGAAD+SGAGAA+GAVTQLGPLTTVLV+AGAG+TAICADLGART
Sbjct 73 PLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGART 132
Query 127 IREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGA 186
IREEIDAMEVLGIDPIHRLVVPRV+AAT+VA LLNG VIT+GLVGG++F V++Q+VS GA
Sbjct 133 IREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGA 192
Query 187 YVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIA 246
Y+ TLT +TGLPEV+I+ VK+A FGLIAGLVGCYRGLT +GG KG+GTAVNET+VLCV+A
Sbjct 193 YLATLTTITGLPEVVIATVKAAIFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVA 252
Query 247 LFATNVVLTTIGVRFGTGH 265
L+A NVVLTTIGVRFGTGH
Sbjct 253 LYAVNVVLTTIGVRFGTGH 271
>gi|342859379|ref|ZP_08716033.1| hypothetical protein MCOL_10883 [Mycobacterium colombiense CECT
3035]
gi|342133620|gb|EGT86823.1| hypothetical protein MCOL_10883 [Mycobacterium colombiense CECT
3035]
Length=259
Score = 400 bits (1028), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 197/259 (77%), Positives = 232/259 (90%), Gaps = 0/259 (0%)
Query 7 IITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSI 66
++ Y+RDQ + + +GGF+R CVLTGKAL R PF +RE I+Q WFI V+ LPT+ VSI
Sbjct 1 MVGYVRDQLETPLTLVGGFFRMCVLTGKALFRWPFQYREFIQQCWFIMRVAFLPTIMVSI 60
Query 67 PLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGART 126
PLTVL+IFTLN+LLA+FGAAD+SGAGAA+GAVTQLGPLTTVLV+AGAG+TAICADLGART
Sbjct 61 PLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGART 120
Query 127 IREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGA 186
IREEIDAMEVLGIDPIHRLVVPRVVAAT+VA LLNG VIT+GLVGG++F V++Q+VS GA
Sbjct 121 IREEIDAMEVLGIDPIHRLVVPRVVAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGA 180
Query 187 YVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIA 246
Y+ TLT +TGLPEV+I+ VK+A FGLIAGLVGCYRGLT +GG KG+GTAVNET+VLCV+A
Sbjct 181 YLATLTTITGLPEVVIATVKAAVFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVA 240
Query 247 LFATNVVLTTIGVRFGTGH 265
L+A NVVLTTIGVRFGTGH
Sbjct 241 LYAVNVVLTTIGVRFGTGH 259
>gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398532|gb|AAS06152.1| hypothetical protein MAP_3602 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459862|gb|EGO38774.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=271
Score = 400 bits (1027), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 196/259 (76%), Positives = 231/259 (90%), Gaps = 0/259 (0%)
Query 7 IITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSI 66
++ YLRDQ + + +GGF+R CVLTGKAL R PF WRE + Q WFI V+ LPT+ VSI
Sbjct 13 LVGYLRDQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSI 72
Query 67 PLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGART 126
PLTVL+IFTLN+LLA+FGAAD+SGAGAA+GAVTQLGPLTTVLV+AGAG+TAICADLGART
Sbjct 73 PLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGART 132
Query 127 IREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGA 186
IREEIDAMEVLGIDPIHRLVVPRV+AAT+VA LLNG VIT+GLVGG++F V++Q+VS GA
Sbjct 133 IREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGA 192
Query 187 YVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIA 246
Y+ TLT +TGLPEV+I+ VK+A FGLIAGLVGC+RGLT +GG KG+GTAVNET+VLCV+A
Sbjct 193 YLATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVA 252
Query 247 LFATNVVLTTIGVRFGTGH 265
L+A NVVLTTIGVRFGTGH
Sbjct 253 LYAVNVVLTTIGVRFGTGH 271
>gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A [Mycobacterium kansasii ATCC
12478]
Length=268
Score = 399 bits (1026), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 195/264 (74%), Positives = 232/264 (88%), Gaps = 0/264 (0%)
Query 2 TTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPT 61
+T ++ YLRDQ + + +GGF+R CVLTGKAL RRPF WRE I Q WFI V+LLP
Sbjct 5 STRPHLMGYLRDQLETPLTLVGGFFRMCVLTGKALFRRPFQWREFILQCWFIMRVALLPA 64
Query 62 LAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICAD 121
+ VS+P TVL+IFTLN+LLA+FGAAD+SGAGAA+GAVTQLGP TVLV+AGAG+TAICAD
Sbjct 65 ILVSVPFTVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPQVTVLVVAGAGSTAICAD 124
Query 122 LGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQH 181
LGARTIREEIDAMEVLGIDPIHRLVVPRV+AAT++A LLN VIT+GLVGG++F V++Q+
Sbjct 125 LGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLIATLLNALVITVGLVGGYLFGVYLQN 184
Query 182 VSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLV 241
VS GAY+ TLT +TGLPEV+I++VK+ATFGLIAGLVGCYRGLT +GG KG+GTAVNET+V
Sbjct 185 VSGGAYLATLTTITGLPEVVIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVV 244
Query 242 LCVIALFATNVVLTTIGVRFGTGH 265
LCV+ALFA NVVLTT+GVRFGTGH
Sbjct 245 LCVVALFAVNVVLTTVGVRFGTGH 268
>gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Mycobacterium avium 104]
gi|254776559|ref|ZP_05218075.1| hypothetical protein MaviaA2_18089 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118166040|gb|ABK66937.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=258
Score = 399 bits (1025), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 196/256 (77%), Positives = 229/256 (90%), Gaps = 0/256 (0%)
Query 10 YLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLT 69
YLRDQ + + +GGF+R CVLTGKAL R PF WRE + Q WFI V+ LPT+ VSIPLT
Sbjct 3 YLRDQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLT 62
Query 70 VLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIRE 129
VL+IFTLN+LLA+FGAAD+SGAGAA+GAVTQLGPLTTVLV+AGAG+TAICADLGARTIRE
Sbjct 63 VLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIRE 122
Query 130 EIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVG 189
EIDAMEVLGIDPIHRLVVPRV+AAT+VA LLNG VIT+GLVGG++F V++Q+VS GAY+
Sbjct 123 EIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLA 182
Query 190 TLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFA 249
TLT +TGLPEV+I+ VK+A FGLIAGLVGC+RGLT +GG KG+GTAVNET+VLCV+AL+A
Sbjct 183 TLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYA 242
Query 250 TNVVLTTIGVRFGTGH 265
NVVLTTIGVRFGTGH
Sbjct 243 VNVVLTTIGVRFGTGH 258
>gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [Mycobacterium smegmatis str.
MC2 155]
gi|118170901|gb|ABK71797.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=266
Score = 399 bits (1025), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 200/258 (78%), Positives = 225/258 (88%), Gaps = 0/258 (0%)
Query 8 ITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIP 67
+ YLR Q + + +GGF++ V+TGKAL RPF W+E + Q WF+ V+ LPTLAVSIP
Sbjct 9 VDYLRGQLEKPLATVGGFFKMSVMTGKALFTRPFQWKEFVLQSWFLIRVAFLPTLAVSIP 68
Query 68 LTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTI 127
LTVLIIFTLNILLAEFGAAD+SGAGAALGAVTQLGPL TVLV+AGAG+TAICADLGART+
Sbjct 69 LTVLIIFTLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTV 128
Query 128 REEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAY 187
REEIDA+EVLGIDPI RLVVPRVVA+T VA +LNGAVITIGLVGGF F V+IQ+VSAGAY
Sbjct 129 REEIDALEVLGIDPIERLVVPRVVASTFVAFMLNGAVITIGLVGGFFFGVYIQNVSAGAY 188
Query 188 VGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIAL 247
V TLTL+TG PEV+ISVVK+ FG+IAGLVGCYRGLT GG KGVGTAVNETLVLCV+AL
Sbjct 189 VSTLTLLTGFPEVLISVVKATLFGMIAGLVGCYRGLTVAGGSKGVGTAVNETLVLCVVAL 248
Query 248 FATNVVLTTIGVRFGTGH 265
FA NVVLTTIGVRFGTG
Sbjct 249 FAVNVVLTTIGVRFGTGR 266
>gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574 [Mycobacterium intracellulare
ATCC 13950]
Length=255
Score = 398 bits (1023), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 195/255 (77%), Positives = 229/255 (90%), Gaps = 0/255 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
+RDQ Q ++ +GGF+R CVLTGKAL R PF WRE + Q WFI V+ LPT+ VSIPLTV
Sbjct 1 MRDQLQTPLELVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTV 60
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+IFTLN+LLA+FGAAD+SGAGAA+GAVTQLGPLTTVLV+AGAG+TAICADLGARTIREE
Sbjct 61 LLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAMEVLGIDPIHRLVVPRV+AAT+VA LLNG VIT+GLVGG++F V++Q+VS GAY+ T
Sbjct 121 IDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLAT 180
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAT 250
LT +TGLPEV+I+ VK+A FGLIAGLVGC+RGLT +GG KG+GTAVNET+VLCV+AL+A
Sbjct 181 LTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAV 240
Query 251 NVVLTTIGVRFGTGH 265
NVVLTTIGVRFGTGH
Sbjct 241 NVVLTTIGVRFGTGH 255
>gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [Mycobacterium sp. MCS]
gi|119866181|ref|YP_936133.1| hypothetical protein Mkms_0125 [Mycobacterium sp. KMS]
gi|126432719|ref|YP_001068410.1| hypothetical protein Mjls_0106 [Mycobacterium sp. JLS]
gi|108767515|gb|ABG06237.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119692270|gb|ABL89343.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
gi|126232519|gb|ABN95919.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=265
Score = 394 bits (1011), Expect = 9e-108, Method: Compositional matrix adjust.
Identities = 212/256 (83%), Positives = 231/256 (91%), Gaps = 1/256 (0%)
Query 10 YLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLT 69
Y+RDQ +P ++A+GGF R CVLTGKAL R PF WRE I Q WF+ VS LPT+AVS+PLT
Sbjct 11 YVRDQVRPGLEAVGGFVRMCVLTGKALFR-PFQWREFILQAWFLFRVSFLPTVAVSVPLT 69
Query 70 VLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIRE 129
VLIIFTLNILLAEFGAAD+SGAGAALGAVTQLGPL TVLV+AGAG+TAICADLGARTIRE
Sbjct 70 VLIIFTLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTIRE 129
Query 130 EIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVG 189
EIDA+EVLGIDPIHRLVVPRVVA+T VA LLNGAVITIGLVGGF+F V+IQ+VSAGAYV
Sbjct 130 EIDALEVLGIDPIHRLVVPRVVASTFVALLLNGAVITIGLVGGFIFGVYIQNVSAGAYVS 189
Query 190 TLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFA 249
TLTLVTGLPEV+ISVVK+ TFGLIAGLVGCYRGLT GG KGVGT VNETLVLCV+ALFA
Sbjct 190 TLTLVTGLPEVLISVVKATTFGLIAGLVGCYRGLTVGGGAKGVGTGVNETLVLCVVALFA 249
Query 250 TNVVLTTIGVRFGTGH 265
NVVLTTIGVRFGTG
Sbjct 250 VNVVLTTIGVRFGTGR 265
>gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900707|gb|EFG80077.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=243
Score = 388 bits (996), Expect = 6e-106, Method: Compositional matrix adjust.
Identities = 201/241 (84%), Positives = 218/241 (91%), Gaps = 1/241 (0%)
Query 25 FYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILLAEFG 84
F + CVLTGKAL R PF WRE I QGWF+ VS LPT+ V+IPLTVLIIFTLNILLAEFG
Sbjct 4 FTQMCVLTGKALAR-PFQWREFILQGWFLLGVSFLPTVMVAIPLTVLIIFTLNILLAEFG 62
Query 85 AADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHR 144
AAD+SGAGAALGAVTQLGPL TVLV+AGAG+TAICADLGARTIREEIDAMEVLGIDPIHR
Sbjct 63 AADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHR 122
Query 145 LVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISV 204
LVVPRVVA+TIVA LLNGAVI+IGLVGGF+F V+IQ+VSAGAYV TLTL+TGLPEV+IS+
Sbjct 123 LVVPRVVASTIVALLLNGAVISIGLVGGFLFGVYIQNVSAGAYVSTLTLITGLPEVLISI 182
Query 205 VKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVRFGTG 264
VK+ FGLIAGLVGCYRGLT GG KGVGTAVNETLVL V+ALFA NVVLTTIGVRFGTG
Sbjct 183 VKATLFGLIAGLVGCYRGLTAGGGAKGVGTAVNETLVLAVVALFAVNVVLTTIGVRFGTG 242
Query 265 H 265
Sbjct 243 R 243
>gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycobacterium leprae TN]
gi|221230868|ref|YP_002504284.1| hypothetical protein MLBr_02587 [Mycobacterium leprae Br4923]
gi|13093821|emb|CAC32119.1| conserved membrane protein [Mycobacterium leprae]
gi|219933975|emb|CAR72687.1| conserved membrane protein [Mycobacterium leprae Br4923]
Length=267
Score = 387 bits (995), Expect = 6e-106, Method: Compositional matrix adjust.
Identities = 192/263 (74%), Positives = 227/263 (87%), Gaps = 0/263 (0%)
Query 3 THAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTL 62
T + ++ Y + Q + +GGF+R VLTGKAL RRPF WRE I Q WFI V+ LPT+
Sbjct 5 TRSSLVEYAHTKLQTPLVLVGGFFRMLVLTGKALFRRPFQWREFILQCWFIMRVAFLPTV 64
Query 63 AVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADL 122
VSIPLTVL+IFTLN+LLA+F AAD+SGAGAA+GAVTQLGPLTTVLV+AGAG+T+ICADL
Sbjct 65 MVSIPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTSICADL 124
Query 123 GARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHV 182
GARTIREEIDAMEVLGIDPIHRLVVPRV+AAT+VA LLNG VIT+GLVGG++F V++Q+V
Sbjct 125 GARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLFGVYLQNV 184
Query 183 SAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVL 242
S GAY+ TLT +TGLPEV+I+ VK+ATFGLIAGLVGCYRGL +GG G+G AVNET+VL
Sbjct 185 SGGAYLATLTTITGLPEVVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVNETVVL 244
Query 243 CVIALFATNVVLTTIGVRFGTGH 265
CV+AL+A NVVLTTIGVRFGTGH
Sbjct 245 CVVALYAVNVVLTTIGVRFGTGH 267
>gi|333988760|ref|YP_004521374.1| hypothetical protein JDM601_0120 [Mycobacterium sp. JDM601]
gi|333484728|gb|AEF34120.1| integral membrane protein YrbE1A [Mycobacterium sp. JDM601]
Length=267
Score = 375 bits (964), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 192/258 (75%), Positives = 227/258 (88%), Gaps = 0/258 (0%)
Query 7 IITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSI 66
++ + RD+ P + +GGF+R C LT +AL PF WRE ++QGWFITSV+L+PT+AV+I
Sbjct 9 LVDFARDRVMPPLVMVGGFFRMCALTARALFMPPFQWRETLQQGWFITSVALVPTVAVAI 68
Query 67 PLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGART 126
PLTVL++FTLNILLA+FGAAD+SGAGA + AVTQLGPL TVLV+AGAG+TAICADLGART
Sbjct 69 PLTVLLVFTLNILLAQFGAADVSGAGAGIAAVTQLGPLVTVLVVAGAGSTAICADLGART 128
Query 127 IREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGA 186
IREEIDAMEVLGIDPIHRLVVPRV+AAT+VA LLN VI IGL GGF+F V++Q+VS GA
Sbjct 129 IREEIDAMEVLGIDPIHRLVVPRVIAATVVALLLNALVIVIGLAGGFLFGVYLQNVSGGA 188
Query 187 YVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIA 246
Y+ TLTL+TGLPEVIIS VK++ FGLIAGLVGCYRGLT +GG KG+GTAVNET+VLCVIA
Sbjct 189 YLSTLTLLTGLPEVIISTVKASVFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIA 248
Query 247 LFATNVVLTTIGVRFGTG 264
LFA NVVLTTIGV+FGTG
Sbjct 249 LFAVNVVLTTIGVKFGTG 266
>gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899576|gb|EFG79029.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=264
Score = 358 bits (918), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 189/265 (72%), Positives = 226/265 (86%), Gaps = 1/265 (0%)
Query 1 MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP 60
MTT + + + + +P + GGF+R CVLTGKAL ++PF WRE I GWF+ VSLLP
Sbjct 1 MTTSHPVASKVGSRLRPGTEVAGGFFRMCVLTGKAL-KQPFEWREFIWNGWFLMRVSLLP 59
Query 61 TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA 120
T+AVSIP TVL+IFTLN+LLAE GAAD+SGAGAA+GAVTQLGP+ TVLV+AGAG TAICA
Sbjct 60 TIAVSIPETVLLIFTLNLLLAEIGAADVSGAGAAIGAVTQLGPIVTVLVVAGAGGTAICA 119
Query 121 DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ 180
DLGARTIREEIDA+EVLGIDPIHRLVVPRVVA+T+VA LLNG V+ +GL GG++FSV++Q
Sbjct 120 DLGARTIREEIDALEVLGIDPIHRLVVPRVVASTMVAVLLNGLVVAVGLGGGYLFSVYLQ 179
Query 181 HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL 240
+VS+GAY+ TLT +TGLPEV+I+ +K+ATFGLIAGLVGCYRGL +GG KG+GTAVNET+
Sbjct 180 NVSSGAYLSTLTALTGLPEVVIAFIKAATFGLIAGLVGCYRGLIVRGGSKGLGTAVNETV 239
Query 241 VLCVIALFATNVVLTTIGVRFGTGH 265
VLC IALFA N LTTIGVRFGTG
Sbjct 240 VLCFIALFAVNAALTTIGVRFGTGR 264
>gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcus opacus B4]
gi|226240423|dbj|BAH50771.1| putative YrbE family protein [Rhodococcus opacus B4]
Length=267
Score = 351 bits (901), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 176/244 (73%), Positives = 205/244 (85%), Gaps = 0/244 (0%)
Query 21 AIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILL 80
A+GGF+ C T +A+ +RPF WRE + Q WFI V+LLPTL V++P TVL++FTLNILL
Sbjct 23 AVGGFFELCGETFRAMAKRPFQWRELVLQSWFIVRVALLPTLLVALPFTVLVVFTLNILL 82
Query 81 AEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGID 140
EFGAAD+SGAGA LGAVTQ+GPL TVL++AGAGATAICADLGARTIREEIDA+ VLGID
Sbjct 83 VEFGAADLSGAGAGLGAVTQIGPLVTVLIVAGAGATAICADLGARTIREEIDAIRVLGID 142
Query 141 PIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEV 200
PI RLVVPRV+A+ VA LLNG VITIGL GGF+FSV+IQ+V+ GAYV +LT VTGLPEV
Sbjct 143 PIQRLVVPRVLASMFVAVLLNGLVITIGLTGGFLFSVYIQNVTPGAYVSSLTFVTGLPEV 202
Query 201 IISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVR 260
IIS VK+ FGLIAGLV C+RGLT KGGPK VG AVNET+V +ALFA NVV+T IGV+
Sbjct 203 IISEVKATLFGLIAGLVACHRGLTVKGGPKSVGDAVNETVVYAFMALFAVNVVVTAIGVK 262
Query 261 FGTG 264
FGTG
Sbjct 263 FGTG 266
>gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898147|gb|EFG77722.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=254
Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/250 (66%), Positives = 198/250 (80%), Gaps = 0/250 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
+R+Q A+GGF+ + TG+A RRPF E +EQ W I VSL+PTL VSIP TV
Sbjct 1 MREQLAVPARAVGGFFEMMIDTGRATFRRPFQLGEFLEQTWMIARVSLVPTLLVSIPFTV 60
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+ FTLNILL E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIREE
Sbjct 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAM VLGIDP+HRLVVPRV+A+T+VA LLNG V IGL GG+VFSVF+Q V+ GA++
Sbjct 121 IDAMRVLGIDPVHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING 180
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAT 250
LT++TGL E++++ VK+ FG++AGLVGCYRGLT KGGPKGVG AVNET+V I LF
Sbjct 181 LTVLTGLRELVLAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240
Query 251 NVVLTTIGVR 260
NVV+T IGVR
Sbjct 241 NVVMTAIGVR 250
>gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobacterium kansasii ATCC 12478]
Length=254
Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/240 (68%), Positives = 196/240 (82%), Gaps = 0/240 (0%)
Query 21 AIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILL 80
A+GGF+ + TG+A +RRPF +RE ++Q W + VSL+PTL VSIP TVL+ FTLNILL
Sbjct 11 AVGGFFEMSIDTGRAALRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILL 70
Query 81 AEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGID 140
E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIREEIDAM VLGID
Sbjct 71 REIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGID 130
Query 141 PIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEV 200
PI RLVVPRV+A+T+VA LLNG V IGL GG+VFSVF+Q V+ GA++ LT++TGL E+
Sbjct 131 PIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLREL 190
Query 201 IISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVR 260
I++ VK+ FG++AGLVGCYRGLT KGGPKGVG AVNET+V I LF NVV+T IGVR
Sbjct 191 ILAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAIGVR 250
>gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465663|ref|YP_879935.1| hypothetical protein MAV_0655 [Mycobacterium avium 104]
gi|254773611|ref|ZP_05215127.1| hypothetical protein MaviaA2_02900 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41395009|gb|AAS02879.1| hypothetical protein MAP_0562 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166950|gb|ABK67847.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336458448|gb|EGO37422.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=254
Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/248 (66%), Positives = 197/248 (80%), Gaps = 0/248 (0%)
Query 13 DQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLI 72
+Q A+GGF+ + TG+A RRPF + E ++Q W I VSL+PTL VSIP TVL+
Sbjct 3 EQLAVPARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLV 62
Query 73 IFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEID 132
FTLNILL E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLT 192
AM VLGIDPIHRLVVPRV+A+T+VA LLNG V IGL GG+VFSVF+Q V+ GA++ LT
Sbjct 123 AMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLT 182
Query 193 LVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNV 252
++TGL E++++ VK+ FG++AG+VGCYRGLT KGGPKGVG AVNET+V I LF NV
Sbjct 183 VLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINV 242
Query 253 VLTTIGVR 260
V+T IGVR
Sbjct 243 VMTAIGVR 250
>gi|342862240|ref|ZP_08718882.1| hypothetical protein MCOL_25241 [Mycobacterium colombiense CECT
3035]
gi|342130318|gb|EGT83638.1| hypothetical protein MCOL_25241 [Mycobacterium colombiense CECT
3035]
Length=254
Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/250 (66%), Positives = 198/250 (80%), Gaps = 0/250 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
+R+Q A+GGF+ + TG+A RRPF + E ++Q W I VSL+PTL VSIP TV
Sbjct 1 MREQLAVPARAVGGFFEMMLDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTV 60
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+ FTLNILL E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIREE
Sbjct 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAM VLGIDPI RLVVPRV+A+T+VA LLNG V IGL GG+VFSVF+Q V+ GA++
Sbjct 121 IDAMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING 180
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAT 250
LT++TGL E++++ VK+ FG++AG+VGCYRGLT KGGPKGVG AVNET+V I LF
Sbjct 181 LTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240
Query 251 NVVLTTIGVR 260
NVV+T IGVR
Sbjct 241 NVVMTAIGVR 250
>gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c [Mycobacterium abscessus ATCC
19977]
gi|169243200|emb|CAM64228.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=255
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/255 (65%), Positives = 196/255 (77%), Gaps = 0/255 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
++ Q A+GGF + T + + RRPF +E ++Q WFI VSLLPTL V+IP TV
Sbjct 1 MKQQLAAPARAVGGFVSMSLATFRNIFRRPFQGQEFLDQTWFIARVSLLPTLLVAIPFTV 60
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+ FTLNILL E GAAD+SGA A G VTQLGP+ TVLV+AGAGATAICADLGARTIREE
Sbjct 61 LVAFTLNILLREIGAADLSGAATAFGTVTQLGPVVTVLVVAGAGATAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAM+VLGIDPI RLVVPRV+A+T VA LLNG V IG+VGG+VFSVF+Q V+ GA++
Sbjct 121 IDAMQVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGMVGGYVFSVFLQGVNPGAFING 180
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAT 250
LT++TGL E++IS VK+ FG+ AGLVGCYRGLT KGGPKGVG AVNET+V I LF
Sbjct 181 LTVLTGLGELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVNETVVYAFICLFVI 240
Query 251 NVVLTTIGVRFGTGH 265
NVV+T IGVR H
Sbjct 241 NVVMTAIGVRVLVKH 255
>gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
gi|118571364|gb|ABL06115.1| conserved membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
Length=279
Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/252 (65%), Positives = 196/252 (78%), Gaps = 0/252 (0%)
Query 9 TYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPL 68
T L Q A+GGF+ + T +A RRPF +RE ++Q W + VSL+PTL VSIP
Sbjct 24 TELIQQLAVPARAVGGFFEMSIDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPF 83
Query 69 TVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIR 128
TVL+ FTLNILL E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIR
Sbjct 84 TVLVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIR 143
Query 129 EEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYV 188
EEIDAM VLGIDPI RLVVPRV+A+T+VA LLNG V IGL GG+ FSVF+Q V+ GA++
Sbjct 144 EEIDAMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFI 203
Query 189 GTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALF 248
LT++TGL E+I++ +K+ FG++AGLVGCYRGLT KGGPKGVG AVNET+V I LF
Sbjct 204 NGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLF 263
Query 249 ATNVVLTTIGVR 260
NVV+T IGVR
Sbjct 264 VINVVMTAIGVR 275
>gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
H37Rv]
gi|31794677|ref|NP_857170.1| integral membrane protein YrbE4a [Mycobacterium bovis AF2122/97]
gi|121639420|ref|YP_979644.1| integral membrane protein YrbE4a [Mycobacterium bovis BCG str.
Pasteur 1173P2]
79 more sequence titles
Length=254
Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/240 (67%), Positives = 193/240 (81%), Gaps = 0/240 (0%)
Query 21 AIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILL 80
A+GGF+ + T +A RRPF +RE ++Q W + VSL+PTL VSIP TVL+ FTLNILL
Sbjct 11 AVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILL 70
Query 81 AEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGID 140
E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIREEIDAM VLGID
Sbjct 71 REIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGID 130
Query 141 PIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEV 200
PI RLVVPRV+A+T+VA LLNG V IGL GG+ FSVF+Q V+ GA++ LT++TGL E+
Sbjct 131 PIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLREL 190
Query 201 IISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVR 260
I++ +K+ FG++AGLVGCYRGLT KGGPKGVG AVNET+V I LF NVV+T IGVR
Sbjct 191 ILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAIGVR 250
>gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395205|gb|AAS03074.1| hypothetical protein MAP_0757 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=260
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/251 (63%), Positives = 195/251 (78%), Gaps = 1/251 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
L+ A+ A+G + K L RRPF WRE +EQ WF+ VSL PTL V+IP TV
Sbjct 6 LKVDMSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTV 65
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+ FTLNILL E GAAD+SGAGAA GAVTQLGPL TVL++AGAGATA+CADLG+RTIREE
Sbjct 66 LVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREE 125
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAMEVLGI+PI RLV PR++A+ +VA LLN V+ IG++GG+VFSVF+Q V+ GA+
Sbjct 126 IDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAG 185
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLT-TKGGPKGVGTAVNETLVLCVIALFA 249
+TL+TG+PEV+IS +K+A FGLIAGLV CYRGL+ T GG K VG AVNET+V ++LF
Sbjct 186 ITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFV 245
Query 250 TNVVLTTIGVR 260
NVV+T IG++
Sbjct 246 VNVVVTAIGIK 256
>gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=260
Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/251 (63%), Positives = 195/251 (78%), Gaps = 1/251 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
L+ A+ A+G + K L RRPF WRE +EQ WF+ VSL PTL V+IP TV
Sbjct 6 LKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTV 65
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+ FTLNILL E GAAD+SGAGAA GAVTQLGPL TVL++AGAGATA+CADLG+RTIREE
Sbjct 66 LVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREE 125
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAMEVLGI+PI RLV PR++A+ +VA LLN V+ IG++GG+VFSVF+Q V+ GA+
Sbjct 126 IDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAG 185
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLT-TKGGPKGVGTAVNETLVLCVIALFA 249
+TL+TG+PEV+IS +K+A FGLIAGLV CYRGL+ T GG K VG AVNET+V ++LF
Sbjct 186 ITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFV 245
Query 250 TNVVLTTIGVR 260
NVV+T IG++
Sbjct 246 VNVVVTAIGIK 256
>gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [Mycobacterium sp. MCS]
gi|119870736|ref|YP_940688.1| hypothetical protein Mkms_4707 [Mycobacterium sp. KMS]
gi|108772001|gb|ABG10723.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119696825|gb|ABL93898.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
Length=254
Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/250 (63%), Positives = 194/250 (78%), Gaps = 0/250 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
+++Q A+GGF + T RRPF +RE ++Q W I VSL+PTL V+IP TV
Sbjct 1 MKEQLAAPARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTV 60
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+ FTLNILL E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIREE
Sbjct 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAM VLGIDPI RLVVPRV+A+T VA LLNG V IGL GG+VFSVF+Q V+ GA++
Sbjct 121 IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING 180
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAT 250
LT++TGL E++++ +K+ FG++AGLVGCYRGLT +GGPKGVG AVNET+V I LF
Sbjct 181 LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVI 240
Query 251 NVVLTTIGVR 260
NV++T +GVR
Sbjct 241 NVIMTAVGVR 250
>gi|315443550|ref|YP_004076429.1| ABC transporter involved in resistance to organic solvents, permease
[Mycobacterium sp. Spyr1]
gi|315261853|gb|ADT98594.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium sp. Spyr1]
Length=269
Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/255 (62%), Positives = 198/255 (78%), Gaps = 1/255 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
L + A+ A+GGF+ + + + RPF WRE +EQ WF+ VS+ PTL V+IP TV
Sbjct 15 LPNGVSGAMQAVGGFFSMALDAVRFVFVRPFQWREFLEQSWFVAKVSMAPTLLVAIPFTV 74
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+ FTLNILL E GAAD+SGAGAA GAVTQ+GPL TVL++AGAGATA+CADLG+RTIREE
Sbjct 75 LVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREE 134
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAMEVLGI+P+ RLV PR++A+ +VA LLN V+ IG++GG+ FS+F+Q V+ GA+
Sbjct 135 IDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFAAG 194
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLT-TKGGPKGVGTAVNETLVLCVIALFA 249
+TL+TG+PEVIIS VK+A FGLIAGLV CYRGLT T GG K VG AVNET+V +ALF
Sbjct 195 ITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMALFV 254
Query 250 TNVVLTTIGVRFGTG 264
NVV+T IG+R TG
Sbjct 255 INVVVTAIGIRMTTG 269
>gi|333992272|ref|YP_004524886.1| hypothetical protein JDM601_3632 [Mycobacterium sp. JDM601]
gi|333488240|gb|AEF37632.1| membrane protein YrbE4A [Mycobacterium sp. JDM601]
Length=254
Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/248 (64%), Positives = 192/248 (78%), Gaps = 0/248 (0%)
Query 13 DQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLI 72
+Q A+GGF + T +A+ RRPF +RE ++Q W I VSL+PTL V+IP TVL+
Sbjct 3 EQLTVPARAVGGFVEMSIDTFRAMFRRPFQYREFLDQTWMIARVSLVPTLLVAIPFTVLV 62
Query 73 IFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEID 132
FTLNILL E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLT 192
AM VLGIDPI RLVVPR +A+T VA LLNG V IGLVGG+VFSVF+Q V+ GA++ LT
Sbjct 123 AMRVLGIDPIQRLVVPRALASTFVALLLNGLVCAIGLVGGYVFSVFLQGVNPGAFINGLT 182
Query 193 LVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNV 252
++TGL E++++ +K+ FG AGL+GCYRGLT KGGP+GVG AVNET+V I LF NV
Sbjct 183 VLTGLGELVMAEIKALLFGTAAGLIGCYRGLTAKGGPQGVGNAVNETVVYAFICLFVINV 242
Query 253 VLTTIGVR 260
V+T I VR
Sbjct 243 VMTAISVR 250
>gi|336461223|gb|EGO40099.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=272
Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/251 (63%), Positives = 195/251 (78%), Gaps = 1/251 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
L+ A+ A+G + K L RRPF WRE +EQ WF+ VSL PTL V+IP TV
Sbjct 18 LKVDMSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTV 77
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+ FTLNILL E GAAD+SGAGAA GAVTQLGPL TVL++AGAGATA+CADLG+RTIREE
Sbjct 78 LVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREE 137
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAMEVLGI+PI RLV PR++A+ +VA LLN V+ IG++GG+VFSVF+Q V+ GA+
Sbjct 138 IDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAG 197
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLT-TKGGPKGVGTAVNETLVLCVIALFA 249
+TL+TG+PEV+IS +K+A FGLIAGLV CYRGL+ T GG K VG AVNET+V ++LF
Sbjct 198 ITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFV 257
Query 250 TNVVLTTIGVR 260
NVV+T IG++
Sbjct 258 VNVVVTAIGIK 268
>gi|145223093|ref|YP_001133771.1| hypothetical protein Mflv_2506 [Mycobacterium gilvum PYR-GCK]
gi|145215579|gb|ABP44983.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
Length=269
Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/248 (64%), Positives = 196/248 (80%), Gaps = 1/248 (0%)
Query 18 AVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLN 77
A+ A+GGF+ + + + RPF WRE +EQ WF+ VS+ PTL V+IP TVL+ FTLN
Sbjct 22 AMQAVGGFFSMALDAVRFVFVRPFQWREFLEQSWFVAKVSMAPTLLVAIPFTVLVSFTLN 81
Query 78 ILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVL 137
ILL E GAAD+SGAGAA GAVTQ+GPL TVL++AGAGATA+CADLG+RTIREEIDAMEVL
Sbjct 82 ILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVL 141
Query 138 GIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGL 197
GI+P+ RLV PR++A+ +VA LLN V+ IG++GG+ FS+F+Q V+ GA+ +TL+TG+
Sbjct 142 GINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFAAGITLLTGV 201
Query 198 PEVIISVVKSATFGLIAGLVGCYRGLT-TKGGPKGVGTAVNETLVLCVIALFATNVVLTT 256
PEVIIS VK+A FGLIAGLV CYRGLT T GG K VG AVNET+V +ALF NVV+T
Sbjct 202 PEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMALFVINVVVTA 261
Query 257 IGVRFGTG 264
IG+R TG
Sbjct 262 IGIRMTTG 269
>gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium 104]
gi|118165036|gb|ABK65933.1| TrnB1 protein [Mycobacterium avium 104]
Length=272
Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/251 (63%), Positives = 195/251 (78%), Gaps = 1/251 (0%)
Query 11 LRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTV 70
L+ A+ A+G + K L RRPF WRE +EQ WF+ VSL PTL V+IP TV
Sbjct 18 LKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTV 77
Query 71 LIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREE 130
L+ FTLNILL E GAAD+SGAGAA GAVTQLGPL TVL++AGAGATA+CADLG+RTIREE
Sbjct 78 LVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREE 137
Query 131 IDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGT 190
IDAMEVLGI+PI RLV PR++A+ +VA LLN V+ IG++GG+VFSVF+Q V+ GA+
Sbjct 138 IDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAG 197
Query 191 LTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLT-TKGGPKGVGTAVNETLVLCVIALFA 249
+TL+TG+PEV+IS +K+A FGLIAGLV CYRGL+ T GG K VG AVNET+V ++LF
Sbjct 198 ITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFV 257
Query 250 TNVVLTTIGVR 260
NVV+T IG++
Sbjct 258 VNVVVTAIGIK 268
>gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 [Mycobacterium sp. JLS]
gi|126237366|gb|ABO00767.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=254
Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 157/248 (64%), Positives = 193/248 (78%), Gaps = 0/248 (0%)
Query 13 DQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLI 72
+Q A+GGF + T + RRPF +RE ++Q W I VSL+PTL V+IP TVL+
Sbjct 3 EQLAAPARAVGGFVDMSIDTFVKMFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTVLV 62
Query 73 IFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEID 132
FTLNILL E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLT 192
AM VLGIDPI RLVVPRV+A+T VA LLNG V IGL GG+VFSVF+Q V+ GA++ LT
Sbjct 123 AMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLT 182
Query 193 LVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNV 252
++TGL E++++ +K+ FG++AGLVGCYRGLT +GGPKGVG AVNET+V I LF NV
Sbjct 183 VLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINV 242
Query 253 VLTTIGVR 260
++T +GVR
Sbjct 243 IMTAVGVR 250
>gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 [Mycobacterium marinum M]
gi|183178006|gb|ACC43116.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=268
Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 160/254 (63%), Positives = 200/254 (79%), Gaps = 3/254 (1%)
Query 8 ITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIP 67
IT+ R ++P + A+GG + K RRPF WRE +EQ WF+ V++LPTL V+IP
Sbjct 13 ITFGRG-SKP-MQAVGGLFAMSADAIKFAFRRPFQWREFLEQSWFVARVAMLPTLLVAIP 70
Query 68 LTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTI 127
TVL+ FTLNILL E GAAD+SGAGAA GAVTQ+GPL TVL++AGAGATA+CADLG+RTI
Sbjct 71 FTVLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTI 130
Query 128 REEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAY 187
REEIDAMEVLGI+P+ RLV PR++A+ +VA LLN V+ IG+VGG+VFSVF+Q V+ GA+
Sbjct 131 REEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAF 190
Query 188 VGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLT-TKGGPKGVGTAVNETLVLCVIA 246
+TL+TG+PEVIIS VK+A FGLIAGLV CYRGLT + GG K VG AVNET+V ++
Sbjct 191 AAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTISGGGAKAVGNAVNETVVYAFMS 250
Query 247 LFATNVVLTTIGVR 260
LF NVV+T IG+R
Sbjct 251 LFVVNVVVTAIGIR 264
>gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_13895 [Mycobacterium kansasii ATCC
12478]
Length=247
Score = 311 bits (796), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 155/243 (64%), Positives = 193/243 (80%), Gaps = 1/243 (0%)
Query 19 VDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNI 78
+ A+GG + K + RRPF WRE +EQ WF+ VS+ PTL V+IP TVL+ FTLNI
Sbjct 1 MQAVGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVSMAPTLLVAIPFTVLVSFTLNI 60
Query 79 LLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLG 138
LL E GAAD+SGAGAA GAVTQ+GPL TVL++AGAGATA+CADLG+RTIREEIDAMEVLG
Sbjct 61 LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLG 120
Query 139 IDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLP 198
I+P+ RLV PR++A+ +VA LLN V+ IG++GG+VFSVF+Q V+ GA+ +TL+TG+P
Sbjct 121 INPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYVFSVFVQDVNPGAFAAGITLLTGVP 180
Query 199 EVIISVVKSATFGLIAGLVGCYRGLT-TKGGPKGVGTAVNETLVLCVIALFATNVVLTTI 257
EVIIS VK+A FGLIAGLV CYRGLT + GG K VG AVNET+V ++LF NVV+T I
Sbjct 181 EVIISCVKAALFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 240
Query 258 GVR 260
G+R
Sbjct 241 GIR 243
>gi|342860430|ref|ZP_08717081.1| hypothetical protein MCOL_16186 [Mycobacterium colombiense CECT
3035]
gi|342132085|gb|EGT85326.1| hypothetical protein MCOL_16186 [Mycobacterium colombiense CECT
3035]
Length=260
Score = 311 bits (796), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 158/249 (64%), Positives = 195/249 (79%), Gaps = 2/249 (0%)
Query 13 DQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLI 72
D + P + A+G + K L RRPF WRE +EQ WF+ VSL PTL V+IP TVL+
Sbjct 9 DLSGP-MHAVGALFAMSADAVKFLFRRPFQWREFLEQSWFVARVSLAPTLLVAIPFTVLV 67
Query 73 IFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEID 132
FTLNILL E GAAD+SGAGAA GAVTQLGPL TVL++AGAGATA+CADLG+RTIREEID
Sbjct 68 SFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTIREEID 127
Query 133 AMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLT 192
AMEVLGI+PI RLV PR++A+ +VA LLN V+ IG++GG+VFSVF+Q V+ GA+ +T
Sbjct 128 AMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAFAAGIT 187
Query 193 LVTGLPEVIISVVKSATFGLIAGLVGCYRGLT-TKGGPKGVGTAVNETLVLCVIALFATN 251
L+TG+PEV+IS VK+A FGLIAGLV CYRGL+ T GG K VG AVNET+V ++LF N
Sbjct 188 LLTGVPEVVISCVKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMSLFVVN 247
Query 252 VVLTTIGVR 260
VV+T IG++
Sbjct 248 VVVTAIGIK 256
>gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [Mycobacterium smegmatis str.
MC2 155]
gi|118171324|gb|ABK72220.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=254
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/248 (64%), Positives = 192/248 (78%), Gaps = 0/248 (0%)
Query 13 DQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLI 72
+Q A+GGF + T + RRPF +E ++Q W I VSL+PTL V+IP TVL+
Sbjct 3 EQLAVPARAVGGFVEMSLDTFAKIFRRPFQLKEFLDQTWMIARVSLVPTLLVAIPFTVLV 62
Query 73 IFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEID 132
FTLNILL E GAAD+SGAG A G +TQLGP+ TVLV+AGAGATAICADLGARTIREEID
Sbjct 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122
Query 133 AMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLT 192
AM VLGIDPI RLVVPRV+A+T VA LLNG V IGL GG+VFSVF+Q V+ GA++ LT
Sbjct 123 AMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLT 182
Query 193 LVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNV 252
++TGL E++++ +K+ FG++AGLVGCYRGLT KGGPKGVG AVNET+V I LF NV
Sbjct 183 VLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINV 242
Query 253 VLTTIGVR 260
++T +GVR
Sbjct 243 IMTAVGVR 250
>gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycobacterium marinum M]
gi|183178283|gb|ACC43393.1| conserved membrane protein YrbE4A [Mycobacterium marinum M]
Length=237
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/229 (69%), Positives = 186/229 (82%), Gaps = 0/229 (0%)
Query 32 TGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILLAEFGAADISGA 91
T +A RRPF +RE ++Q W + VSL+PTL VSIP TVL+ FTLNILL E GAAD+SGA
Sbjct 5 TARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSGA 64
Query 92 GAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVV 151
G A G +TQLGP+ TVLV+AGAGATAICADLGARTIREEIDAM VLGIDPI RLVVPRV+
Sbjct 65 GTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVL 124
Query 152 AATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATFG 211
A+T+VA LLNG V IGL GG+ FSVF+Q V+ GA++ LT++TGL E+I++ +K+ FG
Sbjct 125 ASTVVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFG 184
Query 212 LIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVR 260
++AGLVGCYRGLT KGGPKGVG AVNET+V I LF NVV+T IGVR
Sbjct 185 VMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAIGVR 233
>gi|315442585|ref|YP_004075464.1| ABC transporter involved in resistance to organic solvents, permease
[Mycobacterium sp. Spyr1]
gi|315260888|gb|ADT97629.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium sp. Spyr1]
Length=237
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/223 (70%), Positives = 183/223 (83%), Gaps = 0/223 (0%)
Query 38 RRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGA 97
RRPF +RE +EQ W I VSL+PTL V+IP TVL+ FTLNILL E GAAD+SGAG A G
Sbjct 11 RRPFQFREFLEQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREIGAADLSGAGTAFGT 70
Query 98 VTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVA 157
+TQLGP+ TVLV+AGAGATAICADLGARTIREEIDAM VLGIDPI RLVVPRV+A+T VA
Sbjct 71 ITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVA 130
Query 158 ALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLV 217
LLNG V IGL GG+VFSVF+Q V+ G+++ LT++TGLPE+I++ +K+ FG +AGLV
Sbjct 131 LLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILAEIKALLFGFVAGLV 190
Query 218 GCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVR 260
GCYRGLT KGGPKGVG AVNET+V I LF NV++T IGVR
Sbjct 191 GCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAIGVR 233
>gi|145222146|ref|YP_001132824.1| hypothetical protein Mflv_1554 [Mycobacterium gilvum PYR-GCK]
gi|145214632|gb|ABP44036.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
Length=237
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/223 (70%), Positives = 184/223 (83%), Gaps = 0/223 (0%)
Query 38 RRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGA 97
RRPF +RE +EQ W I VSL+PTL V+IP TVL+ FTLNILL E GAAD+SGAG A G
Sbjct 11 RRPFQFREFLEQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREIGAADLSGAGTAFGT 70
Query 98 VTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVA 157
+TQLGP+ TVLV+AGAGATAICADLGARTIREEIDAM VLGIDPI RLVVPRV+A+T VA
Sbjct 71 ITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVA 130
Query 158 ALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLV 217
LLNG V IGL GG+VFSVF+Q V+ G+++ LT++TGLPE+I++ +K+ FG++AGLV
Sbjct 131 LLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILAEIKALLFGVVAGLV 190
Query 218 GCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVR 260
GCYRGLT KGGPKGVG AVNET+V I LF NV++T IGVR
Sbjct 191 GCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAIGVR 233
>gi|254822745|ref|ZP_05227746.1| hypothetical protein MintA_22639 [Mycobacterium intracellulare
ATCC 13950]
Length=237
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/229 (69%), Positives = 187/229 (82%), Gaps = 0/229 (0%)
Query 32 TGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILLAEFGAADISGA 91
TG+A RRPF + E ++Q W I VSL+PTL VSIP TVL+ FTLNILL E GAAD+SGA
Sbjct 5 TGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSGA 64
Query 92 GAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVV 151
G A G +TQLGP+ TVLV+AGAGATAICADLGARTIREEIDAM VLGIDPI RLVVPRV+
Sbjct 65 GTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVL 124
Query 152 AATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATFG 211
A+T+VA LLNG V IGL GG+VFSVF+Q V+ GA++ LT++TGL E++++ VK+ FG
Sbjct 125 ASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFG 184
Query 212 LIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVR 260
++AG+VGCYRGLT KGGPKGVG AVNET+V I LF NVV+T IGVR
Sbjct 185 VMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAIGVR 233
>gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycobacterium tuberculosis CDC1551]
gi|13883459|gb|AAK47964.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=237
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/229 (69%), Positives = 186/229 (82%), Gaps = 0/229 (0%)
Query 32 TGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILLAEFGAADISGA 91
T +A RRPF +RE ++Q W + VSL+PTL VSIP TVL+ FTLNILL E GAAD+SGA
Sbjct 5 TARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSGA 64
Query 92 GAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVV 151
G A G +TQLGP+ TVLV+AGAGATAICADLGARTIREEIDAM VLGIDPI RLVVPRV+
Sbjct 65 GTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVL 124
Query 152 AATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATFG 211
A+T+VA LLNG V IGL GG+ FSVF+Q V+ GA++ LT++TGL E+I++ +K+ FG
Sbjct 125 ASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFG 184
Query 212 LIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTIGVR 260
++AGLVGCYRGLT KGGPKGVG AVNET+V I LF NVV+T IGVR
Sbjct 185 VMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAIGVR 233
Lambda K H
0.326 0.141 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 401076841216
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40