BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0588 Length=295 Score E Sequences producing significant alignments: (Bits) Value gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [M... 573 8e-162 gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycob... 572 2e-161 gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycob... 572 2e-161 gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycoba... 572 3e-161 gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yr... 571 4e-161 gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yr... 570 8e-161 gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane p... 478 4e-133 gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770... 477 1e-132 gi|342858888|ref|ZP_08715542.1| hypothetical protein MCOL_08428 ... 454 7e-126 gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Myc... 450 1e-124 gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_202... 448 6e-124 gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycob... 447 7e-124 gi|336460597|gb|EGO39490.1| ABC-type transport system involved i... 446 2e-123 gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycoba... 398 6e-109 gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 ... 397 7e-109 gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1... 393 2e-107 gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_0265... 392 4e-107 gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cass... 391 8e-107 gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [My... 390 1e-106 gi|342859378|ref|ZP_08716032.1| hypothetical protein MCOL_10878 ... 390 2e-106 gi|333988761|ref|YP_004521375.1| hypothetical protein JDM601_012... 389 3e-106 gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [... 389 4e-106 gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 ... 385 3e-105 gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Myc... 385 3e-105 gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569... 383 1e-104 gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b... 374 8e-102 gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB] 373 2e-101 gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [M... 373 2e-101 gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane p... 372 3e-101 gi|340625205|ref|YP_004743657.1| hypothetical protein MCAN_01741... 370 1e-100 gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [My... 370 1e-100 gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tubercu... 370 2e-100 gi|118471402|ref|YP_884549.1| ABC transporter transmembrane prot... 367 1e-99 gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cass... 354 1e-95 gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycob... 352 4e-95 gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cass... 336 3e-90 gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcu... 326 3e-87 gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcu... 323 2e-86 gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346... 305 6e-81 gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 ... 298 8e-79 gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [My... 291 7e-77 gi|333918570|ref|YP_004492151.1| putative YrbE family protein [A... 289 4e-76 gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcu... 288 5e-76 gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 ... 288 8e-76 gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 ... 287 1e-75 gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [M... 286 3e-75 gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [My... 286 4e-75 gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium... 285 5e-75 gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avi... 285 5e-75 gi|342860431|ref|ZP_08717082.1| TrnB2 protein [Mycobacterium col... 285 6e-75 >gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Rv] gi|31791770|ref|NP_854263.1| integral membrane protein YrbE2b [Mycobacterium bovis AF2122/97] gi|121636506|ref|YP_976729.1| integral membrane protein YrbE2b [Mycobacterium bovis BCG str. Pasteur 1173P2] 52 more sequence titles Length=295 Score = 573 bits (1478), Expect = 8e-162, Method: Compositional matrix adjust. Identities = 295/295 (100%), Positives = 295/295 (100%), Gaps = 0/295 (0%) Query 1 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR Sbjct 1 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 Query 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA Sbjct 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 Query 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL Sbjct 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 Query 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV Sbjct 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 Query 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV Sbjct 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289712231|gb|EFD76243.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|326902420|gb|EGE49353.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis W-148] Length=295 Score = 572 bits (1474), Expect = 2e-161, Method: Compositional matrix adjust. Identities = 294/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%) Query 1 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR Sbjct 1 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 Query 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVE FTGFFAA Sbjct 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAA 120 Query 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL Sbjct 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 Query 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV Sbjct 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 Query 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV Sbjct 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289693214|gb|EFD60643.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length=295 Score = 572 bits (1474), Expect = 2e-161, Method: Compositional matrix adjust. Identities = 294/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%) Query 1 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 MVESSTASA AVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR Sbjct 1 MVESSTASATAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 Query 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA Sbjct 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 Query 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL Sbjct 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 Query 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV Sbjct 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 Query 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV Sbjct 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycobacterium tuberculosis CDC1551] gi|254230928|ref|ZP_04924255.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|254363546|ref|ZP_04979592.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|13880132|gb|AAK44841.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124599987|gb|EAY58997.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|134149060|gb|EBA41105.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|323720940|gb|EGB30005.1| hypothetical protein TMMG_03291 [Mycobacterium tuberculosis CDC1551A] Length=295 Score = 572 bits (1473), Expect = 3e-161, Method: Compositional matrix adjust. Identities = 294/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%) Query 1 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR Sbjct 1 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 Query 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA Sbjct 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 Query 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL Sbjct 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 Query 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV Sbjct 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 Query 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 MI HCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV Sbjct 241 MIIHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289568521|ref|ZP_06448748.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289749085|ref|ZP_06508463.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] gi|289414896|gb|EFD12136.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289542275|gb|EFD45923.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289689672|gb|EFD57101.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] Length=295 Score = 571 bits (1472), Expect = 4e-161, Method: Compositional matrix adjust. Identities = 293/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%) Query 1 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 MVESSTASA AVLRARYPRTAASLDRYGGGTARRLERTGTFARFTR+SVVQIGWALRRYR Sbjct 1 MVESSTASATAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRVSVVQIGWALRRYR 60 Query 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA Sbjct 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 Query 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL Sbjct 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 Query 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV Sbjct 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 Query 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV Sbjct 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 >gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] gi|289437473|gb|EFD19966.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] Length=294 Score = 570 bits (1469), Expect = 8e-161, Method: Compositional matrix adjust. Identities = 293/294 (99%), Positives = 294/294 (100%), Gaps = 0/294 (0%) Query 2 VESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRR 61 +ESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRR Sbjct 1 MESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRR 60 Query 62 ETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAAL 121 ETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAAL Sbjct 61 ETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAAL 120 Query 122 ANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLV 181 ANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLV Sbjct 121 ANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLV 180 Query 182 VIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVM 241 VIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVM Sbjct 181 VIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVM 240 Query 242 ITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 ITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV Sbjct 241 ITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 294 >gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis H37Ra] gi|254549543|ref|ZP_05139990.1| hypothetical protein Mtube_03620 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297633082|ref|ZP_06950862.1| hypothetical protein MtubK4_03110 [Mycobacterium tuberculosis KZN 4207] gi|297730060|ref|ZP_06959178.1| hypothetical protein MtubKR_03155 [Mycobacterium tuberculosis KZN R506] gi|313657387|ref|ZP_07814267.1| hypothetical protein MtubKV_03145 [Mycobacterium tuberculosis KZN V2475] Length=246 Score = 478 bits (1231), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 245/246 (99%), Positives = 246/246 (100%), Gaps = 0/246 (0%) Query 50 VQIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNI 109 +QIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNI Sbjct 1 MQIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNI 60 Query 110 GVEAFTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSIS 169 GVEAFTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSIS Sbjct 61 GVEAFTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSIS 120 Query 170 FLVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWS 229 FLVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWS Sbjct 121 FLVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWS 180 Query 230 VVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDP 289 VVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDP Sbjct 181 VVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDP 240 Query 290 NFNLTV 295 NFNLTV Sbjct 241 NFNLTV 246 >gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770 [Mycobacterium tuberculosis 210] gi|339293631|gb|AEJ45742.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079] gi|339297272|gb|AEJ49382.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180] Length=246 Score = 477 bits (1227), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 244/246 (99%), Positives = 245/246 (99%), Gaps = 0/246 (0%) Query 50 VQIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNI 109 +QIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNI Sbjct 1 MQIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNI 60 Query 110 GVEAFTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSIS 169 GVE FTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSIS Sbjct 61 GVETFTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSIS 120 Query 170 FLVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWS 229 FLVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWS Sbjct 121 FLVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWS 180 Query 230 VVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDP 289 VVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDP Sbjct 181 VVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDP 240 Query 290 NFNLTV 295 NFNLTV Sbjct 241 NFNLTV 246 >gi|342858888|ref|ZP_08715542.1| hypothetical protein MCOL_08428 [Mycobacterium colombiense CECT 3035] gi|342133129|gb|EGT86332.1| hypothetical protein MCOL_08428 [Mycobacterium colombiense CECT 3035] Length=289 Score = 454 bits (1168), Expect = 7e-126, Method: Compositional matrix adjust. Identities = 271/288 (95%), Positives = 279/288 (97%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 + AAVLRARYPRTAA+L+RYGGGTARRL R G FARF RISV QIGWALR YRRETLRLV Sbjct 2 ATAAVLRARYPRTAANLNRYGGGTARRLWRIGIFARFARISVGQIGWALRHYRRETLRLV 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR+A Sbjct 62 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 APIV+GV LAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL VI+PLY Sbjct 122 APIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLGVIVPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSV+EVVIIAVVVMITHCYY Sbjct 182 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVLEVVIIAVVVMITHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLA+LALYGVDPNFNLTV Sbjct 242 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 289 >gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Mycobacterium avium 104] gi|118168593|gb|ABK69490.1| conserved hypothetical protein [Mycobacterium avium 104] Length=292 Score = 450 bits (1157), Expect = 1e-124, Method: Compositional matrix adjust. Identities = 267/288 (93%), Positives = 274/288 (96%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 SA LRARYPRTAA+LDRYGGGT RRL + G FARF RIS+ QIGWALR YRRETLRLV Sbjct 5 SAPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQIGWALRHYRRETLRLV 64 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR+A Sbjct 65 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIA 124 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 APIV+GV LAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL VI+PLY Sbjct 125 APIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLY 184 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSV EVVIIAVVVMITHCYY Sbjct 185 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCYY 244 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GYTASGGPVGVG AVGRSMRFSLVSVVVVVLLA+LALYGVDPNFNLTV Sbjct 245 GYTASGGPVGVGHAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 292 >gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_20266 [Mycobacterium avium subsp. avium ATCC 25291] Length=292 Score = 448 bits (1152), Expect = 6e-124, Method: Compositional matrix adjust. Identities = 265/288 (93%), Positives = 274/288 (96%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 SA LRARYPRTAA+LDRYGGGT RRL + G FARF R+S+ QIGWALR YRRETLRLV Sbjct 5 SAPGALRARYPRTAANLDRYGGGTVRRLWQIGVFARFARVSIGQIGWALRHYRRETLRLV 64 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR+A Sbjct 65 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIA 124 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 APIV+GV LAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL VI+PLY Sbjct 125 APIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLY 184 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGW+V EVVIIAVVVMITHCYY Sbjct 185 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWAVFEVVIIAVVVMITHCYY 244 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GYTASGGPVGVG AVGRSMRFSLVSVVVVVLLA+LALYGVDPNFNLTV Sbjct 245 GYTASGGPVGVGHAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 292 >gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399015|gb|AAS06633.1| hypothetical protein MAP_4083 [Mycobacterium avium subsp. paratuberculosis K-10] Length=292 Score = 447 bits (1151), Expect = 7e-124, Method: Compositional matrix adjust. Identities = 266/288 (93%), Positives = 273/288 (95%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 SA LRARYPRTAA+LDRYGGGT RRL + G FARF RIS+ Q GWALR YRRETLRLV Sbjct 5 SAPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQTGWALRHYRRETLRLV 64 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR+A Sbjct 65 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIA 124 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 APIV+GV LAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL VI+PLY Sbjct 125 APIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLY 184 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSV EVVIIAVVVMITHCYY Sbjct 185 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCYY 244 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GYTASGGPVGVG AVGRSMRFSLVSVVVVVLLA+LALYGVDPNFNLTV Sbjct 245 GYTASGGPVGVGHAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 292 >gi|336460597|gb|EGO39490.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium avium subsp. paratuberculosis S397] Length=292 Score = 446 bits (1148), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 265/288 (93%), Positives = 272/288 (95%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S LRARYPRTAA+LDRYGGGT RRL + G FARF RIS+ Q GWALR YRRETLRLV Sbjct 5 SVPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQTGWALRHYRRETLRLV 64 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR+A Sbjct 65 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIA 124 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 APIV+GV LAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL VI+PLY Sbjct 125 APIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLY 184 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSV EVVIIAVVVMITHCYY Sbjct 185 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCYY 244 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GYTASGGPVGVG AVGRSMRFSLVSVVVVVLLA+LALYGVDPNFNLTV Sbjct 245 GYTASGGPVGVGHAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV 292 >gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycobacterium leprae TN] gi|221230869|ref|YP_002504285.1| hypothetical protein MLBr_02588 [Mycobacterium leprae Br4923] gi|13093822|emb|CAC32120.1| conserved membrane protein [Mycobacterium leprae] gi|219933976|emb|CAR72688.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=289 Score = 398 bits (1022), Expect = 6e-109, Method: Compositional matrix adjust. Identities = 219/288 (77%), Positives = 249/288 (87%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAVLRAR+PR AA+L+RYGG AR ++ G + F I++ I AL RYR+ETLRL+ Sbjct 2 STAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNALSRYRKETLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAVVGGT AI+GFVTLSG SL+AIQGFASLG IGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 AP+++G+ +AATVGAGATA+LGAMRISEEIDALEVM IKSISFLV+TRIL GLVVI+PLY Sbjct 122 APVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 A+A+ MAF S ++TTV YGQSNGTYEHYFRTFLRP+DV WS +E VII VVMITHCYY Sbjct 182 AVAMIMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GYTA+GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNF LTV Sbjct 242 GYTANGGPVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV 289 >gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 [Mycobacterium gilvum PYR-GCK] gi|315441805|ref|YP_004074684.1| ABC transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213793|gb|ABP43197.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260108|gb|ADT96849.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length=290 Score = 397 bits (1021), Expect = 7e-109, Method: Compositional matrix adjust. Identities = 211/289 (74%), Positives = 243/289 (85%), Gaps = 0/289 (0%) Query 7 ASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRL 66 + AAVLR+R+PR A ++ G R L+ G A F +V IG A+R YR+E LRL Sbjct 2 SDTAAVLRSRFPRGVARAEKIVGAPGRGLDSIGHVAWFVVTAVGSIGHAVRYYRKEMLRL 61 Query 67 VAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRV 126 +AEIGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+ Sbjct 62 IAEIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 121 Query 127 AAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPL 186 AAP+V+G ALAATVGAGATA+LGAMRISEEIDALEVMGIKSIS+LVSTRI+ G VVI+PL Sbjct 122 AAPVVAGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIVAGFVVIIPL 181 Query 187 YALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCY 246 YA+A+ M+F S Q TT+FYGQS GTYEHYFRTFLRP+DV WS V+ VII+V+VM+ HCY Sbjct 182 YAMAIIMSFLSAQATTTIFYGQSTGTYEHYFRTFLRPDDVFWSFVQAVIISVIVMLNHCY 241 Query 247 YGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 YG+ ASGGPVGVG+AVGRSMR SLV++V VVL A LALYGVDPNFNLTV Sbjct 242 YGFYASGGPVGVGEAVGRSMRASLVAIVCVVLFASLALYGVDPNFNLTV 290 >gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1B [Mycobacterium marinum M] gi|183173768|gb|ACC38878.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium marinum M] Length=289 Score = 393 bits (1010), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 217/288 (76%), Positives = 246/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAVLRAR+PR A+ +RY G R L+ +G A F S+ Q G ALR YR+E LRL+ Sbjct 2 STAAVLRARFPRAIANFNRYAGSVTRGLDESGRLAWFILTSLGQSGHALRYYRKEILRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAVVGGT AI+GFVTLSG SLIAIQGFASLGNIGVEAFTGFF+AL N R+A Sbjct 62 AQIGMGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSIS+L STRI+ GLVVI+PLY Sbjct 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLASTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+VTTV YGQS+GTYEHYFRTFLRP+DV WS +E +IIA +VM+THCYY Sbjct 182 ALAMIMSFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGV+PNF LTV Sbjct 242 GYNAGGGPVGVGEAVGRSMRFSLVSVNVVVLCAALALYGVNPNFALTV 289 >gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_02657 [Mycobacterium kansasii ATCC 12478] Length=272 Score = 392 bits (1007), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 204/272 (75%), Positives = 235/272 (87%), Gaps = 0/272 (0%) Query 24 LDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGMGTGAMAVVGGT 83 ++RYGG R L+ TG A FT +S+ + +AL RYR+ETLRL+A+IGMGTGAMAVVGGT Sbjct 1 MNRYGGAAVRGLDTTGRLAWFTLVSLGNVPFALSRYRKETLRLIAQIGMGTGAMAVVGGT 60 Query 84 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 143 AI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+AAP+V+GVA+AATVGAG Sbjct 61 AAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGVAMAATVGAG 120 Query 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALDMAFTSGQVVTT 203 ATA+LGAMRISEEIDALEVMGIKS+ FL +TRIL GL VI+PLYA+A+ MAF S Q+ TT Sbjct 121 ATAELGAMRISEEIDALEVMGIKSVCFLATTRILAGLTVIIPLYAMAMIMAFLSPQITTT 180 Query 204 VFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVG 263 V YGQS GTYEHYFRTFLRP+DV WS +E +II VVM++HCYYGY+A GGPVGVG+AVG Sbjct 181 VLYGQSTGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMVSHCYYGYSAGGGPVGVGEAVG 240 Query 264 RSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 RSMRFSLVS+ VVVL A LALYGVDPNF LTV Sbjct 241 RSMRFSLVSIPVVVLSAALALYGVDPNFALTV 272 >gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897325|gb|EFG76929.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=289 Score = 391 bits (1004), Expect = 8e-107, Method: Compositional matrix adjust. Identities = 217/288 (76%), Positives = 248/288 (87%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAVLRAR+PR A +L+RYGG R L+ G A F +++ I ALR YR+ETLRL+ Sbjct 2 STAAVLRARFPRAAENLNRYGGAAGRGLDDVGQMAWFGAVALGHIPHALRNYRKETLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAV+GGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 AP+V+G+A+AATVGAGATA+LGAMRISEEIDALEVMGIKSISFL +TRI+ GLVVI+PLY Sbjct 122 APVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+ TTV YGQSNGTYEHYFRTFLRP+DV WS +E +II VVMITHC+Y Sbjct 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGV+PNF LTV Sbjct 242 GYNAGGGPVGVGEAVGRSMRFSLVSVQVVVLAAALALYGVNPNFALTV 289 >gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [Mycobacterium vanbaalenii PYR-1] gi|119953979|gb|ABM10984.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=289 Score = 390 bits (1002), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 218/288 (76%), Positives = 249/288 (87%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S +AVLR+R+PR A+ +++ G AR LE G A F +V IG ALR YRRE LRL+ Sbjct 2 STSAVLRSRFPRGVATAEKWAGAPARGLEAMGHVAVFVVTAVGSIGHALRFYRREMLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 AEIGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AEIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 AP+V+G ALAATVGAGATA+LGAMRISEEIDALEVMGIKSIS+LVSTRI+ G VVI+PLY Sbjct 122 APVVAGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 A+A+ M+F S QV TTVFYGQS GTYEHYFRTFLRP+DV WS ++ VII+V+VM+ HCYY Sbjct 182 AMAIIMSFLSAQVTTTVFYGQSVGTYEHYFRTFLRPDDVFWSFIQAVIISVIVMLNHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 G+ ASGGPVGVG+AVGRSMR SLV++VVVVLLA LALYGVDPNFNLTV Sbjct 242 GFYASGGPVGVGEAVGRSMRASLVAIVVVVLLASLALYGVDPNFNLTV 289 >gi|342859378|ref|ZP_08716032.1| hypothetical protein MCOL_10878 [Mycobacterium colombiense CECT 3035] gi|342133619|gb|EGT86822.1| hypothetical protein MCOL_10878 [Mycobacterium colombiense CECT 3035] Length=289 Score = 390 bits (1001), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 212/288 (74%), Positives = 246/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S +AV RAR+PR A +L+RYG +R L+ G A F ++V I ALR YR+ETLRL+ Sbjct 2 STSAVFRARFPRAAENLNRYGLAASRGLDDIGQMAWFGALAVGHIPHALRNYRKETLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAV+GGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 AP+V+G+A+AATVGAGATA+LGAMRISEE+DALEVMGIKSISFL STRI+ GLVVI+P+Y Sbjct 122 APVVTGIAMAATVGAGATAELGAMRISEEVDALEVMGIKSISFLASTRIMAGLVVIIPIY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ++A+ M F S Q+ TTV YGQSNGTYEHYFRTFLRP+DV WS +E +II VVMITHC+Y Sbjct 182 SMAIIMTFLSPQITTTVIYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGV+PNF LTV Sbjct 242 GYEAGGGPVGVGEAVGRSMRFSLVSVQVVVLSAALALYGVNPNFALTV 289 >gi|333988761|ref|YP_004521375.1| hypothetical protein JDM601_0121 [Mycobacterium sp. JDM601] gi|333484729|gb|AEF34121.1| integral membrane protein YrbE1B [Mycobacterium sp. JDM601] Length=284 Score = 389 bits (999), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 202/284 (72%), Positives = 239/284 (85%), Gaps = 0/284 (0%) Query 12 VLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIG 71 ++RAR+P A+ RY G R L+++G F ++ QI WALRRYRRE+LRL+AE+G Sbjct 1 MVRARFPGLIANYHRYVGAAGRSLDKSGQMGWFFLTAIRQIPWALRRYRRESLRLIAELG 60 Query 72 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131 MGTGAMAV+GGTVAIIGFV L+GGSLIAIQGF SLGNIGVE +TGF AAL N RV P+ Sbjct 61 MGTGAMAVIGGTVAIIGFVMLAGGSLIAIQGFTSLGNIGVETYTGFAAALVNVRVVGPVN 120 Query 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191 +G+ALAATVGAGATA+LGAMRISEEIDALEVMGI SIS+LVSTR++ G VI+PLYALAL Sbjct 121 AGIALAATVGAGATAELGAMRISEEIDALEVMGINSISYLVSTRVVAGFTVIIPLYALAL 180 Query 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251 MAF S Q+VTT+F+GQS+GTY+HYFRTFLR +DV WS +E ++IAV+VMITHCYYG+ A Sbjct 181 IMAFASPQIVTTLFFGQSSGTYDHYFRTFLRADDVFWSFMETILIAVIVMITHCYYGFNA 240 Query 252 SGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 SGGPVGVG+AVGRSMR SL+SV VVL A LALYGVDPNFNLT+ Sbjct 241 SGGPVGVGEAVGRSMRLSLISVPTVVLFAALALYGVDPNFNLTM 284 >gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] gi|118568904|gb|ABL03655.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] Length=289 Score = 389 bits (998), Expect = 4e-106, Method: Compositional matrix adjust. Identities = 215/288 (75%), Positives = 245/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAVLRAR+PR A+ +RY G R L+ +G A F S+ Q G ALR YR+E LRL+ Sbjct 2 STAAVLRARFPRAIANFNRYAGSVTRGLDESGRLAWFILTSLGQSGHALRYYRKEILRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAVVGGT AI+GFVTLSG SLIAIQGFASLGNIGVEAFTGFF+AL N R+A Sbjct 62 AQIGMGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGI+SIS+L STRI+ GLVVI+PLY Sbjct 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIQSISYLASTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+VTTV YGQS+GTYEHYFRTFLRP+DV WS +E +IIA +VM+THCYY Sbjct 182 ALAMIMSFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVG G+AVGRSMRFSLVSV VVVL A LALYGV+PNF LTV Sbjct 242 GYNAGGGPVGEGEAVGRSMRFSLVSVNVVVLCAALALYGVNPNFALTV 289 >gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 [Mycobacterium sp. JLS] gi|126232520|gb|ABN95920.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=297 Score = 385 bits (990), Expect = 3e-105, Method: Compositional matrix adjust. Identities = 211/293 (73%), Positives = 244/293 (84%), Gaps = 0/293 (0%) Query 3 ESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRE 62 S A VLR R+PR A ++ +R L+ G A F +V IG ALR YR+E Sbjct 5 SESNAKTGTVLRQRFPRGYARAEKLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKE 64 Query 63 TLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALA 122 LRL+AEIGMGTGAMAV+GGTVAI+GFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAAL Sbjct 65 VLRLIAEIGMGTGAMAVIGGTVAIVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALV 124 Query 123 NTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVV 182 N R+AAP+VSG ALAATVGAGATA+LGAMRISEEIDALEVMGIKSIS+LVSTRI+ G +V Sbjct 125 NVRIAAPVVSGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIV 184 Query 183 IMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMI 242 I+PLYA+A+ M+F S QV TT+FYGQS GTYEHYFRTFLRP+DV WS V+ +II+++VM+ Sbjct 185 IIPLYAMAIIMSFLSAQVTTTLFYGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVML 244 Query 243 THCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 HCYYGY ASGGPVGVG+AVGRSMR SL+++V+VVLLA LALYG DPNFNLTV Sbjct 245 NHCYYGYYASGGPVGVGEAVGRSMRASLIAIVLVVLLASLALYGTDPNFNLTV 297 >gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Mycobacterium avium 104] gi|254776558|ref|ZP_05218074.1| hypothetical protein MaviaA2_18084 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165125|gb|ABK66022.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336459861|gb|EGO38773.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium avium subsp. paratuberculosis S397] Length=289 Score = 385 bits (990), Expect = 3e-105, Method: Compositional matrix adjust. Identities = 214/288 (75%), Positives = 246/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAV R+R+PR A +L+RYG AR L+ G A F +++ I AL YR+ETLRL+ Sbjct 2 STAAVFRSRFPRAAENLNRYGLAAARGLDDVGQMAWFGGVALAHIPHALSHYRKETLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAV+GGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 AP+V+G+A+AATVGAGATA+LGAMRISEEIDALEVMGIKSISFL +TRI+ GLVVI+PLY Sbjct 122 APVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+ TTV YGQSNGTYEHYFRTFLRP+DV WS +E +II VVMITHC+Y Sbjct 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGV+PNF LTV Sbjct 242 GYNAGGGPVGVGEAVGRSMRFSLVSVQVVVLAAALALYGVNPNFALTV 289 >gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569 [Mycobacterium intracellulare ATCC 13950] Length=289 Score = 383 bits (984), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 213/288 (74%), Positives = 245/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S V R+R+PR A +L+RYG AR L+ G A F +++ I ALR YR+ETLRLV Sbjct 2 STTTVFRSRFPRAAENLNRYGLAAARGLDDIGQMAWFGGVALAHIPHALRNYRKETLRLV 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAV+GGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 AP+V+G+A+AATVGAGATA+LGAMRISEEIDALEVMGIKSISFL +TRI+ GLVVI+PLY Sbjct 122 APVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+ TTV YGQSNGTYEHYFRTFLRP+DV WS +E ++I VVMITHC+Y Sbjct 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAILITAVVMITHCFY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGV+PNF LTV Sbjct 242 GYNAGGGPVGVGEAVGRSMRFSLVSVQVVVLAAALALYGVNPNFALTV 289 >gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] gi|339630249|ref|YP_004721891.1| hypothetical protein MAF_01690 [Mycobacterium africanum GM041182] gi|289537179|gb|EFD41757.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] gi|339329605|emb|CCC25241.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium africanum GM041182] Length=289 Score = 374 bits (961), Expect = 8e-102, Method: Compositional matrix adjust. Identities = 221/288 (77%), Positives = 247/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRPEDV WS +E +II +VM++HCYY Sbjct 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEALIITAIVMVSHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB] Length=300 Score = 373 bits (957), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 220/288 (77%), Positives = 247/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [Mycobacterium tuberculosis H37Rv] gi|31791346|ref|NP_853839.1| integral membrane protein YRBE1B [Mycobacterium bovis AF2122/97] gi|121636080|ref|YP_976303.1| integral membrane protein YrbE1b [Mycobacterium bovis BCG str. Pasteur 1173P2] 63 more sequence titles Length=289 Score = 373 bits (957), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 220/288 (77%), Positives = 247/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 2 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis H37Ra] gi|254549107|ref|ZP_05139554.1| hypothetical protein Mtube_01356 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294994642|ref|ZP_06800333.1| hypothetical protein Mtub2_09022 [Mycobacterium tuberculosis 210] gi|297632646|ref|ZP_06950426.1| hypothetical protein MtubK4_00906 [Mycobacterium tuberculosis KZN 4207] gi|297729621|ref|ZP_06958739.1| hypothetical protein MtubKR_00936 [Mycobacterium tuberculosis KZN R506] gi|313656947|ref|ZP_07813827.1| hypothetical protein MtubKV_00921 [Mycobacterium tuberculosis KZN V2475] gi|339293233|gb|AEJ45344.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis CCDC5079] gi|339296879|gb|AEJ48989.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis CCDC5180] Length=298 Score = 372 bits (956), Expect = 3e-101, Method: Compositional matrix adjust. Identities = 220/288 (77%), Positives = 247/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 11 STAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 70 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 71 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 130 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 131 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 190 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 191 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 250 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 251 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 298 >gi|340625205|ref|YP_004743657.1| hypothetical protein MCAN_01741 [Mycobacterium canettii CIPT 140010059] gi|340003395|emb|CCC42515.1| conserved hypothetical integral membrane protein YRBE1B [Mycobacterium canettii CIPT 140010059] Length=289 Score = 370 bits (951), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 219/288 (77%), Positives = 246/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AVLRAR+PR A+L +YGG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 2 STTAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQITHALRYYRKETLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [Mycobacterium sp. MCS] gi|119866182|ref|YP_936134.1| hypothetical protein Mkms_0126 [Mycobacterium sp. KMS] gi|108767516|gb|ABG06238.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692271|gb|ABL89344.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length=296 Score = 370 bits (951), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 212/292 (73%), Positives = 244/292 (84%), Gaps = 0/292 (0%) Query 4 SSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRET 63 S S VLR R+PR A ++ +R L+ G A F +V IG ALR YR+E Sbjct 5 QSHTSTGTVLRQRFPRGYARAEKLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEV 64 Query 64 LRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALAN 123 LRL+AEIGMGTGAMAV+GGTVAI+GFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAAL N Sbjct 65 LRLIAEIGMGTGAMAVIGGTVAIVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVN 124 Query 124 TRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVI 183 R+AAP+VSG ALAATVGAGATA+LGAMRISEEIDALEVMGIKSIS+LVSTRI+ G +VI Sbjct 125 VRIAAPVVSGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVI 184 Query 184 MPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMIT 243 +PLYA+A+ M+F S QV TT+FYGQS GTYEHYFRTFLRP+DV WS V+ +II+++VMI Sbjct 185 IPLYAMAIIMSFLSAQVTTTLFYGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMIN 244 Query 244 HCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 HCYYGY ASGGPVGVG+AVGRSMR SL+++V+VVLLA LALYG DPNFNLTV Sbjct 245 HCYYGYYASGGPVGVGEAVGRSMRASLIAIVLVVLLASLALYGTDPNFNLTV 296 >gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] gi|298497354|gb|EFI32648.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] Length=289 Score = 370 bits (950), Expect = 2e-100, Method: Compositional matrix adjust. Identities = 219/288 (77%), Positives = 246/288 (86%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AAVLRAR+PR A+L +YG AR L+ G F S+ QI ALR YR+ETLRL+ Sbjct 2 STAAVLRARFPRAVANLRQYGVAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLI 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A+IGMGTGAMAVVGGTVAI+GFVTLSG SL+AIQGFASLGNIGVEAFTGFFAAL N R+A Sbjct 62 AQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIA 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 P+V+GVALAATVGAGATA+LGAMRISEEIDALEVMGIKSISFL STRI+ GLVVI+PLY Sbjct 122 GPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 ALA+ M+F S Q+ TTV YGQSNGTYEHYF+TFLRP+DV WS +E +II +VM++HCYY Sbjct 182 ALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYGVDPNFNLTV Sbjct 242 GYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV 289 >gi|118471402|ref|YP_884549.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118172689|gb|ABK73585.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length=289 Score = 367 bits (941), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 203/288 (71%), Positives = 239/288 (83%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S VLR+R+PR + AR L+ G A F ++V + A R YRRE+LRLV Sbjct 2 STVQVLRSRFPRAFSRSSEIAATPARFLDSMGHVAWFVVQAIVHVPHAFRHYRRESLRLV 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 AEIGMGTGAMAV+GGTVAIIGFVTLS GSLIAIQGFASLGNIGVEAFTGFFAALAN RV Sbjct 62 AEIGMGTGAMAVIGGTVAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANIRVV 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 AP+V+G ALAATVGAGATA+LGAMRISEE+DALEVMGIKSIS+LVSTRI+ G +VI+PLY Sbjct 122 APVVTGQALAATVGAGATAELGAMRISEEVDALEVMGIKSISYLVSTRIMAGAIVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 A+A+ ++F S Q+VTT+FY QS GTYEHYF TFLR +DV WS +EV+I++V+VM+ HCY+ Sbjct 182 AMAILLSFMSAQLVTTIFYSQSVGTYEHYFHTFLRVDDVMWSFLEVIIMSVIVMLNHCYF 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GY ASGG VGVG+AVGRSMR SL+++V+VVLLA LALYG DPNFNLTV Sbjct 242 GYFASGGAVGVGEAVGRSMRTSLIAIVLVVLLASLALYGTDPNFNLTV 289 >gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899577|gb|EFG79030.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=289 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 193/288 (68%), Positives = 232/288 (81%), Gaps = 0/288 (0%) Query 8 SAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLV 67 S AA LR R+PRT+A + RYG +R L G F ++ QI +A+ RYR+E LR+V Sbjct 2 STAAALRVRFPRTSALVIRYGDVPSRPLVEIGQMVWFALSAIGQIPFAVHRYRKELLRMV 61 Query 68 AEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVA 127 A++GMGTGAMAVVGGT AI+GF+TLS GSL+AIQG+A+LGNIGVEAFTGF AAL N R Sbjct 62 AQMGMGTGAMAVVGGTAAIVGFITLSAGSLVAIQGYATLGNIGVEAFTGFLAALVNVRFV 121 Query 128 APIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLY 187 AP+ +G ALAATVGAGATA+LGAMRISEEIDALEVM I+S+ FL STR++ GL+VI+PLY Sbjct 122 APVAAGQALAATVGAGATAELGAMRISEEIDALEVMSIRSVPFLASTRVVAGLIVIIPLY 181 Query 188 ALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYY 247 LA+ MAF S QV T + YGQS GTY HYF TFLR DVGWS EV+++AVVVM THCYY Sbjct 182 GLAMTMAFLSQQVTTVLLYGQSIGTYNHYFHTFLRLNDVGWSFAEVILVAVVVMTTHCYY 241 Query 248 GYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GYTA+GGPVGVG+AVGRSMR SL+++VVVV+L +A+YG PNFNLTV Sbjct 242 GYTATGGPVGVGEAVGRSMRLSLITIVVVVVLTAMAVYGKTPNFNLTV 289 >gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398533|gb|AAS06153.1| hypothetical protein MAP_3603 [Mycobacterium avium subsp. paratuberculosis K-10] Length=251 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 195/249 (79%), Positives = 222/249 (90%), Gaps = 0/249 (0%) Query 47 ISVVQIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASL 106 +++ I AL YR+ETLRL+A+IGMGTGAMAV+GGTVAI+GFVTLSG SL+AIQGFASL Sbjct 3 VALAHIPHALSHYRKETLRLIAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASL 62 Query 107 GNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIK 166 GNIGVEAFTGFFAAL N R+AAP+V+G+A+AATVGAGATA+LGAMRISEEIDALEVMGIK Sbjct 63 GNIGVEAFTGFFAALINVRIAAPVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIK 122 Query 167 SISFLVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDV 226 SISFL +TRI+ GLVVI+PLYALA+ M+F S Q+ TTV YGQSNGTYEHYFRTFLRP+DV Sbjct 123 SISFLATTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDV 182 Query 227 GWSVVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYG 286 WS +E +II VVMITHC+YGY A GGPVGVG+AVGRSMRFSLVSV VVVL A LALYG Sbjct 183 FWSFLEAIIITAVVMITHCFYGYNAGGGPVGVGEAVGRSMRFSLVSVQVVVLAAALALYG 242 Query 287 VDPNFNLTV 295 V+PNF LTV Sbjct 243 VNPNFALTV 251 >gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900708|gb|EFG80078.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=283 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 192/283 (68%), Positives = 231/283 (82%), Gaps = 0/283 (0%) Query 13 LRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGM 72 +++R+PR + G R L+ +G A F + +G+ L+ YR+E LRL+AEIGM Sbjct 1 MQSRFPRAWKLGAGWVGAPGRALDASGDVALFVGEVLRYLGFTLKNYRKEVLRLIAEIGM 60 Query 73 GTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVS 132 GTGAMA VGGTVAIIGFVTLS GSLIAIQGFASLGNIGVEAFTGFFAALAN RV APIV+ Sbjct 61 GTGAMAAVGGTVAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANVRVVAPIVT 120 Query 133 GVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALD 192 G ALAATVGAGATAQLGAMRISEEIDALEVMGIKS+S+LVSTR++G +V +PLY++A+ Sbjct 121 GTALAATVGAGATAQLGAMRISEEIDALEVMGIKSVSYLVSTRVIGAFIVTIPLYSVAVL 180 Query 193 MAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTAS 252 ++F S Q+VTT+FY QS GTY+HYF TFLR D +S+ E V I+ VVM+ HCYYGY AS Sbjct 181 LSFFSAQLVTTLFYAQSIGTYDHYFNTFLRVNDFWYSLAETVAISAVVMLNHCYYGYNAS 240 Query 253 GGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV 295 GGPVGVG AVGRSMR SL+++V+VVL+A LA+YGV+PNFNLTV Sbjct 241 GGPVGVGVAVGRSMRASLIAIVMVVLMASLAIYGVNPNFNLTV 283 >gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length=290 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 163/294 (56%), Positives = 221/294 (76%), Gaps = 5/294 (1%) Query 1 MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR 60 M+E + + + A + ++ RT A + R T+R ++ G A F ++ I WA+R++ Sbjct 1 MIEVTLSDSLAQI-GKFGRTRARVAR----TSRSIDDVGRQAVFFARAIAHIPWAIRKHP 55 Query 61 RETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAA 120 +E LRLVAEI MGTGA+AV+GGTVA++GF+TL+ G IAIQGF+SLGNIGVEA TGFF+A Sbjct 56 KEVLRLVAEISMGTGALAVIGGTVAVVGFLTLASGGTIAIQGFSSLGNIGVEALTGFFSA 115 Query 121 LANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGL 180 N R+AAP+++G+ L+AT+GAG+TAQ+GAMRISEEIDALE M I S+ ++VSTR+ G+ Sbjct 116 FINVRIAAPVIAGIGLSATIGAGSTAQIGAMRISEEIDALESMAISSVPYVVSTRVTAGM 175 Query 181 VVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVV 240 + I+PLY+LAL +F +G+ T V +GQS+G Y+HYF TFL P DV WS V+V+++A++V Sbjct 176 IAILPLYSLALVGSFLAGRFTTVVLFGQSSGLYDHYFTTFLDPVDVAWSFVQVLVMALLV 235 Query 241 MITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 M+ H YYGY ASGGP GVG AVGR +R SL+ VV V LL LALYG NFNL+ Sbjct 236 MLIHTYYGYNASGGPSGVGTAVGRGVRLSLICVVAVTLLVSLALYGGSGNFNLS 289 >gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4] gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4] Length=286 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 167/279 (60%), Positives = 221/279 (80%), Gaps = 4/279 (1%) Query 15 ARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGMGT 74 +R+P+ A + G R L+ G A F ++ A+ Y++ET+RL+AEIGMG+ Sbjct 10 SRHPKLADA----AGVPVRILKAIGHQADFFGKTIRLAPHAISSYKKETVRLIAEIGMGS 65 Query 75 GAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGV 134 GAMA++GGTV I+GF+TLSGG+L+AIQGF+SLGNIGVEA TGFFAA N R+ AP++SG+ Sbjct 66 GAMAIIGGTVVIVGFMTLSGGTLLAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGI 125 Query 135 ALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALDMA 194 ALAAT+GAGATAQLGAMRISEEIDALEVMGI+S+S+LVSTR++ G++ I+PLY++A+ M+ Sbjct 126 ALAATIGAGATAQLGAMRISEEIDALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMS 185 Query 195 FTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTASGG 254 F + Q TT YGQS+G Y+HYF TFLRP D+ WS ++ V++A+VVM+ HCYYGY A GG Sbjct 186 FVASQFTTTYVYGQSSGVYDHYFTTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGG 245 Query 255 PVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNL 293 P GVG+AVGR++R SL++VV V L+A LA+YG NFNL Sbjct 246 PAGVGEAVGRAVRTSLIAVVSVTLIASLAIYGASGNFNL 284 >gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346 [Mycobacterium intracellulare ATCC 13950] Length=286 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 151/278 (55%), Positives = 209/278 (76%), Gaps = 4/278 (1%) Query 17 YPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGMGTGA 76 +PR + +LD + G R G ARF ++ I AL Y+ ETLR++AE+G+G GA Sbjct 11 FPRLSYTLDGWVAG----WRRIGAQARFYARTLGAIRDALSSYKHETLRMIAEMGLGAGA 66 Query 77 MAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVAL 136 +AV+GGTV I+GF+TLSGGSL+ IQG++SL IGVEA TGF +A N R+ P+ + + L Sbjct 67 LAVIGGTVGIVGFLTLSGGSLVTIQGYSSLSGIGVEALTGFVSAYVNGRIVTPLTAVIGL 126 Query 137 AATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALDMAFT 196 +AT+GAG TAQLGAMRI+EEIDALEVMGI+SI++LVSTR++ G+VV++PLY + L M+F Sbjct 127 SATIGAGTTAQLGAMRINEEIDALEVMGIRSIAYLVSTRVIAGVVVVIPLYCIGLWMSFY 186 Query 197 SGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTASGGPV 256 + + TT YGQ G Y+HYF TFL+P D+ WS+++ V++ +VVM+ H YYGYTASGGP Sbjct 187 AARFATTSVYGQPTGVYDHYFSTFLQPTDIIWSLLQAVLMGLVVMLVHTYYGYTASGGPA 246 Query 257 GVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 GVG+AVGR++R S+VS V+V+L + LA+YG NF+ + Sbjct 247 GVGEAVGRAVRSSMVSAVLVILFSSLAIYGKTGNFHFS 284 >gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 [Mycobacterium sp. JLS] gi|126236561|gb|ABN99961.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=285 Score = 298 bits (762), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 145/279 (52%), Positives = 207/279 (75%), Gaps = 4/279 (1%) Query 16 RYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGMGTG 75 R+P LD + G R G ARF ++ + AL YR ETLR++A++G+G G Sbjct 9 RFPGLTHRLDGWVAG----WRRIGAQARFYAKTLGAMWEALVYYRGETLRMIAQMGLGAG 64 Query 76 AMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVA 135 A+A++GGTV I+GF+TL+ GSL+ IQG++SL +IGVEA TGF +A N R+ P+ + ++ Sbjct 65 ALAMIGGTVGIVGFLTLTAGSLVTIQGYSSLSDIGVEALTGFVSAYVNGRIVTPLTAVIS 124 Query 136 LAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALDMAF 195 L+AT+GAG TAQLGAMRI+EEIDALEVMGI+S+++L STR++ G++V++PLY +A+ M+F Sbjct 125 LSATIGAGTTAQLGAMRINEEIDALEVMGIRSVAYLASTRVIAGVIVVIPLYCIAVWMSF 184 Query 196 TSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTASGGP 255 S + TTV+YGQ+ G Y+HYF TFL+P D+ WS+ + V++ VVM+ H YYG+TASGGP Sbjct 185 MSARFATTVYYGQATGIYDHYFSTFLQPSDILWSLFQAVLMGFVVMLVHTYYGFTASGGP 244 Query 256 VGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 GVG+AVGR++R SL++ V V+L A LA+YG NF + Sbjct 245 AGVGEAVGRAVRTSLIAAVFVILFASLAIYGQSGNFQFS 283 >gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [Mycobacterium vanbaalenii PYR-1] gi|119956652|gb|ABM13657.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length=282 Score = 291 bits (745), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 141/284 (50%), Positives = 204/284 (72%), Gaps = 4/284 (1%) Query 11 AVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEI 70 A +RA +PR A + R G R + T + R ++ + A YR+E +RLVAEI Sbjct 2 AAVRALHPRLAQQIGRPVGALGRIGDHTSFYGR----ALAGVPHAAMHYRKEIIRLVAEI 57 Query 71 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130 MG G +A++GGT+ I+GF+TL+ G +A+QG++SLG+IG+EA TGF AA N R++AP+ Sbjct 58 SMGAGTLAMIGGTIVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPV 117 Query 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190 V+G+ LAAT GAG TAQLGAMRI+EEIDALE MGI+ + +LVSTRI+ G++ I PLY++A Sbjct 118 VAGIGLAATFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIA 177 Query 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250 + ++F + ++ T V +GQS G Y HYF TFL P D+ WS ++ +++A+ V++ H Y+GY Sbjct 178 VMLSFAASKLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYF 237 Query 251 ASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 A+GGP GVG AVG ++R SL+ V+ V LL L++YG + NFNL+ Sbjct 238 ATGGPSGVGVAVGNAVRTSLIVVISVTLLVSLSVYGANGNFNLS 281 >gi|333918570|ref|YP_004492151.1| putative YrbE family protein [Amycolicicoccus subflavus DQS3-9A1] gi|333480791|gb|AEF39351.1| Putative YrbE family protein [Amycolicicoccus subflavus DQS3-9A1] Length=290 Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 159/291 (55%), Positives = 215/291 (74%), Gaps = 4/291 (1%) Query 4 SSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRET 63 +S + AAV AR+P+TA R G ++ G A F ++V A+ RRET Sbjct 3 ASRETEAAVFAARFPKTARRGKRVSGA----IDTIGDHAIFYFKALVYGPRAVMHARRET 58 Query 64 LRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALAN 123 +RL+AE+GMGTGA+A++GGTV I+GF+T+ G IA+QGF+SLGNIG+EA TGFF+A N Sbjct 59 VRLIAEVGMGTGALAIIGGTVVIMGFLTMFAGGTIAVQGFSSLGNIGIEALTGFFSAFIN 118 Query 124 TRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVI 183 R+A P+++GV LAAT+GAG TA+LGAMR+SEEIDALE M + S+ +LVSTR++ G++VI Sbjct 119 VRIAGPVIAGVGLAATIGAGCTAELGAMRVSEEIDALETMAVPSLPYLVSTRVIAGMIVI 178 Query 184 MPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMIT 243 +PLY+LA+ +F G+ VT YGQS G Y+HYF TFLRP D+ WS +V+++A+VVM+ Sbjct 179 LPLYSLAIMASFFGGRFVTVHIYGQSPGLYDHYFTTFLRPVDLIWSFGQVLVMAIVVMLI 238 Query 244 HCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 H YYGY ASGGPVGVG AVG++ R SLV+VV V L+ LA+YG P+ +LT Sbjct 239 HSYYGYYASGGPVGVGVAVGKATRASLVAVVTVTLIISLAVYGSSPSLDLT 289 >gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcus opacus B4] gi|226242695|dbj|BAH53043.1| putative YrbE family protein [Rhodococcus opacus B4] Length=283 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 157/279 (57%), Positives = 206/279 (74%), Gaps = 4/279 (1%) Query 16 RYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGMGTG 75 R+PRT R +R ++R G A F ++ AL YRRETLRL+AEI MGTG Sbjct 8 RFPRT----RRRFASASRSIDRLGEQALFFARAIGSAPRALVHYRRETLRLIAEISMGTG 63 Query 76 AMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVA 135 A+AV+GGTV I+GF+TL G IA+QG++SLGNIGVEA TGFFAA N R+AAP+++G+ Sbjct 64 ALAVIGGTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIG 123 Query 136 LAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALDMAF 195 LAAT+GAG+TAQLGAMR+SEEIDALE M I SI +LVSTR++ G++ I+PLYALA+ +F Sbjct 124 LAATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASF 183 Query 196 TSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTASGGP 255 + + T V Y QS+G Y+HYF TFL P D+ WS + +++A+ +M+ H YYG+ ASGGP Sbjct 184 MASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNASGGP 243 Query 256 VGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 VGVG AVG ++R SL++VV V LL LA+YG NFNL+ Sbjct 244 VGVGVAVGNAVRSSLIAVVTVTLLISLAIYGGSGNFNLS 282 >gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 [Rhodococcus jostii RHA1] gi|110821199|gb|ABG96483.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=283 Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 158/284 (56%), Positives = 206/284 (73%), Gaps = 17/284 (5%) Query 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 70 R R+ + S+DR G E+ FAR IGWA R Y +ETLRL+AEI Sbjct 13 RKRFASASRSIDRLG-------EQALFFAR-------AIGWAPRALMHYPKETLRLIAEI 58 Query 71 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130 MGTGA+AV+GGTV I+GF+TL G IA+QG++SLGNIGVEA TGFFAA N R+AAP+ Sbjct 59 SMGTGALAVIGGTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPV 118 Query 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190 ++G+ LAAT+GAG+TAQLGAMR+SEEIDALE M I SI +LVSTR++ G++ I+PLYALA Sbjct 119 IAGIGLAATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALA 178 Query 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250 + +F + + T V Y QS+G Y+HYF TFL P D+ WS + +++A+ +M+ H YYG+ Sbjct 179 VIASFMASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFN 238 Query 251 ASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 ASGGPVGVG AVG ++R SL++VV V LL LA+YG NFNL+ Sbjct 239 ASGGPVGVGVAVGNAVRSSLIAVVTVTLLISLAIYGASGNFNLS 282 >gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS] gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length=285 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 145/283 (52%), Positives = 200/283 (71%), Gaps = 4/283 (1%) Query 12 VLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIG 71 VLR+ YPR A + R L R G F ++ + A +R+E +RL+AEI Sbjct 6 VLRSNYPRLARGVRR----PVDVLGRLGDHMLFYIRAIGGVPHATVHFRKEIIRLIAEIS 61 Query 72 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131 MG G +A++GGT+ I+GF+TL+ G +A+QGF+SLG+IG+EA TGF AA N R+AAP V Sbjct 62 MGAGTLAMIGGTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTV 121 Query 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191 +G+ LAAT GAG TAQLGAMRI+EEIDALE M I+ + +LVSTRI G++ I PLYA+A+ Sbjct 122 AGIGLAATFGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAV 181 Query 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251 ++F + Q VT + +GQS G Y+HYF TFL P D+ WS ++ V++A+ +++ H Y+GY A Sbjct 182 ILSFLASQFVTVMLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFA 241 Query 252 SGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 SGGP GVG AVG ++R SL+ VV V LL L++YG + NFNL+ Sbjct 242 SGGPSGVGVAVGNAVRTSLILVVSVTLLVSLSVYGRNGNFNLS 284 >gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [Mycobacterium smegmatis str. MC2 155] gi|118174852|gb|ABK75748.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=281 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 142/283 (51%), Positives = 199/283 (71%), Gaps = 4/283 (1%) Query 12 VLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIG 71 V+R +PR L R R + T + R ++ A YRRE +RL+AEI Sbjct 2 VVRTLHPRLTRELRRPVDVAGRLGDHTSFYGR----ALAGTPHAAMHYRREVIRLIAEIS 57 Query 72 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131 MG G +A++GGTV I+GF+TL+ G +A+QG++SLGNIG+EA TGF AA N R++AP+V Sbjct 58 MGAGTLAMIGGTVVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVV 117 Query 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191 +G+ LAAT GAG TAQLGAMRI+EEIDALE MGI+ + +LVSTRI+ G+V I PLYA+A+ Sbjct 118 AGIGLAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVAV 177 Query 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251 ++F + + T V +GQS G Y HYF TFL P D+ WS ++ +++A+ +++ H Y+G+ A Sbjct 178 ILSFAASNLTTVVMFGQSAGLYNHYFSTFLNPVDLLWSFLQAILMAIAILLVHTYFGFFA 237 Query 252 SGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 +GGP GVG AVG ++R SL+ V+ V LL LA+YG + NFNL+ Sbjct 238 AGGPSGVGVAVGNAVRTSLIVVIAVTLLVSLAVYGSNGNFNLS 280 >gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS] gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS] gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length=285 Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 144/283 (51%), Positives = 199/283 (71%), Gaps = 4/283 (1%) Query 12 VLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIG 71 VLR+ YPR A + R L R G F ++ + A +R+E +RL+AEI Sbjct 6 VLRSNYPRLARGVRR----PVDVLGRLGDHMLFYIRAIGGVPHATLHFRKEIIRLIAEIS 61 Query 72 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131 MG G +A++GGT+ I+GF+TL+ G +A+QGF+SLG+IG+EA TGF AA N R+AAP V Sbjct 62 MGAGTLAMIGGTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTV 121 Query 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191 +G+ LAAT GAG TAQLGAMRI+EEIDALE M I+ + +LVSTRI G++ I PLYA+A+ Sbjct 122 AGIGLAATFGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAV 181 Query 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251 ++F + Q T + +GQS G Y+HYF TFL P D+ WS ++ V++A+ +++ H Y+GY A Sbjct 182 ILSFVASQFTTVMLFGQSAGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFA 241 Query 252 SGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 SGGP GVG AVG ++R SL+ VV V LL L++YG + NFNL+ Sbjct 242 SGGPSGVGVAVGNAVRTSLILVVSVTLLVSLSVYGRNGNFNLS 284 >gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium 104] gi|118167732|gb|ABK68629.1| TrnB2 protein [Mycobacterium avium 104] Length=281 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 148/282 (53%), Positives = 199/282 (71%), Gaps = 4/282 (1%) Query 13 LRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGM 72 LRA YPR L+R L G A F ++ + +A RY RE +RLVAEI M Sbjct 3 LRAAYPRLTRQLER----PVALLAGIGDHALFYGKALAGMPFAATRYTREVVRLVAEISM 58 Query 73 GTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVS 132 G G +A++GGTV I+GF+TL+ G +AIQG+ SLGNIG+EA TGF AA N R+AAP+V+ Sbjct 59 GAGTLAMIGGTVVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVA 118 Query 133 GVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALD 192 G+ LAAT GAG TAQLGAMRI+EE+DALE M I+ +++LVSTRIL G++ I PLY++A+ Sbjct 119 GIGLAATFGAGVTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVI 178 Query 193 MAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTAS 252 ++F + Q TT GQS G Y+HYF TFL P D+ WS ++ +++A+ +++ H YYGY AS Sbjct 179 LSFVASQFTTTFLLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFAS 238 Query 253 GGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 GGP GVG A G ++R SL+ VV V LL L++YG + NFNL+ Sbjct 239 GGPAGVGNATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLS 280 >gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291] Length=281 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 148/282 (53%), Positives = 199/282 (71%), Gaps = 4/282 (1%) Query 13 LRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGM 72 LRA YPR L+R L G A F ++ + +A RY RE +RLVAEI M Sbjct 3 LRAAYPRLTRQLER----PDALLAGIGDHALFYGKALAGMPFAATRYTREVVRLVAEISM 58 Query 73 GTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVS 132 G G +A++GGTV I+GF+TL+ G +AIQG+ SLGNIG+EA TGF AA N R+AAP+V+ Sbjct 59 GAGTLAMIGGTVVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVA 118 Query 133 GVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALD 192 G+ LAAT GAG TAQLGAMRI+EE+DALE M I+ +++LVSTRIL G++ I PLY++A+ Sbjct 119 GIGLAATFGAGVTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVI 178 Query 193 MAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTAS 252 ++F + Q TT GQS G Y+HYF TFL P D+ WS ++ +++A+ +++ H YYGY AS Sbjct 179 LSFVASQFTTTFLLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFAS 238 Query 253 GGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 GGP GVG A G ++R SL+ VV V LL L++YG + NFNL+ Sbjct 239 GGPAGVGNATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLS 280 >gi|342860431|ref|ZP_08717082.1| TrnB2 protein [Mycobacterium colombiense CECT 3035] gi|342132086|gb|EGT85327.1| TrnB2 protein [Mycobacterium colombiense CECT 3035] Length=281 Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 145/282 (52%), Positives = 199/282 (71%), Gaps = 4/282 (1%) Query 13 LRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEIGM 72 LRA YPR L+R R G + F ++ + +A YRRE +RL+AEI M Sbjct 3 LRAAYPRLTRQLER----PVAFFGRIGDHSLFYGKALAGVPFAATHYRREVIRLIAEISM 58 Query 73 GTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVS 132 G G +A++GGTV I+GF+TL+ G +AIQG+ SLGNIG+EA TGF +A N R+AAP+V+ Sbjct 59 GAGTLAMIGGTVVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLSAFINVRIAAPVVA 118 Query 133 GVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALD 192 G+ LAAT GAG TAQLGAMRI+EE+DALE M I+ +++LVSTRIL G++ I PLY++A+ Sbjct 119 GIGLAATFGAGVTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMMAITPLYSIAVI 178 Query 193 MAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTAS 252 ++F + Q TT GQS G Y+HYF TFL P D+ WS ++ +++A+ +++ H YYGY AS Sbjct 179 LSFVASQFTTTFLLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFAS 238 Query 253 GGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLT 294 GGP GVG A G ++R SL+ VV V LL L++YG + NFNL+ Sbjct 239 GGPAGVGNATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLS 280 Lambda K H 0.324 0.138 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 489554810128 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40