BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0590A

Length=84
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|31791772|ref|NP_854265.1|  MCE-family protein MCE2B [Mycobacte...   179    2e-43
gi|339630658|ref|YP_004722300.1|  MCE-family protein MCE2B [Mycob...   179    2e-43
gi|289573190|ref|ZP_06453417.1|  MCE-family protein mce2B [Mycoba...   179    2e-43
gi|289446143|ref|ZP_06435887.1|  MCE-family protein [Mycobacteriu...   178    2e-43
gi|339297275|gb|AEJ49385.1|  MCE-family protein [Mycobacterium tu...   178    3e-43
gi|15839993|ref|NP_335030.1|  hypothetical protein MT0620 [Mycoba...   171    3e-41
gi|41410183|ref|NP_963019.1|  hypothetical protein MAP4085 [Mycob...   147    7e-34
gi|254776982|ref|ZP_05218498.1|  hypothetical protein MaviaA2_202...   146    8e-34
gi|118465867|ref|YP_883681.1|  virulence factor Mce [Mycobacteriu...   146    1e-33
gi|342858886|ref|ZP_08715540.1|  hypothetical protein MCOL_08418 ...   145    3e-33
gi|108797099|ref|YP_637296.1|  virulence factor MCE-like protein ...   133    1e-29
gi|145221305|ref|YP_001131983.1|  virulence factor Mce family pro...   127    8e-28
gi|315441807|ref|YP_004074686.1|  virulence factor Mce family pro...   127    8e-28
gi|120401163|ref|YP_950992.1|  virulence factor Mce family protei...   125    2e-27
gi|240168190|ref|ZP_04746849.1|  MCE-family protein Mce1B [Mycoba...   122    1e-26
gi|183980444|ref|YP_001848735.1|  MCE-family protein Mce1B [Mycob...   122    2e-26
gi|118616796|ref|YP_905128.1|  MCE-family protein Mce1B [Mycobact...   122    2e-26
gi|15828394|ref|NP_302657.1|  hypothetical protein [Mycobacterium...   122    2e-26
gi|167969014|ref|ZP_02551291.1|  mce-family protein mce2B [Mycoba...   121    4e-26
gi|41409703|ref|NP_962539.1|  hypothetical protein MAP3605 [Mycob...   120    9e-26
gi|342859376|ref|ZP_08716030.1|  virulence factor Mce [Mycobacter...   120    1e-25
gi|118468987|ref|YP_884551.1|  virulence factor Mce family protei...   120    1e-25
gi|254823474|ref|ZP_05228475.1|  virulence factor Mce family prot...   119    1e-25
gi|296167383|ref|ZP_06849785.1|  virulence factor mce family prot...   117    4e-25
gi|31791348|ref|NP_853841.1|  MCE-family protein MCE1B [Mycobacte...   115    2e-24
gi|289748646|ref|ZP_06508024.1|  MCE-family protein mce1B [Mycoba...   115    2e-24
gi|289441545|ref|ZP_06431289.1|  MCE-family protein mce1B [Mycoba...   115    2e-24
gi|15607311|ref|NP_214684.1|  MCE-family protein MCE1B [Mycobacte...   115    2e-24
gi|289568069|ref|ZP_06448296.1|  MCE-family protein mce1B [Mycoba...   115    2e-24
gi|294994645|ref|ZP_06800336.1|  MCE-family protein mce1B [Mycoba...   114    4e-24
gi|340625207|ref|YP_004743659.1|  MCE-family protein MCE1B [Mycob...   114    5e-24
gi|296165086|ref|ZP_06847639.1|  virulence factor mce family prot...   112    2e-23
gi|296163929|ref|ZP_06846565.1|  virulence factor mce family prot...   110    7e-23
gi|333988763|ref|YP_004521377.1|  MCE-family protein Mce1B [Mycob...  95.1    3e-18
gi|120405351|ref|YP_955180.1|  virulence factor Mce family protei...  76.3    2e-12
gi|126436741|ref|YP_001072432.1|  virulence factor Mce family pro...  73.9    8e-12
gi|240170714|ref|ZP_04749373.1|  virulence factor Mce family prot...  73.2    1e-11
gi|126436759|ref|YP_001072450.1|  virulence factor Mce family pro...  72.8    1e-11
gi|183984023|ref|YP_001852314.1|  MCE-family protein Mce3B_1 [Myc...  72.8    2e-11
gi|118619128|ref|YP_907460.1|  MCE-family protein Mce3B_1 [Mycoba...  72.8    2e-11
gi|120404935|ref|YP_954764.1|  virulence factor Mce family protei...  71.2    5e-11
gi|254820122|ref|ZP_05225123.1|  virulence factor Mce family prot...  70.9    5e-11
gi|118469807|ref|YP_884760.1|  virulence factor Mce family protei...  70.9    6e-11
gi|315443154|ref|YP_004076033.1|  virulence factor Mce family pro...  70.9    6e-11
gi|120405555|ref|YP_955384.1|  virulence factor Mce family protei...  70.9    6e-11
gi|145222690|ref|YP_001133368.1|  virulence factor Mce family pro...  70.9    6e-11
gi|226306855|ref|YP_002766815.1|  Mce family protein [Rhodococcus...  70.5    8e-11
gi|120401389|ref|YP_951218.1|  virulence factor Mce family protei...  70.1    1e-10
gi|183982887|ref|YP_001851178.1|  MCE-family protein Mce3B [Mycob...  69.7    1e-10
gi|118618292|ref|YP_906624.1|  MCE-family protein Mce3B [Mycobact...  69.7    1e-10


>gi|31791772|ref|NP_854265.1| MCE-family protein MCE2B [Mycobacterium bovis AF2122/97]
 gi|121636508|ref|YP_976731.1| mce-family protein mce2B [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224988980|ref|YP_002643667.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
 16 more sequence titles
 Length=343

 Score =  179 bits (453),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct  260  LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  319

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct  320  GLQPGGPVRTVKLFGQPTGRCTPQ  343


>gi|339630658|ref|YP_004722300.1| MCE-family protein MCE2B [Mycobacterium africanum GM041182]
 gi|339330014|emb|CCC25669.1| MCE-family protein MCE2B [Mycobacterium africanum GM041182]
Length=343

 Score =  179 bits (453),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct  260  LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  319

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct  320  GLQPGGPVRTVKLFGQPTGRCTPQ  343


>gi|289573190|ref|ZP_06453417.1| MCE-family protein mce2B [Mycobacterium tuberculosis K85]
 gi|289537621|gb|EFD42199.1| MCE-family protein mce2B [Mycobacterium tuberculosis K85]
Length=343

 Score =  179 bits (453),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct  260  LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  319

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct  320  GLQPGGPVRTVKLFGQPTGRCTPQ  343


>gi|289446143|ref|ZP_06435887.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289749087|ref|ZP_06508465.1| MCE-family protein mce2b [Mycobacterium tuberculosis T92]
 gi|289756669|ref|ZP_06516047.1| MCE-family protein mce2B [Mycobacterium tuberculosis T85]
 gi|289419101|gb|EFD16302.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289689674|gb|EFD57103.1| MCE-family protein mce2b [Mycobacterium tuberculosis T92]
 gi|289712233|gb|EFD76245.1| MCE-family protein mce2B [Mycobacterium tuberculosis T85]
Length=355

 Score =  178 bits (452),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct  272  LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  331

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct  332  GLQPGGPVRTVKLFGQPTGRCTPQ  355


>gi|339297275|gb|AEJ49385.1| MCE-family protein [Mycobacterium tuberculosis CCDC5180]
Length=210

 Score =  178 bits (451),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct  127  LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  186

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct  187  GLQPGGPVRTVKLFGQPTGRCTPQ  210


>gi|15839993|ref|NP_335030.1| hypothetical protein MT0620 [Mycobacterium tuberculosis CDC1551]
 gi|57116757|ref|YP_177627.1| MCE family-like protein [Mycobacterium tuberculosis H37Rv]
 gi|148660360|ref|YP_001281883.1| MCE family-like protein [Mycobacterium tuberculosis H37Ra]
 22 more sequence titles
 Length=84

 Score =  171 bits (433),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 83/84 (99%), Positives = 84/84 (100%), Gaps = 0/84 (0%)

Query  1   LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
           +LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct  1   MLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60

Query  61  GLQPGGPVRTVKLFGQPTGRCTPQ  84
           GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct  61  GLQPGGPVRTVKLFGQPTGRCTPQ  84


>gi|41410183|ref|NP_963019.1| hypothetical protein MAP4085 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41399017|gb|AAS06635.1| hypothetical protein MAP_4085 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336460595|gb|EGO39488.1| virulence factor Mce family protein [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=343

 Score =  147 bits (370),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 66/83 (80%), Positives = 76/83 (92%), Gaps = 0/83 (0%)

Query  2    LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG  61
            LH + GHLEGIQQ LI++L  +D+VL KLP A+R+IGRAGGIYGDF+NFYLCDIS+KVNG
Sbjct  261  LHGTLGHLEGIQQALINDLPTVDNVLEKLPGAFRVIGRAGGIYGDFYNFYLCDISIKVNG  320

Query  62   LQPGGPVRTVKLFGQPTGRCTPQ  84
            LQPGGPVRT+KLFGQPTGRCTPQ
Sbjct  321  LQPGGPVRTIKLFGQPTGRCTPQ  343


>gi|254776982|ref|ZP_05218498.1| hypothetical protein MaviaA2_20256 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=343

 Score =  146 bits (369),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 66/83 (80%), Positives = 76/83 (92%), Gaps = 0/83 (0%)

Query  2    LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG  61
            LH + GHLEGIQQ LI++L  +D+VL KLP A+R+IGRAGGIYGDF+NFYLCDIS+KVNG
Sbjct  261  LHGTLGHLEGIQQALINDLPTVDNVLEKLPGAFRVIGRAGGIYGDFYNFYLCDISIKVNG  320

Query  62   LQPGGPVRTVKLFGQPTGRCTPQ  84
            LQPGGPVRT+KLFGQPTGRCTPQ
Sbjct  321  LQPGGPVRTIKLFGQPTGRCTPQ  343


>gi|118465867|ref|YP_883681.1| virulence factor Mce [Mycobacterium avium 104]
 gi|118167154|gb|ABK68051.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length=343

 Score =  146 bits (368),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 66/83 (80%), Positives = 75/83 (91%), Gaps = 0/83 (0%)

Query  2    LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG  61
            LH + GHLEGIQQ LI++L   D+VL KLP A+R+IGRAGGIYGDF+NFYLCDIS+KVNG
Sbjct  261  LHGTLGHLEGIQQALINDLPTADNVLEKLPGAFRVIGRAGGIYGDFYNFYLCDISIKVNG  320

Query  62   LQPGGPVRTVKLFGQPTGRCTPQ  84
            LQPGGPVRT+KLFGQPTGRCTPQ
Sbjct  321  LQPGGPVRTIKLFGQPTGRCTPQ  343


>gi|342858886|ref|ZP_08715540.1| hypothetical protein MCOL_08418 [Mycobacterium colombiense CECT 
3035]
 gi|342133127|gb|EGT86330.1| hypothetical protein MCOL_08418 [Mycobacterium colombiense CECT 
3035]
Length=343

 Score =  145 bits (365),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 66/83 (80%), Positives = 75/83 (91%), Gaps = 0/83 (0%)

Query  2    LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG  61
            L  + GHLEGIQQ LI++L  LD+VL KLP A+R+IGRAGGIYGDF+NFYLCDIS+KVNG
Sbjct  261  LRGTLGHLEGIQQSLINDLPTLDNVLEKLPGAFRVIGRAGGIYGDFYNFYLCDISIKVNG  320

Query  62   LQPGGPVRTVKLFGQPTGRCTPQ  84
            LQPGGPVRT+KLFGQPTGRCTPQ
Sbjct  321  LQPGGPVRTIKLFGQPTGRCTPQ  343


>gi|108797099|ref|YP_637296.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
 gi|119866184|ref|YP_936136.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
 gi|126432722|ref|YP_001068413.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
 gi|108767518|gb|ABG06240.1| Mammalian cell entry [Mycobacterium sp. MCS]
 gi|119692273|gb|ABL89346.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
 gi|126232522|gb|ABN95922.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length=343

 Score =  133 bits (334),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 56/84 (67%), Positives = 73/84 (87%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LL  + G+LE  QQPL+++  +L+ +L +LP+A +IIGRAGG+YGDFFNFY CD++LK+N
Sbjct  260  LLQDTVGYLEATQQPLVEQKGQLNDILVRLPNALKIIGRAGGVYGDFFNFYACDVTLKLN  319

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTVK++GQPTGRCTPQ
Sbjct  320  GLQPGGPVRTVKVWGQPTGRCTPQ  343


>gi|145221305|ref|YP_001131983.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
 gi|145213791|gb|ABP43195.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length=343

 Score =  127 bits (318),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 70/84 (84%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LL S+   LE + QPL+D+  +L+ +L ++PDA  IIGR+GGIYGDFFNFY CD++LK+N
Sbjct  260  LLQSTISKLEILNQPLVDQKDQLNQLLEQIPDALAIIGRSGGIYGDFFNFYACDVTLKLN  319

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTV+++ QPTGRCTPQ
Sbjct  320  GLQPGGPVRTVRVWSQPTGRCTPQ  343


>gi|315441807|ref|YP_004074686.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
 gi|315260110|gb|ADT96851.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length=343

 Score =  127 bits (318),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 70/84 (84%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LL S+   LE + QPL+D+  +L+ +L ++PDA  IIGR+GGIYGDFFNFY CD++LK+N
Sbjct  260  LLQSTISKLEILNQPLVDQRDQLNQLLEQIPDALAIIGRSGGIYGDFFNFYACDVTLKLN  319

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTV+++ QPTGRCTPQ
Sbjct  320  GLQPGGPVRTVRVWSQPTGRCTPQ  343


>gi|120401163|ref|YP_950992.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
 gi|119953981|gb|ABM10986.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
Length=343

 Score =  125 bits (314),  Expect = 2e-27, Method: Composition-based stats.
 Identities = 54/84 (65%), Positives = 69/84 (83%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LL  +   LE + QPL+D+  +L+ +L KLPDA  IIGR+GG+YGDFFNFY CD++LK+N
Sbjct  260  LLKDTVSKLEILNQPLVDQRDQLNDLLVKLPDALAIIGRSGGVYGDFFNFYACDVTLKLN  319

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTVK++ QP+GRCTPQ
Sbjct  320  GLQPGGPVRTVKVWSQPSGRCTPQ  343


>gi|240168190|ref|ZP_04746849.1| MCE-family protein Mce1B [Mycobacterium kansasii ATCC 12478]
Length=346

 Score =  122 bits (307),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 55/84 (66%), Positives = 66/84 (79%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLH +  +L+ +QQPLID+  EL+  L K+P A  +IGR  G YGDF NFY CDISL++N
Sbjct  263  LLHKTVNYLDAVQQPLIDQRQELNDFLHKVPTALNMIGRTIGSYGDFVNFYSCDISLRIN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTV+LF QPTGRCTPQ
Sbjct  323  GLQPGGPVRTVRLFTQPTGRCTPQ  346


>gi|183980444|ref|YP_001848735.1| MCE-family protein Mce1B [Mycobacterium marinum M]
 gi|183173770|gb|ACC38880.1| MCE-family protein Mce1B [Mycobacterium marinum M]
Length=346

 Score =  122 bits (306),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 56/84 (67%), Positives = 65/84 (78%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLH +  +L+ +QQPLID+  EL   L K+P A  +IGRA G YGDF NFY CDISLK+N
Sbjct  263  LLHKTVNYLDAVQQPLIDQRQELADFLHKVPTALNMIGRAIGSYGDFVNFYSCDISLKIN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTV+LF QPTGRC PQ
Sbjct  323  GLQPGGPVRTVRLFSQPTGRCAPQ  346


>gi|118616796|ref|YP_905128.1| MCE-family protein Mce1B [Mycobacterium ulcerans Agy99]
 gi|118568906|gb|ABL03657.1| MCE-family protein Mce1B [Mycobacterium ulcerans Agy99]
Length=346

 Score =  122 bits (306),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 56/84 (67%), Positives = 65/84 (78%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLH +  +L+ +QQPLID+  EL   L K+P A  +IGRA G YGDF NFY CDISLK+N
Sbjct  263  LLHKTVNYLDAVQQPLIDQRQELADFLHKVPTALNMIGRAIGSYGDFVNFYSCDISLKIN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTV+LF QPTGRC PQ
Sbjct  323  GLQPGGPVRTVRLFSQPTGRCAPQ  346


>gi|15828394|ref|NP_302657.1| hypothetical protein [Mycobacterium leprae TN]
 gi|221230871|ref|YP_002504287.1| putative secreted protein [Mycobacterium leprae Br4923]
 gi|13093824|emb|CAC32122.1| putative secreted protein [Mycobacterium leprae]
 gi|219933978|emb|CAR72690.1| putative secreted protein [Mycobacterium leprae Br4923]
Length=346

 Score =  122 bits (305),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 57/84 (68%), Positives = 65/84 (78%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLH S  +L+GIQQPLID+  +L+  L KLP     IGR  G YGDF NFY CDI+LK+N
Sbjct  263  LLHKSINYLDGIQQPLIDQRLQLEDYLHKLPTVLNQIGRTIGSYGDFVNFYSCDITLKIN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTV+LF QPTGRCTPQ
Sbjct  323  GLQPGGPVRTVRLFQQPTGRCTPQ  346


>gi|167969014|ref|ZP_02551291.1| mce-family protein mce2B [Mycobacterium tuberculosis H37Ra]
 gi|297633085|ref|ZP_06950865.1| MCE-family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297730063|ref|ZP_06959181.1| MCE-family protein [Mycobacterium tuberculosis KZN R506]
 gi|313657390|ref|ZP_07814270.1| MCE-family protein [Mycobacterium tuberculosis KZN V2475]
Length=59

 Score =  121 bits (303),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 58/59 (99%), Positives = 59/59 (100%), Gaps = 0/59 (0%)

Query  26  VLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTPQ  84
           +LGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct  1   MLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTPQ  59


>gi|41409703|ref|NP_962539.1| hypothetical protein MAP3605 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118463171|ref|YP_884134.1| virulence factor Mce [Mycobacterium avium 104]
 gi|254776555|ref|ZP_05218071.1| virulence factor Mce family protein [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|41398535|gb|AAS06155.1| hypothetical protein MAP_3605 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118164458|gb|ABK65355.1| virulence factor Mce family protein [Mycobacterium avium 104]
 gi|336460088|gb|EGO38997.1| virulence factor Mce family protein [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=346

 Score =  120 bits (300),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 65/84 (78%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLH +  +L+ +QQPLID+  +L   L K+P A  +IGRA G YGDF NFY CDI+LK+N
Sbjct  263  LLHKTLNYLDAVQQPLIDQQDQLQDYLKKVPTALNMIGRAIGSYGDFVNFYACDITLKIN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQ GGPVRTV+LF QPTGRCTPQ
Sbjct  323  GLQAGGPVRTVRLFQQPTGRCTPQ  346


>gi|342859376|ref|ZP_08716030.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
 gi|342133617|gb|EGT86820.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
Length=346

 Score =  120 bits (300),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 65/84 (78%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLH +  +L+ +QQPLID+  +L   L K+P A  +IGRA G YGDF NFY CDI+LK+N
Sbjct  263  LLHKTINYLDAVQQPLIDQQDQLQDYLKKVPTALNMIGRAIGSYGDFVNFYACDITLKIN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQ GGPVRTV+LF QPTGRCTPQ
Sbjct  323  GLQAGGPVRTVRLFQQPTGRCTPQ  346


>gi|118468987|ref|YP_884551.1| virulence factor Mce family protein [Mycobacterium smegmatis 
str. MC2 155]
 gi|118170274|gb|ABK71170.1| virulence factor Mce family protein [Mycobacterium smegmatis 
str. MC2 155]
Length=343

 Score =  120 bits (300),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 51/84 (61%), Positives = 69/84 (83%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LL  + G+L+ IQ PL+++  E+  +L ++P A +IIGRAGGIYGDFFNFY CD++LK+N
Sbjct  260  LLKDTIGYLDVIQAPLVEQKQEVSDILVQMPQALKIIGRAGGIYGDFFNFYACDLTLKLN  319

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTV++  QP+GRCTP+
Sbjct  320  GLQPGGPVRTVRITTQPSGRCTPK  343


>gi|254823474|ref|ZP_05228475.1| virulence factor Mce family protein [Mycobacterium intracellulare 
ATCC 13950]
Length=346

 Score =  119 bits (299),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 65/84 (78%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLH +  +L+ +QQPLID+  +L   L K+P A  +IGRA G YGDF NFY CDI+LK+N
Sbjct  263  LLHKTINYLDAVQQPLIDQQDQLQDYLKKVPTALNMIGRAIGSYGDFVNFYACDITLKIN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQ GGPVRTV+LF QPTGRCTPQ
Sbjct  323  GLQAGGPVRTVRLFQQPTGRCTPQ  346


>gi|296167383|ref|ZP_06849785.1| virulence factor mce family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897327|gb|EFG76931.1| virulence factor mce family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=346

 Score =  117 bits (294),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 64/84 (77%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLH +  +L+ IQQPLID+   L+    K+P A  +IGRA G YGDF N+Y CDI+LK N
Sbjct  263  LLHKTLNYLDAIQQPLIDQRDGLNDYFKKVPTALNMIGRAIGSYGDFVNYYACDITLKFN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTV+LF QPTGRCTPQ
Sbjct  323  GLQPGGPVRTVRLFQQPTGRCTPQ  346


>gi|31791348|ref|NP_853841.1| MCE-family protein MCE1B [Mycobacterium bovis AF2122/97]
 gi|121636082|ref|YP_976305.1| MCE-family protein mce1B [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224988555|ref|YP_002643242.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
 10 more sequence titles
 Length=346

 Score =  115 bits (289),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            L+  +  +L+ IQQP+ID+  ELD +L K P A   +GRA G YGDF NFYLCD+ +K N
Sbjct  263  LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            G Q GGPVRTVKLF QPTGRCTPQ
Sbjct  323  GFQAGGPVRTVKLFSQPTGRCTPQ  346


>gi|289748646|ref|ZP_06508024.1| MCE-family protein mce1B [Mycobacterium tuberculosis T92]
 gi|289689233|gb|EFD56662.1| MCE-family protein mce1B [Mycobacterium tuberculosis T92]
Length=346

 Score =  115 bits (289),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            L+  +  +L+ IQQP+ID+  ELD +L K P A   +GRA G YGDF NFYLCD+ +K N
Sbjct  263  LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            G Q GGPVRTVKLF QPTGRCTPQ
Sbjct  323  GFQAGGPVRTVKLFSQPTGRCTPQ  346


>gi|289441545|ref|ZP_06431289.1| MCE-family protein mce1B [Mycobacterium tuberculosis T46]
 gi|289414464|gb|EFD11704.1| MCE-family protein mce1B [Mycobacterium tuberculosis T46]
Length=346

 Score =  115 bits (289),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            L+  +  +L+ IQQP+ID+  ELD +L K P A   +GRA G YGDF NFYLCD+ +K N
Sbjct  263  LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            G Q GGPVRTVKLF QPTGRCTPQ
Sbjct  323  GFQAGGPVRTVKLFSQPTGRCTPQ  346


>gi|15607311|ref|NP_214684.1| MCE-family protein MCE1B [Mycobacterium tuberculosis H37Rv]
 gi|15839548|ref|NP_334585.1| virulence factor mce family protein [Mycobacterium tuberculosis 
CDC1551]
 gi|148659934|ref|YP_001281457.1| MCE-family protein Mce1B [Mycobacterium tuberculosis H37Ra]
 56 more sequence titles
 Length=346

 Score =  115 bits (289),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            L+  +  +L+ IQQP+ID+  ELD +L K P A   +GRA G YGDF NFYLCD+ +K N
Sbjct  263  LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            G Q GGPVRTVKLF QPTGRCTPQ
Sbjct  323  GFQAGGPVRTVKLFSQPTGRCTPQ  346


>gi|289568069|ref|ZP_06448296.1| MCE-family protein mce1B [Mycobacterium tuberculosis T17]
 gi|289541822|gb|EFD45471.1| MCE-family protein mce1B [Mycobacterium tuberculosis T17]
Length=332

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            L+  +  +L+ IQQP+ID+  ELD +L K P A   +GRA G YGDF NFYLCD+ +K N
Sbjct  249  LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN  308

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            G Q GGPVRTVKLF QPTGRCTPQ
Sbjct  309  GFQAGGPVRTVKLFSQPTGRCTPQ  332


>gi|294994645|ref|ZP_06800336.1| MCE-family protein mce1B [Mycobacterium tuberculosis 210]
Length=116

 Score =  114 bits (286),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            L+  +  +L+ IQQP+ID+  ELD +L K P A   +GRA G YGDF NFYLCD+ +K N
Sbjct  33   LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN  92

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            G Q GGPVRTVKLF QPTGRCTPQ
Sbjct  93   GFQAGGPVRTVKLFSQPTGRCTPQ  116


>gi|340625207|ref|YP_004743659.1| MCE-family protein MCE1B [Mycobacterium canettii CIPT 140010059]
 gi|340003397|emb|CCC42517.1| MCE-family protein MCE1B [Mycobacterium canettii CIPT 140010059]
Length=346

 Score =  114 bits (285),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 51/84 (61%), Positives = 62/84 (74%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            L+  +  +L+ IQQP+ID+  EL+ +L K P A   +GRA G YGDF NFYLCD+ +K N
Sbjct  263  LVRKTISYLDAIQQPVIDQRVELNDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            G Q GGPVRTVKLF QPTGRCTPQ
Sbjct  323  GFQAGGPVRTVKLFSQPTGRCTPQ  346


>gi|296165086|ref|ZP_06847639.1| virulence factor mce family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295899579|gb|EFG79032.1| virulence factor mce family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=346

 Score =  112 bits (279),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 47/84 (56%), Positives = 66/84 (79%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LLH +  +L+ +QQPL+D+  +L  ++ K P A  +IGR+ G+YGD+ NFYLCD+S++ N
Sbjct  263  LLHKAINYLQALQQPLVDQRDQLGDLIHKTPTALNLIGRSIGLYGDWVNFYLCDLSIRWN  322

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQ GGPVRTV+++ QPTGRCTPQ
Sbjct  323  GLQAGGPVRTVRIWQQPTGRCTPQ  346


>gi|296163929|ref|ZP_06846565.1| virulence factor mce family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900710|gb|EFG80080.1| virulence factor mce family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=347

 Score =  110 bits (275),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 49/84 (59%), Positives = 63/84 (75%), Gaps = 0/84 (0%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            LL  + G+++   QPLID L  +D VL   P + + +   GG+YGDFFNFY CD++LKV+
Sbjct  264  LLQKAVGYVQNTLQPLIDRLDYVDGVLRDAPQSAKRVAGIGGLYGDFFNFYACDVTLKVD  323

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            GLQPGGPVRTVKL+ QPTGRCTP+
Sbjct  324  GLQPGGPVRTVKLWSQPTGRCTPK  347


>gi|333988763|ref|YP_004521377.1| MCE-family protein Mce1B [Mycobacterium sp. JDM601]
 gi|333484731|gb|AEF34123.1| MCE-family protein Mce1B [Mycobacterium sp. JDM601]
Length=342

 Score = 95.1 bits (235),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 46/83 (56%), Positives = 64/83 (78%), Gaps = 4/83 (4%)

Query  2    LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG  61
            LHS F  + G + P  D +A+++ +L ++P A ++IGR G +YGDFFNFY+CD ++K+ G
Sbjct  264  LHSIF-PVAGPEPP--DRMADVEGLLERIPQALKLIGRTG-VYGDFFNFYICDATIKLPG  319

Query  62   LQPGGPVRTVKLFGQPTGRCTPQ  84
            LQPGGPVR V+L+ QPTGRCTPQ
Sbjct  320  LQPGGPVRNVRLWQQPTGRCTPQ  342


>gi|120405351|ref|YP_955180.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
 gi|119958169|gb|ABM15174.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
Length=342

 Score = 76.3 bits (186),  Expect = 2e-12, Method: Composition-based stats.
 Identities = 37/62 (60%), Positives = 45/62 (73%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
            +D +L  LPDAYR++GR G IYGDFF FYLCD+ LKVNG   GG    VK+ GQ +GRC 
Sbjct  284  VDDLLATLPDAYRVLGRQG-IYGDFFAFYLCDLVLKVNG--KGGQPVYVKVAGQDSGRCA  340

Query  83   PQ  84
            P+
Sbjct  341  PR  342


>gi|126436741|ref|YP_001072432.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
 gi|126236541|gb|ABN99941.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length=342

 Score = 73.9 bits (180),  Expect = 8e-12, Method: Composition-based stats.
 Identities = 36/62 (59%), Positives = 44/62 (71%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
            +D++L  LPD YRI+GR G +YGDFF FYLCD  LKVNG   GG    +K+ GQ TGRC 
Sbjct  284  VDNLLNTLPDTYRILGREG-LYGDFFGFYLCDAILKVNG--KGGQPVFIKVAGQDTGRCA  340

Query  83   PQ  84
            P+
Sbjct  341  PR  342


>gi|240170714|ref|ZP_04749373.1| virulence factor Mce family protein [Mycobacterium kansasii ATCC 
12478]
Length=342

 Score = 73.2 bits (178),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 38/84 (46%), Positives = 55/84 (66%), Gaps = 7/84 (8%)

Query  1    LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN  60
            ++H S    E I   ++ +    D +L  LPDAY+++ R G +YGDFF+FY+CD+ LK+N
Sbjct  266  IIHQS----ERIADVILADRDYFDDLLNTLPDAYQMLNRQG-LYGDFFSFYMCDLLLKLN  320

Query  61   GLQPGGPVRTVKLFGQPTGRCTPQ  84
            G   GG    VK+ GQP+GRCTP+
Sbjct  321  G--KGGQPIYVKMIGQPSGRCTPR  342


>gi|126436759|ref|YP_001072450.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
 gi|126236559|gb|ABN99959.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length=342

 Score = 72.8 bits (177),  Expect = 1e-11, Method: Composition-based stats.
 Identities = 37/69 (54%), Positives = 48/69 (70%), Gaps = 3/69 (4%)

Query  16   LIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFG  75
            ++ + A +D +L  LPDAY+ + R G +YGDFF+FYLCD+ +KVNG   GG    VKL G
Sbjct  277  VVADHAYVDDLLNTLPDAYQQLNRQG-MYGDFFSFYLCDLIVKVNG--KGGQPVFVKLAG  333

Query  76   QPTGRCTPQ  84
            Q TGRC PQ
Sbjct  334  QSTGRCAPQ  342


>gi|183984023|ref|YP_001852314.1| MCE-family protein Mce3B_1 [Mycobacterium marinum M]
 gi|183177349|gb|ACC42459.1| MCE-family protein Mce3B_1 [Mycobacterium marinum M]
Length=343

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 36/61 (60%), Positives = 47/61 (78%), Gaps = 3/61 (4%)

Query  24   DHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTP  83
            D+++  LPDAY+ + R G IYGDFF+FYLCD+ LK+NG + G PV  VK+ GQPTGRC P
Sbjct  286  DNLINTLPDAYQALSRQG-IYGDFFSFYLCDVVLKLNG-RGGQPVY-VKVAGQPTGRCAP  342

Query  84   Q  84
            +
Sbjct  343  R  343


>gi|118619128|ref|YP_907460.1| MCE-family protein Mce3B_1 [Mycobacterium ulcerans Agy99]
 gi|118571238|gb|ABL05989.1| MCE-family protein Mce3B_1 [Mycobacterium ulcerans Agy99]
Length=343

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 36/61 (60%), Positives = 47/61 (78%), Gaps = 3/61 (4%)

Query  24   DHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTP  83
            D+++  LPDAY+ + R G IYGDFF+FYLCD+ LK+NG + G PV  VK+ GQPTGRC P
Sbjct  286  DNLINTLPDAYQALSRQG-IYGDFFSFYLCDVVLKLNG-RGGQPVY-VKVAGQPTGRCAP  342

Query  84   Q  84
            +
Sbjct  343  R  343


>gi|120404935|ref|YP_954764.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
 gi|119957753|gb|ABM14758.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
Length=342

 Score = 71.2 bits (173),  Expect = 5e-11, Method: Composition-based stats.
 Identities = 34/62 (55%), Positives = 45/62 (73%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
            LD++L  LPD YR +GR G +YGDFF+FYLC++ LK+NG   GG    VK+ GQ +GRC 
Sbjct  284  LDNLLNTLPDKYRALGRQG-MYGDFFSFYLCELVLKLNG--KGGQPVYVKIAGQDSGRCA  340

Query  83   PQ  84
            P+
Sbjct  341  PK  342


>gi|254820122|ref|ZP_05225123.1| virulence factor Mce family protein [Mycobacterium intracellulare 
ATCC 13950]
Length=342

 Score = 70.9 bits (172),  Expect = 5e-11, Method: Composition-based stats.
 Identities = 34/62 (55%), Positives = 44/62 (71%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
             D +L  LPDAY+ + R G +YGD+F+FYLCD+ LKVNG   GG    +KL GQ +GRCT
Sbjct  284  FDDLLNTLPDAYQALDRQG-LYGDYFSFYLCDLLLKVNG--KGGQPVYIKLAGQSSGRCT  340

Query  83   PQ  84
            P+
Sbjct  341  PK  342


>gi|118469807|ref|YP_884760.1| virulence factor Mce family protein [Mycobacterium smegmatis 
str. MC2 155]
 gi|118171094|gb|ABK71990.1| virulence factor Mce family protein [Mycobacterium smegmatis 
str. MC2 155]
Length=342

 Score = 70.9 bits (172),  Expect = 6e-11, Method: Composition-based stats.
 Identities = 34/62 (55%), Positives = 44/62 (71%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
            LD++L  LPD YR++GR   +YGD+F+FYLCD+ LK+NG   GG    VKL  Q TGRC 
Sbjct  284  LDNILNTLPDKYRVLGRQA-MYGDYFSFYLCDLILKLNG--KGGQPVYVKLAEQVTGRCA  340

Query  83   PQ  84
            P+
Sbjct  341  PK  342


>gi|315443154|ref|YP_004076033.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
 gi|315261457|gb|ADT98198.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length=343

 Score = 70.9 bits (172),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 34/62 (55%), Positives = 45/62 (73%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
             D+++  LPDAY+++ R G IYGDFF+FYLCDI LK+NG   GG    VK+ GQ +GRC 
Sbjct  285  FDNLINTLPDAYQVLARQG-IYGDFFSFYLCDIVLKLNG--KGGQPVYVKVAGQSSGRCA  341

Query  83   PQ  84
            P+
Sbjct  342  PR  343


>gi|120405555|ref|YP_955384.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
 gi|119958373|gb|ABM15378.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
Length=346

 Score = 70.9 bits (172),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 36/62 (59%), Positives = 43/62 (70%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
             D+ L  LPDAY+ + R G IYGDFF+FYLCDI LK+NG   GG    VK+ GQ TGRC 
Sbjct  288  FDNFLNTLPDAYQALARQG-IYGDFFSFYLCDIVLKLNG--KGGQPVYVKVAGQSTGRCA  344

Query  83   PQ  84
            P+
Sbjct  345  PR  346


>gi|145222690|ref|YP_001133368.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
 gi|145215176|gb|ABP44580.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length=343

 Score = 70.9 bits (172),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 34/62 (55%), Positives = 45/62 (73%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
             D+++  LPDAY+++ R G IYGDFF+FYLCDI LK+NG   GG    VK+ GQ +GRC 
Sbjct  285  FDNLINTLPDAYQVLARQG-IYGDFFSFYLCDIVLKLNG--KGGQPVYVKVAGQSSGRCA  341

Query  83   PQ  84
            P+
Sbjct  342  PR  343


>gi|226306855|ref|YP_002766815.1| Mce family protein [Rhodococcus erythropolis PR4]
 gi|226185972|dbj|BAH34076.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length=340

 Score = 70.5 bits (171),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 37/80 (47%), Positives = 50/80 (63%), Gaps = 3/80 (3%)

Query  5    SFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQP  64
            +   L+    PLI++ +ELD +L  +P  Y+ + R G  YG FFNFYLC I+LKV+G   
Sbjct  264  NLSKLDASLNPLIEQQSELDRILASMPSNYKQLIRVGS-YGSFFNFYLCGIALKVDGAD-  321

Query  65   GGPVRTVKLFGQPTGRCTPQ  84
            G P+ TV L  Q TGRC P+
Sbjct  322  GTPL-TVDLVDQTTGRCAPR  340


>gi|120401389|ref|YP_951218.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
 gi|119954207|gb|ABM11212.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
Length=342

 Score = 70.1 bits (170),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 35/62 (57%), Positives = 46/62 (75%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
            LD++L  LPD Y+ +GR G +YGDFF+FYLC+I LK+NG   GG    VK+ GQ +GRCT
Sbjct  284  LDNLLNTLPDRYQALGRQG-MYGDFFSFYLCEIVLKLNG--KGGQPVYVKVAGQDSGRCT  340

Query  83   PQ  84
            P+
Sbjct  341  PR  342


>gi|183982887|ref|YP_001851178.1| MCE-family protein Mce3B [Mycobacterium marinum M]
 gi|183176213|gb|ACC41323.1| MCE-family protein Mce3B [Mycobacterium marinum M]
Length=342

 Score = 69.7 bits (169),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 35/62 (57%), Positives = 44/62 (71%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
            LD++L  LPD Y+ + R G +YGDFF FYLCD+ LKVNG   GG    +K+ GQ TGRCT
Sbjct  284  LDNLLNTLPDRYQALVRQG-MYGDFFAFYLCDVVLKVNG--KGGQPVYIKVAGQATGRCT  340

Query  83   PQ  84
            P+
Sbjct  341  PK  342


>gi|118618292|ref|YP_906624.1| MCE-family protein Mce3B [Mycobacterium ulcerans Agy99]
 gi|118570402|gb|ABL05153.1| MCE-family protein Mce3B [Mycobacterium ulcerans Agy99]
Length=342

 Score = 69.7 bits (169),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 35/62 (57%), Positives = 44/62 (71%), Gaps = 3/62 (4%)

Query  23   LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT  82
            LD++L  LPD Y+ + R G +YGDFF FYLCD+ LKVNG   GG    +K+ GQ TGRCT
Sbjct  284  LDNLLNTLPDRYQALVRQG-MYGDFFAFYLCDVVLKVNG--KGGQPVYIKVAGQATGRCT  340

Query  83   PQ  84
            P+
Sbjct  341  PK  342



Lambda     K      H
   0.324    0.149    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 131923386480




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40