BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0590A
Length=84
Score E
Sequences producing significant alignments: (Bits) Value
gi|31791772|ref|NP_854265.1| MCE-family protein MCE2B [Mycobacte... 179 2e-43
gi|339630658|ref|YP_004722300.1| MCE-family protein MCE2B [Mycob... 179 2e-43
gi|289573190|ref|ZP_06453417.1| MCE-family protein mce2B [Mycoba... 179 2e-43
gi|289446143|ref|ZP_06435887.1| MCE-family protein [Mycobacteriu... 178 2e-43
gi|339297275|gb|AEJ49385.1| MCE-family protein [Mycobacterium tu... 178 3e-43
gi|15839993|ref|NP_335030.1| hypothetical protein MT0620 [Mycoba... 171 3e-41
gi|41410183|ref|NP_963019.1| hypothetical protein MAP4085 [Mycob... 147 7e-34
gi|254776982|ref|ZP_05218498.1| hypothetical protein MaviaA2_202... 146 8e-34
gi|118465867|ref|YP_883681.1| virulence factor Mce [Mycobacteriu... 146 1e-33
gi|342858886|ref|ZP_08715540.1| hypothetical protein MCOL_08418 ... 145 3e-33
gi|108797099|ref|YP_637296.1| virulence factor MCE-like protein ... 133 1e-29
gi|145221305|ref|YP_001131983.1| virulence factor Mce family pro... 127 8e-28
gi|315441807|ref|YP_004074686.1| virulence factor Mce family pro... 127 8e-28
gi|120401163|ref|YP_950992.1| virulence factor Mce family protei... 125 2e-27
gi|240168190|ref|ZP_04746849.1| MCE-family protein Mce1B [Mycoba... 122 1e-26
gi|183980444|ref|YP_001848735.1| MCE-family protein Mce1B [Mycob... 122 2e-26
gi|118616796|ref|YP_905128.1| MCE-family protein Mce1B [Mycobact... 122 2e-26
gi|15828394|ref|NP_302657.1| hypothetical protein [Mycobacterium... 122 2e-26
gi|167969014|ref|ZP_02551291.1| mce-family protein mce2B [Mycoba... 121 4e-26
gi|41409703|ref|NP_962539.1| hypothetical protein MAP3605 [Mycob... 120 9e-26
gi|342859376|ref|ZP_08716030.1| virulence factor Mce [Mycobacter... 120 1e-25
gi|118468987|ref|YP_884551.1| virulence factor Mce family protei... 120 1e-25
gi|254823474|ref|ZP_05228475.1| virulence factor Mce family prot... 119 1e-25
gi|296167383|ref|ZP_06849785.1| virulence factor mce family prot... 117 4e-25
gi|31791348|ref|NP_853841.1| MCE-family protein MCE1B [Mycobacte... 115 2e-24
gi|289748646|ref|ZP_06508024.1| MCE-family protein mce1B [Mycoba... 115 2e-24
gi|289441545|ref|ZP_06431289.1| MCE-family protein mce1B [Mycoba... 115 2e-24
gi|15607311|ref|NP_214684.1| MCE-family protein MCE1B [Mycobacte... 115 2e-24
gi|289568069|ref|ZP_06448296.1| MCE-family protein mce1B [Mycoba... 115 2e-24
gi|294994645|ref|ZP_06800336.1| MCE-family protein mce1B [Mycoba... 114 4e-24
gi|340625207|ref|YP_004743659.1| MCE-family protein MCE1B [Mycob... 114 5e-24
gi|296165086|ref|ZP_06847639.1| virulence factor mce family prot... 112 2e-23
gi|296163929|ref|ZP_06846565.1| virulence factor mce family prot... 110 7e-23
gi|333988763|ref|YP_004521377.1| MCE-family protein Mce1B [Mycob... 95.1 3e-18
gi|120405351|ref|YP_955180.1| virulence factor Mce family protei... 76.3 2e-12
gi|126436741|ref|YP_001072432.1| virulence factor Mce family pro... 73.9 8e-12
gi|240170714|ref|ZP_04749373.1| virulence factor Mce family prot... 73.2 1e-11
gi|126436759|ref|YP_001072450.1| virulence factor Mce family pro... 72.8 1e-11
gi|183984023|ref|YP_001852314.1| MCE-family protein Mce3B_1 [Myc... 72.8 2e-11
gi|118619128|ref|YP_907460.1| MCE-family protein Mce3B_1 [Mycoba... 72.8 2e-11
gi|120404935|ref|YP_954764.1| virulence factor Mce family protei... 71.2 5e-11
gi|254820122|ref|ZP_05225123.1| virulence factor Mce family prot... 70.9 5e-11
gi|118469807|ref|YP_884760.1| virulence factor Mce family protei... 70.9 6e-11
gi|315443154|ref|YP_004076033.1| virulence factor Mce family pro... 70.9 6e-11
gi|120405555|ref|YP_955384.1| virulence factor Mce family protei... 70.9 6e-11
gi|145222690|ref|YP_001133368.1| virulence factor Mce family pro... 70.9 6e-11
gi|226306855|ref|YP_002766815.1| Mce family protein [Rhodococcus... 70.5 8e-11
gi|120401389|ref|YP_951218.1| virulence factor Mce family protei... 70.1 1e-10
gi|183982887|ref|YP_001851178.1| MCE-family protein Mce3B [Mycob... 69.7 1e-10
gi|118618292|ref|YP_906624.1| MCE-family protein Mce3B [Mycobact... 69.7 1e-10
>gi|31791772|ref|NP_854265.1| MCE-family protein MCE2B [Mycobacterium bovis AF2122/97]
gi|121636508|ref|YP_976731.1| mce-family protein mce2B [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988980|ref|YP_002643667.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
16 more sequence titles
Length=343
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct 260 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 319
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct 320 GLQPGGPVRTVKLFGQPTGRCTPQ 343
>gi|339630658|ref|YP_004722300.1| MCE-family protein MCE2B [Mycobacterium africanum GM041182]
gi|339330014|emb|CCC25669.1| MCE-family protein MCE2B [Mycobacterium africanum GM041182]
Length=343
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct 260 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 319
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct 320 GLQPGGPVRTVKLFGQPTGRCTPQ 343
>gi|289573190|ref|ZP_06453417.1| MCE-family protein mce2B [Mycobacterium tuberculosis K85]
gi|289537621|gb|EFD42199.1| MCE-family protein mce2B [Mycobacterium tuberculosis K85]
Length=343
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct 260 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 319
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct 320 GLQPGGPVRTVKLFGQPTGRCTPQ 343
>gi|289446143|ref|ZP_06435887.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
gi|289749087|ref|ZP_06508465.1| MCE-family protein mce2b [Mycobacterium tuberculosis T92]
gi|289756669|ref|ZP_06516047.1| MCE-family protein mce2B [Mycobacterium tuberculosis T85]
gi|289419101|gb|EFD16302.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
gi|289689674|gb|EFD57103.1| MCE-family protein mce2b [Mycobacterium tuberculosis T92]
gi|289712233|gb|EFD76245.1| MCE-family protein mce2B [Mycobacterium tuberculosis T85]
Length=355
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct 272 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 331
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct 332 GLQPGGPVRTVKLFGQPTGRCTPQ 355
>gi|339297275|gb|AEJ49385.1| MCE-family protein [Mycobacterium tuberculosis CCDC5180]
Length=210
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct 127 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 186
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct 187 GLQPGGPVRTVKLFGQPTGRCTPQ 210
>gi|15839993|ref|NP_335030.1| hypothetical protein MT0620 [Mycobacterium tuberculosis CDC1551]
gi|57116757|ref|YP_177627.1| MCE family-like protein [Mycobacterium tuberculosis H37Rv]
gi|148660360|ref|YP_001281883.1| MCE family-like protein [Mycobacterium tuberculosis H37Ra]
22 more sequence titles
Length=84
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/84 (99%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
+LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN
Sbjct 1 MLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
>gi|41410183|ref|NP_963019.1| hypothetical protein MAP4085 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399017|gb|AAS06635.1| hypothetical protein MAP_4085 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460595|gb|EGO39488.1| virulence factor Mce family protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length=343
Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/83 (80%), Positives = 76/83 (92%), Gaps = 0/83 (0%)
Query 2 LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG 61
LH + GHLEGIQQ LI++L +D+VL KLP A+R+IGRAGGIYGDF+NFYLCDIS+KVNG
Sbjct 261 LHGTLGHLEGIQQALINDLPTVDNVLEKLPGAFRVIGRAGGIYGDFYNFYLCDISIKVNG 320
Query 62 LQPGGPVRTVKLFGQPTGRCTPQ 84
LQPGGPVRT+KLFGQPTGRCTPQ
Sbjct 321 LQPGGPVRTIKLFGQPTGRCTPQ 343
>gi|254776982|ref|ZP_05218498.1| hypothetical protein MaviaA2_20256 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=343
Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/83 (80%), Positives = 76/83 (92%), Gaps = 0/83 (0%)
Query 2 LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG 61
LH + GHLEGIQQ LI++L +D+VL KLP A+R+IGRAGGIYGDF+NFYLCDIS+KVNG
Sbjct 261 LHGTLGHLEGIQQALINDLPTVDNVLEKLPGAFRVIGRAGGIYGDFYNFYLCDISIKVNG 320
Query 62 LQPGGPVRTVKLFGQPTGRCTPQ 84
LQPGGPVRT+KLFGQPTGRCTPQ
Sbjct 321 LQPGGPVRTIKLFGQPTGRCTPQ 343
>gi|118465867|ref|YP_883681.1| virulence factor Mce [Mycobacterium avium 104]
gi|118167154|gb|ABK68051.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length=343
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/83 (80%), Positives = 75/83 (91%), Gaps = 0/83 (0%)
Query 2 LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG 61
LH + GHLEGIQQ LI++L D+VL KLP A+R+IGRAGGIYGDF+NFYLCDIS+KVNG
Sbjct 261 LHGTLGHLEGIQQALINDLPTADNVLEKLPGAFRVIGRAGGIYGDFYNFYLCDISIKVNG 320
Query 62 LQPGGPVRTVKLFGQPTGRCTPQ 84
LQPGGPVRT+KLFGQPTGRCTPQ
Sbjct 321 LQPGGPVRTIKLFGQPTGRCTPQ 343
>gi|342858886|ref|ZP_08715540.1| hypothetical protein MCOL_08418 [Mycobacterium colombiense CECT
3035]
gi|342133127|gb|EGT86330.1| hypothetical protein MCOL_08418 [Mycobacterium colombiense CECT
3035]
Length=343
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/83 (80%), Positives = 75/83 (91%), Gaps = 0/83 (0%)
Query 2 LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG 61
L + GHLEGIQQ LI++L LD+VL KLP A+R+IGRAGGIYGDF+NFYLCDIS+KVNG
Sbjct 261 LRGTLGHLEGIQQSLINDLPTLDNVLEKLPGAFRVIGRAGGIYGDFYNFYLCDISIKVNG 320
Query 62 LQPGGPVRTVKLFGQPTGRCTPQ 84
LQPGGPVRT+KLFGQPTGRCTPQ
Sbjct 321 LQPGGPVRTIKLFGQPTGRCTPQ 343
>gi|108797099|ref|YP_637296.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866184|ref|YP_936136.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126432722|ref|YP_001068413.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|108767518|gb|ABG06240.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692273|gb|ABL89346.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126232522|gb|ABN95922.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length=343
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/84 (67%), Positives = 73/84 (87%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LL + G+LE QQPL+++ +L+ +L +LP+A +IIGRAGG+YGDFFNFY CD++LK+N
Sbjct 260 LLQDTVGYLEATQQPLVEQKGQLNDILVRLPNALKIIGRAGGVYGDFFNFYACDVTLKLN 319
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTVK++GQPTGRCTPQ
Sbjct 320 GLQPGGPVRTVKVWGQPTGRCTPQ 343
>gi|145221305|ref|YP_001131983.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213791|gb|ABP43195.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length=343
Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 54/84 (65%), Positives = 70/84 (84%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LL S+ LE + QPL+D+ +L+ +L ++PDA IIGR+GGIYGDFFNFY CD++LK+N
Sbjct 260 LLQSTISKLEILNQPLVDQKDQLNQLLEQIPDALAIIGRSGGIYGDFFNFYACDVTLKLN 319
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTV+++ QPTGRCTPQ
Sbjct 320 GLQPGGPVRTVRVWSQPTGRCTPQ 343
>gi|315441807|ref|YP_004074686.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260110|gb|ADT96851.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length=343
Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 54/84 (65%), Positives = 70/84 (84%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LL S+ LE + QPL+D+ +L+ +L ++PDA IIGR+GGIYGDFFNFY CD++LK+N
Sbjct 260 LLQSTISKLEILNQPLVDQRDQLNQLLEQIPDALAIIGRSGGIYGDFFNFYACDVTLKLN 319
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTV+++ QPTGRCTPQ
Sbjct 320 GLQPGGPVRTVRVWSQPTGRCTPQ 343
>gi|120401163|ref|YP_950992.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119953981|gb|ABM10986.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length=343
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/84 (65%), Positives = 69/84 (83%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LL + LE + QPL+D+ +L+ +L KLPDA IIGR+GG+YGDFFNFY CD++LK+N
Sbjct 260 LLKDTVSKLEILNQPLVDQRDQLNDLLVKLPDALAIIGRSGGVYGDFFNFYACDVTLKLN 319
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTVK++ QP+GRCTPQ
Sbjct 320 GLQPGGPVRTVKVWSQPSGRCTPQ 343
>gi|240168190|ref|ZP_04746849.1| MCE-family protein Mce1B [Mycobacterium kansasii ATCC 12478]
Length=346
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/84 (66%), Positives = 66/84 (79%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLH + +L+ +QQPLID+ EL+ L K+P A +IGR G YGDF NFY CDISL++N
Sbjct 263 LLHKTVNYLDAVQQPLIDQRQELNDFLHKVPTALNMIGRTIGSYGDFVNFYSCDISLRIN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTV+LF QPTGRCTPQ
Sbjct 323 GLQPGGPVRTVRLFTQPTGRCTPQ 346
>gi|183980444|ref|YP_001848735.1| MCE-family protein Mce1B [Mycobacterium marinum M]
gi|183173770|gb|ACC38880.1| MCE-family protein Mce1B [Mycobacterium marinum M]
Length=346
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/84 (67%), Positives = 65/84 (78%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLH + +L+ +QQPLID+ EL L K+P A +IGRA G YGDF NFY CDISLK+N
Sbjct 263 LLHKTVNYLDAVQQPLIDQRQELADFLHKVPTALNMIGRAIGSYGDFVNFYSCDISLKIN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTV+LF QPTGRC PQ
Sbjct 323 GLQPGGPVRTVRLFSQPTGRCAPQ 346
>gi|118616796|ref|YP_905128.1| MCE-family protein Mce1B [Mycobacterium ulcerans Agy99]
gi|118568906|gb|ABL03657.1| MCE-family protein Mce1B [Mycobacterium ulcerans Agy99]
Length=346
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/84 (67%), Positives = 65/84 (78%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLH + +L+ +QQPLID+ EL L K+P A +IGRA G YGDF NFY CDISLK+N
Sbjct 263 LLHKTVNYLDAVQQPLIDQRQELADFLHKVPTALNMIGRAIGSYGDFVNFYSCDISLKIN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTV+LF QPTGRC PQ
Sbjct 323 GLQPGGPVRTVRLFSQPTGRCAPQ 346
>gi|15828394|ref|NP_302657.1| hypothetical protein [Mycobacterium leprae TN]
gi|221230871|ref|YP_002504287.1| putative secreted protein [Mycobacterium leprae Br4923]
gi|13093824|emb|CAC32122.1| putative secreted protein [Mycobacterium leprae]
gi|219933978|emb|CAR72690.1| putative secreted protein [Mycobacterium leprae Br4923]
Length=346
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/84 (68%), Positives = 65/84 (78%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLH S +L+GIQQPLID+ +L+ L KLP IGR G YGDF NFY CDI+LK+N
Sbjct 263 LLHKSINYLDGIQQPLIDQRLQLEDYLHKLPTVLNQIGRTIGSYGDFVNFYSCDITLKIN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTV+LF QPTGRCTPQ
Sbjct 323 GLQPGGPVRTVRLFQQPTGRCTPQ 346
>gi|167969014|ref|ZP_02551291.1| mce-family protein mce2B [Mycobacterium tuberculosis H37Ra]
gi|297633085|ref|ZP_06950865.1| MCE-family protein [Mycobacterium tuberculosis KZN 4207]
gi|297730063|ref|ZP_06959181.1| MCE-family protein [Mycobacterium tuberculosis KZN R506]
gi|313657390|ref|ZP_07814270.1| MCE-family protein [Mycobacterium tuberculosis KZN V2475]
Length=59
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/59 (99%), Positives = 59/59 (100%), Gaps = 0/59 (0%)
Query 26 VLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTPQ 84
+LGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTPQ
Sbjct 1 MLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTPQ 59
>gi|41409703|ref|NP_962539.1| hypothetical protein MAP3605 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463171|ref|YP_884134.1| virulence factor Mce [Mycobacterium avium 104]
gi|254776555|ref|ZP_05218071.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41398535|gb|AAS06155.1| hypothetical protein MAP_3605 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118164458|gb|ABK65355.1| virulence factor Mce family protein [Mycobacterium avium 104]
gi|336460088|gb|EGO38997.1| virulence factor Mce family protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length=346
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/84 (65%), Positives = 65/84 (78%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLH + +L+ +QQPLID+ +L L K+P A +IGRA G YGDF NFY CDI+LK+N
Sbjct 263 LLHKTLNYLDAVQQPLIDQQDQLQDYLKKVPTALNMIGRAIGSYGDFVNFYACDITLKIN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQ GGPVRTV+LF QPTGRCTPQ
Sbjct 323 GLQAGGPVRTVRLFQQPTGRCTPQ 346
>gi|342859376|ref|ZP_08716030.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
gi|342133617|gb|EGT86820.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
Length=346
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/84 (65%), Positives = 65/84 (78%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLH + +L+ +QQPLID+ +L L K+P A +IGRA G YGDF NFY CDI+LK+N
Sbjct 263 LLHKTINYLDAVQQPLIDQQDQLQDYLKKVPTALNMIGRAIGSYGDFVNFYACDITLKIN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQ GGPVRTV+LF QPTGRCTPQ
Sbjct 323 GLQAGGPVRTVRLFQQPTGRCTPQ 346
>gi|118468987|ref|YP_884551.1| virulence factor Mce family protein [Mycobacterium smegmatis
str. MC2 155]
gi|118170274|gb|ABK71170.1| virulence factor Mce family protein [Mycobacterium smegmatis
str. MC2 155]
Length=343
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/84 (61%), Positives = 69/84 (83%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LL + G+L+ IQ PL+++ E+ +L ++P A +IIGRAGGIYGDFFNFY CD++LK+N
Sbjct 260 LLKDTIGYLDVIQAPLVEQKQEVSDILVQMPQALKIIGRAGGIYGDFFNFYACDLTLKLN 319
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTV++ QP+GRCTP+
Sbjct 320 GLQPGGPVRTVRITTQPSGRCTPK 343
>gi|254823474|ref|ZP_05228475.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length=346
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/84 (65%), Positives = 65/84 (78%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLH + +L+ +QQPLID+ +L L K+P A +IGRA G YGDF NFY CDI+LK+N
Sbjct 263 LLHKTINYLDAVQQPLIDQQDQLQDYLKKVPTALNMIGRAIGSYGDFVNFYACDITLKIN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQ GGPVRTV+LF QPTGRCTPQ
Sbjct 323 GLQAGGPVRTVRLFQQPTGRCTPQ 346
>gi|296167383|ref|ZP_06849785.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897327|gb|EFG76931.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=346
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/84 (65%), Positives = 64/84 (77%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLH + +L+ IQQPLID+ L+ K+P A +IGRA G YGDF N+Y CDI+LK N
Sbjct 263 LLHKTLNYLDAIQQPLIDQRDGLNDYFKKVPTALNMIGRAIGSYGDFVNYYACDITLKFN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTV+LF QPTGRCTPQ
Sbjct 323 GLQPGGPVRTVRLFQQPTGRCTPQ 346
>gi|31791348|ref|NP_853841.1| MCE-family protein MCE1B [Mycobacterium bovis AF2122/97]
gi|121636082|ref|YP_976305.1| MCE-family protein mce1B [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988555|ref|YP_002643242.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
10 more sequence titles
Length=346
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
L+ + +L+ IQQP+ID+ ELD +L K P A +GRA G YGDF NFYLCD+ +K N
Sbjct 263 LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
G Q GGPVRTVKLF QPTGRCTPQ
Sbjct 323 GFQAGGPVRTVKLFSQPTGRCTPQ 346
>gi|289748646|ref|ZP_06508024.1| MCE-family protein mce1B [Mycobacterium tuberculosis T92]
gi|289689233|gb|EFD56662.1| MCE-family protein mce1B [Mycobacterium tuberculosis T92]
Length=346
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
L+ + +L+ IQQP+ID+ ELD +L K P A +GRA G YGDF NFYLCD+ +K N
Sbjct 263 LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
G Q GGPVRTVKLF QPTGRCTPQ
Sbjct 323 GFQAGGPVRTVKLFSQPTGRCTPQ 346
>gi|289441545|ref|ZP_06431289.1| MCE-family protein mce1B [Mycobacterium tuberculosis T46]
gi|289414464|gb|EFD11704.1| MCE-family protein mce1B [Mycobacterium tuberculosis T46]
Length=346
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
L+ + +L+ IQQP+ID+ ELD +L K P A +GRA G YGDF NFYLCD+ +K N
Sbjct 263 LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
G Q GGPVRTVKLF QPTGRCTPQ
Sbjct 323 GFQAGGPVRTVKLFSQPTGRCTPQ 346
>gi|15607311|ref|NP_214684.1| MCE-family protein MCE1B [Mycobacterium tuberculosis H37Rv]
gi|15839548|ref|NP_334585.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|148659934|ref|YP_001281457.1| MCE-family protein Mce1B [Mycobacterium tuberculosis H37Ra]
56 more sequence titles
Length=346
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
L+ + +L+ IQQP+ID+ ELD +L K P A +GRA G YGDF NFYLCD+ +K N
Sbjct 263 LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
G Q GGPVRTVKLF QPTGRCTPQ
Sbjct 323 GFQAGGPVRTVKLFSQPTGRCTPQ 346
>gi|289568069|ref|ZP_06448296.1| MCE-family protein mce1B [Mycobacterium tuberculosis T17]
gi|289541822|gb|EFD45471.1| MCE-family protein mce1B [Mycobacterium tuberculosis T17]
Length=332
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
L+ + +L+ IQQP+ID+ ELD +L K P A +GRA G YGDF NFYLCD+ +K N
Sbjct 249 LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN 308
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
G Q GGPVRTVKLF QPTGRCTPQ
Sbjct 309 GFQAGGPVRTVKLFSQPTGRCTPQ 332
>gi|294994645|ref|ZP_06800336.1| MCE-family protein mce1B [Mycobacterium tuberculosis 210]
Length=116
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/84 (62%), Positives = 62/84 (74%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
L+ + +L+ IQQP+ID+ ELD +L K P A +GRA G YGDF NFYLCD+ +K N
Sbjct 33 LVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN 92
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
G Q GGPVRTVKLF QPTGRCTPQ
Sbjct 93 GFQAGGPVRTVKLFSQPTGRCTPQ 116
>gi|340625207|ref|YP_004743659.1| MCE-family protein MCE1B [Mycobacterium canettii CIPT 140010059]
gi|340003397|emb|CCC42517.1| MCE-family protein MCE1B [Mycobacterium canettii CIPT 140010059]
Length=346
Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/84 (61%), Positives = 62/84 (74%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
L+ + +L+ IQQP+ID+ EL+ +L K P A +GRA G YGDF NFYLCD+ +K N
Sbjct 263 LVRKTISYLDAIQQPVIDQRVELNDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
G Q GGPVRTVKLF QPTGRCTPQ
Sbjct 323 GFQAGGPVRTVKLFSQPTGRCTPQ 346
>gi|296165086|ref|ZP_06847639.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899579|gb|EFG79032.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=346
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/84 (56%), Positives = 66/84 (79%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LLH + +L+ +QQPL+D+ +L ++ K P A +IGR+ G+YGD+ NFYLCD+S++ N
Sbjct 263 LLHKAINYLQALQQPLVDQRDQLGDLIHKTPTALNLIGRSIGLYGDWVNFYLCDLSIRWN 322
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQ GGPVRTV+++ QPTGRCTPQ
Sbjct 323 GLQAGGPVRTVRIWQQPTGRCTPQ 346
>gi|296163929|ref|ZP_06846565.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900710|gb|EFG80080.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=347
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 49/84 (59%), Positives = 63/84 (75%), Gaps = 0/84 (0%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
LL + G+++ QPLID L +D VL P + + + GG+YGDFFNFY CD++LKV+
Sbjct 264 LLQKAVGYVQNTLQPLIDRLDYVDGVLRDAPQSAKRVAGIGGLYGDFFNFYACDVTLKVD 323
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
GLQPGGPVRTVKL+ QPTGRCTP+
Sbjct 324 GLQPGGPVRTVKLWSQPTGRCTPK 347
>gi|333988763|ref|YP_004521377.1| MCE-family protein Mce1B [Mycobacterium sp. JDM601]
gi|333484731|gb|AEF34123.1| MCE-family protein Mce1B [Mycobacterium sp. JDM601]
Length=342
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/83 (56%), Positives = 64/83 (78%), Gaps = 4/83 (4%)
Query 2 LHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNG 61
LHS F + G + P D +A+++ +L ++P A ++IGR G +YGDFFNFY+CD ++K+ G
Sbjct 264 LHSIF-PVAGPEPP--DRMADVEGLLERIPQALKLIGRTG-VYGDFFNFYICDATIKLPG 319
Query 62 LQPGGPVRTVKLFGQPTGRCTPQ 84
LQPGGPVR V+L+ QPTGRCTPQ
Sbjct 320 LQPGGPVRNVRLWQQPTGRCTPQ 342
>gi|120405351|ref|YP_955180.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958169|gb|ABM15174.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length=342
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/62 (60%), Positives = 45/62 (73%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
+D +L LPDAYR++GR G IYGDFF FYLCD+ LKVNG GG VK+ GQ +GRC
Sbjct 284 VDDLLATLPDAYRVLGRQG-IYGDFFAFYLCDLVLKVNG--KGGQPVYVKVAGQDSGRCA 340
Query 83 PQ 84
P+
Sbjct 341 PR 342
>gi|126436741|ref|YP_001072432.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236541|gb|ABN99941.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length=342
Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/62 (59%), Positives = 44/62 (71%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
+D++L LPD YRI+GR G +YGDFF FYLCD LKVNG GG +K+ GQ TGRC
Sbjct 284 VDNLLNTLPDTYRILGREG-LYGDFFGFYLCDAILKVNG--KGGQPVFIKVAGQDTGRCA 340
Query 83 PQ 84
P+
Sbjct 341 PR 342
>gi|240170714|ref|ZP_04749373.1| virulence factor Mce family protein [Mycobacterium kansasii ATCC
12478]
Length=342
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (46%), Positives = 55/84 (66%), Gaps = 7/84 (8%)
Query 1 LLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVN 60
++H S E I ++ + D +L LPDAY+++ R G +YGDFF+FY+CD+ LK+N
Sbjct 266 IIHQS----ERIADVILADRDYFDDLLNTLPDAYQMLNRQG-LYGDFFSFYMCDLLLKLN 320
Query 61 GLQPGGPVRTVKLFGQPTGRCTPQ 84
G GG VK+ GQP+GRCTP+
Sbjct 321 G--KGGQPIYVKMIGQPSGRCTPR 342
>gi|126436759|ref|YP_001072450.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236559|gb|ABN99959.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length=342
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/69 (54%), Positives = 48/69 (70%), Gaps = 3/69 (4%)
Query 16 LIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFG 75
++ + A +D +L LPDAY+ + R G +YGDFF+FYLCD+ +KVNG GG VKL G
Sbjct 277 VVADHAYVDDLLNTLPDAYQQLNRQG-MYGDFFSFYLCDLIVKVNG--KGGQPVFVKLAG 333
Query 76 QPTGRCTPQ 84
Q TGRC PQ
Sbjct 334 QSTGRCAPQ 342
>gi|183984023|ref|YP_001852314.1| MCE-family protein Mce3B_1 [Mycobacterium marinum M]
gi|183177349|gb|ACC42459.1| MCE-family protein Mce3B_1 [Mycobacterium marinum M]
Length=343
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/61 (60%), Positives = 47/61 (78%), Gaps = 3/61 (4%)
Query 24 DHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTP 83
D+++ LPDAY+ + R G IYGDFF+FYLCD+ LK+NG + G PV VK+ GQPTGRC P
Sbjct 286 DNLINTLPDAYQALSRQG-IYGDFFSFYLCDVVLKLNG-RGGQPVY-VKVAGQPTGRCAP 342
Query 84 Q 84
+
Sbjct 343 R 343
>gi|118619128|ref|YP_907460.1| MCE-family protein Mce3B_1 [Mycobacterium ulcerans Agy99]
gi|118571238|gb|ABL05989.1| MCE-family protein Mce3B_1 [Mycobacterium ulcerans Agy99]
Length=343
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/61 (60%), Positives = 47/61 (78%), Gaps = 3/61 (4%)
Query 24 DHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCTP 83
D+++ LPDAY+ + R G IYGDFF+FYLCD+ LK+NG + G PV VK+ GQPTGRC P
Sbjct 286 DNLINTLPDAYQALSRQG-IYGDFFSFYLCDVVLKLNG-RGGQPVY-VKVAGQPTGRCAP 342
Query 84 Q 84
+
Sbjct 343 R 343
>gi|120404935|ref|YP_954764.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957753|gb|ABM14758.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length=342
Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/62 (55%), Positives = 45/62 (73%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
LD++L LPD YR +GR G +YGDFF+FYLC++ LK+NG GG VK+ GQ +GRC
Sbjct 284 LDNLLNTLPDKYRALGRQG-MYGDFFSFYLCELVLKLNG--KGGQPVYVKIAGQDSGRCA 340
Query 83 PQ 84
P+
Sbjct 341 PK 342
>gi|254820122|ref|ZP_05225123.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length=342
Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/62 (55%), Positives = 44/62 (71%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
D +L LPDAY+ + R G +YGD+F+FYLCD+ LKVNG GG +KL GQ +GRCT
Sbjct 284 FDDLLNTLPDAYQALDRQG-LYGDYFSFYLCDLLLKVNG--KGGQPVYIKLAGQSSGRCT 340
Query 83 PQ 84
P+
Sbjct 341 PK 342
>gi|118469807|ref|YP_884760.1| virulence factor Mce family protein [Mycobacterium smegmatis
str. MC2 155]
gi|118171094|gb|ABK71990.1| virulence factor Mce family protein [Mycobacterium smegmatis
str. MC2 155]
Length=342
Score = 70.9 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/62 (55%), Positives = 44/62 (71%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
LD++L LPD YR++GR +YGD+F+FYLCD+ LK+NG GG VKL Q TGRC
Sbjct 284 LDNILNTLPDKYRVLGRQA-MYGDYFSFYLCDLILKLNG--KGGQPVYVKLAEQVTGRCA 340
Query 83 PQ 84
P+
Sbjct 341 PK 342
>gi|315443154|ref|YP_004076033.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261457|gb|ADT98198.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length=343
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/62 (55%), Positives = 45/62 (73%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
D+++ LPDAY+++ R G IYGDFF+FYLCDI LK+NG GG VK+ GQ +GRC
Sbjct 285 FDNLINTLPDAYQVLARQG-IYGDFFSFYLCDIVLKLNG--KGGQPVYVKVAGQSSGRCA 341
Query 83 PQ 84
P+
Sbjct 342 PR 343
>gi|120405555|ref|YP_955384.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958373|gb|ABM15378.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length=346
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/62 (59%), Positives = 43/62 (70%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
D+ L LPDAY+ + R G IYGDFF+FYLCDI LK+NG GG VK+ GQ TGRC
Sbjct 288 FDNFLNTLPDAYQALARQG-IYGDFFSFYLCDIVLKLNG--KGGQPVYVKVAGQSTGRCA 344
Query 83 PQ 84
P+
Sbjct 345 PR 346
>gi|145222690|ref|YP_001133368.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215176|gb|ABP44580.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length=343
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/62 (55%), Positives = 45/62 (73%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
D+++ LPDAY+++ R G IYGDFF+FYLCDI LK+NG GG VK+ GQ +GRC
Sbjct 285 FDNLINTLPDAYQVLARQG-IYGDFFSFYLCDIVLKLNG--KGGQPVYVKVAGQSSGRCA 341
Query 83 PQ 84
P+
Sbjct 342 PR 343
>gi|226306855|ref|YP_002766815.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226185972|dbj|BAH34076.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length=340
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/80 (47%), Positives = 50/80 (63%), Gaps = 3/80 (3%)
Query 5 SFGHLEGIQQPLIDELAELDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQP 64
+ L+ PLI++ +ELD +L +P Y+ + R G YG FFNFYLC I+LKV+G
Sbjct 264 NLSKLDASLNPLIEQQSELDRILASMPSNYKQLIRVGS-YGSFFNFYLCGIALKVDGAD- 321
Query 65 GGPVRTVKLFGQPTGRCTPQ 84
G P+ TV L Q TGRC P+
Sbjct 322 GTPL-TVDLVDQTTGRCAPR 340
>gi|120401389|ref|YP_951218.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954207|gb|ABM11212.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length=342
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/62 (57%), Positives = 46/62 (75%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
LD++L LPD Y+ +GR G +YGDFF+FYLC+I LK+NG GG VK+ GQ +GRCT
Sbjct 284 LDNLLNTLPDRYQALGRQG-MYGDFFSFYLCEIVLKLNG--KGGQPVYVKVAGQDSGRCT 340
Query 83 PQ 84
P+
Sbjct 341 PR 342
>gi|183982887|ref|YP_001851178.1| MCE-family protein Mce3B [Mycobacterium marinum M]
gi|183176213|gb|ACC41323.1| MCE-family protein Mce3B [Mycobacterium marinum M]
Length=342
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/62 (57%), Positives = 44/62 (71%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
LD++L LPD Y+ + R G +YGDFF FYLCD+ LKVNG GG +K+ GQ TGRCT
Sbjct 284 LDNLLNTLPDRYQALVRQG-MYGDFFAFYLCDVVLKVNG--KGGQPVYIKVAGQATGRCT 340
Query 83 PQ 84
P+
Sbjct 341 PK 342
>gi|118618292|ref|YP_906624.1| MCE-family protein Mce3B [Mycobacterium ulcerans Agy99]
gi|118570402|gb|ABL05153.1| MCE-family protein Mce3B [Mycobacterium ulcerans Agy99]
Length=342
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/62 (57%), Positives = 44/62 (71%), Gaps = 3/62 (4%)
Query 23 LDHVLGKLPDAYRIIGRAGGIYGDFFNFYLCDISLKVNGLQPGGPVRTVKLFGQPTGRCT 82
LD++L LPD Y+ + R G +YGDFF FYLCD+ LKVNG GG +K+ GQ TGRCT
Sbjct 284 LDNLLNTLPDRYQALVRQG-MYGDFFAFYLCDVVLKVNG--KGGQPVYIKVAGQATGRCT 340
Query 83 PQ 84
P+
Sbjct 341 PK 342
Lambda K H
0.324 0.149 0.468
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131923386480
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40