BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0597c Length=411 Score E Sequences producing significant alignments: (Bits) Value gi|15607737|ref|NP_215111.1| hypothetical protein Rv0597c [Mycob... 809 0.0 gi|306796346|ref|ZP_07434648.1| hypothetical protein TMFG_03263 ... 808 0.0 gi|340625627|ref|YP_004744079.1| hypothetical protein MCAN_06031... 808 0.0 gi|289573197|ref|ZP_06453424.1| conserved hypothetical protein [... 808 0.0 gi|336116198|ref|YP_004570964.1| hypothetical protein MLP_05470 ... 363 4e-98 gi|340628276|ref|YP_004746728.1| hypothetical protein MCAN_33171... 358 7e-97 gi|336177068|ref|YP_004582443.1| hypothetical protein FsymDg_101... 354 2e-95 gi|54024733|ref|YP_118975.1| hypothetical protein nfa27640 [Noca... 340 4e-91 gi|312195031|ref|YP_004015092.1| hypothetical protein FraEuI1c_1... 337 2e-90 gi|336116428|ref|YP_004571194.1| hypothetical protein MLP_07770 ... 335 9e-90 gi|297157562|gb|ADI07274.1| hypothetical protein SBI_04153 [Stre... 323 3e-86 gi|158317994|ref|YP_001510502.1| hypothetical protein Franean1_6... 321 2e-85 gi|336177393|ref|YP_004582768.1| hypothetical protein FsymDg_137... 318 8e-85 gi|330467336|ref|YP_004405079.1| hypothetical protein VAB18032_1... 317 2e-84 gi|320450333|ref|YP_004202429.1| AAA+ super family ATPase [Therm... 317 2e-84 gi|238061727|ref|ZP_04606436.1| hypothetical protein MCAG_02693 ... 316 4e-84 gi|304311176|ref|YP_003810774.1| Predicted ATPase [gamma proteob... 315 9e-84 gi|299133054|ref|ZP_07026249.1| conserved hypothetical protein [... 299 7e-79 gi|209544898|ref|YP_002277127.1| hypothetical protein Gdia_2779 ... 297 2e-78 gi|15842758|ref|NP_337795.1| hypothetical protein MT3270 [Mycoba... 297 3e-78 gi|15610315|ref|NP_217695.1| hypothetical protein Rv3179 [Mycoba... 297 3e-78 gi|298526654|ref|ZP_07014063.1| conserved hypothetical protein [... 296 3e-78 gi|254233792|ref|ZP_04927117.1| conserved hypothetical protein [... 296 4e-78 gi|148824374|ref|YP_001289128.1| hypothetical protein TBFG_13201... 295 1e-77 gi|254552272|ref|ZP_05142719.1| hypothetical protein Mtube_17778... 295 1e-77 gi|256830086|ref|YP_003158814.1| ATPase AAA [Desulfomicrobium ba... 294 2e-77 gi|336117254|ref|YP_004572021.1| hypothetical protein MLP_16040 ... 294 2e-77 gi|153012018|ref|YP_001373230.1| hypothetical protein Oant_4815 ... 292 8e-77 gi|119357028|ref|YP_911672.1| AAA family ATPase [Chlorobium phae... 291 1e-76 gi|110632900|ref|YP_673108.1| hypothetical protein Meso_0540 [Me... 289 6e-76 gi|46255211|ref|YP_006123.1| hypothetical protein TT_P0140 [Ther... 288 1e-75 gi|298529035|ref|ZP_07016438.1| AAA family ATPase [Desulfonatron... 288 1e-75 gi|167621599|ref|YP_001672107.1| hypothetical protein Caul_5329 ... 287 2e-75 gi|323138759|ref|ZP_08073824.1| hypothetical protein Met49242DRA... 286 3e-75 gi|284045327|ref|YP_003395667.1| ATPase AAA [Conexibacter woesei... 286 6e-75 gi|289166273|ref|YP_003456411.1| hypothetical protein LLO_2944 [... 280 3e-73 gi|56459638|ref|YP_154919.1| ATPase [Idiomarina loihiensis L2TR]... 280 3e-73 gi|85707504|ref|ZP_01038581.1| predicted ATPase (AAA+ superfamil... 278 1e-72 gi|270158952|ref|ZP_06187608.1| putative ATPase [Legionella long... 277 2e-72 gi|336118315|ref|YP_004573084.1| hypothetical protein MLP_26670 ... 277 2e-72 gi|158522965|ref|YP_001530835.1| AAA family ATPase [Desulfococcu... 274 2e-71 gi|119356615|ref|YP_911259.1| AAA family ATPase [Chlorobium phae... 272 8e-71 gi|209547117|ref|YP_002279035.1| hypothetical protein Rleg2_5079... 272 8e-71 gi|120537108|ref|YP_957165.1| AAA family ATPase [Marinobacter aq... 271 1e-70 gi|307947366|ref|ZP_07662700.1| AAA family ATPase [Roseibium sp.... 271 1e-70 gi|251771011|gb|EES51595.1| ATPase (AAA+ superfamily)-like prote... 271 2e-70 gi|194335302|ref|YP_002017096.1| ATPase [Pelodictyon phaeoclathr... 269 6e-70 gi|116751278|ref|YP_847965.1| AAA family ATPase [Syntrophobacter... 269 7e-70 gi|344199315|ref|YP_004783641.1| AAA family ATPase [Acidithiobac... 268 2e-69 gi|111222751|ref|YP_713545.1| hypothetical protein FRAAL3336 [Fr... 265 8e-69 >gi|15607737|ref|NP_215111.1| hypothetical protein Rv0597c [Mycobacterium tuberculosis H37Rv] gi|15840000|ref|NP_335037.1| hypothetical protein MT0627 [Mycobacterium tuberculosis CDC1551] gi|31791779|ref|NP_854272.1| hypothetical protein Mb0613c [Mycobacterium bovis AF2122/97] 72 more sequence titles Length=411 Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/411 (100%), Positives = 411/411 (100%), Gaps = 0/411 (0%) Query 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR Sbjct 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 Query 61 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL Sbjct 61 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA 180 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA Sbjct 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA 180 Query 181 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI 240 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI Sbjct 181 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI 240 Query 241 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP 300 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP Sbjct 241 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP 300 Query 301 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS 360 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS Sbjct 301 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS 360 Query 361 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG Sbjct 361 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 >gi|306796346|ref|ZP_07434648.1| hypothetical protein TMFG_03263 [Mycobacterium tuberculosis SUMu006] gi|308343197|gb|EFP32048.1| hypothetical protein TMFG_03263 [Mycobacterium tuberculosis SUMu006] Length=411 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/411 (99%), Positives = 411/411 (100%), Gaps = 0/411 (0%) Query 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR Sbjct 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 Query 61 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 DDPRAFVSRPVDTLVI+EAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL Sbjct 61 DDPRAFVSRPVDTLVINEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA 180 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA Sbjct 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA 180 Query 181 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI 240 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI Sbjct 181 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI 240 Query 241 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP 300 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP Sbjct 241 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP 300 Query 301 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS 360 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS Sbjct 301 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS 360 Query 361 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG Sbjct 361 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 >gi|340625627|ref|YP_004744079.1| hypothetical protein MCAN_06031 [Mycobacterium canettii CIPT 140010059] gi|340003817|emb|CCC42943.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=411 Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/411 (99%), Positives = 410/411 (99%), Gaps = 0/411 (0%) Query 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR Sbjct 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 Query 61 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL Sbjct 61 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA 180 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA Sbjct 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA 180 Query 181 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI 240 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI Sbjct 181 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI 240 Query 241 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP 300 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP Sbjct 241 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP 300 Query 301 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS 360 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS Sbjct 301 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS 360 Query 361 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW G Sbjct 361 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWTG 411 >gi|289573197|ref|ZP_06453424.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289537628|gb|EFD42206.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=411 Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/411 (99%), Positives = 410/411 (99%), Gaps = 0/411 (0%) Query 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR Sbjct 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 Query 61 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL Sbjct 61 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA 180 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA Sbjct 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA 180 Query 181 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI 240 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI Sbjct 181 RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI 240 Query 241 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP 300 PARTT GYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP Sbjct 241 PARTTVGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP 300 Query 301 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS 360 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS Sbjct 301 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS 360 Query 361 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG Sbjct 361 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 >gi|336116198|ref|YP_004570964.1| hypothetical protein MLP_05470 [Microlunatus phosphovorus NM-1] gi|334683976|dbj|BAK33561.1| hypothetical protein MLP_05470 [Microlunatus phosphovorus NM-1] Length=415 Score = 363 bits (931), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 204/413 (50%), Positives = 262/413 (64%), Gaps = 4/413 (0%) Query 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 M V R + P VL AL DT +VVV GARQVGKTTLV + + S DD AA Sbjct 1 MSPVARHVKPRVLEALGDTRIVVVQGARQVGKTTLVREIVGAKGGRLESFDDRLTARAAS 60 Query 61 DDPRAFVSRPVDTLV-IDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADA 119 +DP F+S D L+ IDE Q P L A+K VDRD RPGRFL+TGSA LL P + D+ Sbjct 61 EDPIGFLSAAPDRLLAIDEVQRVPELILALKYVVDRDTRPGRFLVTGSANLLKLPAIEDS 120 Query 120 LVGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIV 179 L GR E IEL FSQGE AG A+ FVD L T R H SD+ R D ++R GG+P+ + Sbjct 121 LAGRTESIELHGFSQGEIAGHAERFVDRLLTGERFADHRSDLHRRDYLERAVAGGYPEAL 180 Query 180 ARSPSRRR-AWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDL 238 R+P RRR W DNY+ + ++S ++R+AE+P +LR+ AAR EL V+ +A + Sbjct 181 TRTPGRRRDLWLDNYVNGIVRREADDVSNLQRIAELPLILRVLAARNSGELIVADVARET 240 Query 239 SIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVT--GAT 296 IPART YL LL+ +L VPAW+TNL+++V+ RPK+ + DSGLA L+ V+ GA+ Sbjct 241 EIPARTLTPYLELLQTLYLTQHVPAWATNLAKRVVSRPKVSLLDSGLAARLINVSAQGAS 300 Query 297 LDRPGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEV 356 D G LLE FVA EIR+QLTWS E + HFR++ EVDLVLE PDGRV GIEV Sbjct 301 PDGNPHVAGGLLEGFVAGEIRRQLTWSEETARIGHFREQSAGEVDLVLETPDGRVAGIEV 360 Query 357 KATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 K+T+ P+A+D +GL YL +RL RF GV+L A FG +AA+P+ LW Sbjct 361 KSTAAPKAKDAKGLAYLRDRLGKRFVAGVILHTGTTAGAFGDRIAAVPMDVLW 413 >gi|340628276|ref|YP_004746728.1| hypothetical protein MCAN_33171 [Mycobacterium canettii CIPT 140010059] gi|340006466|emb|CCC45648.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=422 Score = 358 bits (920), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 195/411 (48%), Positives = 265/411 (65%), Gaps = 4/411 (0%) Query 4 VERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDP 63 + R + P V AL DT +VVV GARQVGK+TL A + +V+LDD R A DP Sbjct 9 IARNLLPRVAEALIDTRIVVVQGARQVGKSTLAAEITGRLGGRLVTLDDDLTRTTAATDP 68 Query 64 RAFVSR-PVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVG 122 +FV + P L IDE Q P L A+KA VD + RPGR+LLTGSA LL P D+L G Sbjct 69 YSFVRQFPDGLLTIDEVQRVPELVLALKATVDANHRPGRYLLTGSANLLQLPATEDSLAG 128 Query 123 RVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARS 182 R E +EL+ FSQGE G+ + F+D LF L H SD+ R D + R +GG+P+ V+R Sbjct 129 RAESLELFGFSQGEVEGVTETFIDRLFAGDLFLGHESDLARHDYLARACSGGYPEAVSRK 188 Query 183 PSRRR-AWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIP 241 +RRR AW DNY+ + ++S ++R+A++PR++RL AAR+ +ELN+S+LA D IP Sbjct 189 STRRRNAWLDNYVDRVVKRDAADVSNLQRIADLPRLIRLLAARSASELNLSSLATDAEIP 248 Query 242 ARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGV--TGATLDR 299 RT YL LLE +LI R+PAWSTNLS++V+ RPK+++ DSGLA L+ V TGA Sbjct 249 VRTLPPYLDLLETLYLIDRIPAWSTNLSKRVVDRPKILLLDSGLAARLVNVSPTGAGPHA 308 Query 300 PGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKAT 359 G ++ETFV E+R+QL WS + P L+H+RDR GAEVDL+LE DG + IE+K+ Sbjct 309 NPNAAGAIIETFVIAELRRQLGWSQQAPRLFHYRDRDGAEVDLILETADGLIAAIEIKSA 368 Query 360 STPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 +T R D R + L +++ RF GV+L P+A PFG LAA+P+ LW+ Sbjct 369 ATLRGRDTRSISRLRDKVGARFAGGVILHTGPQAQPFGDRLAAVPIDILWS 419 >gi|336177068|ref|YP_004582443.1| hypothetical protein FsymDg_1018 [Frankia symbiont of Datisca glomerata] gi|334858048|gb|AEH08522.1| hypothetical protein FsymDg_1018 [Frankia symbiont of Datisca glomerata] Length=401 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 200/399 (51%), Positives = 251/399 (63%), Gaps = 4/399 (1%) Query 13 LAALADTPVVVVNGARQVGKTTLVARLDYPGSSE--VVSLDDVANRDAARDDPRAFVSRP 70 + AL DT VV +NGARQ GK+TL ARL ++ + LDD A AA DDP F+ Sbjct 1 MEALGDTRVVAINGARQAGKSTL-ARLAASATANPLIRLLDDPATLRAAHDDPTGFIDHD 59 Query 71 VDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELW 130 D LV+DE QL P LFR IK VD D RPGRFLL GSA++L+ D+ DAL GR+E IELW Sbjct 60 -DLLVVDEVQLAPELFRVIKVAVDTDPRPGRFLLIGSAQILALRDLPDALPGRIETIELW 118 Query 131 PFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRRAWF 190 PFSQGE G D FVDA FT L S +RR D ++RI GG+P+ V RSP RR A+F Sbjct 119 PFSQGEIDGTPDRFVDAAFTHGPGLSRTSPLRRRDYLERIVRGGYPEAVRRSPRRRTAFF 178 Query 191 DNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLA 250 D+YL+T + E+S I+R E+ ++L L A+R+G L ALA+ IP T YL Sbjct 179 DSYLSTLIARDVTELSAIQRRGELHQLLALLASRSGGLLVPGALASQSGIPRTTLNRYLD 238 Query 251 LLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLET 310 LL A FLI VPAWST + + + PKL DSG+ACHLLG A L P GP++E Sbjct 239 LLSAVFLIKLVPAWSTGHTHRAVGTPKLAYVDSGIACHLLGQDAARLGEPDGTAGPMVEN 298 Query 311 FVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGL 370 FV E+ +QL+W+ + L+H+R + EVD +LE PDGRV GIEVKA +T R EDL GL Sbjct 299 FVLTELARQLSWNEQSARLYHYRTKDKVEVDALLETPDGRVVGIEVKAGATVRGEDLAGL 358 Query 371 RYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 R+LA L RF G +L + PFG L+ALP+ LW Sbjct 359 RHLANLLGPRFVAGYVLYTGQQTLPFGDRLSALPLDALW 397 >gi|54024733|ref|YP_118975.1| hypothetical protein nfa27640 [Nocardia farcinica IFM 10152] gi|54016241|dbj|BAD57611.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=441 Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 207/415 (50%), Positives = 258/415 (63%), Gaps = 13/415 (3%) Query 1 MGV--VERAIAPSVLAALADTPVVVVNGARQVGKTTLVARL--DYPGSSEVVSLDDVANR 56 MGV + R A V AL DT VV+VNGARQ GK+TL D+P + LDD R Sbjct 24 MGVDYLPRHAAQLVKEALEDTRVVIVNGARQTGKSTLAEHCVKDHPNVVKRY-LDDPRTR 82 Query 57 DAARDDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDM 116 DAA DDP AF+ P ++IDE Q P L+ AIK VDRD RPGRFLLTGSARLL + Sbjct 83 DAAADDPVAFLDAP-GLMLIDEVQRVPDLWLAIKHTVDRDPRPGRFLLTGSARLLGLSSL 141 Query 117 ADALVGRVEIIELWPFSQGERAGIADGFVDALFTAPREL-IHGSDMRRADLVDRIATGGF 175 DA+ GR E IEL+P SQGE +G DGF+DA FT R L I S +RR D + A GG+ Sbjct 142 PDAMPGRSETIELFPLSQGEISGAPDGFIDAAFTYGRHLEIPDSGLRRRDYLALAARGGY 201 Query 176 PDIVARSPSRRRAWF-DNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSAL 234 P+ V R+ RRRA F +YL IR+++ I+R A+M R++ AA++G LN L Sbjct 202 PESVHRTSDRRRAQFARSYLDDIMTRDIRQVADIQRAADMRRLIVTLAAQSGGLLNYDRL 261 Query 235 ANDLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTG 294 A+ LS+PA T Y+A+LE +L+ VPAWS N + + + PK+V +DSGLA HLL G Sbjct 262 ASALSMPASTIRNYVAILELIYLVRLVPAWSANATMRAVATPKVVFTDSGLAGHLLA--G 319 Query 295 ATLDRPGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGI 354 T D G LLETFV E+ +QLTWS L H+RDR G EVD +LE+ G+V I Sbjct 320 ITNDAT---TGGLLETFVIGELTRQLTWSHSLAQLHHYRDRDGHEVDALLENNAGQVVAI 376 Query 355 EVKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 EVKA T R+ED RGLR+L RL DRF G +L + PFG LAALP+S LW Sbjct 377 EVKAAETVRSEDFRGLRHLQRRLGDRFHAGFVLYCGDQQLPFGDQLAALPISALW 431 >gi|312195031|ref|YP_004015092.1| hypothetical protein FraEuI1c_1149 [Frankia sp. EuI1c] gi|311226367|gb|ADP79222.1| hypothetical protein FraEuI1c_1149 [Frankia sp. EuI1c] Length=424 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 198/401 (50%), Positives = 257/401 (65%), Gaps = 5/401 (1%) Query 12 VLAALADTPVVVVNGARQVGKTTLVARL--DYPGSSEVVSLDDVANRDAARDDPRAFVSR 69 V AALADT VVVVNGARQVGK+TL ARL D G + LDD A R AA DP FV+ Sbjct 20 VSAALADTRVVVVNGARQVGKSTL-ARLAVDAHGEARTYYLDDDAVRAAALADPAGFVNA 78 Query 70 PVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIEL 129 L+IDE Q P L AIK++VDRD RPGR+LLTGSARL + D L GR E +EL Sbjct 79 D-GLLMIDEIQRAPDLLLAIKSKVDRDPRPGRYLLTGSARLWGMKGIPDILPGRSETVEL 137 Query 130 WPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRRA- 188 WP +QGE G D FVDA+F L+ + R D V+R GG+P+ V R RRRA Sbjct 138 WPLAQGEIDGGPDAFVDAVFARDEPLLAPGALDRNDYVERALRGGYPEAVRREDLRRRAR 197 Query 189 WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGY 248 +F++Y++ IR+IS IER AE+ ++++ AA G L + L+NDL++PA T + Sbjct 198 FFESYISDLIGRDIRQISEIERTAELRQLVQALAATAGGLLVPNRLSNDLAVPATTVRRH 257 Query 249 LALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLL 308 LA LE ++++ R+PAWS NL+ + + PK++ DSGLA HL G++ P +G L+ Sbjct 258 LAALELSYVVQRIPAWSNNLTTRAVATPKIIFVDSGLAGHLTGMSPRRASHPTANVGALI 317 Query 309 ETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLR 368 E FV E+ +QLTW+ E SL+H+RDR G EVD VLE G + G+EVKA T R ED R Sbjct 318 ENFVLGELARQLTWAQEPVSLFHYRDRDGNEVDAVLERASGEIVGVEVKAAETVRTEDFR 377 Query 369 GLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 GLR LA+++ DRF G +L A PE PFGP L A+P+S LW Sbjct 378 GLRRLADQIGDRFHAGYVLYAGPEVLPFGPRLRAVPISALW 418 >gi|336116428|ref|YP_004571194.1| hypothetical protein MLP_07770 [Microlunatus phosphovorus NM-1] gi|334684206|dbj|BAK33791.1| hypothetical protein MLP_07770 [Microlunatus phosphovorus NM-1] Length=419 Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 191/396 (49%), Positives = 243/396 (62%), Gaps = 4/396 (1%) Query 15 ALADTPVVVVNGARQVGKTTLVARLDYPGSSEV-VSLDDVANRDAARDDPRAFVSRPVDT 73 ALADT VV++NGARQ GK+TL A+L G+ V +LDD R AA DP FV+ Sbjct 24 ALADTRVVLINGARQSGKSTLAAQL---GADAVWRTLDDAPTRAAALSDPAGFVAPTGQM 80 Query 74 LVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFS 133 +IDE Q P L AIKA VD++ PG+FLLTGSAR+L+ + DAL GR E IELWP S Sbjct 81 QIIDEVQRAPELLLAIKAVVDQNADPGQFLLTGSARVLAMRGVTDALPGRTETIELWPLS 140 Query 134 QGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRRAWFDNY 193 QGE ADGFVDA+FT + H SD R ++R+ GGFP + R RR + D+Y Sbjct 141 QGEIEHEADGFVDAIFTLGADFRHESDESRTAYIERLVRGGFPGAIGRPAPRRARFLDSY 200 Query 194 LTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLALLE 253 + + ++S I+R EM ++ + A R+G L +LA + +P T A YL LLE Sbjct 201 VGDLVNRDVVQLSEIQRGPEMHTLIEVLAGRSGQTLAAGSLATKIGLPRDTVARYLRLLE 260 Query 254 AAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFVA 313 FLI R+PAW+ N++ + PKL DSG+A +LL A+L RP PLG L+E FVA Sbjct 261 EVFLIKRIPAWARNINTRATAAPKLAFVDSGIAANLLDQDAASLRRPDAPLGALMEGFVA 320 Query 314 NEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRYL 373 EI +QLTWS R L H+R R G EVDLVLE RV IEVKA ST R ED RG+R+L Sbjct 321 MEIARQLTWSHTRARLSHYRTRDGVEVDLVLEDRRRRVIAIEVKAASTVRTEDFRGIRHL 380 Query 374 AERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 AERL D G++L + PFG L A+P+S LW Sbjct 381 AERLGDDLVVGIVLYTGAQTLPFGNRLRAIPISALW 416 >gi|297157562|gb|ADI07274.1| hypothetical protein SBI_04153 [Streptomyces bingchenggensis BCW-1] Length=393 Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 187/391 (48%), Positives = 239/391 (62%), Gaps = 4/391 (1%) Query 21 VVVVNGARQVGKTTLVARLDYPGSSEVVS--LDDVANRDAARDDPRAFVSRPVDTLVIDE 78 +V+VNGARQ GK+TL RL + V LDD A AA DDP FV ++IDE Sbjct 1 MVLVNGARQAGKSTLT-RLTAARRRDPVLRLLDDAATLRAAMDDPTGFVEHD-SMMLIDE 58 Query 79 AQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQGERA 138 QL P L RAIK VD D PGRFLLTGS+R+L+ + DAL GR+E+IELWPFSQGE + Sbjct 59 IQLAPELLRAIKVAVDLDPTPGRFLLTGSSRILAMRTLPDALPGRMEVIELWPFSQGEIS 118 Query 139 GIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRRAWFDNYLTTAT 198 G D FVDA FT L S +R+ D +DR GGFP+ V R+P RR A+F+ YL+T Sbjct 119 GGPDRFVDAAFTHGPGLSCTSALRKRDYLDRAVVGGFPEAVKRTPRRRTAFFNAYLSTLV 178 Query 199 QSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLALLEAAFLI 258 + + E++ IER E+ ++L L A RTG L +ALA IP T YL LL + FLI Sbjct 179 ERDVLELASIERHGEILKLLGLLAGRTGGLLVPAALATASGIPRTTLVRYLELLTSVFLI 238 Query 259 HRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFVANEIRK 318 +PAW++ L+ + + KL D+G+ACHL G A L P G +LE FV E+ + Sbjct 239 KTIPAWTSGLTGRTVGTGKLAFVDTGIACHLTGQDAARLAEPDGAAGAMLENFVVMELAR 298 Query 319 QLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRYLAERLD 378 QLTWS ++ L+H+R + EVD V+E P G V GIEVKA +T R EDL GLR LA L Sbjct 299 QLTWSEQQGRLFHYRTKDKVEVDAVIETPRGDVIGIEVKAGATVRTEDLSGLRNLANLLG 358 Query 379 DRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 DRF G +L + PFG + ALP+ LW Sbjct 359 DRFVAGYVLYTGQQTLPFGDRIRALPMDALW 389 >gi|158317994|ref|YP_001510502.1| hypothetical protein Franean1_6254 [Frankia sp. EAN1pec] gi|158113399|gb|ABW15596.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length=430 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 195/404 (49%), Positives = 257/404 (64%), Gaps = 15/404 (3%) Query 18 DTPVVVVNGARQVGKTTLVARL--DYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTLV 75 DT VVVVNGARQVGK+TL A+L G+++ LD+ + R AA DP F++ L+ Sbjct 25 DTRVVVVNGARQVGKSTL-AQLTAGQHGNAQAYYLDEESTRAAATADPIGFLNHH-GLLM 82 Query 76 IDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQG 135 IDE Q P L AIK EVDRD+ PGRFLLTGSARL + D L GR E +ELWP +QG Sbjct 83 IDEIQRVPELLLAIKREVDRDQSPGRFLLTGSARLWGLRGIPDTLPGRSETVELWPLAQG 142 Query 136 ERAGIADGFVDALF---------TAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRR 186 E G DGFVDA+F + +L G+ +RR D V R GGFP+ V R+ RR Sbjct 143 EIDGGPDGFVDAVFADDDLGADPSVDLDLASGA-LRRDDYVGRALRGGFPEAVRRADPRR 201 Query 187 RA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTT 245 RA +F++Y++ IR+I+ IER +E+ R+++ AA T + L+NDL + A T Sbjct 202 RARFFESYISDLIARDIRQIAEIERTSELRRLVQALAANTSGLVVPRRLSNDLDVSASTV 261 Query 246 AGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLG 305 A ++ LE +L+ R+PAWS+NL+ + + PKL++ DSGLA HL G+T P P+G Sbjct 262 ARHIEALELVYLVQRIPAWSSNLTTRAVATPKLILVDSGLAGHLTGMTSRRASHPTAPVG 321 Query 306 PLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAE 365 PLLE FV E+ +QLTW+ E +L+H+RDR EVD VLE G V GIEVKA T RAE Sbjct 322 PLLENFVLGELARQLTWADEPVALFHYRDRDRNEVDAVLERASGEVVGIEVKAAETVRAE 381 Query 366 DLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 D RGLR LA+++ DRF+ G +L A E PFGP + A P+STLW Sbjct 382 DFRGLRRLADQIGDRFRAGYVLYAGAEVLPFGPRMRAAPISTLW 425 >gi|336177393|ref|YP_004582768.1| hypothetical protein FsymDg_1375 [Frankia symbiont of Datisca glomerata] gi|334858373|gb|AEH08847.1| hypothetical protein FsymDg_1375 [Frankia symbiont of Datisca glomerata] Length=424 Score = 318 bits (816), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 200/402 (50%), Positives = 250/402 (63%), Gaps = 5/402 (1%) Query 12 VLAALADTPVVVVNGARQVGKTTLVA-RLDYPGSSEVVSLDDVANRDAARDDPRAFVSRP 70 V AAL DT VVVV GARQVGK+TL D + + LDD A R AA DP FV+ Sbjct 19 VSAALGDTRVVVVGGARQVGKSTLAQMAADARADARALYLDDDAVRAAAEYDPTGFVNH- 77 Query 71 VDTLV-IDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIEL 129 D LV IDE Q P L IK EVDR RPGRFLLTGSA+L + D+ D L GR E +EL Sbjct 78 -DGLVMIDEIQRVPQLLLPIKHEVDRHPRPGRFLLTGSAQLWALRDIPDLLPGRSETVEL 136 Query 130 WPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRRAW 189 WP SQGE G DGFVDA+F + SD+RR D V R GGFP+ V R+ +RRRA Sbjct 137 WPLSQGEIDGEPDGFVDAVFADAEPSLARSDLRRTDYVARALRGGFPEAVRRADARRRAR 196 Query 190 FD-NYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGY 248 F +Y++ + IR+IS IER+AE+ +++ AA G L + L+NDL +P T + Sbjct 197 FFDSYISDLIKRDIRQISEIERVAELRGLVQALAATAGGILVPARLSNDLGVPVTTVRRH 256 Query 249 LALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLL 308 LA LE +++ RVPAWS NL+ + +PK++ DSGLA HL G++ P +GPL+ Sbjct 257 LAALELIYIVRRVPAWSKNLTARATAKPKIIFVDSGLAGHLTGMSLRRASHPTAAVGPLI 316 Query 309 ETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLR 368 E FV E+ +QLTWS E SL+H+RDR EVD VLE G + GIEVKA T RA+D R Sbjct 317 ENFVLGELARQLTWSEEPVSLFHYRDRDRHEVDAVLERASGEIVGIEVKAAETVRADDFR 376 Query 369 GLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 GLR LAE+ DRF G +L A E FGP + A P+S LWA Sbjct 377 GLRQLAEQTGDRFHAGYVLYAGGEVLRFGPHMRAAPISALWA 418 >gi|330467336|ref|YP_004405079.1| hypothetical protein VAB18032_16875 [Verrucosispora maris AB-18-032] gi|328810307|gb|AEB44479.1| hypothetical protein VAB18032_16875 [Verrucosispora maris AB-18-032] Length=420 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 183/393 (47%), Positives = 238/393 (61%), Gaps = 2/393 (0%) Query 18 DTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTLVID 77 DT VV+++GARQ GK+TLV + +E LD +R AA DP FV + LVID Sbjct 21 DTRVVLISGARQAGKSTLVRLVAGDRLAERRDLDRAQDRAAAIADPVGFVDSS-ELLVID 79 Query 78 EAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQGER 137 E Q P L AIKA VD D RPGR+LLTGS+RL DAL GR+E +ELWPFSQGE Sbjct 80 EIQRAPELLLAIKAAVDEDPRPGRYLLTGSSRLFGMVAAPDALPGRMETVELWPFSQGEL 139 Query 138 AGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARS-PSRRRAWFDNYLTT 196 G DGF+DA+F +L H SD+ RAD RI GG P+ AR+ P RR+ + D Y+ Sbjct 140 DGALDGFIDAVFALGPDLRHESDVTRADYAARIVRGGLPEATARTDPRRRQRFLDAYVQA 199 Query 197 ATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLALLEAAF 256 +R++S I+ E+ R++RL AAR+ + ++L + L + T YL LE F Sbjct 200 LIDRDVRQLSDIQHKGELRRLVRLLAARSATIIAANSLESALGLSRPTIVRYLQALEEIF 259 Query 257 LIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFVANEI 316 LI R+P WS NL + KL+ DSG+A + +G L RPG P GPLLE+FV +E+ Sbjct 260 LIKRIPGWSRNLGTRATAASKLIFVDSGIAANEIGTDARALLRPGAPFGPLLESFVLSEL 319 Query 317 RKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRYLAER 376 +QLTWS + L H+RD+ EVD VLE+ G+V GIEVKA ST +D RGLR LA+R Sbjct 320 SRQLTWSEQFVDLSHYRDQSRYEVDAVLENRAGQVVGIEVKAASTVGPDDFRGLRRLADR 379 Query 377 LDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 L D F G++L PFG + A+PVS LW Sbjct 380 LGDDFIVGIVLYTGTATLPFGDRIRAMPVSALW 412 >gi|320450333|ref|YP_004202429.1| AAA+ super family ATPase [Thermus scotoductus SA-01] gi|320150502|gb|ADW21880.1| ATPase, AAA+ superfamily [Thermus scotoductus SA-01] Length=409 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 188/404 (47%), Positives = 238/404 (59%), Gaps = 7/404 (1%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R + P +L AL DTPVV + GARQVGK+TLV L Y ++LDD +A+ DP Sbjct 9 RFLTPRLLEALQDTPVVFLAGARQVGKSTLVRSLGY---GRYLTLDDPLVLASAQHDPLG 65 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 F+ LV+DE Q PGL RAIK VD DRRPGRFLLTGSA +L P + LVGR+E Sbjct 66 FLQAQEGPLVLDEVQRAPGLLRAIKLLVDEDRRPGRFLLTGSANVLVLPQASGELVGRME 125 Query 126 IIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSR 185 ++ LWP SQGE G + F+D LF+ PR + L +R+ GGFP+ V R R Sbjct 126 VLTLWPLSQGELEGKEEKFLDLLFS-PR-FPSAGRLEAVSLEERVFRGGFPEAVTRKGRR 183 Query 186 RRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTT 245 R+AWF+ YL + +R++S I RL E+P+VL L A R G+ +N S +A +P T Sbjct 184 RQAWFEAYLKALLERDLRDLSRIHRLLEVPKVLGLLALRLGSPMNQSEVARGAGLPLSTL 243 Query 246 AGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLG 305 YLALLEA FL+ RVPAW+ ++++ PKL DSGLA LL G LD+ G Sbjct 244 RDYLALLEALFLVVRVPAWTPGGEGRLVKAPKLYFVDSGLAASLLRYGGLALDQ-ASSFG 302 Query 306 PLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAE 365 PLLE FV EI K L WS P+L+HFR G EVDLVLE +GRV G+EVKA+ T Sbjct 303 PLLENFVVLEILKGLGWSQVAPNLYHFRTHTGQEVDLVLEW-EGRVVGLEVKASRTLGLR 361 Query 366 DLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 D GL+ L DRF GV+L E L A+P+ LW Sbjct 362 DFSGLKALRSLAKDRFLRGVVLYGGEEILAVERDLLAVPIQALW 405 >gi|238061727|ref|ZP_04606436.1| hypothetical protein MCAG_02693 [Micromonospora sp. ATCC 39149] gi|237883538|gb|EEP72366.1| hypothetical protein MCAG_02693 [Micromonospora sp. ATCC 39149] Length=437 Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 184/393 (47%), Positives = 236/393 (61%), Gaps = 2/393 (0%) Query 18 DTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTLVID 77 DT VV+++GARQ GK+TLV + +E LD +R AA DP FV P + L ID Sbjct 38 DTRVVLISGARQAGKSTLVRIVAGDRLAERRDLDRAQDRAAALADPVGFVDSP-ELLAID 96 Query 78 EAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQGER 137 E Q P L AIKA VD D RPGR+LLTGS+RL DAL GR+E +ELWP SQGE Sbjct 97 EIQGAPELLLAIKAAVDEDPRPGRYLLTGSSRLFGMVAAPDALPGRMETVELWPLSQGEL 156 Query 138 AGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARS-PSRRRAWFDNYLTT 196 G DGFVDALF +L H S++ RAD RI GG P+ R+ P RR+ + D Y+ Sbjct 157 DGAPDGFVDALFALGPDLRHESEVTRADYAARIVRGGLPEATTRTDPRRRQRFLDAYVQA 216 Query 197 ATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLALLEAAF 256 +R++S I+ E+ +++RL AAR+ + ++L + L + T A YL LE F Sbjct 217 LIDRDVRQLSDIQHKGELRKLVRLLAARSATIIAANSLESALGLSRPTIARYLQALEEIF 276 Query 257 LIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFVANEI 316 LI R+P WS NL + PKL+ DSG+A + + L RPG P GPLLE+FV +E+ Sbjct 277 LIKRIPGWSRNLGTRTTAAPKLIFVDSGIAANEIATDARALLRPGAPFGPLLESFVLSEL 336 Query 317 RKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRYLAER 376 +QLTWS + L H+RD+ EVD VLE+ G V GIEVKA +T +D RGLR LA+R Sbjct 337 SRQLTWSEQFVDLSHYRDQSRYEVDAVLENRSGHVVGIEVKAATTVGPDDFRGLRRLADR 396 Query 377 LDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 L D F GV+L PFG L ALPVS LW Sbjct 397 LGDDFIAGVVLYTGTSTLPFGDKLRALPVSALW 429 >gi|304311176|ref|YP_003810774.1| Predicted ATPase [gamma proteobacterium HdN1] gi|301796909|emb|CBL45122.1| Predicted ATPase [gamma proteobacterium HdN1] Length=406 Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 170/411 (42%), Positives = 245/411 (60%), Gaps = 7/411 (1%) Query 1 MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR 60 M +++R I +L AL D+PVV++NGARQ GK+TL RL ++LDD A AA+ Sbjct 1 MAMLDRQIQTLILEALEDSPVVLINGARQTGKSTLAQRLS--PERRYLTLDDPAVFAAAK 58 Query 61 DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 DP F++ + +DE Q P LF AIKAEVD++R GRFLLTGS +L P MAD+L Sbjct 59 SDPFGFIANQTGKICLDEIQRAPELFLAIKAEVDKNRVAGRFLLTGSTNVLLLPQMADSL 118 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA 180 GR+EIIELWP SQ E G + + + + R + + + GGFP++ Sbjct 119 AGRMEIIELWPLSQSELQGRTIDLITLFYDGNFQ--NSYRFERNEFITSLVNGGFPEVRT 176 Query 181 RSPSRRR-AWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLS 239 R+ RRR AWFD+YL T Q +R+++ I+ L E+P++++L AAR G+ LN++ L+ Sbjct 177 RASDRRREAWFDSYLLTILQRDVRDLANIDGLTELPKLMQLLAARNGSLLNMAELSRSSG 236 Query 240 IPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATL-D 298 I T YL LLE FL+ RVPAW++NL ++ + PKL +SD G+A HL G+ A + + Sbjct 237 IAQTTLKRYLTLLETLFLVRRVPAWASNLGTRLQKSPKLFLSDYGMAAHLQGLGAAAMQN 296 Query 299 RPGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKA 358 + G P G L+E FV E+ K TWS+ R L H+R G EVD VLE+ + G+EVKA Sbjct 297 KHGLP-GDLVEGFVHAELAKHQTWSSLRTHLMHYRTTTGVEVDFVLENRQQALVGVEVKA 355 Query 359 TSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 +T +D GLR+L + +F+ G+LL + F L A+P+ + Sbjct 356 AATVVGKDFNGLRHLRDTAPKQFKRGILLYTGEQTIQFDEQLVAVPMGVFF 406 >gi|299133054|ref|ZP_07026249.1| conserved hypothetical protein [Afipia sp. 1NLS2] gi|298593191|gb|EFI53391.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length=418 Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 174/414 (43%), Positives = 247/414 (60%), Gaps = 12/414 (2%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 + ER + AL+DTPVV++ G R+ GKTTLV ++ G + ++LDD +AA+ D Sbjct 1 MFERFVERRAEEALSDTPVVLIVGPRRAGKTTLVRKMGEAGRT-YITLDDQTVLEAAQSD 59 Query 63 PRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVG 122 P F+ R +D +IDE Q P L AIK +D D RPGRFLLTGSA +L+ P +AD+L G Sbjct 60 PAGFI-RGLDRAIIDEIQRAPDLLLAIKKTIDEDYRPGRFLLTGSANVLTLPRVADSLAG 118 Query 123 RVEIIELWPFSQGERAGIADGFVDALFT----APRELIHGSDMRRADLVDRIATGGFPDI 178 R+E I++ P ++ E G F++ LF + R+ I G D LV + GGFP+ Sbjct 119 RMETIQMLPLARAEIEGRTPTFLEHLFAGKLRSQRDAILGDD-----LVQLVLLGGFPEA 173 Query 179 VARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAND 237 ++R RRR W +YLT+ +R+I+ +E+L E+P+ +RL A +G +N S Sbjct 174 ISRDSERRRQDWSRSYLTSILTRDLRDIADVEKLTELPKFVRLLAEHSGQLVNYSQFGAG 233 Query 238 LSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATL 297 +++ +T Y+ LLE FLI V W TN +++++ PKL DSGL + G++ + Sbjct 234 INVSHKTGQRYVGLLEQVFLIATVQPWFTNALKRIVKTPKLHFLDSGLLATVRGLSFDRV 293 Query 298 DRPGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVK 357 G LLE+FV EI K +T S R + HFRDR G EVD+VLE DG + GIEVK Sbjct 294 KADRSTFGALLESFVFAEILKLMTASDLRLTPHHFRDRDGREVDIVLERDDGMIAGIEVK 353 Query 358 ATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 A++T +A D GLR LAE DRF FGV+L + + PFG LAA P+S+LW G Sbjct 354 ASATVKAGDFGGLRALAEACGDRFAFGVVLYDSTDVVPFGDRLAAAPLSSLWNG 407 >gi|209544898|ref|YP_002277127.1| hypothetical protein Gdia_2779 [Gluconacetobacter diazotrophicus PAl 5] gi|209532575|gb|ACI52512.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length=406 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 174/413 (43%), Positives = 248/413 (61%), Gaps = 12/413 (2%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 + ER + AL+DTPVV++ G R+ GKTTLV ++ G + ++LDD +AA+ D Sbjct 1 MFERFVERRAEEALSDTPVVLIVGPRRAGKTTLVRKMGEAGRT-YITLDDQTVLEAAQSD 59 Query 63 PRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVG 122 P F+ R +D +IDE Q P L AIK VD D RPGRFLLTGSA +L+ P +AD+L G Sbjct 60 PAGFI-RGLDRAIIDEIQRVPDLLLAIKKTVDEDYRPGRFLLTGSANVLTLPRIADSLAG 118 Query 123 RVEIIELWPFSQGERAGIADGFVDALF----TAPRELIHGSDMRRADLVDRIATGGFPDI 178 R+E I++ P ++ E G F++ LF + R+ I G D+ R L+ GGFP+ Sbjct 119 RMETIQMLPLAKAEIEGRRPTFLERLFEGKLQSQRDAIVGDDLVRLALL-----GGFPEA 173 Query 179 VARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAND 237 ++R RRR W +YLT+ +R+I+ +E+L E+P+ +RL A +G +N S + Sbjct 174 ISRESERRRQDWLRSYLTSILTRDLRDIADVEKLTELPKFVRLLAEHSGQLVNYSQFGSG 233 Query 238 LSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATL 297 +++ +T Y+ALLE FLI V W TN +++++ PKL DSGL + G+T + Sbjct 234 INVTHKTGQRYVALLEQVFLIATVQPWFTNALKRIVKTPKLHFLDSGLLASVRGLTFDRV 293 Query 298 DRPGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVK 357 G LLE+FV +E+ K +T S R + HFRDR EVDLVLE DG + GIEVK Sbjct 294 KADRGAFGALLESFVFSEVLKLMTASDLRLTPHHFRDRDMREVDLVLERDDGMIAGIEVK 353 Query 358 ATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 A++T +A D GLR LA+ DRF FGV+L + + PFG LAA P+S LW Sbjct 354 ASATVKAGDFAGLRALADACGDRFAFGVVLYDSSDIVPFGDKLAAAPLSCLWG 406 >gi|15842758|ref|NP_337795.1| hypothetical protein MT3270 [Mycobacterium tuberculosis CDC1551] gi|289746993|ref|ZP_06506371.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|13883082|gb|AAK47609.1| hypothetical protein MT3270 [Mycobacterium tuberculosis CDC1551] gi|289687521|gb|EFD55009.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|339296012|gb|AEJ48123.1| hypothetical protein CCDC5079_2933 [Mycobacterium tuberculosis CCDC5079] gi|339299623|gb|AEJ51733.1| hypothetical protein CCDC5180_2896 [Mycobacterium tuberculosis CCDC5180] Length=454 Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 170/416 (41%), Positives = 240/416 (58%), Gaps = 9/416 (2%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 35 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 94 Query 63 PRAFVSRPVDTLVIDEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 P ++ +DE Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 95 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 153 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 154 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 212 Query 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 213 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 272 Query 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 273 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 332 Query 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 L RP GP++ETFV NE+ K + L+HFRDR G E+D +L+ PD RV G+E Sbjct 333 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 392 Query 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 393 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 448 >gi|15610315|ref|NP_217695.1| hypothetical protein Rv3179 [Mycobacterium tuberculosis H37Rv] gi|31794357|ref|NP_856850.1| hypothetical protein Mb3205 [Mycobacterium bovis AF2122/97] gi|121639065|ref|YP_979289.1| hypothetical protein BCG_3205 [Mycobacterium bovis BCG str. Pasteur 1173P2] 30 more sequence titles Length=429 Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 170/416 (41%), Positives = 240/416 (58%), Gaps = 9/416 (2%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 Query 63 PRAFVSRPVDTLVIDEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 P ++ +DE Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 70 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 187 Query 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 188 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 247 Query 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 248 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 307 Query 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 L RP GP++ETFV NE+ K + L+HFRDR G E+D +L+ PD RV G+E Sbjct 308 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 367 Query 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 368 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 423 >gi|298526654|ref|ZP_07014063.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308232362|ref|ZP_07415834.2| hypothetical protein TMAG_03641 [Mycobacterium tuberculosis SUMu001] gi|308370176|ref|ZP_07420559.2| hypothetical protein TMBG_01872 [Mycobacterium tuberculosis SUMu002] 24 more sequence titles Length=428 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 170/416 (41%), Positives = 240/416 (58%), Gaps = 9/416 (2%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 9 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 68 Query 63 PRAFVSRPVDTLVIDEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 P ++ +DE Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 69 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 127 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 128 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 186 Query 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 187 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 246 Query 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 247 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 306 Query 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 L RP GP++ETFV NE+ K + L+HFRDR G E+D +L+ PD RV G+E Sbjct 307 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 366 Query 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 367 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 422 >gi|254233792|ref|ZP_04927117.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|124599321|gb|EAY58425.1| conserved hypothetical protein [Mycobacterium tuberculosis C] Length=494 Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 170/416 (41%), Positives = 240/416 (58%), Gaps = 9/416 (2%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 75 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 134 Query 63 PRAFVSRPVDTLVIDEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 P ++ +DE Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 135 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 193 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 194 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 252 Query 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 253 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 312 Query 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 313 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 372 Query 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 L RP GP++ETFV NE+ K + L+HFRDR G E+D +L+ PD RV G+E Sbjct 373 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 432 Query 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 433 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 488 >gi|148824374|ref|YP_001289128.1| hypothetical protein TBFG_13201 [Mycobacterium tuberculosis F11] gi|253800214|ref|YP_003033215.1| hypothetical protein TBMG_03223 [Mycobacterium tuberculosis KZN 1435] gi|289555453|ref|ZP_06444663.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|148722901|gb|ABR07526.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253321717|gb|ACT26320.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289440085|gb|EFD22578.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|328459951|gb|AEB05374.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length=454 Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 170/416 (41%), Positives = 239/416 (58%), Gaps = 9/416 (2%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 35 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 94 Query 63 PRAFVSRPVDTLVIDEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 P ++ +DE Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 95 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 153 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 154 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 212 Query 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 213 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 272 Query 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 273 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 332 Query 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 L RP GP++ETFV NE+ K + L HFRDR G E+D +L+ PD RV G+E Sbjct 333 LARPTAEGAGPIMETFVINELMKLRAATELEVDLHHFRDRDGREIDCILQTPDSRVVGVE 392 Query 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 393 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 448 >gi|254552272|ref|ZP_05142719.1| hypothetical protein Mtube_17778 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289763363|ref|ZP_06522741.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|297635823|ref|ZP_06953603.1| hypothetical protein MtubK4_16947 [Mycobacterium tuberculosis KZN 4207] gi|297732820|ref|ZP_06961938.1| hypothetical protein MtubKR_17102 [Mycobacterium tuberculosis KZN R506] gi|313660153|ref|ZP_07817033.1| hypothetical protein MtubKV_17107 [Mycobacterium tuberculosis KZN V2475] gi|289710869|gb|EFD74885.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|344221012|gb|AEN01643.1| hypothetical protein MTCTRI2_3242 [Mycobacterium tuberculosis CTRI-2] Length=429 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 170/416 (41%), Positives = 239/416 (58%), Gaps = 9/416 (2%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 Query 63 PRAFVSRPVDTLVIDEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 P ++ +DE Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 70 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 Query 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 187 Query 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 188 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 247 Query 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 248 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 307 Query 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 L RP GP++ETFV NE+ K + L HFRDR G E+D +L+ PD RV G+E Sbjct 308 LARPTAEGAGPIMETFVINELMKLRAATELEVDLHHFRDRDGREIDCILQTPDSRVVGVE 367 Query 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 368 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 423 >gi|256830086|ref|YP_003158814.1| ATPase AAA [Desulfomicrobium baculatum DSM 4028] gi|256579262|gb|ACU90398.1| AAA family ATPase [Desulfomicrobium baculatum DSM 4028] Length=418 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 168/406 (42%), Positives = 241/406 (60%), Gaps = 4/406 (0%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R I P ++ ALAD PVV+++G RQ GKTTL + +S DD R AA+ DP Sbjct 9 RFIRPRLVEALADAPVVLIHGPRQCGKTTLARQAGEAADFAYLSFDDDVQRAAAQTDPVG 68 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 +V+ +++DE Q P LF A+KA VD R PGRF+LTGSA +L P +AD+L GR+E Sbjct 69 YVADLPARVILDEIQRVPELFTALKAAVDARREPGRFILTGSANVLLIPRLADSLAGRME 128 Query 126 IIELWPFSQGERAGIADGFVDALFTAP-RELIHGSDMRRADLVDRIATGGFPDIVARSPS 184 I+ L P +Q E AG F+ AL + I G + R DL +R+A GG+P + RS + Sbjct 129 ILRLHPLAQAELAGKNPEFLPALLQGRFKAGITGQRLGR-DLAERVAAGGYPPALKRSSA 187 Query 185 RRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPAR 243 +RRA W+ +Y T Q IR+++ I ++ +PR+L L A +T LNVS LA + Sbjct 188 KRRAVWYRDYAETLVQRDIRDLARISQMGALPRLLTLAAGQTARLLNVSDLAAPFQVTRP 247 Query 244 TTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRP 303 T Y+ LL FL+ +P W +N ++I+ PKL + D+GLAC LLG+ TL Sbjct 248 TIREYVTLLSRIFLLEELPPWHSNRLSRLIKTPKLHLGDTGLACALLGLDAGTLWNDRAV 307 Query 304 LGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPR 363 G +LETFV E+R+Q W + S H+RD+ EVD+VLE GR+ G+EVKA+ST Sbjct 308 FGQMLETFVYQELRRQAGWLDDAVSFSHYRDKDKTEVDIVLEC-GGRIAGVEVKASSTVT 366 Query 364 AEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 +D +GLR L + +++RF G+++ PFG L A+P+ +LW Sbjct 367 GDDFKGLRKLQQAVENRFVAGIVMYDGEAVVPFGSQLYAVPICSLW 412 >gi|336117254|ref|YP_004572021.1| hypothetical protein MLP_16040 [Microlunatus phosphovorus NM-1] gi|334685033|dbj|BAK34618.1| hypothetical protein MLP_16040 [Microlunatus phosphovorus NM-1] Length=420 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 180/404 (45%), Positives = 242/404 (60%), Gaps = 1/404 (0%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R A V ALADT VV+VNGARQ GK+TLV + +E +LD A R AA DP Sbjct 13 RHAADRVTGALADTRVVLVNGARQCGKSTLVGLIGRSRDAEFRTLDRGAVRQAAVFDPPT 72 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 FV+ LVIDE Q P L AIK VD D RPG+FLLTGSAR+L + D L+GR+E Sbjct 73 FVTSD-RLLVIDEIQRVPELLLAIKERVDTDLRPGQFLLTGSARVLGLKALPDTLLGRME 131 Query 126 IIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSR 185 +ELWP +QGE DGFVDA+F H + R+ V RI GGFP+ VAR+P R Sbjct 132 TVELWPLAQGEIDDGPDGFVDAIFELGPAFRHRTSETRSGYVSRIVRGGFPEAVARTPRR 191 Query 186 RRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTT 245 R +F++YL + ++ ++R AE+ + RL AAR+G L +LA L + RT Sbjct 192 RTRFFESYLADLVNRDVIQLMDVQRGAELRALTRLVAARSGQLLVPGSLAGPLGLSQRTV 251 Query 246 AGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLG 305 YL LLE FLI R+PAW+ + S + +R PK+ DSGLA LG ++L RP LG Sbjct 252 ERYLTLLEEVFLIKRIPAWARSPSARAVRTPKVAYVDSGLAAAALGHDESSLGRPDGQLG 311 Query 306 PLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAE 365 LLE FV +E+ +QL+WS + L+H+R + EVD V+E+ G+V I+VKA++ R E Sbjct 312 GLLEGFVLSELARQLSWSAQLADLFHYRTKDQVEVDAVIENRRGQVVAIKVKASTMVRGE 371 Query 366 DLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 D G+R+L+ R+ GV+L A E FG + A+P++ LW Sbjct 372 DFAGIRHLSARIGTDLVVGVVLYAGAETLSFGDRMLAVPIAALW 415 >gi|153012018|ref|YP_001373230.1| hypothetical protein Oant_4815 [Ochrobactrum anthropi ATCC 49188] gi|151563906|gb|ABS17401.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length=406 Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 166/409 (41%), Positives = 245/409 (60%), Gaps = 4/409 (0%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 + +R I V AL+DTPVV++ G R+ GKTT+ ++ G + ++LDD +AAR D Sbjct 1 MYKRLIEHRVEEALSDTPVVLIVGPRRAGKTTIARKMGEIGRT-YITLDDQTALEAARSD 59 Query 63 PRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVG 122 P F+ R +D +IDE Q P L AIK VD D RPGRFLLTGSA +L+ P +AD+L G Sbjct 60 PAGFI-RGLDLAIIDEIQRAPELLLAIKKTVDEDYRPGRFLLTGSANVLTLPRVADSLAG 118 Query 123 RVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARS 182 R+E I + P ++ E G F++ LF A + +G + DL+ + +GGFP+ ++R Sbjct 119 RMETIRMLPLARAEINGQMPTFLERLF-AGKHQGNGEAIVGDDLIQFVLSGGFPEAISRE 177 Query 183 PSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIP 241 RRR W +YLT+ +R+I+ IE+L E+P+ +RL A +G +N S + +++ Sbjct 178 SERRRQDWARSYLTSVLTRDLRDIAEIEKLTELPKFVRLLAEHSGQLVNYSQFGSSINVS 237 Query 242 ARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPG 301 +T Y+ALLE FL+ + W TN +++ + PKL DSGL G+T + Sbjct 238 HKTGQRYVALLEQVFLVSTLQPWYTNALKRIAKTPKLHFLDSGLLATARGLTFDRVKADR 297 Query 302 RPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATST 361 G LLE+FV E+ K + S R + +HFRD+ EVD+VLE DG + GIEVKA++T Sbjct 298 GTFGALLESFVFAEVLKLMDASDLRVTPYHFRDQQMHEVDIVLERDDGMIVGIEVKASAT 357 Query 362 PRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 R+ D GLR LA+ DRF +GV+L + + PFG L+A P+S LW+ Sbjct 358 VRSSDFAGLRTLADACKDRFAYGVVLYDSKDVVPFGDRLSAAPLSALWS 406 >gi|119357028|ref|YP_911672.1| AAA family ATPase [Chlorobium phaeobacteroides DSM 266] gi|119354377|gb|ABL65248.1| ATPase, AAA+ superfamily [Chlorobium phaeobacteroides DSM 266] Length=415 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 170/409 (42%), Positives = 237/409 (58%), Gaps = 6/409 (1%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R + P ++ ALAD+PVV+++G RQ GKTTL + + DD R AA+ DP Sbjct 9 RFLRPRIVEALADSPVVLLHGPRQCGKTTLARLVGDEAGFAYFTFDDDVQRAAAQTDPIG 68 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 +V+ + V+DE Q P LF ++KA VD R PGRF+LTGSA +L P +AD+L GR+E Sbjct 69 YVADLPERAVLDEVQRVPELFTSLKAAVDTRRLPGRFILTGSANVLLVPKLADSLAGRME 128 Query 126 IIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSR 185 I+ L P SQ E G GFV LF + + L R+ GGFP +AR+ R Sbjct 129 ILRLHPLSQAELGGKPCGFVSRLFASDFKAGPSGLRLGKTLAQRVVAGGFPAALARANER 188 Query 186 RRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPART 244 R A W+ +Y T Q IR+++ I + +PR+L L A +T +NVS LA I +T Sbjct 189 RSATWYRDYAETLIQRDIRDLARISAMDALPRLLTLAAGQTACLVNVSELAAPFQISRQT 248 Query 245 TAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATL--DRPGR 302 YL +L FL+ +P+W N +++++ PKL V D+GLAC LLG+ G +L DRP Sbjct 249 IREYLTILSRIFLVDELPSWHRNRMKRLVKTPKLHVGDTGLACALLGLNGNSLWGDRP-- 306 Query 303 PLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTP 362 G LLETFV E+R+ +W E + HFRD+ EVD+VLE +G + G+EVKA ST Sbjct 307 LFGRLLETFVYQELRRLASWHEEAVAFSHFRDKDQVEVDVVLE-SEGLMAGVEVKAASTV 365 Query 363 RAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 +D +GLR L + + + F GV+L FG L A+P+S LWAG Sbjct 366 TGDDFKGLRKLKDAVQNNFAAGVVLYDGESVAGFGDRLYAVPISRLWAG 414 >gi|110632900|ref|YP_673108.1| hypothetical protein Meso_0540 [Mesorhizobium sp. BNC1] gi|110283884|gb|ABG61943.1| conserved hypothetical protein [Chelativorans sp. BNC1] Length=406 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 171/397 (44%), Positives = 238/397 (60%), Gaps = 4/397 (1%) Query 15 ALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTL 74 ALADTPVV++ G R+ GKTTLV ++ G + +LDD +AA+ DP F+ R +D Sbjct 13 ALADTPVVLIVGPRRAGKTTLVRKMGETGWT-YSTLDDQTVLEAAQSDPAGFI-RGLDRA 70 Query 75 VIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQ 134 +IDE Q P L AIK VD D RPGRFLLTGSA +L+ P +AD+L GR+E I + P ++ Sbjct 71 IIDEIQRAPNLLLAIKKTVDEDYRPGRFLLTGSANVLTLPRVADSLAGRMETIRMLPLAR 130 Query 135 GERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRRA-WFDNY 193 E A F++ LF E + + +LV GGFP+ ++R RRR W Y Sbjct 131 AEIESRAPTFLERLFEGNLE-SQSAAIVGDELVQLALRGGFPEAISRDSERRRQDWARAY 189 Query 194 LTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLALLE 253 LT+ +R+I+ +E+L E+P+ +RL A +G +N S LA+ +++ RT Y+ LLE Sbjct 190 LTSILTRDLRDIAEVEKLTELPKFVRLLAEHSGQLVNYSQLASGINVNHRTGQRYVGLLE 249 Query 254 AAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFVA 313 FLI + W TN +++++ PKL DSGL G+T + G LLE+FV Sbjct 250 QVFLIATLQPWFTNALKRIVKTPKLHFLDSGLLAAARGLTFDRIKADRGAFGALLESFVF 309 Query 314 NEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRYL 373 +E+ K +T S R + HFRDR EVD+VLE DG + IEVKA++T +A D GLR L Sbjct 310 SEVLKLMTASDLRLTPHHFRDRDMREVDIVLERDDGMIAAIEVKASATVKASDFSGLRAL 369 Query 374 AERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 AE DRF FGV+L + + PFG +LAA P+S LWA Sbjct 370 AEACGDRFAFGVVLYDSTDVVPFGDSLAAAPLSCLWA 406 >gi|46255211|ref|YP_006123.1| hypothetical protein TT_P0140 [Thermus thermophilus HB27] gi|46198060|gb|AAS82470.1| hypothetical conserved protein [Thermus thermophilus HB27] Length=446 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 162/352 (47%), Positives = 214/352 (61%), Gaps = 3/352 (0%) Query 58 AARDDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMA 117 AA+ DP+ F+S +V+DE Q PGLF +KA VDRDRRPGRFLLTGSA +L+ P A Sbjct 96 AAQLDPQGFLSGLQGRVVLDEVQRAPGLFLPLKALVDRDRRPGRFLLTGSANVLALPRAA 155 Query 118 DALVGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPD 177 + LVGR+ + LWP SQGE G +GF+ ALF + G R L +R+ GG+P+ Sbjct 156 EHLVGRMALFTLWPLSQGELEGRKEGFLSALFAEEVPPVQGEG--RWPL-ERLLRGGYPE 212 Query 178 IVARSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAND 237 V P RR AWF +YL T +RE+S +ERL E+PR+ L A R LN + L+ Sbjct 213 AVRLPPERRGAWFRDYLATVLAREVRELSQVERLGELPRLYALLATRPAQLLNWAELSRA 272 Query 238 LSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATL 297 S+PA T Y ALLEA +L+ +P W NL +++ + PK++ +D GLA H G+ GA L Sbjct 273 SSLPATTLKRYFALLEALYLVRTLPPWQANLGKRLTKSPKVLPTDPGLALHAAGLDGARL 332 Query 298 DRPGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVK 357 + LG LE FVA E+ KQ ++ ++H+R G EVDLVLE P G+V G+EVK Sbjct 333 EGDPILLGKYLEAFVAMEVVKQAGYAGVAVEVFHYRSHSGEEVDLVLEGPGGKVVGVEVK 392 Query 358 ATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 A + R EDLRGL+ LA+ L RF GV+L E PF L ALP+ LW Sbjct 393 ARGSLRPEDLRGLKSLAQALGPRFHRGVVLYLGRETVPFAKDLYALPLEALW 444 >gi|298529035|ref|ZP_07016438.1| AAA family ATPase [Desulfonatronospira thiodismutans ASO3-1] gi|298510471|gb|EFI34374.1| AAA family ATPase [Desulfonatronospira thiodismutans ASO3-1] Length=408 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 166/404 (42%), Positives = 235/404 (59%), Gaps = 4/404 (0%) Query 10 PSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSR 69 P VL +L DTPVV+++G RQ GKTTL + +S DD R AA+ DP +V+ Sbjct 2 PRVLESLTDTPVVLIHGPRQCGKTTLARLVGDARGFTYLSFDDDVQRSAAQFDPVGYVAD 61 Query 70 PVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIEL 129 + +++DE Q P LF ++KA VD R+PGRF+LTGSA +L P +AD+L GR+ I+ L Sbjct 62 LPEQVILDEVQRVPELFTSLKAVVDERRKPGRFILTGSAHVLMVPRLADSLAGRMAILRL 121 Query 130 WPFSQGERAGIADGFVDALFT-APRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRR- 187 P S+ E AG F++ALF R + G R L + I GG+P ++R+ +RRR Sbjct 122 HPLSRAEIAGKPAAFLNALFGRGFRIGVFGRRQGRV-LAEHITAGGYPAALSRTTARRRT 180 Query 188 AWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAG 247 AW+ +Y+ T Q + +++ I RL MPR+L + A +T +NVS +A+ + T Sbjct 181 AWYRDYIDTLVQRDVLDLTRISRLDVMPRLLEMAAGQTARLINVSDMASPFQVSRPTIRE 240 Query 248 YLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPL 307 YL LL FL+ +P W +N ++I+ PKL + D GLAC LLGV +L + G L Sbjct 241 YLTLLSRIFLLEELPPWHSNRLSRLIKTPKLHLGDPGLACALLGVDAGSLWQDRALFGQL 300 Query 308 LETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDL 367 LETF+ E+R+Q W + S HFRD+ EVD+VLE G++ GIEVKA ST + D Sbjct 301 LETFILQELRRQAGWQEDDISFSHFRDKDNNEVDMVLE-SGGKLAGIEVKAGSTVTSSDF 359 Query 368 RGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 GL+ L + F GV+L PFG L A+P+S LW G Sbjct 360 NGLQKLQRAAEKSFTAGVVLYDGDSVVPFGKDLYAVPISCLWGG 403 >gi|167621599|ref|YP_001672107.1| hypothetical protein Caul_5329 [Caulobacter sp. K31] gi|167351722|gb|ABZ74448.1| conserved hypothetical protein [Caulobacter sp. K31] Length=407 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 169/397 (43%), Positives = 232/397 (59%), Gaps = 5/397 (1%) Query 15 ALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTL 74 AL+DT VV++ G RQ GKTTL L G + ++LDD AA+ DP V R +D Sbjct 13 ALSDTRVVLLAGPRQAGKTTLARSLAEAGRT-YLTLDDATTLSAAKADPAGLV-RGLDKA 70 Query 75 VIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQ 134 VIDE Q P L AIK VDRD RPGRFLLTGSA L++ P +AD+L GR+E I L P +Q Sbjct 71 VIDEVQRAPDLLLAIKDSVDRDTRPGRFLLTGSANLMTLPRVADSLAGRMETIRLMPLAQ 130 Query 135 GERAGI-ADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSP-SRRRAWFDN 192 E G A F+ +LF + ADL+D + GG+P+ +AR +RR+ W+ N Sbjct 131 SEILGQPASRFLASLFAGQAPPPGPPRLG-ADLIDLVLAGGYPEALARKTWARRQDWYAN 189 Query 193 YLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLALL 252 Y+ +R+I+ I++L MPR+LR A +G +N + + L + TT Y + Sbjct 190 YIEAVVGRDVRDIANIDQLDRMPRLLRALAEHSGQLINHAGVGASLDLNHVTTQKYTGVF 249 Query 253 EAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFV 312 E FL+ +P W N +++ ++PKL DSGL L G+T + G +LETFV Sbjct 250 EQLFLVRTLPPWHNNALKRLTKKPKLHFLDSGLLAALRGLTPERVAADRSNFGAVLETFV 309 Query 313 ANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRY 372 E+ K WS ER SL HFRD+ EVD+VLE G++ G+EVK ++T R+ED GLR Sbjct 310 FAEVLKLTGWSDERFSLSHFRDKEQDEVDIVLEDRQGKIVGLEVKGSATVRSEDFAGLRK 369 Query 373 LAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 LA+ + DRF FG +L + PFG LAA P+S+LW Sbjct 370 LAQAVGDRFAFGAVLYDYEQVVPFGERLAAAPLSSLW 406 >gi|323138759|ref|ZP_08073824.1| hypothetical protein Met49242DRAFT_3212 [Methylocystis sp. ATCC 49242] gi|322396006|gb|EFX98542.1| hypothetical protein Met49242DRAFT_3212 [Methylocystis sp. ATCC 49242] Length=406 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 169/400 (43%), Positives = 238/400 (60%), Gaps = 12/400 (3%) Query 15 ALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTL 74 ALADTPVV++ G R+ GKTTLV ++ G + +LDD +AA DP F+ R +D Sbjct 13 ALADTPVVLIVGPRRAGKTTLVRKMGETGWT-YSTLDDQTVLEAAHSDPAGFI-RGLDRA 70 Query 75 VIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQ 134 +IDE Q P L AIK +D D RPGRFLLTGSA +L+ P +AD+L GR+E I + P ++ Sbjct 71 IIDEIQRAPSLLLAIKKSIDEDYRPGRFLLTGSANVLTLPRVADSLAGRMETIRMLPLAR 130 Query 135 GERAGIADGFVDALF----TAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRRA-W 189 E F++ LF + + I G ++ R I GGFP+ ++R RRR W Sbjct 131 AEIENRTPTFLERLFAGNLQSQKNAIVGDELIRL-----ILLGGFPEAISRDSERRRQDW 185 Query 190 FDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYL 249 +YLT+ +R+I+ +E+L E+P+ +RL A +G +N S LA+ +++ RT Y+ Sbjct 186 ARSYLTSILTRDLRDIAEVEKLTELPKFVRLLAEHSGQLVNYSQLASGINVNHRTGQRYV 245 Query 250 ALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLE 309 LLE FLI + W TN +++++ PKL DSGL G+T + G LLE Sbjct 246 GLLEQVFLIATLQPWFTNALKRIVKTPKLHFLDSGLLAAARGLTFDRIKADRGAFGALLE 305 Query 310 TFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRG 369 +FV +E+ K +T S R + HFRDR EVD+VLE DG + IEVKA++T +A D G Sbjct 306 SFVFSEVLKLMTASDLRLTPHHFRDRDMREVDIVLERDDGMIAAIEVKASATVKASDFSG 365 Query 370 LRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 LR LAE DRF FGV+L + + PFG LAA P+S+LW Sbjct 366 LRALAEACGDRFAFGVILYDSSDIVPFGDRLAAAPLSSLW 405 >gi|284045327|ref|YP_003395667.1| ATPase AAA [Conexibacter woesei DSM 14684] gi|283949548|gb|ADB52292.1| AAA family ATPase [Conexibacter woesei DSM 14684] Length=416 Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 167/412 (41%), Positives = 237/412 (58%), Gaps = 5/412 (1%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARL---DYPGSSEVVSLDDVANRDAA 59 ++ R + VLAALA++ V GARQVGK+TLVA L D+P +EV++LD R+AA Sbjct 1 MLSRHMRSRVLAALAESRAVAALGARQVGKSTLVADLAASDHP--AEVLTLDVRETREAA 58 Query 60 RDDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADA 119 DP FV+ D + IDE Q P L AIK +D ++ G+FLLTGSA +LS P + DA Sbjct 59 EQDPTGFVAALPDRVAIDEVQRVPDLLLAIKQRLDHNQERGQFLLTGSANILSIPKVRDA 118 Query 120 LVGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIV 179 L GRV+ + LWP SQGE G + F+D L + G + RA I GG+P+ Sbjct 119 LPGRVDYLRLWPLSQGELTGRRETFIDRLLAGEPPRMTGQRIGRASYAAAIVAGGYPEAH 178 Query 180 ARSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLS 239 RS R ++F +Y + + +I+ + + + R+LRL A+RT + +A DL Sbjct 179 ERSRRGRSSFFASYTDSLLGRDLADIATVRNVDNVKRLLRLIASRTAGLASFHGMARDLG 238 Query 240 IPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDR 299 + T + +LE FL+ +PAW +NL + I+ PKL + DSGL L GV L Sbjct 239 VDTNTARSHTGVLEDLFLVRSLPAWHSNLGSRQIKSPKLHIVDSGLLAWLAGVDEQRLAD 298 Query 300 PGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKAT 359 G G +E+FVA E+ +Q W+ +L H+RD+ G EVD+V+E P G V G+EVKA Sbjct 299 DGPLAGACIESFVAMELLRQSEWAEAETTLHHYRDQQGREVDVVIETPAGDVVGVEVKAG 358 Query 360 STPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 ++ R D RGL ++ +RL RF+ GV+L A + PFG L A P+S LW G Sbjct 359 ASARPADFRGLAHMRDRLGSRFRAGVVLYAGERSLPFGERLTAQPLSALWDG 410 >gi|289166273|ref|YP_003456411.1| hypothetical protein LLO_2944 [Legionella longbeachae NSW150] gi|288859446|emb|CBJ13386.1| hypothetical protein LLO_2944 [Legionella longbeachae NSW150] Length=410 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 153/406 (38%), Positives = 239/406 (59%), Gaps = 9/406 (2%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R + + A+ DTPVV++NG RQ GKTTLV +Y S +LDD +A + DP Sbjct 10 RQLKSQMEVAMKDTPVVLINGPRQSGKTTLVK--EYSPSLPYYTLDDDNILNAVKQDPVG 67 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 FV+R +DT +IDE Q P L RAIK +D +R+PGRFLLTGSA LL+ P + D+L GR+E Sbjct 68 FVNR-IDTAIIDEIQRAPELLRAIKLSIDENRQPGRFLLTGSANLLALPQIGDSLAGRME 126 Query 126 IIELWPFSQGERAGIADGFVDALF--TAPRELIHGSDMRRADLVDRIATGGFPDIVAR-S 182 I+ L+P S E + F+ + P + + ++D++ + TGG+P+++ R + Sbjct 127 ILTLFPLSLAEIERRENHFIKYALDQSWPNQ---ATRSEQSDVISQALTGGYPEMLTRPT 183 Query 183 PSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPA 242 RR AW +Y+ + +R+IS IE+L EMPR+L + A ++G N + + L++ Sbjct 184 FERRNAWAKSYIKAIVERDVRDISSIEKLVEMPRLLEVLAQQSGKLTNFTQIGGQLNLDT 243 Query 243 RTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGR 302 +T Y+ LLE FL+H++ W N ++++ PK+ DSGL L VT ++++ Sbjct 244 KTAQKYVGLLETLFLVHQLRPWHGNTLNRIVKTPKIHFIDSGLLACLNRVTIESIEQDKS 303 Query 303 PLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTP 362 G LLET+V +E+ K T + E +++++RD+ EVD +LE+ ++ GIEVKA+ T Sbjct 304 SFGALLETWVYSELLKMCTLANEPWNIYYYRDKDQVEVDFILENHARKIIGIEVKASQTI 363 Query 363 RAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTL 408 +D RGLR LA D + G++L + + FG L A+P S L Sbjct 364 LNQDFRGLRKLASLADKNWVSGIVLYSGDKCLSFGDNLWAIPFSLL 409 >gi|56459638|ref|YP_154919.1| ATPase [Idiomarina loihiensis L2TR] gi|56178648|gb|AAV81370.1| Predicted ATPase, AAA+ superfamily [Idiomarina loihiensis L2TR] Length=414 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 159/413 (39%), Positives = 235/413 (57%), Gaps = 11/413 (2%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 ++ER S+L AL DTPV++++G+RQ GKTTL + ++ DD AA+ D Sbjct 5 LLERYTKESLLDALEDTPVILIHGSRQCGKTTLAKSVGEVLGYAYITFDDENQLGAAKAD 64 Query 63 PRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVG 122 P FV + ++DE Q P LF +IK VD +R PGRF+LTGSA +L P ++D+L G Sbjct 65 PVGFVKSLPEKTILDEIQRVPELFLSIKESVDANRVPGRFILTGSANVLLLPQLSDSLAG 124 Query 123 RVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRR-----ADLVDRIATGGFPD 177 R+EII L P +Q E G F+ +LF+ L ++ + L D + GG+P Sbjct 125 RMEIIHLRPLAQCEITGQKPNFLASLFS--ESLFSAVTNKKTASLGSSLADILVQGGYPA 182 Query 178 IVARSPSRRR-AWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 + R ++RR AW+ Y+TT Q I++++ I + +P++L L A++TG N S LA+ Sbjct 183 AIQRKAAKRRNAWYRGYITTILQRDIKDLANIRNVNLLPKLLSLAASQTGRLFNSSELAS 242 Query 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 S+ T YLALLE FLI + W +N ++I+ PKL +SD+GLA LLGV Sbjct 243 PFSVSRPTVREYLALLEQIFLIEELSPWHSNRISRLIKTPKLHLSDTGLASSLLGVNADE 302 Query 297 LDRPGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRV-CGIE 355 L + LG LLETF+ E+RK +W E +HFR++ EVD+++E GR+ GIE Sbjct 303 LWKDKELLGQLLETFIYQELRKHASWHDEDLKFYHFRNKDKVEVDIIIE--KGRLKAGIE 360 Query 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTL 408 VKA +T + D +GL L + F G++ + PFG L A+P+S L Sbjct 361 VKAAATVKQSDFKGLIRLKDACKGDFAGGIVFYDGEQVLPFGDKLYAVPISHL 413 >gi|85707504|ref|ZP_01038581.1| predicted ATPase (AAA+ superfamily protein) [Roseovarius sp. 217] gi|85667984|gb|EAQ22868.1| predicted ATPase (AAA+ superfamily protein) [Roseovarius sp. 217] Length=408 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 156/404 (39%), Positives = 239/404 (60%), Gaps = 12/404 (2%) Query 12 VLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPV 71 V AL+DT VV+++G RQ GKTTL + + ++LDD +A +DP FV R + Sbjct 10 VEEALSDTRVVLISGPRQSGKTTLATDI-ASDKTPFLTLDDANVLRSAINDPIGFV-RGL 67 Query 72 DTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWP 131 D VIDE Q P L AIK VD D+ PGRFLLTGSA L++ P AD+L GR+E++ L P Sbjct 68 DRAVIDEIQRAPDLLLAIKNLVDDDKTPGRFLLTGSANLMTIPKAADSLAGRMEVVRLLP 127 Query 132 FSQGERAGIADGFVDALFTAPR----ELIHGSDMRRADLVDRIATGGFPDIVARSP-SRR 186 SQ E G F+D FT + +I G + LV + TGG+P+ ++R+ SR+ Sbjct 128 LSQAEILGTKSDFIDRAFTGEKPTADHMIIGDE-----LVINVLTGGYPEALSRTRWSRK 182 Query 187 RAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTA 246 + W+ +YL Q +R+++ IE+LA MP+++ + A +G +N + + L + TT Sbjct 183 QDWYHSYLDAIVQRDVRDVAQIEQLAIMPKLMSVLAEHSGQLVNYTGIGAGLDLNHVTTQ 242 Query 247 GYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGP 306 Y+++ E+ +L+H + W TN +++ + PKL D+GL + V+ + + G Sbjct 243 KYVSVFESLYLVHTLKPWFTNRLKRLTKSPKLHFLDAGLLAAMRDVSPEVVGKDKTSFGA 302 Query 307 LLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAED 366 +LETFV +E+RK TWS +R + HFRD+ EVD+VLE+ G V GIEVK+++T A D Sbjct 303 ILETFVFSELRKIATWSEQRCTFSHFRDKDKNEVDIVLENRRGEVVGIEVKSSATVSAGD 362 Query 367 LRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 G+R LA+ ++F G++L + PFG + A P+S LW+ Sbjct 363 FSGMRKLADACGEKFVQGMVLYDHDKVVPFGENMFAAPLSCLWS 406 >gi|270158952|ref|ZP_06187608.1| putative ATPase [Legionella longbeachae D-4968] gi|269987291|gb|EEZ93546.1| putative ATPase [Legionella longbeachae D-4968] Length=391 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 151/396 (39%), Positives = 235/396 (60%), Gaps = 9/396 (2%) Query 16 LADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTLV 75 + DTPVV++NG RQ GKTTLV +Y S +LDD +A + DP FV+R +DT + Sbjct 1 MKDTPVVLINGPRQSGKTTLVK--EYSPSLPYYTLDDDNILNAVKQDPVGFVNR-IDTAI 57 Query 76 IDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQG 135 IDE Q P L RAIK +D +R+PGRFLLTGSA LL+ P + D+L GR+EI+ L+P S Sbjct 58 IDEIQRAPELLRAIKLSIDENRQPGRFLLTGSANLLALPQIGDSLAGRMEILTLFPLSLA 117 Query 136 ERAGIADGFVDALF--TAPRELIHGSDMRRADLVDRIATGGFPDIVAR-SPSRRRAWFDN 192 E + F+ + P + + ++D++ + TGG+P+++ R + RR AW + Sbjct 118 EIERRENHFIKYALDQSWPNQ---ATRSEQSDVISQALTGGYPEMLTRPTFERRNAWAKS 174 Query 193 YLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLALL 252 Y+ + +R+IS IE+L EMPR+L + A ++G N + + L++ +T Y+ LL Sbjct 175 YIKAIVERDVRDISSIEKLVEMPRLLEVLAQQSGKLTNFTQIGGQLNLDTKTAQKYVGLL 234 Query 253 EAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFV 312 E FL+H++ W N ++++ PK+ DSGL L VT ++++ G LLET+V Sbjct 235 ETLFLVHQLRPWHGNTLNRIVKTPKIHFIDSGLLACLNRVTIESIEQDKSSFGALLETWV 294 Query 313 ANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRY 372 +E+ K T + E +++++RD+ EVD +LE+ ++ GIEVKA+ T +D RGLR Sbjct 295 YSELLKMCTLANEPWNIYYYRDKDQVEVDFILENHARKIIGIEVKASQTILNQDFRGLRK 354 Query 373 LAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTL 408 LA D + G++L + + FG L A+P S L Sbjct 355 LASLADKNWVSGIVLYSGDKCLSFGDNLWAIPFSLL 390 >gi|336118315|ref|YP_004573084.1| hypothetical protein MLP_26670 [Microlunatus phosphovorus NM-1] gi|334686096|dbj|BAK35681.1| hypothetical protein MLP_26670 [Microlunatus phosphovorus NM-1] Length=420 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 177/397 (45%), Positives = 231/397 (59%), Gaps = 8/397 (2%) Query 20 PVVVVNGARQVGKTTLVARLDYPGS---SEVVSLDDVANRDAARDDPRAFVSR-PVDTLV 75 PVVVV GARQVGK+TL L GS + ++LDD R AA++DP+AFV++ P LV Sbjct 23 PVVVVEGARQVGKSTLATML-VEGSERAARYLTLDDDVLRAAAQNDPQAFVNQLPDGMLV 81 Query 76 IDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQG 135 IDE Q P L IKA +DR R PGRFLLTGSA LL D+L GR + L SQG Sbjct 82 IDEIQRAPELLLPIKASIDRHRTPGRFLLTGSADLLRLERTPDSLAGRAVTLPLRTLSQG 141 Query 136 ERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSRRRAWFDNYLT 195 E G D FV S + R D +R+A GG+P++ RSP R AWFD Y+ Sbjct 142 EINGRLDDFVTRFVAGVDPFDVRSTVSREDYANRLAAGGYPEVFRRSPRLRTAWFDGYVD 201 Query 196 TATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPARTTAGYLALLEAA 255 Q R++ + + VLRL AA EL + L+ D ++P T + YL L+E Sbjct 202 RIVQRDARDVRRLVDGNRLASVLRLVAANQAGELVRARLSRDANVPETTMSAYLDLVETL 261 Query 256 FLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVT---GATLDRPGRPLGPLLETFV 312 +L+ R+ W NL+ + + K +++DS LA HL GVT A L G LG LLE FV Sbjct 262 YLVERIRPWPGNLTTRQTGKAKGIITDSALAMHLSGVTPARAAALVGGGELLGHLLEGFV 321 Query 313 ANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRY 372 +E+RKQ TWS R S++H+R+ G EVD++LE DGR+ G+EVKA T E RGLR Sbjct 322 VSELRKQQTWSDTRFSVFHYRETSGLEVDVLLELDDGRILGLEVKAKQTYMPEHFRGLRR 381 Query 373 LAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 LA+RL DRF GV+L A + FG L LP+++LW Sbjct 382 LADRLGDRFLGGVVLGTADQGVRFGENLVGLPIASLW 418 >gi|158522965|ref|YP_001530835.1| AAA family ATPase [Desulfococcus oleovorans Hxd3] gi|158511791|gb|ABW68758.1| ATPase, AAA+ superfamily [Desulfococcus oleovorans Hxd3] Length=416 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 172/405 (43%), Positives = 240/405 (60%), Gaps = 1/405 (0%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R + P V ALAD+PVV+++G RQ GKTTL + +S D+ R AA DP Sbjct 9 RFLIPRVTEALADSPVVLIHGPRQSGKTTLARLVGDAAGYVYISFDNDVQRAAAEFDPVG 68 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 FV+ D +++DE Q PGLF ++KA VD R+ GRF+LTGSA +L P +AD+L GR+E Sbjct 69 FVADLPDKVILDEIQRVPGLFTSLKAAVDSRRQAGRFILTGSANVLLVPKLADSLAGRME 128 Query 126 IIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSR 185 I+ L P +Q E AG GF+ L + + DL +RIA GGFP +AR+ SR Sbjct 129 ILRLHPLAQCELAGRDSGFLSILLGQGFKKSSIGSRQGRDLAERIAAGGFPAALARTASR 188 Query 186 RRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPART 244 RRA W+ +Y+ T Q +R++S I L +PR+L L A +T +NV+ L+ + T Sbjct 189 RRAAWYRDYIDTLVQRDVRDLSAIRSLEALPRLLALAAGQTAHLVNVAELSGPFQLSRPT 248 Query 245 TAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPL 304 Y+ LLE FL+ ++P W N ++I+ PKL + D+GLAC LLGV G +L Sbjct 249 IRDYMTLLERLFLLEQLPPWHNNRLSRLIKTPKLHLCDTGLACALLGVDGPSLWGDRELY 308 Query 305 GPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRA 364 G LLETFV E+R+Q W E + +H+RD+ G EVD+VLE ++ G+EVKA+ST A Sbjct 309 GQLLETFVYQELRRQSGWQEEPVTFYHYRDKEGLEVDVVLEFGGRQLAGVEVKASSTVGA 368 Query 365 EDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 D RGL L + + RF+ GV+L FG L A+P+S LW Sbjct 369 SDFRGLIRLQKSVGKRFEAGVVLYDGDAIVSFGKGLFAVPISMLW 413 >gi|119356615|ref|YP_911259.1| AAA family ATPase [Chlorobium phaeobacteroides DSM 266] gi|119353964|gb|ABL64835.1| ATPase (AAA+ superfamily) [Chlorobium phaeobacteroides DSM 266] Length=412 Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 159/406 (40%), Positives = 239/406 (59%), Gaps = 4/406 (0%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R I + AL+DTPVV+V G RQ GKTTLV ++ G ++LDD +AR+DP Sbjct 9 RLIEMRIAEALSDTPVVLVAGPRQAGKTTLVRQMAIEGM-RYLTLDDELTLLSARNDPVG 67 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 + R +D VIDE Q P L AIK VD DRRPGRFLLTGSA +++ P +AD+L GR+E Sbjct 68 MI-RSLDRAVIDEIQRAPQLLLAIKKSVDDDRRPGRFLLTGSANVMALPAVADSLAGRME 126 Query 126 IIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSR 185 + L P SQ E G ++DA F A R L + +LV+ + GG+P+ ++R+ R Sbjct 127 TLTLLPLSQSELHGSTANWIDAAF-AGRLLKVTMPVTGEELVEIVLRGGYPEAISRTDVR 185 Query 186 RRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPART 244 RR W YL Q +R+++ I++L ++PR LR+ A +G N + L + + + ++T Sbjct 186 RRTVWVRQYLNAIIQRDVRDVASIDKLDQLPRFLRILAEISGQMCNYTNLGSQVGLDSKT 245 Query 245 TAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPL 304 + Y +LE +L+ R+ W+ N +++I+ PKL D+GL LL + + + Sbjct 246 ASRYTGVLEQMYLLKRIEVWARNRLKRIIKTPKLQFIDAGLLATLLDLGATEVQQDRSRF 305 Query 305 GPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRA 364 G +LETFV E+ K + + + L ++RD EVD+V+E+ G++ G+EVKA++T A Sbjct 306 GKILETFVYGELLKHSSTAEDDYKLLYYRDFDMFEVDVVIENASGQLIGVEVKASATVNA 365 Query 365 EDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 DLRGL+ LA D F+ G+LL E P G + A+P+STLW Sbjct 366 GDLRGLKKLASVAGDLFKMGILLYDGTETMPLGDGMWAVPLSTLWG 411 >gi|209547117|ref|YP_002279035.1| hypothetical protein Rleg2_5079 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538361|gb|ACI58295.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length=417 Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 170/409 (42%), Positives = 232/409 (57%), Gaps = 5/409 (1%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 ++ER P V ALADT VV++ G RQ GKTTL AR ++LDDV +AAR D Sbjct 10 LIERKARPIVETALADTRVVLIAGPRQAGKTTL-ARQVSGSDRPFITLDDVGTLNAARTD 68 Query 63 PRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVG 122 P F+ R + VIDE Q P L AIK VDRD PGRFLLTGSA L + P +AD+L G Sbjct 69 PIGFI-RGIKRAVIDEVQRAPELILAIKESVDRDDEPGRFLLTGSANLATVPVIADSLAG 127 Query 123 RVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRAD-LVDRIATGGFPDIVAR 181 R+ ++ L PF+Q E +D LF A E G D D L+ + GG+P+ + R Sbjct 128 RMAVVPLLPFAQSEIQSTPGRLLDRLF-AGEEPSAGEDTVIGDDLLLTVLRGGYPEALRR 186 Query 182 S-PSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI 240 S P RR AW ++Y+ +R+I+ I++L +PR+L + A G +N S+ L + Sbjct 187 STPGRRTAWLEDYVKLILDRDVRDIANIDQLDRLPRLLDVLAEHAGQLVNHSSFGATLGL 246 Query 241 PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP 300 + T Y+A+LE FLI + WS N ++++ PKL DSGL L L Sbjct 247 SSITAQKYVAILERLFLIRTLVPWSNNRLNRLVKTPKLHFLDSGLLATLREDEADALRDN 306 Query 301 GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS 360 G LLE+FV +E+ K +WS R S H+R R EVD+++E GRV GIEVKA++ Sbjct 307 KTRFGALLESFVVSELLKLASWSDRRLSFSHYRTRDQDEVDVIIEDRRGRVVGIEVKASA 366 Query 361 TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 T +++D RGLR L + + DRF G++L TPFG L A P+S LW Sbjct 367 TVKSDDFRGLRQLQDAVGDRFVRGLVLHDHDRVTPFGEKLQAAPLSLLW 415 >gi|120537108|ref|YP_957165.1| AAA family ATPase [Marinobacter aquaeolei VT8] gi|120326943|gb|ABM21250.1| ATPase, AAA+ superfamily [Marinobacter aquaeolei VT8] Length=412 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 160/406 (40%), Positives = 228/406 (57%), Gaps = 8/406 (1%) Query 11 SVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSE---VVSLDDVANRDAARDDPRAFV 67 +V AL+DTPVV V G RQ GKTTLV L SE ++LDD A + A+ DP FV Sbjct 9 NVKEALSDTPVVFVMGPRQAGKTTLVKSLIMDMGSENWTYITLDDQAQFEIAQADPVGFV 68 Query 68 -SRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEI 126 + P + +DE Q P LF +IK VD R PGRFLLTGSA L P ++D+L GR+E Sbjct 69 RNLPSTRIALDEVQRLPELFVSIKQAVDEQRSPGRFLLTGSANALLLPRLSDSLAGRMES 128 Query 127 IELWPFSQGERAGIADGFVDALFTAPRELIHGSDMR-RADLVDRIATGGFPDIVARSPSR 185 + L S+ E G F+ L E D+R R L+ R+ TG FP+ + R+ R Sbjct 129 VRLMTLSECEIQGRQPSFLIKLLR--EEAPSTQDIRVRDHLLQRLVTGCFPEPLQRANER 186 Query 186 RR-AWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPART 244 RR AW+ Y +T Q IR+++ I+ M ++L+L A G +N++ L L + T Sbjct 187 RRQAWYQQYTSTLIQRDIRDLTHIDHPDLMAKLLKLTAFYAGKLVNLTELGGKLGLDRLT 246 Query 245 TAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPL 304 Y+ALLE FL+ ++PAW +N +++++ PKL D+G+ C + G+ L + Sbjct 247 IKKYMALLEQLFLVEQLPAWHSNEYKRLVKTPKLHPVDTGMMCAVRGLNQERLLKQPGDF 306 Query 305 GPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRA 364 G +LE+FV NE+RKQ W E + +H+RD+ EVD+V+E+ G IE+KA +T Sbjct 307 GLVLESFVYNELRKQSVWIDEPLNFYHYRDKDKVEVDVVIENTMGDCFAIEIKAAATLNT 366 Query 365 EDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 +D GL+ DRF+ GVLL T FG L A+PV LW+ Sbjct 367 KDFTGLKRFQSVAGDRFKIGVLLYDGDHTTAFGDNLYAVPVGALWS 412 >gi|307947366|ref|ZP_07662700.1| AAA family ATPase [Roseibium sp. TrichSKD4] gi|307769508|gb|EFO28735.1| AAA family ATPase [Roseibium sp. TrichSKD4] Length=408 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 155/416 (38%), Positives = 240/416 (58%), Gaps = 18/416 (4%) Query 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVV---SLDDVANRDAA 59 + R V AL+DT VV+++G RQ GKTTL + +SE V +LDD +A Sbjct 1 MYSRFAKAKVEEALSDTRVVLISGPRQSGKTTLATEI----ASEKVPFLTLDDANVLRSA 56 Query 60 RDDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADA 119 DDP FV R +D VIDE Q P L AIK VD D+ GRFLLTGSA L++ P +AD+ Sbjct 57 IDDPVGFV-RGLDRAVIDEVQRAPDLLLAIKNLVDDDKTSGRFLLTGSANLMTIPKVADS 115 Query 120 LVGRVEIIELWPFSQGERAGIADGFVDALFTAPR----ELIHGSDMRRADLVDRIATGGF 175 L GR+E++ L+P SQ E G F+D F +++ G D LV+ + +GG+ Sbjct 116 LAGRMEVVRLFPLSQAEIFGTKTRFIDEAFAGETPNAGQMVLGDD-----LVENVLSGGY 170 Query 176 PDIVARSP-SRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSAL 234 P+ + R+ +R++ W+ +Y+ Q +++++ IE+LA MP+++ A G +N S + Sbjct 171 PEALGRTRWTRKQDWYHSYVDAIVQRDVQDVAQIEQLAIMPKLMSALAEHAGQLVNYSGI 230 Query 235 ANDLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTG 294 L++ TT Y+++ E+ +L+H + W TN +++ + PKL D+GL + ++ Sbjct 231 GAGLNLNHVTTRKYVSVFESLYLVHTLQPWFTNRLKRLTKSPKLHFLDAGLLAAMRDISP 290 Query 295 ATLDRPGRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGI 354 + + G +LETFV +E+RK +WS +R + HFRD+ EVD+VLE+ G V GI Sbjct 291 DVVRKDKTSFGAILETFVFSELRKIASWSEQRCTFSHFRDKDKNEVDIVLENRRGEVVGI 350 Query 355 EVKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 EVK+++T A D G+R LAE +F G++L + PFG + A P+S LW Sbjct 351 EVKSSATVSAADFSGMRKLAEACGKKFIQGMVLYDHDKVVPFGENMFAAPLSCLWG 406 >gi|251771011|gb|EES51595.1| ATPase (AAA+ superfamily)-like protein [Leptospirillum ferrodiazotrophum] Length=418 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 160/406 (40%), Positives = 222/406 (55%), Gaps = 3/406 (0%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R A + AL DTPVV++ G RQ GK+TLV + ++LDD +A+ DP Sbjct 12 RFSADRIKTALKDTPVVLLIGPRQAGKSTLVQQFSRGDDRTYLTLDDQNVLLSAQRDPEG 71 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 +S L IDE Q P L IK VD+DRRPGRFLLTGSA +L+ P ++++L GR+E Sbjct 72 LLS-SRQRLTIDEIQRAPDLLLTIKKSVDQDRRPGRFLLTGSADILTLPTVSESLAGRME 130 Query 126 IIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARS-PS 184 II L P S E A F+ F I D + + + + TGG+P+I+ R+ P Sbjct 131 IISLLPLSHAEIAAAPPSFLKLAFEGRLPEISTGDGGTS-IRESVLTGGYPEILTRTDPE 189 Query 185 RRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPART 244 RR W +YL + EIS IE+ + R+ RL +R+G N + L + +T Sbjct 190 RRMRWAKSYLDALFSRDVGEISGIEKHETLSRLFRLVVSRSGQIPNFTQWGGTLGLNDKT 249 Query 245 TAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPL 304 T Y+ LLE FL+HR+ W TNLS ++++ PK+ DSGL + G+T LDR Sbjct 250 TKRYVFLLEQLFLVHRLEPWQTNLSSRILKSPKIYALDSGLQSLVTGLTREKLDRDRSLY 309 Query 305 GPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRA 364 G LLETFV +EI+KQ W +E L H+RD+ EVDL+ E GR+ IE+KA+ T Sbjct 310 GSLLETFVVSEIKKQSEWYSESLFLSHYRDKEHNEVDLLCEDRSGRIVAIEIKASMTVTP 369 Query 365 EDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 DLRG++ L E L +R ++L P G + PVS LW Sbjct 370 ADLRGIKKLREILGERLVLALVLHEGTRTLPLGDNIFTAPVSILWG 415 >gi|194335302|ref|YP_002017096.1| ATPase [Pelodictyon phaeoclathratiforme BU-1] gi|194307779|gb|ACF42479.1| ATPase (AAA+ superfamily) [Pelodictyon phaeoclathratiforme BU-1] Length=412 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 160/406 (40%), Positives = 235/406 (58%), Gaps = 4/406 (0%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R I + ALADTPVV+V G RQ GKTTLV ++ G ++LDD +AR+DP Sbjct 9 RLIEMRIAEALADTPVVLVAGPRQAGKTTLVRQMAIEGM-RYLTLDDELTLLSARNDPVG 67 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 + R +D VIDE Q P L AIK VD DRRPGRFLLTGSA L+ P +AD+L GR+E Sbjct 68 MI-RSLDCAVIDEIQRAPQLLLAIKKSVDEDRRPGRFLLTGSANLMVLPAVADSLAGRME 126 Query 126 IIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVARSPSR 185 + L P SQ E G ++DA F A R L + +L + + GG+P+ ++R+ +R Sbjct 127 TLTLLPLSQSELHGSTANWIDAAF-AGRLLKVTMPVTGDELCEVVLRGGYPEAISRTDAR 185 Query 186 RRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPART 244 RR W YL Q +R+++ I++L ++PR LR+ A +G N + L + + ++T Sbjct 186 RRTVWARQYLNAIIQRDVRDVASIDKLDQLPRFLRILAEISGQMCNYTKLGGQVGLDSKT 245 Query 245 TAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPL 304 + Y +LE +L+ R+ W+ N ++V++ PKL D+GL LL + + + Sbjct 246 ASRYTGVLEQMYLLKRIEVWARNRLKRVVKTPKLQFIDAGLLATLLDLGATEVQQDRSRF 305 Query 305 GPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRA 364 G +LETFV +E+ K + + L ++RD EVD+V+E+ G++ G+EVKA++T A Sbjct 306 GKILETFVYSELLKHSSTAEGDYKLLYYRDLDMFEVDMVIENASGQLIGVEVKASATVNA 365 Query 365 EDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 DLRGL+ LA F+ G+LL E P G L A P+STLW Sbjct 366 GDLRGLKKLASVAGGLFKMGILLYDGTETMPLGDGLWAAPLSTLWG 411 >gi|116751278|ref|YP_847965.1| AAA family ATPase [Syntrophobacter fumaroxidans MPOB] gi|116700342|gb|ABK19530.1| ATPase, AAA+ superfamily [Syntrophobacter fumaroxidans MPOB] Length=415 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 171/409 (42%), Positives = 233/409 (57%), Gaps = 6/409 (1%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R + P + ALAD+PVV+++G RQ GKTTL + + DD R AA+ DP Sbjct 9 RFLRPRIEEALADSPVVLIHGPRQCGKTTLARLVGDDSGFATFTFDDDVQRAAAQADPVG 68 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 +V+ + V+DE Q P LF ++KA VD R+PGRF+LTGSA +L P +AD+L GR+E Sbjct 69 YVADLPERAVLDEVQRVPELFTSLKAAVDTRRKPGRFILTGSANVLLVPKLADSLAGRME 128 Query 126 IIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRR--ADLVDRIATGGFPDIVARSP 183 I+ L P SQ E F+ LF A L G RR L +R+ GGFP +AR+ Sbjct 129 ILRLHPLSQAEVERKTPDFLRRLFAAG--LKAGPSGRRLGKALSERVVGGGFPAALARAN 186 Query 184 SRRR-AWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPA 242 RRR AW+ +Y T Q IR+++ I L +PR+L L A +T +NVS LA I Sbjct 187 QRRRTAWYRDYGDTLIQRDIRDLARISALDALPRLLALAAGQTACLMNVSELAAPFQISR 246 Query 243 RTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGR 302 +T YL LL FL+ + W N +++++ PKL + D+GLAC LLG+ G TL Sbjct 247 QTIREYLTLLSRIFLLDELSPWHGNRMKRLVKTPKLHMGDTGLACALLGLNGDTLWADRS 306 Query 303 PLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTP 362 G LLETFV E+R+ +W + HFRD+ EVD+VLE +GRV G+EVKA ST Sbjct 307 LFGRLLETFVYQELRRHASWREVAVAFSHFRDKDQVEVDVVLE-SEGRVAGVEVKAASTV 365 Query 363 RAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 +D +GLR L + + F GV+L FG L A+P+S LW G Sbjct 366 TGDDFKGLRKLRDAVQKNFAAGVVLYDGDAVAGFGDRLHAVPISQLWEG 414 >gi|344199315|ref|YP_004783641.1| AAA family ATPase [Acidithiobacillus ferrivorans SS3] gi|343774759|gb|AEM47315.1| AAA family ATPase [Acidithiobacillus ferrivorans SS3] Length=413 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 166/406 (41%), Positives = 239/406 (59%), Gaps = 4/406 (0%) Query 6 RAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRA 65 R + P ++ A+ADTPVV+++G RQ GK+TL ++ +S DD R +A+ DP Sbjct 9 RFLQPRLIEAMADTPVVLIHGPRQCGKSTLARQVGDAAGYTYLSFDDDVQRASAQADPIG 68 Query 66 FVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVE 125 +V+ D +V+DE Q P LF ++KA VD R+PGRF+LTGSA +L P +AD+L GR++ Sbjct 69 YVADLPDKVVLDEVQRVPNLFTSLKAAVDARRQPGRFILTGSANVLLVPKLADSLAGRMD 128 Query 126 IIELWPFSQGERAGIADGFVDALF-TAPRELIHGSDMRRADLVDRIATGGFPDIVARSPS 184 I+ L P +Q E AG A F+ LF A + G + + L +R+A GG+P +AR+ + Sbjct 129 ILRLHPLAQAELAGTAPNFLSTLFGNAFKTGACGQRLGKM-LAERVAAGGYPAALARATA 187 Query 185 RRR-AWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIPAR 243 RRR +W+ NY T Q +R+++ I L +PR+L L A ++ LNV+ LA + Sbjct 188 RRRASWYRNYADTLVQRDVRDLARIHALEALPRLLTLAAGQSARLLNVADLAAPFQLSRP 247 Query 244 TTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRP 303 T Y+ LL FL+ +P W +N ++I+ PKL + D+GLAC LLGV A L Sbjct 248 TIRDYMTLLARVFLLEELPPWHSNRLSRLIKTPKLHLGDTGLACALLGVDAAALWDDRAL 307 Query 304 LGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPR 363 G LLETFV E+R+ +W E + HFRD+ GAEVD+VLE G++ G+EVKA +T Sbjct 308 YGQLLETFVYQELRRHASWRDEPVTFHHFRDKDGAEVDIVLE-SGGKLAGVEVKAAATVT 366 Query 364 AEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLW 409 A D +GL L F GV+L FG L A+P+S LW Sbjct 367 AADFKGLHQLESATKTCFVGGVVLYDGDAVASFGKGLYAVPLSCLW 412 >gi|111222751|ref|YP_713545.1| hypothetical protein FRAAL3336 [Frankia alni ACN14a] gi|111150283|emb|CAJ61980.1| conserved hypothetical protein [Frankia alni ACN14a] Length=425 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 166/419 (40%), Positives = 237/419 (57%), Gaps = 11/419 (2%) Query 2 GVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARD 61 G+V R +AP V LA+ PVV++ G R VGK+TL+ L +E++ LDD+A+RDAA Sbjct 7 GLVPRRLAPIVAGRLAEEPVVLLQGPRSVGKSTLLRGLAADLGAELIDLDDLASRDAAAR 66 Query 62 DPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALV 121 DP FV+ + IDE Q P + AIKAE++RD RPGRF+LTGSAR + P A AL Sbjct 67 DPALFVT-GAGPVCIDEYQHVPIILDAIKAELNRDGRPGRFVLTGSARHEALPRAAQALT 125 Query 122 GRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMR-----RADLVDRIATGGFP 176 GR+ + ++P SQGE G+ + +D LFT P + + R R + +D + GGFP Sbjct 126 GRLHRLPVYPLSQGEVRGVHEHLLDDLFTDPATAVTAAAARPSATTREEYIDSVTAGGFP 185 Query 177 DIVAR-SPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALA 235 ++AR S + R W D+Y++ + + +R++S I + A +P +L A +T LN++ A Sbjct 186 SVLARTSLASRNRWLDDYVSLSLERDVRDLSRIRQAAALPALLERLAGQTAQILNITRAA 245 Query 236 NDLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGA 295 + +T Y+ LLEA FL++R+PAW T L+ + PK+ V DSG+A LL +T Sbjct 246 ASARLDEKTAHSYVRLLEAVFLLYRLPAWGTTLTTRSTASPKVHVLDSGVAARLLRLTPQ 305 Query 296 TLDRPG----RPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRV 351 L G LLETFV E+ KQ +W+ + H+R R G EVDLV+E DG + Sbjct 306 KLAARNPTALTEFGHLLETFVVTELLKQASWADWVSGVGHWRTRDGDEVDLVVERDDGSI 365 Query 352 CGIEVKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWA 410 EVKA +DL LR L + D F GV L + F L +PV T+WA Sbjct 366 VAFEVKAAGRVPGDDLAPLRKLRDAAGDAFVAGVALYLGARSYTFEDRLHVMPVDTIWA 424 Lambda K H 0.321 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 822404616408 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40