BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0600c
Length=168
Score E
Sequences producing significant alignments: (Bits) Value
gi|57996832|emb|CAI45378.1| artificial two-component regulatory ... 333 5e-90
gi|15840003|ref|NP_335040.1| sensor histidine kinase [Mycobacter... 331 2e-89
gi|289552853|ref|ZP_06442063.1| two component system sensor kina... 331 2e-89
gi|289573200|ref|ZP_06453427.1| two component system sensor kina... 329 9e-89
gi|31791782|ref|NP_854275.1| two component sensor kinase [Mycoba... 326 7e-88
gi|288918431|ref|ZP_06412783.1| histidine kinase [Frankia sp. EU... 105 3e-21
gi|320335460|ref|YP_004172171.1| integral membrane sensor signal... 97.8 5e-19
gi|297565508|ref|YP_003684480.1| integral membrane sensor signal... 95.9 2e-18
gi|334135103|ref|ZP_08508604.1| ATPase/histidine kinase/DNA gyra... 95.9 2e-18
gi|297565187|ref|YP_003684159.1| integral membrane sensor signal... 93.2 1e-17
gi|145593183|ref|YP_001157480.1| integral membrane sensor signal... 92.0 2e-17
gi|328949556|ref|YP_004366891.1| integral membrane sensor signal... 92.0 3e-17
gi|337744803|ref|YP_004638965.1| two-component sensor histidine ... 91.3 5e-17
gi|297201978|ref|ZP_06919375.1| two-component system sensor kina... 90.1 9e-17
gi|320333504|ref|YP_004170215.1| integral membrane sensor signal... 90.1 9e-17
gi|162449526|ref|YP_001611893.1| protein kinase [Sorangium cellu... 89.7 1e-16
gi|212638881|ref|YP_002315401.1| Redox sensor histidine kinase R... 89.7 1e-16
gi|297197901|ref|ZP_06915298.1| two-component system sensor kina... 89.0 2e-16
gi|239820126|ref|YP_002947311.1| histidine kinase [Variovorax pa... 88.6 3e-16
gi|302036901|ref|YP_003797223.1| putative sensor histidine kinas... 88.2 4e-16
gi|291619549|ref|YP_003522291.1| BaeS [Pantoea ananatis LMG 2010... 88.2 4e-16
gi|284041698|ref|YP_003392038.1| integral membrane sensor signal... 87.8 4e-16
gi|258516237|ref|YP_003192459.1| histidine kinase [Desulfotomacu... 87.8 5e-16
gi|159038627|ref|YP_001537880.1| histidine kinase [Salinispora a... 87.4 7e-16
gi|312197789|ref|YP_004017850.1| integral membrane sensor signal... 87.0 8e-16
gi|308185492|ref|YP_003929624.1| two-component system sensor pro... 87.0 8e-16
gi|319796314|ref|YP_004157954.1| osmosensitive k channel signal ... 87.0 8e-16
gi|242240537|ref|YP_002988718.1| histidine kinase [Dickeya dadan... 87.0 9e-16
gi|297192481|ref|ZP_06909879.1| two-component system sensor kina... 86.7 1e-15
gi|147676371|ref|YP_001210586.1| membrane-associated sensory his... 86.7 1e-15
gi|91775008|ref|YP_544764.1| histidine kinase [Methylobacillus f... 86.7 1e-15
gi|322833002|ref|YP_004213029.1| integral membrane sensor signal... 86.7 1e-15
gi|297158052|gb|ADI07764.1| two-component system sensor kinase [... 86.3 1e-15
gi|300716332|ref|YP_003741135.1| Sensor protein [Erwinia billing... 85.9 2e-15
gi|229587825|ref|YP_002869944.1| osmolarity-sensing histidine-ki... 85.9 2e-15
gi|295094340|emb|CBK83431.1| Signal transduction histidine kinas... 85.9 2e-15
gi|170783569|ref|YP_001740086.1| signal transduction histidine k... 85.5 2e-15
gi|44888877|gb|AAS48176.1| Osmolarity-sensing histidine-kinase [... 85.1 3e-15
gi|157146700|ref|YP_001454019.1| sensor protein KdpD [Citrobacte... 84.7 4e-15
gi|294630729|ref|ZP_06709289.1| signal transduction histidine ki... 84.7 4e-15
gi|209520040|ref|ZP_03268817.1| integral membrane sensor signal ... 84.7 4e-15
gi|156936561|ref|YP_001440475.1| hypothetical protein ESA_pESA3p... 84.3 5e-15
gi|300920764|ref|ZP_07137168.1| histidine kinase KdpD [Escherich... 84.0 7e-15
gi|218549738|ref|YP_002383529.1| sensor protein KdpD [Escherichi... 83.6 8e-15
gi|325498138|gb|EGC95997.1| sensor protein KdpD [Escherichia fer... 83.6 9e-15
gi|288919563|ref|ZP_06413893.1| histidine kinase [Frankia sp. EU... 83.6 1e-14
gi|296159567|ref|ZP_06842391.1| integral membrane sensor signal ... 83.2 1e-14
gi|157373308|ref|YP_001471908.1| osmolarity sensor protein [Shew... 83.2 1e-14
gi|86741096|ref|YP_481496.1| periplasmic sensor signal transduct... 83.2 1e-14
gi|295838625|ref|ZP_06825558.1| signal transduction histidine-pr... 83.2 1e-14
>gi|57996832|emb|CAI45378.1| artificial two-component regulatory system sensor kinase [Mycobacterium
tuberculosis H37Rv]
Length=363
Score = 333 bits (854), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 60
VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT
Sbjct 196 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 255
Query 61 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 120
AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH
Sbjct 256 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 315
Query 121 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 168
ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ
Sbjct 316 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 363
>gi|15840003|ref|NP_335040.1| sensor histidine kinase [Mycobacterium tuberculosis CDC1551]
gi|148821803|ref|YP_001286557.1| two component sensor kinase [Mycobacterium tuberculosis F11]
gi|253797535|ref|YP_003030536.1| two component system sensor kinase [Mycobacterium tuberculosis
KZN 1435]
15 more sequence titles
Length=377
Score = 331 bits (848), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 60
VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT
Sbjct 210 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 269
Query 61 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 120
AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH
Sbjct 270 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 329
Query 121 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 168
ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ
Sbjct 330 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 377
>gi|289552853|ref|ZP_06442063.1| two component system sensor kinase [Mycobacterium tuberculosis
KZN 605]
gi|289437485|gb|EFD19978.1| two component system sensor kinase [Mycobacterium tuberculosis
KZN 605]
Length=373
Score = 331 bits (848), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 60
VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT
Sbjct 206 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 265
Query 61 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 120
AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH
Sbjct 266 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 325
Query 121 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 168
ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ
Sbjct 326 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 373
>gi|289573200|ref|ZP_06453427.1| two component system sensor kinase [Mycobacterium tuberculosis
K85]
gi|289537631|gb|EFD42209.1| two component system sensor kinase [Mycobacterium tuberculosis
K85]
Length=377
Score = 329 bits (843), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 167/168 (99%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 60
VPITPLLHESVARFAATGADITTRAEPDLFVSIDPD+LRRILTAVLDNAITHGDGEIAVT
Sbjct 210 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDYLRRILTAVLDNAITHGDGEIAVT 269
Query 61 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 120
AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH
Sbjct 270 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 329
Query 121 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 168
ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ
Sbjct 330 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 377
>gi|31791782|ref|NP_854275.1| two component sensor kinase [Mycobacterium bovis AF2122/97]
gi|57116758|ref|NP_215114.2| two component sensor kinase [Mycobacterium tuberculosis H37Rv]
gi|121636518|ref|YP_976741.1| putative two component sensor kinase [Mycobacterium bovis BCG
str. Pasteur 1173P2]
40 more sequence titles
Length=168
Score = 326 bits (836), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 167/168 (99%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 60
+PITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT
Sbjct 1 MPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 60
Query 61 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 120
AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH
Sbjct 61 AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH 120
Query 121 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 168
ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ
Sbjct 121 ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ 168
>gi|288918431|ref|ZP_06412783.1| histidine kinase [Frankia sp. EUN1f]
gi|288350194|gb|EFC84419.1| histidine kinase [Frankia sp. EUN1f]
Length=509
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 85/132 (65%), Gaps = 8/132 (6%)
Query 20 DITTRAEPDLFVSID--PDHLRRILTAVLDNAITHG--DGEIAVTAHARDG--AVDIGVR 73
D+T R + D +++D PD LR+ + +L NAI H + V AH +G AV + VR
Sbjct 344 DVTIRTDADRTLTVDAEPDLLRQAVDNLLANAIRHAPPGTAVEVRAHPAEGGAAVAVQVR 403
Query 74 DHGPGFADHFLPVAFDRFTRADTARGGR--GSGLGLAIVAALTTTHGGHANATNHPDGGA 131
DHGPGF FLP AF+RF R+D+AR G+GLGLAIVAA H G A A+NHPDGGA
Sbjct 404 DHGPGFPPDFLPHAFERFRRSDSARTRDHGGTGLGLAIVAATAHAHHGTATASNHPDGGA 463
Query 132 ELRITLPTPRPP 143
+ +TLPT +PP
Sbjct 464 VVAVTLPTSQPP 475
>gi|320335460|ref|YP_004172171.1| integral membrane sensor signal transduction histidine kinase
[Deinococcus maricopensis DSM 21211]
gi|319756749|gb|ADV68506.1| integral membrane sensor signal transduction histidine kinase
[Deinococcus maricopensis DSM 21211]
Length=406
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/132 (47%), Positives = 73/132 (56%), Gaps = 6/132 (4%)
Query 18 GADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGD-GEIAVTAHARDGAVDIGVRDHG 76
G D+ A FV DPD LR+IL +LDNA + G + + A D + VRDHG
Sbjct 274 GLDLHVDAPAPAFVRADPDRLRQILHNLLDNAARYAAPGRVDLRVRALDLRAHLHVRDHG 333
Query 77 PGFADHFLPVAFDRFTRADTAR-----GGRGSGLGLAIVAALTTTHGGHANATNHPDGGA 131
PGF + L AF+RF RAD +R G GSGLGLAI AL GG +A NHPDGGA
Sbjct 334 PGFREEDLARAFERFYRADASRTRSADGHAGSGLGLAIARALAQAQGGTLDARNHPDGGA 393
Query 132 ELRITLPTPRPP 143
E +T P P
Sbjct 394 EFTVTFPLTAAP 405
>gi|297565508|ref|YP_003684480.1| integral membrane sensor signal transduction histidine kinase
[Meiothermus silvanus DSM 9946]
gi|296849957|gb|ADH62972.1| integral membrane sensor signal transduction histidine kinase
[Meiothermus silvanus DSM 9946]
Length=425
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/145 (41%), Positives = 75/145 (52%), Gaps = 9/145 (6%)
Query 3 ITPLLHESVARFAATGADITTRAE-----PDLFVSIDPDHLRRILTAVLDNAITH--GDG 55
+ ++ +VA F D + + P L V DPD L +I++ +L NA+ H G
Sbjct 275 LCAVVQHTVAGFQGQAQDKGIKLQLRLPSPPLEVEADPDRLTQIISNLLHNAVAHTPAGG 334
Query 56 EIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGR--GSGLGLAIVAAL 113
I V AR V + V D GPG + LP FDRF RA+ +R + GSGLGLAIV AL
Sbjct 335 TITVEVEARGKEVAVRVSDTGPGIPEEALPRVFDRFFRAEASRSRQSGGSGLGLAIVKAL 394
Query 114 TTTHGGHANATNHPDGGAELRITLP 138
HGG A N GGAE R LP
Sbjct 395 VELHGGMVEAKNRSSGGAEFRFLLP 419
>gi|334135103|ref|ZP_08508604.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Paenibacillus
sp. HGF7]
gi|333607605|gb|EGL18918.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Paenibacillus
sp. HGF7]
Length=376
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/152 (39%), Positives = 83/152 (55%), Gaps = 10/152 (6%)
Query 1 VPITPLLHESVARFAATGADITTRAEPD----LFVSIDPDHLRRILTAVLDNAITHG--D 54
VP+ ++ + A +A + R D +++ DPD L +IL +L NA+T+ D
Sbjct 211 VPLNNVMEKVKAFMSAAFLEKRIRFTVDAPRSVYLDADPDRLTQILVNLLSNALTYTPPD 270
Query 55 GEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGR--GSGLGLAIVAA 112
GE+A+ V I V+D GPG + LP F+RF R D +R R GSGLGLAIV+
Sbjct 271 GEVALKGRRAGDKVLITVKDTGPGIRESDLPYIFERFYRGDKSRNRRSGGSGLGLAIVSK 330
Query 113 LTTTHGGHANATNHPDGGAELRITLPTPRPPF 144
L HGG +A N +GGA R+TL +PP
Sbjct 331 LVQAHGGRISAAN--EGGAVFRVTLSAAQPPL 360
>gi|297565187|ref|YP_003684159.1| integral membrane sensor signal transduction histidine kinase
[Meiothermus silvanus DSM 9946]
gi|296849636|gb|ADH62651.1| integral membrane sensor signal transduction histidine kinase
[Meiothermus silvanus DSM 9946]
Length=408
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 73/145 (51%), Gaps = 8/145 (5%)
Query 1 VPITPLLHESVARFAATGADITTRAE-----PDLFVSIDPDHLRRILTAVLDNAITHGDG 55
V + P L V FAA T E PDL + D + R+L +LDNA+ HG G
Sbjct 262 VSLAPFLRGVVEAFAARANGDGTGLELRGIPPDLEATFDRGQMTRVLNNLLDNAMRHGAG 321
Query 56 EIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGR---GSGLGLAIVAA 112
+ V A A+ V I VRDHGPG L F+RF + D +R + GSGLGL+I A
Sbjct 322 PVEVHAAAQPEGVKITVRDHGPGIPPEALERVFERFYKTDASRTRKESEGSGLGLSIARA 381
Query 113 LTTTHGGHANATNHPDGGAELRITL 137
+ HGG NHP GGA + L
Sbjct 382 IVEAHGGRLEVANHPQGGAVFNVFL 406
>gi|145593183|ref|YP_001157480.1| integral membrane sensor signal transduction histidine kinase
[Salinispora tropica CNB-440]
gi|145302520|gb|ABP53102.1| integral membrane sensor signal transduction histidine kinase
[Salinispora tropica CNB-440]
Length=369
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/130 (43%), Positives = 73/130 (57%), Gaps = 4/130 (3%)
Query 13 RFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGA--VDI 70
R+A G + + P V +DP + ++L +LDNA+ H VT H GA V++
Sbjct 233 RYAGKGVTLRSDLRPSPQVDVDPQRMGQVLGNLLDNALRHTPEGGTVTVHVIGGARSVEL 292
Query 71 GVRDHGPGFADHFLPVAFDRFTRADTAR--GGRGSGLGLAIVAALTTTHGGHANATNHPD 128
V D GPG LP F+RF R DTAR G GSG+GLAIV A+ + HGG A N P
Sbjct 293 AVADTGPGIPAQHLPHIFERFYRVDTARDRGNGGSGIGLAIVRAVVSAHGGRVRAENVPG 352
Query 129 GGAELRITLP 138
GGA +++ LP
Sbjct 353 GGAMVKVVLP 362
>gi|328949556|ref|YP_004366891.1| integral membrane sensor signal transduction histidine kinase
[Marinithermus hydrothermalis DSM 14884]
gi|328449880|gb|AEB10781.1| integral membrane sensor signal transduction histidine kinase
[Marinithermus hydrothermalis DSM 14884]
Length=373
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/138 (46%), Positives = 76/138 (56%), Gaps = 10/138 (7%)
Query 13 RFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITH--GDGEIAVTAHARDGAVDI 70
R AA G + A P + V DP LR++L +LDNA+ H G IAV HA +GA +
Sbjct 234 RAAAKGVRLVVTAAP-VTVHADPGRLRQVLLNLLDNALRHTPAGGCIAVGVHA-EGAAVL 291
Query 71 GVRDHGPGFADHFLPVAFDRFTRADTARGGR--GSGLGLAIVAALTTTHGGHANATNHPD 128
V D GPG + P F+RF R D AR GSG+GLAIV AL HGG A N P+
Sbjct 292 EVADTGPGIPEAHRPHVFERFYRPDPARSRAFGGSGIGLAIVKALVEAHGGRVEAMNRPE 351
Query 129 GGAELRITLPT----PRP 142
GGA R+ LP PRP
Sbjct 352 GGAVFRVRLPISGSPPRP 369
>gi|337744803|ref|YP_004638965.1| two-component sensor histidine kinase [Paenibacillus mucilaginosus
KNP414]
gi|336295992|gb|AEI39095.1| two-component sensor histidine kinase [Paenibacillus mucilaginosus
KNP414]
Length=498
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/143 (37%), Positives = 73/143 (52%), Gaps = 11/143 (7%)
Query 1 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHG---DGEI 57
+ + P + E RF A P ++V D + L R+L ++DNA+ H ++
Sbjct 354 LKVDPRMREMQVRFEAVETG------PRVWVQADREKLGRVLMNIVDNAVKHAREPQAQL 407
Query 58 AVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGR--GSGLGLAIVAALTT 115
+ A DG ++ + D+GPG LP FDRF RAD +R GSGLGLAIV +
Sbjct 408 QIALRAEDGEAELTLEDNGPGIEPQALPWVFDRFYRADLSRRTDTGGSGLGLAIVKGIVE 467
Query 116 THGGHANATNHPDGGAELRITLP 138
HGG A + PD G + ITLP
Sbjct 468 EHGGRVRAESGPDRGTAIVITLP 490
>gi|297201978|ref|ZP_06919375.1| two-component system sensor kinase [Streptomyces sviceus ATCC
29083]
gi|197712641|gb|EDY56675.1| two-component system sensor kinase [Streptomyces sviceus ATCC
29083]
Length=525
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/132 (41%), Positives = 67/132 (51%), Gaps = 1/132 (0%)
Query 25 AEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFL 84
AE + +DP L IL ++ NA+ HG + V A D V IGVRDHGPG + L
Sbjct 386 AERGIHARLDPRRLDVILANLIGNALKHGGSPVRVAVRAADDEVVIGVRDHGPGIPEDVL 445
Query 85 PVAFDRFTRADTAR-GGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPP 143
P FDRF +A +R GSGLGL+I HGG A N PDGGA + +P
Sbjct 446 PHVFDRFYKASASRPRSEGSGLGLSIALENAHIHGGEITAANSPDGGAVFTLRIPRDASE 505
Query 144 FHEELPRITSSD 155
E+L +D
Sbjct 506 LAEQLMEAKKAD 517
>gi|320333504|ref|YP_004170215.1| integral membrane sensor signal transduction histidine kinase
[Deinococcus maricopensis DSM 21211]
gi|319754793|gb|ADV66550.1| integral membrane sensor signal transduction histidine kinase
[Deinococcus maricopensis DSM 21211]
Length=418
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/110 (50%), Positives = 64/110 (59%), Gaps = 4/110 (3%)
Query 34 DPDHLRRILTAVLDNAITHG--DGEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRF 91
D D L + L +LDNA+ H G + ++ A AV VRD G GF + P FDRF
Sbjct 298 DRDRLAQALGNLLDNALRHTPDAGVVQLSVRAEADAVTFAVRDSGAGFPEDAAPRLFDRF 357
Query 92 TRADTAR--GGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPT 139
R AR GSGLGLAIV A+T HGGH A NHPDGGAE +TLP+
Sbjct 358 YRVHGARDRATGGSGLGLAIVQAITALHGGHVTARNHPDGGAEFTLTLPS 407
>gi|162449526|ref|YP_001611893.1| protein kinase [Sorangium cellulosum 'So ce 56']
gi|161160108|emb|CAN91413.1| Protein kinase [Sorangium cellulosum 'So ce 56']
Length=1693
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (37%), Positives = 75/138 (55%), Gaps = 1/138 (0%)
Query 6 LLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGE-IAVTAHAR 64
+L R A +G+ ++ RAEP + S D L ++++ +LDNA+ G G+ I V+ +
Sbjct 1541 VLERLTERIAHSGSSVSVRAEPSVVGSWDRSRLEQVVSNLLDNALKFGAGKPIEVSVARK 1600
Query 65 DGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANAT 124
DG ++ V+D G G LP FDRF RA ++R G GLGL +V ++ GG
Sbjct 1601 DGTAELVVQDQGIGIPAGRLPHVFDRFERAVSSRHFGGLGLGLHVVKSIVEALGGAVRVV 1660
Query 125 NHPDGGAELRITLPTPRP 142
+ PD GA + LP RP
Sbjct 1661 SRPDEGARFTVELPCERP 1678
>gi|212638881|ref|YP_002315401.1| Redox sensor histidine kinase ResE [Anoxybacillus flavithermus
WK1]
gi|212560361|gb|ACJ33416.1| Redox sensor histidine kinase ResE [Anoxybacillus flavithermus
WK1]
Length=587
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/146 (36%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query 1 VPITPLLHESVARFAA----TGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGD-- 54
VP+ P + + +F A G + +L VS DPD + ++LT ++DNA+ H D
Sbjct 440 VPLKPYVERIIHKFQALAKEKGVHLLVEMNDELIVSFDPDRVEQVLTNLIDNALRHTDEG 499
Query 55 GEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTA--RGGRGSGLGLAIVAA 112
GE+ V A + V I V+D G G + LP F+RF +AD A RG G+GLGLAI
Sbjct 500 GEVRVIVDADEEVVRISVQDSGSGIPEEDLPFVFERFYKADKARTRGRSGTGLGLAIAKN 559
Query 113 LTTTHGGHANATNHPDGGAELRITLP 138
+ H G + G TLP
Sbjct 560 IVEAHKGTITVHSKLGEGTTFTFTLP 585
>gi|297197901|ref|ZP_06915298.1| two-component system sensor kinase [Streptomyces sviceus ATCC
29083]
gi|197717156|gb|EDY61190.1| two-component system sensor kinase [Streptomyces sviceus ATCC
29083]
Length=518
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/119 (45%), Positives = 65/119 (55%), Gaps = 1/119 (0%)
Query 32 SIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRF 91
S+DP L ++ ++ NA+ HG + V A D I VRD GPG H LP F+RF
Sbjct 399 SVDPRRLDVVVANLVGNALKHGGRPVRVRLSAGDAVAVIEVRDSGPGIPAHVLPHVFERF 458
Query 92 TRADTAR-GGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPPFHEELP 149
++DTAR GSGLGLAI A HGG +A NHP GGA + LP R EE P
Sbjct 459 YKSDTARIRSEGSGLGLAITAENVRIHGGTVHAANHPAGGAVFTVELPLRRDESPEENP 517
>gi|239820126|ref|YP_002947311.1| histidine kinase [Variovorax paradoxus S110]
gi|239804979|gb|ACS22045.1| histidine kinase [Variovorax paradoxus S110]
Length=542
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/122 (42%), Positives = 66/122 (55%), Gaps = 6/122 (4%)
Query 29 LFVSIDPDHLRRILTAVLDNAITHG--DGEIAVTAHARDGAVDIGVRDHGPGFADHFLPV 86
+ V D D LR+ + VLDNAI + DG++ + H V I VRDHG G + LP
Sbjct 415 VMVRADGDRLRQAVMIVLDNAIRYSRPDGKVRLGCHVAADEVAIVVRDHGIGIGEDELPR 474
Query 87 AFDRFTRADTARGGR--GSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPPF 144
F+RF R AR R GSG+GL+I A+ H GH + P+ G E+RI L R P
Sbjct 475 VFERFVRGQRARAHRADGSGIGLSIAQAIVKAHRGHIEIQSWPEEGTEVRIVL--ARLPI 532
Query 145 HE 146
HE
Sbjct 533 HE 534
>gi|302036901|ref|YP_003797223.1| putative sensor histidine kinase CusS [Candidatus Nitrospira
defluvii]
gi|300604965|emb|CBK41298.1| putative Sensor histidine kinase CusS [Candidatus Nitrospira
defluvii]
Length=481
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/151 (36%), Positives = 72/151 (48%), Gaps = 8/151 (5%)
Query 1 VPITPLLHESVARFAATGAD----ITTRAEPDLFVSIDPDHLRRILTAVLDNAITHG--D 54
V + PLL E + D + P +S D L++ L +LDN++ +
Sbjct 325 VELEPLLQELIIELKLLADDRRISLALEVVPVPTISADAQWLKQALINLLDNSLKYTPPG 384
Query 55 GEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGR--GSGLGLAIVAA 112
G + V DG+++I VRD GPG +P FDRF RAD AR G+GLGLAIV
Sbjct 385 GSVTVRLRRSDGSLEIAVRDTGPGIEAEHVPFLFDRFYRADKARARESGGTGLGLAIVKG 444
Query 113 LTTTHGGHANATNHPDGGAELRITLPTPRPP 143
+ HGG P G+E I LP R P
Sbjct 445 IVEAHGGTVAVDTQPGKGSEFTIRLPLGRAP 475
>gi|291619549|ref|YP_003522291.1| BaeS [Pantoea ananatis LMG 20103]
gi|291154579|gb|ADD79163.1| BaeS [Pantoea ananatis LMG 20103]
gi|327396460|dbj|BAK13881.1| sensor protein BaeS [Pantoea ananatis AJ13355]
Length=395
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/103 (45%), Positives = 68/103 (67%), Gaps = 4/103 (3%)
Query 40 RILTAVLDNAITHG-DGE-IAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTA 97
+++T +++NA+ + +G+ I++ AHA D A+ + RD+GPG FL V FDRFTRAD++
Sbjct 285 QVITILMENALRYAAEGKRISIDAHASDSAITLQFRDYGPGVDPQFLSVIFDRFTRADSS 344
Query 98 RG--GRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLP 138
R GSGLGL+I A+ HGG A+ P+GG + ITLP
Sbjct 345 RARHSGGSGLGLSIAKAIVEAHGGAIRASLPPEGGLHIMITLP 387
>gi|284041698|ref|YP_003392038.1| integral membrane sensor signal transduction histidine kinase
[Conexibacter woesei DSM 14684]
gi|283945919|gb|ADB48663.1| integral membrane sensor signal transduction histidine kinase
[Conexibacter woesei DSM 14684]
Length=482
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/135 (43%), Positives = 75/135 (56%), Gaps = 3/135 (2%)
Query 6 LLHESVARFAATGADITTRAE-PDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHAR 64
L+ E+V R D T R + + V P L R + +LDNA+ HG + +V R
Sbjct 350 LVGEAVERARRHAPDATFRLDASESLVRAAPGRLHRAVGNLLDNAVKHGGADGSVDVCVR 409
Query 65 DGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANAT 124
G ++ VRDHGPG A LP FDRF RA ARG G+GLGLAIV + HGG A
Sbjct 410 GG--EVRVRDHGPGIAPEDLPHVFDRFYRARRARGLPGAGLGLAIVRQVAEAHGGSVRAE 467
Query 125 NHPDGGAELRITLPT 139
+ DGGA L ++LP+
Sbjct 468 SPDDGGARLVLSLPS 482
>gi|258516237|ref|YP_003192459.1| histidine kinase [Desulfotomaculum acetoxidans DSM 771]
gi|257779942|gb|ACV63836.1| histidine kinase [Desulfotomaculum acetoxidans DSM 771]
Length=496
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/115 (39%), Positives = 64/115 (56%), Gaps = 4/115 (3%)
Query 31 VSIDPDHLRRILTAVLDNAITH--GDGEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAF 88
V DPD L ++ ++DNA+ H GE+ +++ V + V+D GPG + LP+ +
Sbjct 377 VYADPDRLEQVFVNLIDNALRHTPAGGEVKISSALETDKVFVTVKDSGPGISSKDLPLIW 436
Query 89 DRFTRADTAR--GGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPR 141
+RF + D AR GG GSGLGLAI A+ HGG T+ P G + + LP R
Sbjct 437 ERFYKVDKARSRGGEGSGLGLAITKAIIDAHGGWVEVTSEPGRGTVMTVCLPVFR 491
>gi|159038627|ref|YP_001537880.1| histidine kinase [Salinispora arenicola CNS-205]
gi|157917462|gb|ABV98889.1| histidine kinase [Salinispora arenicola CNS-205]
Length=369
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/130 (41%), Positives = 71/130 (55%), Gaps = 4/130 (3%)
Query 13 RFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGA--VDI 70
R+A G + + P V +DP + ++L +LDNA+ H VT H GA V++
Sbjct 233 RYAGKGVTLRSDLRPSPQVDVDPQRMGQVLGNLLDNALRHTPEGGTVTVHVIGGARSVEL 292
Query 71 GVRDHGPGFADHFLPVAFDRFTRADTARG--GRGSGLGLAIVAALTTTHGGHANATNHPD 128
V D GPG LP F+RF R DTAR GSG+GLAIV A+ + HGG A N P
Sbjct 293 AVADTGPGIPAQHLPHVFERFYRVDTARDRDNGGSGIGLAIVRAVVSAHGGRVRADNVPG 352
Query 129 GGAELRITLP 138
GG +++ LP
Sbjct 353 GGTMVKVVLP 362
>gi|312197789|ref|YP_004017850.1| integral membrane sensor signal transduction histidine kinase
[Frankia sp. EuI1c]
gi|311229125|gb|ADP81980.1| integral membrane sensor signal transduction histidine kinase
[Frankia sp. EuI1c]
Length=466
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/123 (50%), Positives = 71/123 (58%), Gaps = 13/123 (10%)
Query 34 DPDHLRRILTAVLDNAI--THGDGEIAVTAHARDG---------AVDIGVRDHGPGFADH 82
DPD LR+ + +L NA+ T G I VTA G AV I VRD GPGF
Sbjct 340 DPDRLRQAVDNLLSNAVRFTKPGGLIEVTAKRVPGDPAGGLDRPAVTITVRDRGPGFPQE 399
Query 83 FLPVAFDRFTRADTARGGR--GSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTP 140
FLP AF+RF RAD ARG G+GLGLAIVAA+ H G A NHP+GGA + + LP
Sbjct 400 FLPQAFERFARADPARGRADGGAGLGLAIVAAVAAAHDGRATVANHPEGGAVVTLVLPAV 459
Query 141 RPP 143
PP
Sbjct 460 SPP 462
>gi|308185492|ref|YP_003929624.1| two-component system sensor protein [Pantoea vagans C9-1]
gi|308055772|gb|ADO07942.1| two-component system sensor protein [Pantoea vagans C9-1]
Length=389
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/126 (41%), Positives = 71/126 (57%), Gaps = 4/126 (3%)
Query 17 TGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHG--DGEIAVTAHARDGAVDIGVRD 74
+G I+ A DL + D L +++T + +NA+ + G + +TA D A + RD
Sbjct 262 SGVVISVMAPGDLLLCADTFRLGQVITIICENALRYAADGGALLITASQNDKATTLTFRD 321
Query 75 HGPGFADHFLPVAFDRFTRADTARG--GRGSGLGLAIVAALTTTHGGHANATNHPDGGAE 132
+G G FLP FDRFTRAD++R GSGLGL+I A+ HGG +AT DGG
Sbjct 322 YGQGVEPDFLPQLFDRFTRADSSRARHSGGSGLGLSIAKAIIEAHGGSLHATLPADGGLL 381
Query 133 LRITLP 138
+ ITLP
Sbjct 382 IGITLP 387
>gi|319796314|ref|YP_004157954.1| osmosensitive k channel signal transduction histidine kinase
[Variovorax paradoxus EPS]
gi|315598777|gb|ADU39843.1| osmosensitive K channel signal transduction histidine kinase
[Variovorax paradoxus EPS]
Length=915
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/129 (42%), Positives = 67/129 (52%), Gaps = 4/129 (3%)
Query 19 ADITTRAEPDL-FVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGP 77
A + T + DL V D + R+L +L+NA +G I V A A G + + VRDHGP
Sbjct 780 AVVQTTLDADLPLVEFDAVLIERVLVNLLENATKYGAPPIVVGARAEPGTLVLTVRDHGP 839
Query 78 GFADHFL---PVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELR 134
G L FD+FTR + G GLGLAI A+ + HGG A N DGGAE
Sbjct 840 GLPAALLGHEQKLFDKFTRGEAESATPGVGLGLAICRAVVSAHGGEITAANARDGGAEFT 899
Query 135 ITLPTPRPP 143
+TLP PP
Sbjct 900 VTLPRREPP 908
>gi|242240537|ref|YP_002988718.1| histidine kinase [Dickeya dadantii Ech703]
gi|242132594|gb|ACS86896.1| histidine kinase [Dickeya dadantii Ech703]
Length=402
Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/109 (42%), Positives = 66/109 (61%), Gaps = 4/109 (3%)
Query 34 DPDHLRRILTAVLDNAITHG-DGE-IAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRF 91
DP L ++ T +++NA+ + +G+ + + DG + RD+G G ++ FLP F+RF
Sbjct 283 DPVRLGQVFTILMENALRYAAEGKRLDIALERTDGNWTVAFRDYGAGVSETFLPKIFERF 342
Query 92 TRADTARG--GRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLP 138
+RADT+R GSGLGL+I A+ HGG NA NHP GG +TLP
Sbjct 343 SRADTSRARHSGGSGLGLSIALAICEAHGGTLNAQNHPQGGMLFTVTLP 391
>gi|297192481|ref|ZP_06909879.1| two-component system sensor kinase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151374|gb|EFH31121.1| two-component system sensor kinase [Streptomyces pristinaespiralis
ATCC 25486]
Length=557
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/115 (43%), Positives = 63/115 (55%), Gaps = 1/115 (0%)
Query 25 AEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFL 84
AE + +DP L IL ++ NA+ HG + V+ DG + I VRDHGPG + L
Sbjct 400 AERGIMARLDPRRLDVILANLIGNALKHGGSPVRVSVRPVDGELVIEVRDHGPGIPEEVL 459
Query 85 PVAFDRFTRADTAR-GGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLP 138
P FDRF +A +R GSGLGL+I HGG A N P+GGA +TLP
Sbjct 460 PHVFDRFYKASASRPRSEGSGLGLSIAMENAHIHGGDITAANSPEGGAVFVLTLP 514
>gi|147676371|ref|YP_001210586.1| membrane-associated sensory histidine kinase [Pelotomaculum thermopropionicum
SI]
gi|146272468|dbj|BAF58217.1| hypothetical membrane-associated sensory histidine kinase [Pelotomaculum
thermopropionicum SI]
Length=478
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/136 (34%), Positives = 71/136 (53%), Gaps = 5/136 (3%)
Query 9 ESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGD---GEIAVTAHARD 65
E R A +++ + EP + D + +++++ + NA+ H D G I ++ D
Sbjct 343 EPQLRILAGNRELSLQIEPGVVCRYDVNKMKQVILNLFHNAVQHTDPEGGCIRLSLSRVD 402
Query 66 GAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGR--GSGLGLAIVAALTTTHGGHANA 123
G V + V+D+GPG + +LP FDRF R D +R + GSGLGLAI A+ HGG +
Sbjct 403 GGVRLSVQDNGPGIGEEYLPHIFDRFYRIDVSRARKYGGSGLGLAITKAIVDIHGGVISV 462
Query 124 TNHPDGGAELRITLPT 139
+ P G I LP
Sbjct 463 ESKPGEGCTFHIWLPV 478
>gi|91775008|ref|YP_544764.1| histidine kinase [Methylobacillus flagellatus KT]
gi|91708995|gb|ABE48923.1| histidine kinase [Methylobacillus flagellatus KT]
Length=442
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/137 (37%), Positives = 68/137 (50%), Gaps = 1/137 (0%)
Query 3 ITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAH 62
+ LL R G +T P + + P ++R+LT ++DNA +G GE+ VT
Sbjct 284 LNALLTSVADRHTRAGRKLTMSLAPTHLIPLRPLAMQRLLTNLIDNAFAYGGGEVTVTTR 343
Query 63 ARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGR-GSGLGLAIVAALTTTHGGHA 121
G + + V D+GPG + F R DTARG + GSGLGLAI + H G
Sbjct 344 ITAGNIILSVLDNGPGIPAAQMERLLRPFERLDTARGNKSGSGLGLAIADRIAKLHKGQL 403
Query 122 NATNHPDGGAELRITLP 138
N P GG E R+TLP
Sbjct 404 TLLNRPQGGLEARLTLP 420
>gi|322833002|ref|YP_004213029.1| integral membrane sensor signal transduction histidine kinase
[Rahnella sp. Y9602]
gi|321168203|gb|ADW73902.1| integral membrane sensor signal transduction histidine kinase
[Rahnella sp. Y9602]
Length=394
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/111 (41%), Positives = 65/111 (59%), Gaps = 4/111 (3%)
Query 34 DPDHLRRILTAVLDNAITHGDG--EIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRF 91
DP L ++ T +++NA+ + + + R+G DI RD GPG D FLPV F+RF
Sbjct 280 DPFRLGQVFTILMENALRYAQEGRRLDIAIAPRNGGYDITFRDKGPGVDDSFLPVMFERF 339
Query 92 TRADTARG--GRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTP 140
+RAD++R GSGLGL+I A+ HGG +AT GG + ++LP P
Sbjct 340 SRADSSRARHSGGSGLGLSIARAICEAHGGGIHATKQTQGGLMVTVSLPLP 390
>gi|297158052|gb|ADI07764.1| two-component system sensor kinase [Streptomyces bingchenggensis
BCW-1]
Length=524
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/115 (43%), Positives = 62/115 (54%), Gaps = 1/115 (0%)
Query 25 AEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFL 84
AE + +DP L IL ++ NA+ HG + V+ D + I VRDHGPG + L
Sbjct 360 AERGIMARLDPRRLDVILANLIGNALKHGGSPVRVSVRPEDDDLLIRVRDHGPGIPEDVL 419
Query 85 PVAFDRFTRADTAR-GGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLP 138
P FDRF +A +R GSGLGL+I HGG A NHPDGGA + LP
Sbjct 420 PHVFDRFYKASASRPRSEGSGLGLSIALENAHIHGGEITADNHPDGGAVFTLRLP 474
>gi|300716332|ref|YP_003741135.1| Sensor protein [Erwinia billingiae Eb661]
gi|299062168|emb|CAX59284.1| Sensor protein [Erwinia billingiae Eb661]
Length=395
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/147 (39%), Positives = 78/147 (54%), Gaps = 8/147 (5%)
Query 3 ITPLLHESVARFA----ATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHG-DGE- 56
IT LLHE A G I R + ++ D L ++ T V++NA+ + +G
Sbjct 244 ITELLHERANWLTPQAEALGMAIVIREQAPRMITGDAFRLAQVFTIVMENALRYAAEGRR 303
Query 57 IAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARG--GRGSGLGLAIVAALT 114
++V ++ I +D GPG A+ FLP FDRFTRAD++R GSGLGL+I A+
Sbjct 304 LSVWLESQGDRQSICFKDRGPGVAEDFLPSLFDRFTRADSSRARHSGGSGLGLSIARAIC 363
Query 115 TTHGGHANATNHPDGGAELRITLPTPR 141
HGG AT DGG + + LPT R
Sbjct 364 LAHGGDVVATLPDDGGLLITVMLPTDR 390
>gi|229587825|ref|YP_002869944.1| osmolarity-sensing histidine-kinase [Pseudomonas fluorescens
SBW25]
gi|229359691|emb|CAY46539.1| osmolarity-sensing histidine-kinase [Pseudomonas fluorescens
SBW25]
Length=437
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/142 (37%), Positives = 76/142 (54%), Gaps = 4/142 (2%)
Query 1 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 60
V +T L+ E VA + G + R EP ++ ++R+L ++ NA+ H ++ V
Sbjct 286 VDLTDLVREVVAPYNQNGEQVRMRLEPIQPFALRRVSMKRLLNNLIGNALHHAGSDVEVA 345
Query 61 AHAR-DGA---VDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTT 116
A+ D A V + V D G G L F+ FTR D ARGG+G+GLGLAIV + +
Sbjct 346 AYVSGDSAAPYVVLSVMDRGAGIDPDELEGIFNPFTRGDRARGGKGTGLGLAIVRRIASM 405
Query 117 HGGHANATNHPDGGAELRITLP 138
HGG+ N +GG E R+ LP
Sbjct 406 HGGNVELRNREEGGLEARVRLP 427
>gi|295094340|emb|CBK83431.1| Signal transduction histidine kinase [Coprococcus sp. ART55/1]
Length=566
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/145 (36%), Positives = 73/145 (51%), Gaps = 9/145 (6%)
Query 26 EPDLFVSIDPDHLRRILTAVLDNAITHGD---GEIAVTAHARDGAVDIGVRDHGPGFADH 82
+ D+ V +DPD L+R++ ++ NAI + D G+I + + D V + + D+G G
Sbjct 387 DDDVKVIVDPDQLKRVINNIITNAIKYTDKEYGQIDINIYDNDAEVKVSISDNGRGIDSE 446
Query 83 FLPVAFDRFTRADTARGGR-GSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPR 141
LP FDR RAD+AR R GSGLGLAI + HGG+ AT+ G + TL
Sbjct 447 SLPHIFDRMYRADSARQSRGGSGLGLAICKKIVEEHGGNIYATSQLGVGTTIVFTLKKYI 506
Query 142 PPFHEELPRITSSDTKDPNREHDTS 166
P E DT D + E +
Sbjct 507 PKVEE-----IEGDTSDASGEQQAN 526
>gi|170783569|ref|YP_001740086.1| signal transduction histidine kinase [Arthrobacter sp. Chr15]
gi|150035077|gb|ABR67073.1| signal transduction histidine kinase [Arthrobacter sp. Chr15]
Length=454
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/145 (42%), Positives = 74/145 (52%), Gaps = 7/145 (4%)
Query 7 LHESVARFAATGADITTRAEP--DLFVSIDPDHLRRILTAVLDNAITHGDGEIAV---TA 61
L AR+ A R + L I+ D L R + ++DNA+ HG I + TA
Sbjct 304 LEAVAARYLALAGKEGLRVQCPVGLMAQINRDDLERAVGNLVDNALVHGKPPITIVGRTA 363
Query 62 HARDG--AVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGG 119
G V + VRD G G FLP FDRFTRAD+AR G+GLGLAI +AL + G
Sbjct 364 AESQGRAMVAVEVRDSGAGIDPGFLPHIFDRFTRADSARSVGGAGLGLAITSALAHRNRG 423
Query 120 HANATNHPDGGAELRITLPTPRPPF 144
A A NHP GGA L + LP P
Sbjct 424 QAVAGNHPGGGAVLTLLLPVADAPV 448
>gi|44888877|gb|AAS48176.1| Osmolarity-sensing histidine-kinase [Pseudomonas fluorescens]
Length=437
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/142 (36%), Positives = 75/142 (53%), Gaps = 4/142 (2%)
Query 1 VPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT 60
V +T L+ E VA + G + R EP ++ ++R+L ++ NA+ H ++ V
Sbjct 286 VDLTDLVREVVAPYNQNGEQVRMRLEPIQPFALRRVSMKRLLNNLIGNALHHAGSDVEVA 345
Query 61 AHARDGA----VDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTT 116
A+ + V + V D G G L F+ FTR D ARGG+G+GLGLAIV + +
Sbjct 346 AYVSGDSTAPYVVLSVMDRGTGIDPAELEGIFNPFTRGDRARGGKGTGLGLAIVRRIASM 405
Query 117 HGGHANATNHPDGGAELRITLP 138
HGG+ N +GG E R+ LP
Sbjct 406 HGGNVELRNREEGGLEARVRLP 427
>gi|157146700|ref|YP_001454019.1| sensor protein KdpD [Citrobacter koseri ATCC BAA-895]
gi|157083905|gb|ABV13583.1| hypothetical protein CKO_02466 [Citrobacter koseri ATCC BAA-895]
Length=895
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/128 (38%), Positives = 65/128 (51%), Gaps = 6/128 (4%)
Query 27 PDLFVSIDPDHLRRILTAVLDNAITHG--DGEIAVTAHARDGAVDIGVRDHGPGFADHFL 84
P V +D R+L +L+NA+ + EI + AH D + + V D+GPG D
Sbjct 768 PMTLVHVDGPLFERVLINLLENAVKYAGSQAEIGIDAHVEDEHLQLDVWDNGPGIPDGQE 827
Query 85 PVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPP- 143
FD+F R + G GLGLAI A+ HGG +A N P GGA R+TLP P
Sbjct 828 KSIFDKFARGNKESAVPGVGLGLAICQAIVEVHGGTISAHNRPQGGACFRVTLPQETAPE 887
Query 144 ---FHEEL 148
FHE++
Sbjct 888 LEDFHEDM 895
>gi|294630729|ref|ZP_06709289.1| signal transduction histidine kinase [Streptomyces sp. e14]
gi|292834062|gb|EFF92411.1| signal transduction histidine kinase [Streptomyces sp. e14]
Length=484
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/135 (43%), Positives = 71/135 (53%), Gaps = 5/135 (3%)
Query 17 TGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDG-----EIAVTAHARDGAVDIG 71
TG DI RA D V P L+R L+ +++NA G EIAV+ AR G V +
Sbjct 342 TGRDIVVRASGDTSVDGRPGMLQRALSNLVENAAKFDRGGTAPIEIAVSGPARPGTVRVE 401
Query 72 VRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGA 131
V D GPG A+ L FDRF RA AR GSGLGL+IV + HGG A+ P GGA
Sbjct 402 VLDRGPGIAEGDLIRVFDRFYRAADARSLPGSGLGLSIVREVAMAHGGAPFASRRPGGGA 461
Query 132 ELRITLPTPRPPFHE 146
+ T+ R HE
Sbjct 462 VIGFTVGAERERGHE 476
>gi|209520040|ref|ZP_03268817.1| integral membrane sensor signal transduction histidine kinase
[Burkholderia sp. H160]
gi|209499525|gb|EDZ99603.1| integral membrane sensor signal transduction histidine kinase
[Burkholderia sp. H160]
Length=435
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/103 (46%), Positives = 57/103 (56%), Gaps = 1/103 (0%)
Query 38 LRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTA 97
L R++T ++DNA+ HG + ++ D I VRDHGPG D + A F R D A
Sbjct 328 LDRLVTNLVDNALEHGMPPVEISTTGNDSHWTISVRDHGPGIPDDRIAAAMKPFVRLDAA 387
Query 98 RGGRG-SGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPT 139
RGG G GLGLAIVA L GG NH GG E+RI LP
Sbjct 388 RGGEGHCGLGLAIVARLAHDRGGRCLVRNHAQGGLEVRIELPV 430
>gi|156936561|ref|YP_001440475.1| hypothetical protein ESA_pESA3p05442 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534815|gb|ABU79639.1| hypothetical protein ESA_pESA3p05442 [Cronobacter sakazakii ATCC
BAA-894]
Length=392
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/147 (37%), Positives = 75/147 (52%), Gaps = 8/147 (5%)
Query 1 VPITPLLHESVARFA----ATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGD-- 54
+ + LL E A A G + A P + DP L ++ T +++N + +G
Sbjct 241 ISLDELLRERAAWLKPQADAAGISVIIHAAPASPLYADPLRLGQVFTVLMENTLRYGKPG 300
Query 55 GEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARG--GRGSGLGLAIVAA 112
G + + HA I +D GPG A+ FLPV F+RFTRA+T+R GSGLGL+I A
Sbjct 301 GRLDIRLHATAEGYRIDFQDDGPGVAESFLPVMFERFTRAETSRARHSGGSGLGLSIARA 360
Query 113 LTTTHGGHANATNHPDGGAELRITLPT 139
+ HGG A GG + +TLPT
Sbjct 361 ICQAHGGDIQAALPEGGGLWIGVTLPT 387
>gi|300920764|ref|ZP_07137168.1| histidine kinase KdpD [Escherichia coli MS 115-1]
gi|300412265|gb|EFJ95575.1| histidine kinase KdpD [Escherichia coli MS 115-1]
Length=894
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/129 (37%), Positives = 65/129 (51%), Gaps = 6/129 (4%)
Query 26 EPDLFVSIDPDHLRRILTAVLDNAITHG--DGEIAVTAHARDGAVDIGVRDHGPGFADHF 83
EP + +D R+L +L+NA+ + EI + AH D + + V D+GPG
Sbjct 766 EPLTLIHVDGPLFERVLINLLENAVKYAGAQAEIGIDAHVEDENLQLDVWDNGPGLPPGQ 825
Query 84 LPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPP 143
FD+F R + G GLGLAI A+ HGG A N P+GGA R+TLP P
Sbjct 826 EQTIFDKFARGNKESAVPGVGLGLAICRAIVDVHGGTITAFNRPEGGACFRVTLPQQTAP 885
Query 144 ----FHEEL 148
FHE++
Sbjct 886 ELEDFHEDM 894
>gi|218549738|ref|YP_002383529.1| sensor protein KdpD [Escherichia fergusonii ATCC 35469]
gi|218357279|emb|CAQ89914.1| fused sensory histidine kinase in two-component regulatory system
with KdpE: signal sensing protein ; sensory histidine kinase
[Escherichia fergusonii ATCC 35469]
Length=894
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/129 (36%), Positives = 64/129 (50%), Gaps = 6/129 (4%)
Query 26 EPDLFVSIDPDHLRRILTAVLDNAITHG--DGEIAVTAHARDGAVDIGVRDHGPGFADHF 83
EP + +D R+L +L+NA+ + EI + AH + + V D+GPG
Sbjct 766 EPLTLIHVDGPLFERVLINLLENAVKYAGTQAEIGIDAHVEGENLQLDVWDNGPGLPQGL 825
Query 84 LPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPP 143
FD+F R + G GLGLAI A+ HGG A N P+GGA R+TLP P
Sbjct 826 EQAIFDKFARGNKESAVPGVGLGLAICRAIVDVHGGTITAFNRPEGGACFRVTLPQQTAP 885
Query 144 ----FHEEL 148
FHE++
Sbjct 886 ELEEFHEDM 894
>gi|325498138|gb|EGC95997.1| sensor protein KdpD [Escherichia fergusonii ECD227]
Length=894
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/129 (36%), Positives = 64/129 (50%), Gaps = 6/129 (4%)
Query 26 EPDLFVSIDPDHLRRILTAVLDNAITHG--DGEIAVTAHARDGAVDIGVRDHGPGFADHF 83
EP + +D R+L +L+NA+ + EI + AH + + V D+GPG
Sbjct 766 EPLTLIHVDGPLFERVLINLLENAVKYAGTQAEIGIDAHVEGENLQLDVWDNGPGLPQGL 825
Query 84 LPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPP 143
FD+F R + G GLGLAI A+ HGG A N P+GGA R+TLP P
Sbjct 826 EQAIFDKFARGNKESAVPGVGLGLAICRAIVDVHGGTITAFNRPEGGACFRVTLPQQTAP 885
Query 144 ----FHEEL 148
FHE++
Sbjct 886 ELEEFHEDM 894
>gi|288919563|ref|ZP_06413893.1| histidine kinase [Frankia sp. EUN1f]
gi|288349069|gb|EFC83316.1| histidine kinase [Frankia sp. EUN1f]
Length=652
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/124 (43%), Positives = 66/124 (54%), Gaps = 3/124 (2%)
Query 26 EPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFLP 85
EP + V+ P L R +T +LDNA+ V +R G ++ V D GPG A
Sbjct 377 EPSI-VAGRPGLLERAVTNLLDNAVKFSPASSTVWVASRRG--EVTVSDEGPGIAPSDRE 433
Query 86 VAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPPFH 145
F+RF RA +ARG GSGLGLAIVA HGG A P GGA +R+TLP P +
Sbjct 434 KVFERFYRAMSARGRPGSGLGLAIVADAVAMHGGTVRAEAAPSGGALMRMTLPLAAPGWS 493
Query 146 EELP 149
LP
Sbjct 494 AGLP 497
>gi|296159567|ref|ZP_06842391.1| integral membrane sensor signal transduction histidine kinase
[Burkholderia sp. Ch1-1]
gi|295890275|gb|EFG70069.1| integral membrane sensor signal transduction histidine kinase
[Burkholderia sp. Ch1-1]
Length=423
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/102 (48%), Positives = 58/102 (57%), Gaps = 1/102 (0%)
Query 38 LRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTA 97
L R++T ++DNA+ HG + + DG I VRDHGPG D + A F R D A
Sbjct 316 LDRLVTNLVDNALEHGAPPVDIGTARHDGHWVISVRDHGPGIPDGRIAAAMKPFVRLDAA 375
Query 98 RGGRG-SGLGLAIVAALTTTHGGHANATNHPDGGAELRITLP 138
RGG G GLGLAIVA L GG + NH GG E+RI LP
Sbjct 376 RGGEGHCGLGLAIVARLAHDRGGRCHVRNHAQGGLEVRIELP 417
>gi|157373308|ref|YP_001471908.1| osmolarity sensor protein [Shewanella sediminis HAW-EB3]
gi|157315682|gb|ABV34780.1| integral membrane sensor signal transduction histidine kinase
[Shewanella sediminis HAW-EB3]
Length=436
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/102 (40%), Positives = 59/102 (58%), Gaps = 0/102 (0%)
Query 38 LRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTA 97
++RIL+ +++NA +G G + +++H V V D GPG + +P F FT+ DTA
Sbjct 334 IKRILSNLVENAFRYGRGWVKLSSHFDGKRVGFSVEDDGPGIPEDQIPKLFQPFTQGDTA 393
Query 98 RGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPT 139
RG GSGLGLAI+ +T H G TN +GG ++ LP
Sbjct 394 RGSVGSGLGLAIIKRITDRHQGEVVLTNRAEGGLRAQVWLPM 435
>gi|86741096|ref|YP_481496.1| periplasmic sensor signal transduction histidine kinase [Frankia
sp. CcI3]
gi|86567958|gb|ABD11767.1| periplasmic sensor signal transduction histidine kinase [Frankia
sp. CcI3]
Length=551
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/138 (45%), Positives = 73/138 (53%), Gaps = 19/138 (13%)
Query 25 AEPDLFVSIDPDHLRRILTAVLDNAITHG-DGEIAVTAHAR------------DG---AV 68
A+ L V D D LRR + +L NA H G + R DG V
Sbjct 369 AQRPLEVLGDGDMLRRAVDNLLANAARHAPAGSVVELRGCRTPRRVVGPWVGVDGPGEVV 428
Query 69 DIGVRDHGPGFADHFLPVAFDRFTRADTARGGR--GSGLGLAIVAALTTTHGGHANATNH 126
+ +RD GPGF FLP F+RF RADTAR G+GLGLAIVAA+ + HGG A N
Sbjct 429 IVQIRDRGPGFPPEFLPYVFERFRRADTARTRDHGGAGLGLAIVAAIISAHGGTVEAANC 488
Query 127 PDGGAELRITLP-TPRPP 143
PDGGA + +TLP T PP
Sbjct 489 PDGGAVVTVTLPATAWPP 506
>gi|295838625|ref|ZP_06825558.1| signal transduction histidine-protein kinase afsQ2 [Streptomyces
sp. SPB74]
gi|295827101|gb|EFG65239.1| signal transduction histidine-protein kinase afsQ2 [Streptomyces
sp. SPB74]
Length=573
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/115 (42%), Positives = 62/115 (54%), Gaps = 1/115 (0%)
Query 25 AEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFADHFL 84
AE + +DP L IL ++ NA+ HG + V+ ++ I VRDHGPG + L
Sbjct 406 AERGITARVDPRRLDVILANLIGNALKHGGSPVRVSVRVEGPSLVIRVRDHGPGIPEDVL 465
Query 85 PVAFDRFTRADTAR-GGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLP 138
P FDRF +A +R GSGLGL+I A HGG A N PDGGA + LP
Sbjct 466 PHVFDRFYKASASRPRSEGSGLGLSIAQANAHIHGGDITAANSPDGGAVFTLRLP 520
Lambda K H
0.318 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130819067360
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40