BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0604 Length=316 Score E Sequences producing significant alignments: (Bits) Value gi|15607744|ref|NP_215118.1| lipoprotein lpqo [Mycobacterium tub... 630 1e-178 gi|31791786|ref|NP_854279.1| lipoprotein lpqo [Mycobacterium bov... 627 7e-178 gi|167969028|ref|ZP_02551305.1| lipoprotein lpqO [Mycobacterium ... 614 5e-174 gi|306783248|ref|ZP_07421570.1| lipoprotein lpqO [Mycobacterium ... 611 4e-173 gi|289446157|ref|ZP_06435901.1| lipoprotein lpqO [Mycobacterium ... 578 3e-163 gi|15842556|ref|NP_337593.1| hypothetical protein MT3078 [Mycoba... 330 3e-88 gi|15610136|ref|NP_217515.1| lipoprotein LppY [Mycobacterium tub... 330 3e-88 gi|31794176|ref|NP_856669.1| lipoprotein LppY [Mycobacterium bov... 329 3e-88 gi|148824189|ref|YP_001288943.1| lipoprotein lppY [Mycobacterium... 329 3e-88 gi|167967833|ref|ZP_02550110.1| hypothetical protein MtubH3_0729... 329 3e-88 gi|340627989|ref|YP_004746441.1| putative lipoprotein LPPY [Myco... 328 7e-88 gi|170783572|ref|YP_001740089.1| lipoprotein [Arthrobacter sp. C... 320 3e-85 gi|116662416|ref|YP_829469.1| protein of unknown function LppY a... 306 4e-81 gi|289752644|ref|ZP_06512022.1| LOW QUALITY PROTEIN: lipoprotein... 305 8e-81 gi|94970469|ref|YP_592517.1| protein of unknown function LppY an... 276 4e-72 gi|92117415|ref|YP_577144.1| protein of unknown function LppY an... 275 1e-71 gi|337767795|emb|CCB76506.1| conserved exported protein of unkno... 272 6e-71 gi|85715795|ref|ZP_01046774.1| hypothetical protein NB311A_13461... 266 2e-69 gi|27383178|ref|NP_774707.1| hypothetical protein bll8067 [Brady... 265 7e-69 gi|85717674|ref|ZP_01048611.1| LpqO protein-like [Nitrobacter sp... 265 8e-69 gi|337768783|emb|CCB77496.1| conserved exported protein of unkno... 264 2e-68 gi|254387982|ref|ZP_05003219.1| conserved hypothetical protein [... 263 2e-68 gi|345138082|dbj|BAK67691.1| hypothetical protein SLG_30160 [Sph... 263 3e-68 gi|326446146|ref|ZP_08220880.1| hypothetical protein SclaA2_3400... 263 4e-68 gi|182679065|ref|YP_001833211.1| hypothetical protein Bind_2102 ... 261 8e-68 gi|182679473|ref|YP_001833619.1| hypothetical protein Bind_2528 ... 261 1e-67 gi|111025515|ref|YP_707935.1| hypothetical protein RHA1_ro08733 ... 258 1e-66 gi|218532625|ref|YP_002423441.1| hypothetical protein Mchl_4739 ... 257 2e-66 gi|27378194|ref|NP_769723.1| hypothetical protein blr3083 [Brady... 257 2e-66 gi|188581147|ref|YP_001924592.1| hypothetical protein Mpop_1894 ... 256 4e-66 gi|337763068|emb|CCB71776.1| conserved exported protein of unkno... 254 1e-65 gi|148255054|ref|YP_001239639.1| hypothetical protein BBta_3649 ... 253 2e-65 gi|170744209|ref|YP_001772864.1| hypothetical protein M446_6160 ... 249 6e-64 gi|220922216|ref|YP_002497518.1| hypothetical protein Mnod_2235 ... 238 1e-60 gi|220914849|ref|YP_002490157.1| protein of unknown function Lpp... 237 2e-60 gi|289749101|ref|ZP_06508479.1| lipoprotein lpqO [Mycobacterium ... 232 5e-59 gi|289749102|ref|ZP_06508480.1| lipoprotein lpqO [Mycobacterium ... 231 8e-59 gi|339009511|ref|ZP_08642083.1| LysM domain protein [Brevibacill... 215 7e-54 gi|282163979|ref|YP_003356364.1| hypothetical protein MCP_1309 [... 201 1e-49 gi|153940690|ref|YP_001390103.1| LysM domain-containing protein ... 196 5e-48 gi|73669551|ref|YP_305566.1| hypothetical protein Mbar_A2052 [Me... 195 8e-48 gi|170754998|ref|YP_001780388.1| LysM domain-containing protein ... 191 9e-47 gi|148378747|ref|YP_001253288.1| LysM domain protein [Clostridiu... 191 1e-46 gi|282163980|ref|YP_003356365.1| hypothetical protein MCP_1310 [... 190 2e-46 gi|295133340|ref|YP_003584016.1| LppY/LpqO family protein [Zunon... 182 8e-44 gi|108760499|ref|YP_630020.1| LppY/LpqO family protein [Myxococc... 169 8e-40 gi|186473934|ref|YP_001861276.1| protein of unknown function Lpp... 168 9e-40 gi|85374994|ref|YP_459056.1| lipoprotein lpqo [Erythrobacter lit... 167 1e-39 gi|134288083|ref|YP_001110247.1| hypothetical protein Bcep1808_7... 166 4e-39 gi|323525653|ref|YP_004227806.1| hypothetical protein BC1001_130... 166 6e-39 >gi|15607744|ref|NP_215118.1| lipoprotein lpqo [Mycobacterium tuberculosis H37Rv] gi|15840005|ref|NP_335042.1| hypothetical protein MT0632 [Mycobacterium tuberculosis CDC1551] gi|148660374|ref|YP_001281897.1| putative lipoprotein LpqO [Mycobacterium tuberculosis H37Ra] 20 more sequence titles Length=316 Score = 630 bits (1624), Expect = 1e-178, Method: Compositional matrix adjust. Identities = 316/316 (100%), Positives = 316/316 (100%), Gaps = 0/316 (0%) Query 1 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT 60 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT Sbjct 1 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT 60 Query 61 GKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDEL 120 GKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDEL Sbjct 61 GKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDEL 120 Query 121 ASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPAS 180 ASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPAS Sbjct 121 ASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPAS 180 Query 181 ATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQ 240 ATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQ Sbjct 181 ATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQ 240 Query 241 PTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAV 300 PTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAV Sbjct 241 PTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAV 300 Query 301 ALARTLRAAVDATAAR 316 ALARTLRAAVDATAAR Sbjct 301 ALARTLRAAVDATAAR 316 >gi|31791786|ref|NP_854279.1| lipoprotein lpqo [Mycobacterium bovis AF2122/97] gi|121636522|ref|YP_976745.1| putative lipoprotein lpqO [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988994|ref|YP_002643681.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] 12 more sequence titles Length=316 Score = 627 bits (1617), Expect = 7e-178, Method: Compositional matrix adjust. Identities = 315/316 (99%), Positives = 315/316 (99%), Gaps = 0/316 (0%) Query 1 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT 60 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT Sbjct 1 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT 60 Query 61 GKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDEL 120 GKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDEL Sbjct 61 GKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDEL 120 Query 121 ASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPAS 180 ASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPA Sbjct 121 ASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPAP 180 Query 181 ATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQ 240 ATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQ Sbjct 181 ATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQ 240 Query 241 PTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAV 300 PTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAV Sbjct 241 PTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAV 300 Query 301 ALARTLRAAVDATAAR 316 ALARTLRAAVDATAAR Sbjct 301 ALARTLRAAVDATAAR 316 >gi|167969028|ref|ZP_02551305.1| lipoprotein lpqO [Mycobacterium tuberculosis H37Ra] gi|253797538|ref|YP_003030539.1| lipoprotein lpqO [Mycobacterium tuberculosis KZN 1435] gi|254230941|ref|ZP_04924268.1| lipoprotein lpqO [Mycobacterium tuberculosis C] 32 more sequence titles Length=308 Score = 614 bits (1584), Expect = 5e-174, Method: Compositional matrix adjust. Identities = 308/308 (100%), Positives = 308/308 (100%), Gaps = 0/308 (0%) Query 9 MAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSV 68 MAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSV Sbjct 1 MAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSV 60 Query 69 YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQ 128 YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQ Sbjct 61 YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQ 120 Query 129 AGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQTSL 188 AGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQTSL Sbjct 121 AGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQTSL 180 Query 189 DLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAA 248 DLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAA Sbjct 181 DLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAA 240 Query 249 INGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRA 308 INGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRA Sbjct 241 INGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRA 300 Query 309 AVDATAAR 316 AVDATAAR Sbjct 301 AVDATAAR 308 >gi|306783248|ref|ZP_07421570.1| lipoprotein lpqO [Mycobacterium tuberculosis SUMu003] gi|308331911|gb|EFP20762.1| lipoprotein lpqO [Mycobacterium tuberculosis SUMu003] Length=308 Score = 611 bits (1576), Expect = 4e-173, Method: Compositional matrix adjust. Identities = 307/308 (99%), Positives = 307/308 (99%), Gaps = 0/308 (0%) Query 9 MAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSV 68 MAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSV Sbjct 1 MAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSV 60 Query 69 YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQ 128 YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQ Sbjct 61 YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQ 120 Query 129 AGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQTSL 188 AGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQTSL Sbjct 121 AGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQTSL 180 Query 189 DLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAA 248 DLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPS GLATALNFQPTGNGRAA Sbjct 181 DLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSTGLATALNFQPTGNGRAA 240 Query 249 INGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRA 308 INGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRA Sbjct 241 INGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRA 300 Query 309 AVDATAAR 316 AVDATAAR Sbjct 301 AVDATAAR 308 >gi|289446157|ref|ZP_06435901.1| lipoprotein lpqO [Mycobacterium tuberculosis CPHL_A] gi|289419115|gb|EFD16316.1| lipoprotein lpqO [Mycobacterium tuberculosis CPHL_A] Length=309 Score = 578 bits (1491), Expect = 3e-163, Method: Compositional matrix adjust. Identities = 291/293 (99%), Positives = 291/293 (99%), Gaps = 1/293 (0%) Query 25 GSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKG 84 GSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKG Sbjct 17 GSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKG 76 Query 85 VTVAP-ALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLE 143 VTVAP ALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLE Sbjct 77 VTVAPPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLE 136 Query 144 QSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSG 203 QSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPA ATSGQTSLDLDTAAIDEALGRSG Sbjct 137 QSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPAPATSGQTSLDLDTAAIDEALGRSG 196 Query 204 TIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDV 263 TIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDV Sbjct 197 TIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDV 256 Query 264 VQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAAR 316 VQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAAR Sbjct 257 VQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAAR 309 >gi|15842556|ref|NP_337593.1| hypothetical protein MT3078 [Mycobacterium tuberculosis CDC1551] gi|13882868|gb|AAK47407.1| hypothetical protein MT3078 [Mycobacterium tuberculosis CDC1551] gi|323718379|gb|EGB27553.1| lipoprotein lppY [Mycobacterium tuberculosis CDC1551A] Length=329 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 166/312 (54%), Positives = 218/312 (70%), Gaps = 2/312 (0%) Query 4 RRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKL 63 + R+ A+ AAA+ L AC+ G + S TT+DADWKPVAD LGR+GKL Sbjct 13 KHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKL 72 Query 64 NDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELAS 122 D + Y+I R+DL + + GV + P LSLG + AFAR + +T+LMGDLV+TE+EL Sbjct 73 GDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPK 132 Query 123 VTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASAT 182 VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G GDAA LA+ +++ALDAT PP Sbjct 133 VTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPP 192 Query 183 SGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPP-SMGLATALNFQP 241 + Q +D+D A +D+ALGR GT GG+ K+ I R+D + G ++P S+ L T +NFQP Sbjct 193 ARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQP 252 Query 242 TGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVA 301 G GRAAINGDF++ A EVQ+V++A+R G I IV +HNHG E+PRLFYMH+WA +DAV Sbjct 253 VGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVT 312 Query 302 LARTLRAAVDAT 313 LAR LR A+DAT Sbjct 313 LARALRPAMDAT 324 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 199 DIDVAGVDQALGRKGT-QDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 257 Query 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 258 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 317 Query 167 RSALDATD 174 R A+DAT+ Sbjct 318 RPAMDATN 325 >gi|15610136|ref|NP_217515.1| lipoprotein LppY [Mycobacterium tuberculosis H37Rv] gi|148662849|ref|YP_001284372.1| putative lipoprotein LppY [Mycobacterium tuberculosis H37Ra] gi|307085724|ref|ZP_07494837.1| lipoprotein lppY [Mycobacterium tuberculosis SUMu012] gi|2791596|emb|CAA16084.1| PROBABLE CONSERVED LIPOPROTEIN LPPY [Mycobacterium tuberculosis H37Rv] gi|148507001|gb|ABQ74810.1| putative lipoprotein LppY [Mycobacterium tuberculosis H37Ra] gi|308364757|gb|EFP53608.1| lipoprotein lppY [Mycobacterium tuberculosis SUMu012] Length=321 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 166/312 (54%), Positives = 218/312 (70%), Gaps = 2/312 (0%) Query 4 RRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKL 63 + R+ A+ AAA+ L AC+ G + S TT+DADWKPVAD LGR+GKL Sbjct 5 KHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKL 64 Query 64 NDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELAS 122 D + Y+I R+DL + + GV + P LSLG + AFAR + +T+LMGDLV+TE+EL Sbjct 65 GDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPK 124 Query 123 VTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASAT 182 VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G GDAA LA+ +++ALDAT PP Sbjct 125 VTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPP 184 Query 183 SGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPP-SMGLATALNFQP 241 + Q +D+D A +D+ALGR GT GG+ K+ I R+D + G ++P S+ L T +NFQP Sbjct 185 ARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQP 244 Query 242 TGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVA 301 G GRAAINGDF++ A EVQ+V++A+R G I IV +HNHG E+PRLFYMH+WA +DAV Sbjct 245 VGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVT 304 Query 302 LARTLRAAVDAT 313 LAR LR A+DAT Sbjct 305 LARALRPAMDAT 316 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 191 DIDVAGVDQALGRKGT-QDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 249 Query 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 250 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 309 Query 167 RSALDATD 174 R A+DAT+ Sbjct 310 RPAMDATN 317 >gi|31794176|ref|NP_856669.1| lipoprotein LppY [Mycobacterium bovis AF2122/97] gi|121638881|ref|YP_979105.1| putative lipoprotein lppY [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991373|ref|YP_002646062.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] 55 more sequence titles Length=321 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 166/312 (54%), Positives = 218/312 (70%), Gaps = 2/312 (0%) Query 4 RRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKL 63 + R+ A+ AAA+ L AC+ G + S TT+DADWKPVAD LGR+GKL Sbjct 5 KHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKL 64 Query 64 NDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELAS 122 D + Y+I R+DL + + GV + P LSLG + AFAR + +T+LMGDLV+TE+EL Sbjct 65 GDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPK 124 Query 123 VTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASAT 182 VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G GDAA LA+ +++ALDAT PP Sbjct 125 VTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPP 184 Query 183 SGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPP-SMGLATALNFQP 241 + Q +D+D A +D+ALGR GT GG+ K+ I R+D + G ++P S+ L T +NFQP Sbjct 185 ARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQP 244 Query 242 TGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVA 301 G GRAAINGDF++ A EVQ+V++A+R G I IV +HNHG E+PRLFYMH+WA +DAV Sbjct 245 VGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVT 304 Query 302 LARTLRAAVDAT 313 LAR LR A+DAT Sbjct 305 LARALRPAMDAT 316 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 191 DIDVAGVDQALGRKGT-QDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 249 Query 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 250 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 309 Query 167 RSALDATD 174 R A+DAT+ Sbjct 310 RPAMDATN 317 >gi|148824189|ref|YP_001288943.1| lipoprotein lppY [Mycobacterium tuberculosis F11] gi|253797906|ref|YP_003030907.1| lipoprotein lppY [Mycobacterium tuberculosis KZN 1435] gi|254233082|ref|ZP_04926409.1| lipoprotein lppY [Mycobacterium tuberculosis C] 10 more sequence titles Length=326 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 166/312 (54%), Positives = 218/312 (70%), Gaps = 2/312 (0%) Query 4 RRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKL 63 + R+ A+ AAA+ L AC+ G + S TT+DADWKPVAD LGR+GKL Sbjct 10 KHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKL 69 Query 64 NDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELAS 122 D + Y+I R+DL + + GV + P LSLG + AFAR + +T+LMGDLV+TE+EL Sbjct 70 GDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPK 129 Query 123 VTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASAT 182 VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G GDAA LA+ +++ALDAT PP Sbjct 130 VTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPP 189 Query 183 SGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPP-SMGLATALNFQP 241 + Q +D+D A +D+ALGR GT GG+ K+ I R+D + G ++P S+ L T +NFQP Sbjct 190 ARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQP 249 Query 242 TGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVA 301 G GRAAINGDF++ A EVQ+V++A+R G I IV +HNHG E+PRLFYMH+WA +DAV Sbjct 250 VGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVT 309 Query 302 LARTLRAAVDAT 313 LAR LR A+DAT Sbjct 310 LARALRPAMDAT 321 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 196 DIDVAGVDQALGRKGT-QDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 254 Query 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 255 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 314 Query 167 RSALDATD 174 R A+DAT+ Sbjct 315 RPAMDATN 322 >gi|167967833|ref|ZP_02550110.1| hypothetical protein MtubH3_07292 [Mycobacterium tuberculosis H37Ra] Length=326 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 166/312 (54%), Positives = 218/312 (70%), Gaps = 2/312 (0%) Query 4 RRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKL 63 + R+ A+ AAA+ L AC+ G + S TT+DADWKPVAD LGR+GKL Sbjct 10 KHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKL 69 Query 64 NDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELAS 122 D + Y+I R+DL + + GV + P LSLG + AFAR + +T+LMGDLV+TE+EL Sbjct 70 GDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPK 129 Query 123 VTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASAT 182 VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G GDAA LA+ +++ALDAT PP Sbjct 130 VTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPP 189 Query 183 SGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPP-SMGLATALNFQP 241 + Q +D+D A +D+ALGR GT GG+ K+ I R+D + G ++P S+ L T +NFQP Sbjct 190 ARQPPVDIDVAGVDQALGRKGTQDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQP 249 Query 242 TGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVA 301 G GRAAINGDF++ A EVQ+V++A+R G I IV +HNHG E+PRLFYMH+WA +DAV Sbjct 250 VGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVT 309 Query 302 LARTLRAAVDAT 313 LAR LR A+DAT Sbjct 310 LARALRPAMDAT 321 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 196 DIDVAGVDQALGRKGT-QDGGLMKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 254 Query 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 255 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 314 Query 167 RSALDATD 174 R A+DAT+ Sbjct 315 RPAMDATN 322 >gi|340627989|ref|YP_004746441.1| putative lipoprotein LPPY [Mycobacterium canettii CIPT 140010059] gi|340006179|emb|CCC45353.1| putative conserved lipoprotein LPPY [Mycobacterium canettii CIPT 140010059] Length=321 Score = 328 bits (841), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 165/312 (53%), Positives = 217/312 (70%), Gaps = 2/312 (0%) Query 4 RRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKL 63 + R+ A+ AAA+ L AC+ G + S TT+D DWKPVAD LGR+GKL Sbjct 5 KHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDTDWKPVADALGRSGKL 64 Query 64 NDGSV-YKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELAS 122 D + Y+I R+DL + + GV + P LSLG + AFAR + +T+LMGDLV+TE+EL Sbjct 65 GDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPK 124 Query 123 VTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASAT 182 VTDA+QA G+ QTALHKHLL+Q PP+WWTHI G GDAA LA+ +++ALDAT PP Sbjct 125 VTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDATTIGPPTPPP 184 Query 183 SGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPP-SMGLATALNFQP 241 + Q +D+D A +D+ALGR GT GG+ K+ I R+D + G ++P S+ L T +NFQP Sbjct 185 ARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQP 244 Query 242 TGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVA 301 G GRAAINGDF++ A EVQ+V++A+R G I IV +HNHG E+PRLFYMH+WA +DAV Sbjct 245 VGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVT 304 Query 302 LARTLRAAVDAT 313 LAR LR A+DAT Sbjct 305 LARALRPAMDAT 316 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 D D V LGR G DG + K R D ++ V A +L+L + + F G+ Sbjct 191 DIDVAGVDQALGRKGT-QDGGLLKYSIPRKDTIIEDGHVLPAVSLNLTTVINFQPVGRGR 249 Query 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 + GD ++ E+ V A++AG + LH H L + P +++ H DA LARA+ Sbjct 250 AAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARAL 309 Query 167 RSALDATD 174 R A+DAT+ Sbjct 310 RPAMDATN 317 >gi|170783572|ref|YP_001740089.1| lipoprotein [Arthrobacter sp. Chr15] gi|150035080|gb|ABR67076.1| hypothetical lipoprotein [Arthrobacter sp. Chr15] Length=327 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 171/308 (56%), Positives = 215/308 (70%), Gaps = 14/308 (4%) Query 19 ALTAC-----AGSDDKGEPDDGG------DRGASLA-TTSDADWKPVADILGRTGKLNDG 66 ALTAC AG G +GG ++G TSDADWKPV + LGRTGK D Sbjct 15 ALTACTAPTPAGPSPSGAMSEGGAMQPATEQGQREPDATSDADWKPVTEALGRTGKFGDN 74 Query 67 -SVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTD 125 +VY+I R+DL V ++GV + P LSLG + AFA+ DG MLMGDLVVTE EL VTD Sbjct 75 NTVYRIPLPRTDLHVTSQGVDIKPGLSLGGYAAFAKYDDG-VMLMGDLVVTEAELPKVTD 133 Query 126 AVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQ 185 A+QA G++QTA+HKHLLEQSP +WWTHI GD +A +++ALDAT P A+ + Q Sbjct 134 ALQAHGIEQTAVHKHLLEQSPAVWWTHIHAMGDPVKIAEGIKAALDATAIPAAAAPAATQ 193 Query 186 TSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNG 245 +DLDTAAID ALGR GT GG+YK+ +AR++ +T ++PP+ G+ TA+NFQP G G Sbjct 194 PPVDLDTAAIDAALGRKGTADGGIYKYSLARKETITDGNDILPPTFGITTAVNFQPLGGG 253 Query 246 RAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALART 305 +AAINGDF +T +EVQ V+QALR GGIDIV +H+H EQPRLFY+HFWA NDA ALA+ Sbjct 254 KAAINGDFALTESEVQPVMQALRKGGIDIVELHSHSLTEQPRLFYLHFWAVNDATALAKA 313 Query 306 LRAAVDAT 313 LR A+DA Sbjct 314 LRPALDAN 321 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/118 (34%), Positives = 60/118 (51%), Gaps = 2/118 (1%) Query 57 LGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVT 116 LGR G DG +YK AR + ++ + P + + V F G+ + GD +T Sbjct 207 LGRKGT-ADGGIYKYSLARKE-TITDGNDILPPTFGITTAVNFQPLGGGKAAINGDFALT 264 Query 117 EDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATD 174 E E+ V A++ GG+ LH H L + P +++ H DA LA+A+R ALDA D Sbjct 265 ESEVQPVMQALRKGGIDIVELHSHSLTEQPRLFYLHFWAVNDATALAKALRPALDAND 322 >gi|116662416|ref|YP_829469.1| protein of unknown function LppY and LpqO [Arthrobacter sp. FB24] gi|116613195|gb|ABK05888.1| protein of unknown function LppY and LpqO [Arthrobacter sp. FB24] Length=337 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 160/272 (59%), Positives = 196/272 (73%), Gaps = 3/272 (1%) Query 43 ATTSDADWKPVADILGRTGKLNDG-SVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFAR 101 A+T++ADW PV D LGRTGK DG +VY+I R+DL V T GV V LSLG + AFA+ Sbjct 62 ASTAEADWNPVTDALGRTGKFGDGNTVYRIPLPRTDLHVVTGGVAVKSGLSLGGYAAFAK 121 Query 102 TPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAAD 161 DG TMLMGDLVVTE EL VTDA+QA G+ QTALHKHL EQSP +WWTHI GD Sbjct 122 YDDG-TMLMGDLVVTEAELPKVTDALQAHGIGQTALHKHLPEQSPSVWWTHIHAMGDPVK 180 Query 162 LARAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVT 221 LA +++ALDAT P A+A QT+ DLD+A ID ALGR G GG+YKF + R + +T Sbjct 181 LAEGLKAALDATAIAP-AAAAGDQTAPDLDSAGIDAALGRKGAADGGIYKFSLPRAETIT 239 Query 222 MSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHG 281 G ++PP+ G+ TA+NFQP G G+AAINGDF M EVQ V+QALR GGI +V++HNH Sbjct 240 DEGHVLPPTFGVTTAINFQPVGGGKAAINGDFAMIGPEVQKVIQALRKGGITVVSVHNHS 299 Query 282 FDEQPRLFYMHFWAENDAVALARTLRAAVDAT 313 ++PRLFY HFWA DAV LA+ LRAA+D+T Sbjct 300 LTDEPRLFYAHFWAVEDAVTLAKALRAALDST 331 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/131 (30%), Positives = 66/131 (51%), Gaps = 2/131 (1%) Query 44 TTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTP 103 T D D + LGR G DG +YK R++ ++ +G + P + + + F Sbjct 204 TAPDLDSAGIDAALGRKGAA-DGGIYKFSLPRAE-TITDEGHVLPPTFGVTTAINFQPVG 261 Query 104 DGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLA 163 G+ + GD + E+ V A++ GG+ ++H H L P +++ H DA LA Sbjct 262 GGKAAINGDFAMIGPEVQKVIQALRKGGITVVSVHNHSLTDEPRLFYAHFWAVEDAVTLA 321 Query 164 RAVRSALDATD 174 +A+R+ALD+T+ Sbjct 322 KALRAALDSTN 332 >gi|289752644|ref|ZP_06512022.1| LOW QUALITY PROTEIN: lipoprotein lpqo [Mycobacterium tuberculosis EAS054] gi|289693231|gb|EFD60660.1| LOW QUALITY PROTEIN: lipoprotein lpqo [Mycobacterium tuberculosis EAS054] Length=316 Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 155/172 (91%), Positives = 156/172 (91%), Gaps = 13/172 (7%) Query 145 SPPIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGT 204 +PP W RAVRSALDATDTPPPA ATSGQTSLDLDTAAIDEALGRSGT Sbjct 158 TPPTW-------------PRAVRSALDATDTPPPAPATSGQTSLDLDTAAIDEALGRSGT 204 Query 205 IAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVV 264 IAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVV Sbjct 205 IAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVV 264 Query 265 QALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAAR 316 QALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAAR Sbjct 265 QALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAAR 316 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 45/130 (35%), Positives = 73/130 (57%), Gaps = 2/130 (1%) Query 44 TTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTP 103 T+ D D + + LGR+G + G VYK AR D V G+ + P++ L + + F T Sbjct 186 TSLDLDTAAIDEALGRSGTIA-GGVYKFFIARRD-PVTMSGMLIPPSMGLATALNFQPTG 243 Query 104 DGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLA 163 +G+ + GD V+T E+ V A++ GG+ A+H H ++ P +++ H DA LA Sbjct 244 NGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALA 303 Query 164 RAVRSALDAT 173 R +R+A+DAT Sbjct 304 RTLRAAVDAT 313 >gi|94970469|ref|YP_592517.1| protein of unknown function LppY and LpqO [Candidatus Koribacter versatilis Ellin345] gi|94552519|gb|ABF42443.1| protein of unknown function LppY and LpqO [Candidatus Koribacter versatilis Ellin345] Length=295 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 140/279 (51%), Positives = 192/279 (69%), Gaps = 5/279 (1%) Query 41 SLATTSDAD-WKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAF 99 SL S AD WKPVAD LGR+GK G VYK+G R D+ V GV + PAL+LGSW+AF Sbjct 13 SLFGFSQADPWKPVADALGRSGKEQPGGVYKVGLPRGDMHVTVNGVALKPALALGSWLAF 72 Query 100 ARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDA 159 ++ + M+MGDLV++EDE+ V +Q G++QTALH H+L +SP + + HI+GHGD Sbjct 73 -KSMGSEMMVMGDLVLSEDEVEPVMLKLQQSGIEQTALHNHVLHESPRVMYMHISGHGDG 131 Query 160 ADLARAVRSALDATDTPPPASATSGQTS---LDLDTAAIDEALGRSGTIAGGVYKFFIAR 216 A LA A+ A+ T TP P + + L++D+ A+ ALGR G + GV +F + R Sbjct 132 AKLAAALHDAIALTKTPTPPTGATPAAKPDGLEIDSEAVSSALGRKGNVNSGVLQFSVPR 191 Query 217 RDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVA 276 + + IPPSMG ATA+NFQPTG G+AAI GDFV+ A+EV V++ALRGGGI++ A Sbjct 192 AEKIMDGSTEIPPSMGTATAINFQPTGGGKAAITGDFVLIASEVNPVIRALRGGGIEVTA 251 Query 277 IHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAA 315 +H+H E+PRLF+MHFWA +DA+ LA+TL++A+D T A Sbjct 252 VHSHMLTEEPRLFFMHFWANDDALKLAKTLKSAIDNTNA 290 >gi|92117415|ref|YP_577144.1| protein of unknown function LppY and LpqO [Nitrobacter hamburgensis X14] gi|91800309|gb|ABE62684.1| protein of unknown function LppY and LpqO [Nitrobacter hamburgensis X14] Length=296 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 145/279 (52%), Positives = 189/279 (68%), Gaps = 7/279 (2%) Query 40 ASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAF 99 A+LA + DW+ V LGR ++ G V++ GF+RSDL V GVT+APAL+LG WVA Sbjct 17 ATLANAQEIDWQKVDSTLGRKPAIS-GDVHRYGFSRSDLKVTLDGVTIAPALALGGWVAL 75 Query 100 ARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDA 159 + G M MGDLV+ E E+ V + GGL+ TA+H HLL +P ++ H+ GHGDA Sbjct 76 -KPMHGGVMAMGDLVLLESEINPVMSKLIEGGLEVTAVHNHLLRATPATFYLHVGGHGDA 134 Query 160 ADLARAVRSALDATDTP--PPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARR 217 LA A+ AL A+ TP PA ATS ++DLDTA ID+ +G G GGVY+ +ARR Sbjct 135 VKLASAIHDALAASKTPLTTPA-ATSSNGAIDLDTARIDQIIGAKGHANGGVYQIGVARR 193 Query 218 DPVTMSGMLIPPS--MGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIV 275 D VTM GM I P+ MG+AT +NFQPTG G+AAI GDFV+ +EV VV ALR GID+ Sbjct 194 DDVTMDGMAISPAGPMGVATGINFQPTGAGKAAITGDFVLIDSEVNPVVNALRANGIDVT 253 Query 276 AIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATA 314 A+H+H DEQPRLF++HFWA +DA+ LA+ LR+A+D TA Sbjct 254 AVHSHMLDEQPRLFFLHFWANDDAIKLAQGLRSALDKTA 292 >gi|337767795|emb|CCB76506.1| conserved exported protein of unknown function [Streptomyces cattleya NRRL 8057] Length=354 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 154/333 (47%), Positives = 195/333 (59%), Gaps = 27/333 (8%) Query 4 RRGARMAA--LLAAAALALTACAG-------SDDKGEPDDGGDRGASL-----------A 43 R G R+ A L A+ LTACA S G P RGA Sbjct 8 RNGHRLRASVALTTCAVTLTACAAQGAGTGTSAGDGHPGPPAPRGAHRHRAHCPHVQYPE 67 Query 44 TTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTP 103 T DADWK VA+ LGRTG + + + R DL V + GVTV +L+L AF R Sbjct 68 RTKDADWKGVAEALGRTGTTREDVAFGVSLPRRDLKVTSHGVTVLSSLALAGSAAFVRYC 127 Query 104 DGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLA 163 DG TMLMGDLV+T DE+ +DA+QA G+ QTALHKHL ++ P IWWTH GD LA Sbjct 128 DG-TMLMGDLVLTGDEVDKASDALQAAGIDQTALHKHLPDEQPAIWWTHFHAMGDPVTLA 186 Query 164 RAVRSALDATDTP---PPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPV 220 R +++ L+ + P PP + T +DLDT ID LGR G G +YKFF++RRD + Sbjct 187 RKLKTVLEVSGNPIAVPPPAETR---PIDLDTTTIDRELGRKGVAEGRIYKFFLSRRDRI 243 Query 221 TMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNH 280 G ++P +G+ TA+ FQ G +AAINGDFV+ A EVQ VV+ALR GI +V +HNH Sbjct 244 LSHGHVLPGPIGVNTAIKFQAIGKKQAAINGDFVLRADEVQPVVRALRKHGIRLVELHNH 303 Query 281 GFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 313 DEQPR+F++HFWA D LAR LR A+DAT Sbjct 304 MLDEQPRMFFLHFWAVGDGNELARALRPALDAT 336 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/128 (33%), Positives = 68/128 (54%), Gaps = 2/128 (1%) Query 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 D D + LGR G + +G +YK +R D + + G + + + + + F Q Sbjct 212 DLDTTTIDRELGRKG-VAEGRIYKFFLSRRD-RILSHGHVLPGPIGVNTAIKFQAIGKKQ 269 Query 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 + GD V+ DE+ V A++ G++ LH H+L++ P +++ H GD +LARA+ Sbjct 270 AAINGDFVLRADEVQPVVRALRKHGIRLVELHNHMLDEQPRMFFLHFWAVGDGNELARAL 329 Query 167 RSALDATD 174 R ALDATD Sbjct 330 RPALDATD 337 >gi|85715795|ref|ZP_01046774.1| hypothetical protein NB311A_13461 [Nitrobacter sp. Nb-311A] gi|85697448|gb|EAQ35327.1| hypothetical protein NB311A_13461 [Nitrobacter sp. Nb-311A] Length=300 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 138/281 (50%), Positives = 188/281 (67%), Gaps = 5/281 (1%) Query 38 RGASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWV 97 G++ A DW V ILGR + + V++ GF+R+DL+V GVT+ PAL+LG W+ Sbjct 19 HGSAYAQDHGVDWGKVDGILGRKPAVTE-DVHRYGFSRTDLTVTLDGVTIKPALALGGWI 77 Query 98 AFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHG 157 AF + DG M MGDLV+ E E+ V + AGGL+ TA+H HLL +P ++ H+AGHG Sbjct 78 AFKQAHDG-AMAMGDLVLLESEINPVMLKMIAGGLEITAIHNHLLRATPATFYMHVAGHG 136 Query 158 DAADLARAVRSALDATDTPPPASATSGQT-SLDLDTAAIDEALGRSGTIAGGVYKFFIAR 216 D A LA + AL + TP A+ +S ++DLDTA +D+ +G G GGVY+F + R Sbjct 137 DPAKLATVLHDALAESKTPLQATPSSNPPPAVDLDTAQLDQIIGVKGKTNGGVYQFNVPR 196 Query 217 RDPVTMSGMLIPPS--MGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDI 274 RDPV+ GM + P+ MG+A +NFQPTG G+AAI GDFV+T EV VV ALR GI++ Sbjct 197 RDPVSEGGMTLTPAGPMGVAIGINFQPTGGGKAAITGDFVLTGDEVNPVVAALRTHGIEV 256 Query 275 VAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAA 315 A+H+H DEQPRLF+MHFWA +DA+ LA+ LRAA+D TA+ Sbjct 257 TALHSHMLDEQPRLFFMHFWANDDAIKLAKGLRAALDKTAS 297 >gi|27383178|ref|NP_774707.1| hypothetical protein bll8067 [Bradyrhizobium japonicum USDA 110] gi|27356352|dbj|BAC53332.1| bll8067 [Bradyrhizobium japonicum USDA 110] Length=385 Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 138/277 (50%), Positives = 183/277 (67%), Gaps = 5/277 (1%) Query 42 LATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFAR 101 +A DW+ V + LGR ++D V++ GF RSDLSV GVT+ P+L+LG WVAF + Sbjct 108 MARAQAIDWQKVDETLGRKAAVSD-DVHRYGFPRSDLSVSLDGVTIKPSLALGGWVAF-K 165 Query 102 TPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAAD 161 G M+MGDLV+ E E+ V + A GL+ TA+H HLL SP ++ H+AGHGD Sbjct 166 PGHGGAMVMGDLVLLETEINPVMAKMIANGLEITAVHNHLLRASPATFYMHVAGHGDPVK 225 Query 162 LARAVRSALDATDTPPPASA-TSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPV 220 L+ A+ AL + TP A S ++DLDTA +D+ +G G GGVY+F + RRDP+ Sbjct 226 LSSAIHDALAESKTPLTVGAPASPPPAVDLDTAKLDQIIGVKGQANGGVYQFNVKRRDPI 285 Query 221 TMSGMLIPP--SMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIH 278 T GM + P MG+A +NFQPTG GRAAI GDFV+T EV V+ ALR GI++ A+H Sbjct 286 TQEGMPLTPVGPMGVAIGINFQPTGGGRAAITGDFVLTGDEVNPVILALRAHGIEVTALH 345 Query 279 NHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAA 315 +H DEQPRLF+MHFWA +DAV LA+ LRAA+D TA+ Sbjct 346 SHMLDEQPRLFFMHFWASDDAVKLAKGLRAALDKTAS 382 >gi|85717674|ref|ZP_01048611.1| LpqO protein-like [Nitrobacter sp. Nb-311A] gi|85695497|gb|EAQ33418.1| LpqO protein-like [Nitrobacter sp. Nb-311A] Length=285 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 138/281 (50%), Positives = 187/281 (67%), Gaps = 5/281 (1%) Query 38 RGASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWV 97 G++ A DW V ILGR + + V++ GF R+DL+V GVT+ PAL+LG W+ Sbjct 4 NGSTYAQDHGVDWGKVDGILGRNPAVTE-DVHRYGFPRTDLTVTLDGVTIKPALALGGWI 62 Query 98 AFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHG 157 AF + +G M MGDLV+ E E+ V + AGGL+ TA+H HLL SP ++ H+AGHG Sbjct 63 AFKQAHEG-AMAMGDLVLLESEINPVMLKMIAGGLEITAIHNHLLRASPATFYMHVAGHG 121 Query 158 DAADLARAVRSALDATDTPPPASATSGQT-SLDLDTAAIDEALGRSGTIAGGVYKFFIAR 216 D A LA A+ AL + TP A+ +S ++DLDTA +D+ +G G GGVY+F + R Sbjct 122 DPAKLATALHDALAESKTPLQATPSSNPPPAVDLDTAQLDQIIGVKGKTNGGVYQFNVPR 181 Query 217 RDPVTMSGMLIPPS--MGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDI 274 RDPV+ GM + P+ MG+A +NFQPTG G+AA GDFV+T EV VV ALR GI++ Sbjct 182 RDPVSEGGMTLTPAGPMGVAIGINFQPTGGGKAATTGDFVLTGDEVNPVVAALRTHGIEV 241 Query 275 VAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAA 315 A+H+H DEQPRLF+MHFWA +DA+ LA+ LRAA+D TA+ Sbjct 242 TALHSHMLDEQPRLFFMHFWANDDAIKLAKGLRAALDKTAS 282 >gi|337768783|emb|CCB77496.1| conserved exported protein of unknown function [Streptomyces cattleya NRRL 8057] Length=353 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 138/272 (51%), Positives = 171/272 (63%), Gaps = 6/272 (2%) Query 45 TSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPD 104 T++ADW PVA LGR G L D + + R DL+V T GVTV L+L AF R D Sbjct 71 TTEADWAPVAQALGRHGVLRDKVTFGVLLPRGDLNVTTHGVTVVAPLALAGSAAFVRYCD 130 Query 105 GQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLAR 164 G TMLMGDLV+T DE+ DA+ A G++ TALHKHL E++PP WW H GD LAR Sbjct 131 G-TMLMGDLVLTADEVDRTVDALHAAGIEMTALHKHLAEENPPTWWVHFHAMGDPVALAR 189 Query 165 AVRSALDATDTPPPASATSGQ---TSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVT 221 ++ L T TP A+ Q L+LDTAAID LGR GT+AG VY F+ RR PV Sbjct 190 GLKQVLAVTATP--AAVPHRQDPARPLELDTAAIDRELGRKGTVAGSVYVVFVDRRRPVV 247 Query 222 MSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHG 281 M G ++P S G TAL FQ G +AA+NGD ++TA EVQ ALR GI +V +HNH Sbjct 248 MHGHVLPGSTGCNTALMFQSLGKDQAAVNGDLILTADEVQPAAHALRAHGIRLVELHNHM 307 Query 282 FDEQPRLFYMHFWAENDAVALARTLRAAVDAT 313 DE+P +F++HFWA +A LAR LRAA+D T Sbjct 308 LDERPHVFFLHFWATGNATDLARALRAALDTT 339 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/125 (35%), Positives = 66/125 (53%), Gaps = 2/125 (1%) Query 57 LGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVT 116 LGR G + GSVY + F V G + + + + F Q + GDL++T Sbjct 225 LGRKGTVA-GSVYVV-FVDRRRPVVMHGHVLPGSTGCNTALMFQSLGKDQAAVNGDLILT 282 Query 117 EDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTP 176 DE+ A++A G++ LH H+L++ P +++ H G+A DLARA+R+ALD T Sbjct 283 ADEVQPAAHALRAHGIRLVELHNHMLDERPHVFFLHFWATGNATDLARALRAALDTTRLA 342 Query 177 PPASA 181 PP A Sbjct 343 PPTGA 347 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/132 (35%), Positives = 70/132 (54%), Gaps = 3/132 (2%) Query 185 QTSLDLDTAAIDEALGRSGTIAGGV-YKFFIARRD-PVTMSGMLIPPSMGLATALNFQPT 242 + + + D A + +ALGR G + V + + R D VT G+ + + LA + F Sbjct 69 EETTEADWAPVAQALGRHGVLRDKVTFGVLLPRGDLNVTTHGVTVVAPLALAGSAAFVRY 128 Query 243 GNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVAL 302 +G + GD V+TA EV V AL GI++ A+H H +E P +++HF A D VAL Sbjct 129 CDG-TMLMGDLVLTADEVDRTVDALHAAGIEMTALHKHLAEENPPTWWVHFHAMGDPVAL 187 Query 303 ARTLRAAVDATA 314 AR L+ + TA Sbjct 188 ARGLKQVLAVTA 199 >gi|254387982|ref|ZP_05003219.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294817529|ref|ZP_06776171.1| Lipoprotein lpqO [Streptomyces clavuligerus ATCC 27064] gi|197701706|gb|EDY47518.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294322344|gb|EFG04479.1| Lipoprotein lpqO [Streptomyces clavuligerus ATCC 27064] Length=349 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 144/270 (54%), Positives = 174/270 (65%), Gaps = 3/270 (1%) Query 45 TSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPD 104 ++ ADW VA +LGR G L G Y F RSDL V + GV V P L+LGS VAFAR D Sbjct 68 SAKADWAAVARVLGRDGSLLRGVTYHTAFNRSDLRVFSHGVRVTPGLALGSHVAFARYAD 127 Query 105 GQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHG-DAADLA 163 G TM MGD+VVTEDEL +VTDA Q G+ QTA+HKHLL P IWWTHI HG D +A Sbjct 128 GSTMAMGDIVVTEDELQAVTDAFQRHGIAQTAIHKHLLAHHPDIWWTHIHAHGKDPVAIA 187 Query 164 RAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMS 223 R VR+ LD T T P A +DLDT ID ALG G+ G+YK R + V S Sbjct 188 RGVRAGLDRTAT--PPPAPPPTGPIDLDTDGIDTALGIKGSGVDGIYKAAFIRAEKVVDS 245 Query 224 GMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFD 283 +++PP +G TA FQP G GRAA++GD +TA EV DV+ ALR GGI +V +HNH Sbjct 246 HLVLPPGLGATTAFVFQPVGGGRAALHGDCAVTADEVDDVIGALRRGGISLVELHNHHLR 305 Query 284 EQPRLFYMHFWAENDAVALARTLRAAVDAT 313 + PRLF++HFWA +DAV +AR LR VD T Sbjct 306 DTPRLFFIHFWAVDDAVRIARALRRTVDVT 335 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/139 (33%), Positives = 66/139 (48%), Gaps = 3/139 (2%) Query 47 DADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 D D + LG G DG +YK F R++ V + + + P L + F G+ Sbjct 211 DLDTDGIDTALGIKGSGVDG-IYKAAFIRAEKVVDSH-LVLPPGLGATTAFVFQPVGGGR 268 Query 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 L GD VT DE+ V A++ GG+ LH H L +P +++ H DA +ARA+ Sbjct 269 AALHGDCAVTADEVDDVIGALRRGGISLVELHNHHLRDTPRLFFIHFWAVDDAVRIARAL 328 Query 167 RSALDATDT-PPPASATSG 184 R +D T+ PP S G Sbjct 329 RRTVDVTNVIAPPESPPRG 347 >gi|345138082|dbj|BAK67691.1| hypothetical protein SLG_30160 [Sphingobium sp. SYK-6] Length=297 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 136/265 (52%), Positives = 175/265 (67%), Gaps = 3/265 (1%) Query 53 VADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGD 112 V+ ++G+TG G VY+IG RSDL V GVT+ PAL+L SW+AF Q M+MGD Sbjct 29 VSTVIGKTGTEMPGGVYRIGLPRSDLKVTLDGVTLKPALALSSWLAFVGHGQNQVMVMGD 88 Query 113 LVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDA 172 LV+T+ E+ V + AGG++ TALH HLL +P + HIAGHGD A LAR V AL Sbjct 89 LVLTDTEVNPVMAKLIAGGIEITALHNHLLRNTPHTMYMHIAGHGDPARLARTVHDALAL 148 Query 173 TDTP---PPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPP 229 + TP PA+ + +LDLDTAA+D L G + GGVY F I R + GM +PP Sbjct 149 SGTPLSVAPATNPAAPETLDLDTAALDRLLRHKGKVGGGVYAFGIPRAETPRDGGMALPP 208 Query 230 SMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLF 289 +MG A A+NFQPTG G+AAI GDFV+TAAEV V++ LR GI++ A+HNH D++PRLF Sbjct 209 AMGAAIAINFQPTGGGKAAITGDFVLTAAEVNPVLKTLRENGIEVTALHNHMLDDEPRLF 268 Query 290 YMHFWAENDAVALARTLRAAVDATA 314 +MHFWA +DA LAR L AA+ A Sbjct 269 FMHFWANDDAQKLARGLAAALGHVA 293 >gi|326446146|ref|ZP_08220880.1| hypothetical protein SclaA2_34007 [Streptomyces clavuligerus ATCC 27064] Length=311 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 144/270 (54%), Positives = 174/270 (65%), Gaps = 3/270 (1%) Query 45 TSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPD 104 ++ ADW VA +LGR G L G Y F RSDL V + GV V P L+LGS VAFAR D Sbjct 30 SAKADWAAVARVLGRDGSLLRGVTYHTAFNRSDLRVFSHGVRVTPGLALGSHVAFARYAD 89 Query 105 GQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHG-DAADLA 163 G TM MGD+VVTEDEL +VTDA Q G+ QTA+HKHLL P IWWTHI HG D +A Sbjct 90 GSTMAMGDIVVTEDELQAVTDAFQRHGIAQTAIHKHLLAHHPDIWWTHIHAHGKDPVAIA 149 Query 164 RAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMS 223 R VR+ LD T T P A +DLDT ID ALG G+ G+YK R + V S Sbjct 150 RGVRAGLDRTAT--PPPAPPPTGPIDLDTDGIDTALGIKGSGVDGIYKAAFIRAEKVVDS 207 Query 224 GMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFD 283 +++PP +G TA FQP G GRAA++GD +TA EV DV+ ALR GGI +V +HNH Sbjct 208 HLVLPPGLGATTAFVFQPVGGGRAALHGDCAVTADEVDDVIGALRRGGISLVELHNHHLR 267 Query 284 EQPRLFYMHFWAENDAVALARTLRAAVDAT 313 + PRLF++HFWA +DAV +AR LR VD T Sbjct 268 DTPRLFFIHFWAVDDAVRIARALRRTVDVT 297 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/129 (34%), Positives = 63/129 (49%), Gaps = 3/129 (2%) Query 57 LGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVT 116 LG G DG +YK F R++ V + + + P L + F G+ L GD VT Sbjct 183 LGIKGSGVDG-IYKAAFIRAEKVVDSH-LVLPPGLGATTAFVFQPVGGGRAALHGDCAVT 240 Query 117 EDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDT- 175 DE+ V A++ GG+ LH H L +P +++ H DA +ARA+R +D T+ Sbjct 241 ADEVDDVIGALRRGGISLVELHNHHLRDTPRLFFIHFWAVDDAVRIARALRRTVDVTNVI 300 Query 176 PPPASATSG 184 PP S G Sbjct 301 APPESPPRG 309 >gi|182679065|ref|YP_001833211.1| hypothetical protein Bind_2102 [Beijerinckia indica subsp. indica ATCC 9039] gi|182634948|gb|ACB95722.1| protein of unknown function LppY and LpqO [Beijerinckia indica subsp. indica ATCC 9039] Length=294 Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 134/263 (51%), Positives = 173/263 (66%), Gaps = 2/263 (0%) Query 49 DWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTM 108 DW VA LG++G VY++G RSDL + GVT+ PAL+LGSW+AF D + M Sbjct 25 DWGAVARALGKSGTELPEGVYRVGLPRSDLEITVDGVTIKPALALGSWLAFRENGD-EAM 83 Query 109 LMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRS 168 +MGDLV+T+DE V ++ ++ TALH HLL P + HIAGHGDA LA A+ Sbjct 84 VMGDLVLTQDEANPVMKSLAESRIEITALHNHLLRAEPMPLYMHIAGHGDAVRLAEALHK 143 Query 169 ALDATDTPPPASATSGQ-TSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLI 227 AL + TP A+ Q +L+LDT A+D+ LG G GGVY+F IAR + +T GM I Sbjct 144 ALAMSKTPLEAAPPGAQPQALELDTTALDKLLGAQGKANGGVYQFTIARAEMITDGGMNI 203 Query 228 PPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPR 287 P SMG A+NFQP GNGRAAI GDFV+ A+EV V+ LR GI++ AIHNH D+QPR Sbjct 204 PASMGSGIAINFQPMGNGRAAITGDFVLIASEVNPVLLVLRENGIEVTAIHNHMLDDQPR 263 Query 288 LFYMHFWAENDAVALARTLRAAV 310 LF+MHFWA +DA+ LAR L+ A+ Sbjct 264 LFFMHFWAADDAIKLARGLKEAL 286 >gi|182679473|ref|YP_001833619.1| hypothetical protein Bind_2528 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635356|gb|ACB96130.1| protein of unknown function LppY and LpqO [Beijerinckia indica subsp. indica ATCC 9039] Length=294 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 131/274 (48%), Positives = 181/274 (67%), Gaps = 4/274 (1%) Query 40 ASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAF 99 AS +D DW + LG+ G G +Y++ ARSDL V GV + PAL+LGSW+ F Sbjct 16 ASAPACADPDWNAIGQALGKAGAELPGGLYRVPLARSDLKVTLAGVEIKPALALGSWLTF 75 Query 100 ARTPDGQ-TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGD 158 P G+ M+MGDLV+T+DE+A V + GG++ TALH HLL P + HI GHGD Sbjct 76 --QPAGKDAMVMGDLVLTQDEVAPVMKRLGEGGIEITALHNHLLHSQPLTMYMHIEGHGD 133 Query 159 AADLARAVRSALDATDTPP-PASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARR 217 LA A+ +AL + TP PASA + ++DLDT+A+D+ LG +G GGVY+F I R Sbjct 134 PLKLAEALHAALVLSKTPLGPASAPAAPQTIDLDTSALDKLLGHAGKANGGVYQFTIPRA 193 Query 218 DPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAI 277 + +T GM +P +MG A+NFQPTG G+AAI GDFV+ +EV V++ L+ GI++ A+ Sbjct 194 EAITDGGMAVPVAMGTGIAINFQPTGKGKAAITGDFVLIGSEVNPVLRTLQENGIEVTAV 253 Query 278 HNHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 HNH D+QPRLF++HFWA +DA+ LA L+AA+D Sbjct 254 HNHMLDDQPRLFFLHFWANDDAIKLAGGLKAALD 287 >gi|111025515|ref|YP_707935.1| hypothetical protein RHA1_ro08733 [Rhodococcus jostii RHA1] gi|110824494|gb|ABG99777.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=227 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 135/227 (60%), Positives = 163/227 (72%), Gaps = 6/227 (2%) Query 87 VAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSP 146 + P LSLG +VAFA D T++MGDLVVTEDEL VTDA++A G+ QTA+H LEQ+P Sbjct 1 MKPGLSLGGYVAFAWY-DDDTLVMGDLVVTEDELPQVTDALEAHGIAQTAIHNRPLEQTP 59 Query 147 PIWWTHIAGHGDAADLARAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIA 206 P+WWT + GD ADLAR +R+ALD T PP + Q +DLDTA LGR GT Sbjct 60 PVWWTRVHAMGDPADLARGIRAALDVTAIAPPTPPPAQQPPVDLDTA-----LGRHGTAD 114 Query 207 GGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQA 266 GG+YK I RRD + +G L+PP+ G+ TALNFQP G GRAA+NGD VMTA EVQ+V++A Sbjct 115 GGIYKLTIGRRDTIEDNGHLLPPTFGVTTALNFQPVGGGRAAVNGDIVMTAPEVQNVIEA 174 Query 267 LRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 313 LR GGID+V +HNH DEQP LFY+HFWA DA ALA TLR AVD T Sbjct 175 LRAGGIDVVEVHNHSLDEQPGLFYLHFWAVGDAPALAATLRIAVDTT 221 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/118 (33%), Positives = 66/118 (56%), Gaps = 2/118 (1%) Query 57 LGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVT 116 LGR G DG +YK+ R D +++ G + P + + + F G+ + GD+V+T Sbjct 107 LGRHGTA-DGGIYKLTIGRRD-TIEDNGHLLPPTFGVTTALNFQPVGGGRAAVNGDIVMT 164 Query 117 EDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATD 174 E+ +V +A++AGG+ +H H L++ P +++ H GDA LA +R A+D T+ Sbjct 165 APEVQNVIEALRAGGIDVVEVHNHSLDEQPGLFYLHFWAVGDAPALAATLRIAVDTTN 222 >gi|218532625|ref|YP_002423441.1| hypothetical protein Mchl_4739 [Methylobacterium chloromethanicum CM4] gi|218524928|gb|ACK85513.1| protein of unknown function LppY and LpqO [Methylobacterium chloromethanicum CM4] Length=320 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 134/285 (48%), Positives = 178/285 (63%), Gaps = 26/285 (9%) Query 53 VADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDG-QTMLMG 111 +A LG+ G G VY++G R+DL+V GV + P+ +LGSW+AF + G + M+MG Sbjct 29 IATGLGKPGTTMPGGVYRVGLPRTDLNVTLDGVQLKPSFALGSWLAFVKHGGGDEVMVMG 88 Query 112 DLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALD 171 DLV+T+DE+ V + GGL+ TALH HLL +P + H+ GHGDA LA +R AL Sbjct 89 DLVLTDDEVNPVMKRLVEGGLEITALHNHLLRNTPHTMYMHVGGHGDAGKLATTLREALG 148 Query 172 ATDTP-------------------------PPASATSGQTSLDLDTAAIDEALGRSGTIA 206 A+ TP PA AT+ +LDLDTAAID ALGR G + Sbjct 149 ASKTPFGGATAGATPPKAGSAEPASAGEGPVPAKATAPDQALDLDTAAIDAALGRKGKVN 208 Query 207 GGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQA 266 GGVY + R + GM +P +MG A A+NFQPTG G+AAI GDFV+TA EV V++A Sbjct 209 GGVYAVSVPRAETPKDHGMEVPEAMGSAIAINFQPTGGGKAAITGDFVLTADEVNPVIKA 268 Query 267 LRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 LRG GI++ A+HNH D++PRLF+MHFWA +DA LA+ LR A+D Sbjct 269 LRGNGIEVTALHNHMLDDEPRLFFMHFWANDDAGKLAKGLRDALD 313 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/123 (41%), Positives = 67/123 (55%), Gaps = 3/123 (2%) Query 194 AIDEALGRSGT-IAGGVYKFFIARRD-PVTMSGMLIPPSMGLATALNFQPTGNG-RAAIN 250 AI LG+ GT + GGVY+ + R D VT+ G+ + PS L + L F G G + Sbjct 28 AIATGLGKPGTTMPGGVYRVGLPRTDLNVTLDGVQLKPSFALGSWLAFVKHGGGDEVMVM 87 Query 251 GDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAV 310 GD V+T EV V++ L GG++I A+HNH P YMH DA LA TLR A+ Sbjct 88 GDLVLTDDEVNPVMKRLVEGGLEITALHNHLLRNTPHTMYMHVGGHGDAGKLATTLREAL 147 Query 311 DAT 313 A+ Sbjct 148 GAS 150 >gi|27378194|ref|NP_769723.1| hypothetical protein blr3083 [Bradyrhizobium japonicum USDA 110] gi|27351341|dbj|BAC48348.1| blr3083 [Bradyrhizobium japonicum USDA 110] Length=317 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 132/276 (48%), Positives = 178/276 (65%), Gaps = 5/276 (1%) Query 43 ATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFART 102 A D DW+ V D LGR + G V++ GF R+DL+V GVT+ P+L+LG WVAF + Sbjct 41 AHAQDVDWQKVDDALGRKPAVA-GDVHRYGFPRTDLTVTLDGVTIKPSLALGGWVAF-KP 98 Query 103 PDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADL 162 G M MGDLV+ E E+ V + GL+ TA+H HLL P ++ H+AGHGD + Sbjct 99 AHGAVMAMGDLVLLESEINPVMQKMIESGLEITAVHNHLLGAVPATFYMHVAGHGDPLKI 158 Query 163 ARAVRSALDATDTP-PPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVT 221 A A+++AL + TP + ++DLDTA +D+ +G G GGVY+F + RRDP+T Sbjct 159 ATAIKTALAESKTPMSAPAPAVPPPAIDLDTAKLDQIIGVKGQANGGVYQFNVPRRDPIT 218 Query 222 MSGMLIPP--SMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHN 279 GM + P MG+AT +NFQPTG GRAAI GDFV+ EV V+ ALR GI + A+H+ Sbjct 219 EHGMQLSPVGPMGVATGVNFQPTGGGRAAITGDFVLIGDEVNPVIMALRSHGISVTALHS 278 Query 280 HGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAA 315 H DEQPRLF+MHFWA +DA+ LA +RAA+D TA+ Sbjct 279 HMLDEQPRLFFMHFWANDDAIKLANGVRAALDKTAS 314 >gi|188581147|ref|YP_001924592.1| hypothetical protein Mpop_1894 [Methylobacterium populi BJ001] gi|179344645|gb|ACB80057.1| protein of unknown function LppY and LpqO [Methylobacterium populi BJ001] Length=319 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 134/297 (46%), Positives = 184/297 (62%), Gaps = 25/297 (8%) Query 40 ASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAF 99 +S+AT ++ +A LG+ G G VY++G R+DL V GV + PAL+LGSW+AF Sbjct 16 SSVATAAEPWQDAIATGLGKPGTAMPGGVYRVGLPRTDLKVTLDGVQLKPALALGSWLAF 75 Query 100 ARTPDG-QTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGD 158 + DG + M+MGDLV+TEDE+ V + G++ TA+H HLL SP + H++G G+ Sbjct 76 VKHGDGNEVMVMGDLVLTEDEVNPVMKRLVENGVEITAIHNHLLRASPSTLYMHVSGQGE 135 Query 159 AADLARAVRSALDATDTP------------------------PPASATSGQTSLDLDTAA 194 LA +R AL A+ TP PA AT+ +LDLDTAA Sbjct 136 PGKLAETLRQALGASRTPFGGATAGGTPPSRKTEPASAGEGPVPAKATAPDQALDLDTAA 195 Query 195 IDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFV 254 ID A+GR G + GGVY + R + GM++P +MG A A+NFQPTG G+AAI GDFV Sbjct 196 IDAAIGRKGKVNGGVYAVSVPRSETPKDHGMVVPEAMGSAIAINFQPTGGGKAAITGDFV 255 Query 255 MTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 +TA EV V++ALR GI++ A+HNH D++PRLF+MHFWA +DA LA+ LR A+D Sbjct 256 LTAEEVNPVIKALRASGIEVTALHNHMLDDEPRLFFMHFWANDDAGKLAKGLRDALD 312 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/123 (39%), Positives = 68/123 (56%), Gaps = 3/123 (2%) Query 194 AIDEALGRSGT-IAGGVYKFFIARRD-PVTMSGMLIPPSMGLATALNFQPTGNGRAA-IN 250 AI LG+ GT + GGVY+ + R D VT+ G+ + P++ L + L F G+G + Sbjct 28 AIATGLGKPGTAMPGGVYRVGLPRTDLKVTLDGVQLKPALALGSWLAFVKHGDGNEVMVM 87 Query 251 GDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAV 310 GD V+T EV V++ L G++I AIHNH P YMH + + LA TLR A+ Sbjct 88 GDLVLTEDEVNPVMKRLVENGVEITAIHNHLLRASPSTLYMHVSGQGEPGKLAETLRQAL 147 Query 311 DAT 313 A+ Sbjct 148 GAS 150 >gi|337763068|emb|CCB71776.1| conserved exported protein of unknown function [Streptomyces cattleya NRRL 8057] Length=474 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 130/273 (48%), Positives = 173/273 (64%), Gaps = 7/273 (2%) Query 45 TSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPD 104 T++ADW V++ILGR G + D + R DL V T GVTV P L+L AF R D Sbjct 94 TTEADWTTVSEILGRKGAVRDHVTFGFLLPRDDLRVTTHGVTVVPPLALAGSAAFVRYCD 153 Query 105 GQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLAR 164 G TMLMGDLV+T DE+ DA++A G++QTALHKHL E++PP+WW H G+ LA Sbjct 154 G-TMLMGDLVLTADEVDPTIDALRAAGIEQTALHKHLSEETPPLWWVHFHAMGEPESLAH 212 Query 165 AVRSALDATDTP----PPASATSGQ--TSLDLDTAAIDEALGRSGTIAGGVYKFFIARRD 218 ++ L+ +P P T+ + S +LDT AID LGR G G VY F++RR Sbjct 213 RLKRVLEVGGSPARHRPENQDTTHEPARSPELDTLAIDRELGRKGNREGKVYLVFVSRRK 272 Query 219 PVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIH 278 PVT+ G ++P S+G TA+ FQ G G+ A NGD ++TA EVQ ++ALR GI +V +H Sbjct 273 PVTVHGHVLPGSIGCNTAIMFQALGRGKVAANGDLILTANEVQPAMRALREHGIRLVELH 332 Query 279 NHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 NH DEQPR+F++HFWA DA +AR LRA +D Sbjct 333 NHMLDEQPRVFFLHFWAVGDAAEVARGLRAGLD 365 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/129 (30%), Positives = 66/129 (52%), Gaps = 2/129 (1%) Query 57 LGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVT 116 LGR G +G VY + +R V G + ++ + + F G+ GDL++T Sbjct 253 LGRKGN-REGKVYLVFVSRRK-PVTVHGHVLPGSIGCNTAIMFQALGRGKVAANGDLILT 310 Query 117 EDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTP 176 +E+ A++ G++ LH H+L++ P +++ H GDAA++AR +R+ LD D Sbjct 311 ANEVQPAMRALREHGIRLVELHNHMLDEQPRVFFLHFWAVGDAAEVARGLRAGLDTADMA 370 Query 177 PPASATSGQ 185 PP +G Sbjct 371 PPRKEPTGN 379 >gi|148255054|ref|YP_001239639.1| hypothetical protein BBta_3649 [Bradyrhizobium sp. BTAi1] gi|146407227|gb|ABQ35733.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length=303 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 132/279 (48%), Positives = 183/279 (66%), Gaps = 5/279 (1%) Query 40 ASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAF 99 AS A D DW+ V + LGR ++D V++ F R+DL+V GV + PAL+LG W+AF Sbjct 24 ASAAHAQDVDWQKVDETLGRKPAVSD-DVHRYSFPRTDLAVTLDGVPIKPALALGGWIAF 82 Query 100 ARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDA 159 + G M+MGDLV+ E E+ V + A GL+ TA+H HLL +P ++ H+AGHG+ Sbjct 83 -KPAHGGAMVMGDLVLLETEINPVMAKMIASGLEITAVHNHLLRANPATFYMHVAGHGEP 141 Query 160 ADLARAVRSALDATDTPPPASATSGQT-SLDLDTAAIDEALGRSGTIAGGVYKFFIARRD 218 LA A+ AL + TP A +G + ++DLDTA +D+ +G G GGVY++ + RRD Sbjct 142 VRLASAIHDALAESKTPLVVPAPTGPSPAVDLDTAKLDQIIGVKGQANGGVYQYSVKRRD 201 Query 219 PVTMSGMLIPP--SMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVA 276 +T G + P +MG+A +NFQPTG G+AAI GDFV+T EV V+ ALR GI++ A Sbjct 202 AITQDGTPLTPVGAMGVAIGINFQPTGAGKAAITGDFVLTGDEVNPVILALRAHGIEVTA 261 Query 277 IHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAA 315 +H+H DEQPRLF+MHFWA +DAV LA LRAA+D TA+ Sbjct 262 LHSHMLDEQPRLFFMHFWANDDAVKLAEGLRAALDKTAS 300 >gi|170744209|ref|YP_001772864.1| hypothetical protein M446_6160 [Methylobacterium sp. 4-46] gi|168198483|gb|ACA20430.1| protein of unknown function LppY and LpqO [Methylobacterium sp. 4-46] Length=309 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 127/276 (47%), Positives = 171/276 (62%), Gaps = 17/276 (6%) Query 53 VADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGD 112 +A LG+ G G VY++G R+DL V GVT+ P +LGSW+AF + + Q M+MGD Sbjct 26 IASGLGKAGTEMPGGVYRVGLPRTDLKVTLDGVTLKPTFALGSWLAFRKVGENQAMVMGD 85 Query 113 LVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDA 172 LV+TEDE+ V + GG++ TALH HLL SP + H++GHG+ LA + AL A Sbjct 86 LVLTEDEVNPVMARLLEGGVEITALHNHLLRSSPSTLYMHVSGHGEPGKLATTLMGALGA 145 Query 173 TDTP-----------------PPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIA 215 + TP PA AT + +LDTAAID ALGR G + GGVY + Sbjct 146 SRTPFGAETAAGTPPAGNPSPAPAQATPADQTPNLDTAAIDAALGRKGKLNGGVYAVSVP 205 Query 216 RRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIV 275 R + GM +P +MG A A+NFQPTG+G+AAI GDFV+TA EV V+ ALR GI++ Sbjct 206 RAETPKDHGMEVPEAMGSAIAINFQPTGSGKAAITGDFVLTAKEVNPVLAALRQNGIEVT 265 Query 276 AIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 A+HNH D++PRLF+MHFWA ++A LA+ L A+ Sbjct 266 ALHNHMLDDEPRLFFMHFWANDNAGKLAKGLNEALK 301 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/122 (38%), Positives = 67/122 (55%), Gaps = 2/122 (1%) Query 194 AIDEALGRSGT-IAGGVYKFFIARRD-PVTMSGMLIPPSMGLATALNFQPTGNGRAAING 251 AI LG++GT + GGVY+ + R D VT+ G+ + P+ L + L F+ G +A + G Sbjct 25 AIASGLGKAGTEMPGGVYRVGLPRTDLKVTLDGVTLKPTFALGSWLAFRKVGENQAMVMG 84 Query 252 DFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 D V+T EV V+ L GG++I A+HNH P YMH + LA TL A+ Sbjct 85 DLVLTEDEVNPVMARLLEGGVEITALHNHLLRSSPSTLYMHVSGHGEPGKLATTLMGALG 144 Query 312 AT 313 A+ Sbjct 145 AS 146 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/155 (30%), Positives = 75/155 (49%), Gaps = 2/155 (1%) Query 23 CAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQT 82 AG+ G P + T + D + LGR GKLN G VY + R++ + + Sbjct 155 AAGTPPAGNPSPAPAQATPADQTPNLDTAAIDAALGRKGKLN-GGVYAVSVPRAE-TPKD 212 Query 83 KGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLL 142 G+ V A+ + F T G+ + GD V+T E+ V A++ G++ TALH H+L Sbjct 213 HGMEVPEAMGSAIAINFQPTGSGKAAITGDFVLTAKEVNPVLAALRQNGIEVTALHNHML 272 Query 143 EQSPPIWWTHIAGHGDAADLARAVRSALDATDTPP 177 + P +++ H + +A LA+ + AL + P Sbjct 273 DDEPRLFFMHFWANDNAGKLAKGLNEALKHINVAP 307 >gi|220922216|ref|YP_002497518.1| hypothetical protein Mnod_2235 [Methylobacterium nodulans ORS 2060] gi|219946823|gb|ACL57215.1| protein of unknown function LppY and LpqO [Methylobacterium nodulans ORS 2060] Length=320 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 126/283 (45%), Positives = 172/283 (61%), Gaps = 24/283 (8%) Query 53 VADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGD 112 +A LG+ G G VY++ R+DL+V GV++ PAL+LGSW+AF + + Q M+MGD Sbjct 30 IATGLGKPGTEMPGGVYRVSLPRTDLAVTLDGVSIKPALALGSWLAFRKAGENQVMVMGD 89 Query 113 LVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDA 172 LV+TEDE+ V + GG++ TALH HLL SP + H++GHG+ LA + AL A Sbjct 90 LVLTEDEVNPVMTRLVEGGVEITALHNHLLRASPNPLYMHVSGHGEPGKLAATLMGALGA 149 Query 173 TDTP---------PPAS---------------ATSGQTSLDLDTAAIDEALGRSGTIAGG 208 + TP PPA AT+ + LDTAAI+ ALGR G + GG Sbjct 150 SRTPFGAETATGTPPAGHPGPASAGASPAPARATASDQAQPLDTAAIEAALGRKGKLNGG 209 Query 209 VYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALR 268 VY + R + GM +P +MG A A+NFQPTG G+AAI GDFV+TA EV V++ LR Sbjct 210 VYAVSVPRAETPRDHGMDVPEAMGSAIAINFQPTGGGKAAITGDFVLTADEVNPVIKTLR 269 Query 269 GGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 GI++ A+HNH ++PRLF+MHFWA +D LA+ L AA+ Sbjct 270 QNGIEVTALHNHMLGDEPRLFFMHFWANDDTAKLAKGLGAALK 312 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/122 (38%), Positives = 66/122 (55%), Gaps = 2/122 (1%) Query 194 AIDEALGRSGT-IAGGVYKFFIARRD-PVTMSGMLIPPSMGLATALNFQPTGNGRAAING 251 AI LG+ GT + GGVY+ + R D VT+ G+ I P++ L + L F+ G + + G Sbjct 29 AIATGLGKPGTEMPGGVYRVSLPRTDLAVTLDGVSIKPALALGSWLAFRKAGENQVMVMG 88 Query 252 DFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 D V+T EV V+ L GG++I A+HNH P YMH + LA TL A+ Sbjct 89 DLVLTEDEVNPVMTRLVEGGVEITALHNHLLRASPNPLYMHVSGHGEPGKLAATLMGALG 148 Query 312 AT 313 A+ Sbjct 149 AS 150 >gi|220914849|ref|YP_002490157.1| protein of unknown function LppY and LpqO [Methylobacterium nodulans ORS 2060] gi|219952600|gb|ACL62990.1| protein of unknown function LppY and LpqO [Methylobacterium nodulans ORS 2060] Length=320 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 126/283 (45%), Positives = 172/283 (61%), Gaps = 24/283 (8%) Query 53 VADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGD 112 +A LG+ G G VY++ R+DL+V GV++ PAL+LGSW+AF + + Q M+MGD Sbjct 30 IATGLGKPGTEMPGGVYRVSLPRTDLAVTLDGVSIKPALALGSWLAFRKAGENQVMVMGD 89 Query 113 LVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDA 172 LV+TEDE+ V + GG++ TALH HLL SP + H++GHG+ LA + AL A Sbjct 90 LVLTEDEVNPVMTRLVEGGVEITALHNHLLRASPNPLYMHVSGHGEPETLAATLMGALGA 149 Query 173 TDTP---------PPAS---------------ATSGQTSLDLDTAAIDEALGRSGTIAGG 208 + TP PPA AT+ + LDTAAI+ ALGR G + GG Sbjct 150 SRTPFGAETATGTPPAGHPGPASAGASPAPARATASDQAQPLDTAAIEAALGRKGKLNGG 209 Query 209 VYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALR 268 VY + R + GM +P +MG A A+NFQPTG G+AAI GDFV+TA EV V++ LR Sbjct 210 VYAVSVPRAETPRDHGMDVPEAMGSAIAINFQPTGGGKAAITGDFVLTADEVNPVIKTLR 269 Query 269 GGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 GI++ A+HNH ++PRLF+MHFWA +D LA+ L AA+ Sbjct 270 QNGIEVTALHNHMLGDEPRLFFMHFWANDDTAKLAKGLGAALK 312 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 46/122 (38%), Positives = 66/122 (55%), Gaps = 2/122 (1%) Query 194 AIDEALGRSGT-IAGGVYKFFIARRD-PVTMSGMLIPPSMGLATALNFQPTGNGRAAING 251 AI LG+ GT + GGVY+ + R D VT+ G+ I P++ L + L F+ G + + G Sbjct 29 AIATGLGKPGTEMPGGVYRVSLPRTDLAVTLDGVSIKPALALGSWLAFRKAGENQVMVMG 88 Query 252 DFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVD 311 D V+T EV V+ L GG++I A+HNH P YMH + LA TL A+ Sbjct 89 DLVLTEDEVNPVMTRLVEGGVEITALHNHLLRASPNPLYMHVSGHGEPETLAATLMGALG 148 Query 312 AT 313 A+ Sbjct 149 AS 150 >gi|289749101|ref|ZP_06508479.1| lipoprotein lpqO [Mycobacterium tuberculosis T92] gi|289689688|gb|EFD57117.1| lipoprotein lpqO [Mycobacterium tuberculosis T92] Length=173 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 136/151 (91%), Positives = 137/151 (91%), Gaps = 1/151 (0%) Query 1 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT 60 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT Sbjct 8 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT 67 Query 61 GKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDEL 120 GKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDEL Sbjct 68 GKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDEL 127 Query 121 ASVTDAVQAGGLQQTALHKHLLEQS-PPIWW 150 ASVTDAVQAG + S PPIWW Sbjct 128 ASVTDAVQAGRPAADRAAQAPARSSRPPIWW 158 >gi|289749102|ref|ZP_06508480.1| lipoprotein lpqO [Mycobacterium tuberculosis T92] gi|289689689|gb|EFD57118.1| lipoprotein lpqO [Mycobacterium tuberculosis T92] Length=118 Score = 231 bits (590), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 113/118 (96%), Positives = 114/118 (97%), Gaps = 0/118 (0%) Query 199 LGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAA 258 +GRSGT AGGVYKFFIARRDPVTMSGMLIPPSMGLAT LNF PTGNGRAAI GDFVMTAA Sbjct 1 MGRSGTFAGGVYKFFIARRDPVTMSGMLIPPSMGLATGLNFPPTGNGRAAIIGDFVMTAA 60 Query 259 EVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAAR 316 EVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAAR Sbjct 61 EVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDATAAR 118 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 41/117 (36%), Positives = 67/117 (58%), Gaps = 2/117 (1%) Query 57 LGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVT 116 +GR+G G VYK AR D V G+ + P++ L + + F T +G+ ++GD V+T Sbjct 1 MGRSGTFA-GGVYKFFIARRD-PVTMSGMLIPPSMGLATGLNFPPTGNGRAAIIGDFVMT 58 Query 117 EDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDAT 173 E+ V A++ GG+ A+H H ++ P +++ H DA LAR +R+A+DAT Sbjct 59 AAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 115 >gi|339009511|ref|ZP_08642083.1| LysM domain protein [Brevibacillus laterosporus LMG 15441] gi|338773989|gb|EGP33520.1| LysM domain protein [Brevibacillus laterosporus LMG 15441] Length=309 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 114/312 (37%), Positives = 176/312 (57%), Gaps = 14/312 (4%) Query 8 RMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRTGKLNDGS 67 R LL+ + L A G K + + R + ++ D W+ V + + ND Sbjct 3 RSFLLLSIFTVLLVALVGIM-KFQSEAVSKRNSEISQEQDPKWESVKRVFNKGSIQND-- 59 Query 68 VYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAV 127 V+++ F RSDL ++ V + P L+L S++AF + +M+MGDLV+ E E+ V + Sbjct 60 VFRVTFPRSDLQIKVDHVQIDPNLALTSYLAFKQV-GNHSMMMGDLVLLEKEVKPVETKL 118 Query 128 QAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTP----PPASATS 183 G++ TALH H++E++P I + H+AGHGD +LA ++ AL T TP PP + S Sbjct 119 AELGIEITALHNHIIEENPKIMYLHVAGHGDPVNLAEKMKDALSVTGTPLASTPPEKSPS 178 Query 184 GQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQPTG 243 + + +++ +G G G V++F I R + +T G+ IPP+MG+A +NFQ G Sbjct 179 -----TFNWSKVEDIIGWKGVQRGKVFQFSIPRPEKITEKGVGIPPAMGIAMPINFQLIG 233 Query 244 NGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAVALA 303 +AA GDFV+ + EV VV+ L GI + AIHNH DE PRLF++HFW ++ LA Sbjct 234 E-KAATTGDFVLLSNEVNPVVRELTKNGITVTAIHNHMLDESPRLFFLHFWGVDEPEKLA 292 Query 304 RTLRAAVDATAA 315 R LRAA++ T Sbjct 293 RGLRAALNQTTV 304 >gi|282163979|ref|YP_003356364.1| hypothetical protein MCP_1309 [Methanocella paludicola SANAE] gi|282156293|dbj|BAI61381.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length=299 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 103/274 (38%), Positives = 160/274 (59%), Gaps = 3/274 (1%) Query 40 ASLATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAF 99 S+A W PV +G+ G+++ V R DLSV G+ +AP + +F Sbjct 25 VSVAQDDRGYWAPVEQAMGKKGEVSPDGVVTFVIPR-DLSVTLDGIRLAPGSDMSHEFSF 83 Query 100 ARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDA 159 RT +G TM++G++++ EDE+A VT + A G+ +TALH HLL + P I W H+ +GD Sbjct 84 MRTSEG-TMMVGEIMLKEDEVAGVTQKLLAAGITETALHNHLLRERPHIMWLHVHANGDP 142 Query 160 ADLARAVRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDP 219 +A+A+ + + D P A+ + LDTA +D +G G GVY + + R D Sbjct 143 VPVAKALNNIITPLDGGP-ATVSQHVPLSQLDTARLDAIIGLQGKAEDGVYAYSVPRADK 201 Query 220 VTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHN 279 + M G+ +PP M ++T ++FQPTG G+AA+ G+FV+ +EV V+ L G+++ A+H+ Sbjct 202 INMGGVELPPDMDISTRISFQPTGQGKAAVIGEFVLEKSEVSPVLARLADNGVEVTALHS 261 Query 280 HGFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 313 H +EQPRLFYMH WA D +A +R A+D T Sbjct 262 HMINEQPRLFYMHCWAVGDPAVIAGAMRKALDKT 295 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/145 (32%), Positives = 76/145 (53%), Gaps = 3/145 (2%) Query 32 PDDGGDRGASL-ATTSDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPA 90 P DGG S S D + I+G GK DG VY R+D + GV + P Sbjct 155 PLDGGPATVSQHVPLSQLDTARLDAIIGLQGKAEDG-VYAYSVPRAD-KINMGGVELPPD 212 Query 91 LSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWW 150 + + + ++F T G+ ++G+ V+ + E++ V + G++ TALH H++ + P +++ Sbjct 213 MDISTRISFQPTGQGKAAVIGEFVLEKSEVSPVLARLADNGVEVTALHSHMINEQPRLFY 272 Query 151 THIAGHGDAADLARAVRSALDATDT 175 H GD A +A A+R ALD T++ Sbjct 273 MHCWAVGDPAVIAGAMRKALDKTNS 297 >gi|153940690|ref|YP_001390103.1| LysM domain-containing protein [Clostridium botulinum F str. Langeland] gi|152936586|gb|ABS42084.1| LysM domain protein [Clostridium botulinum F str. Langeland] gi|295318196|gb|ADF98573.1| LysM domain protein [Clostridium botulinum F str. 230613] Length=325 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 103/266 (39%), Positives = 150/266 (57%), Gaps = 5/266 (1%) Query 46 SDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDG 105 ++ D + + +I + G G V+K F R DL V+ G+ + P L+L SWVAF R Sbjct 62 TNYDLETIKNIFSQEGA-TAGGVFKFTFPRFDLEVRIDGIIIEPDLALTSWVAFNRL-GN 119 Query 106 QTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARA 165 +M+MGDLV+ E+E+ V ++ G++ TALH HLL +SP I + HI G GD LA++ Sbjct 120 HSMMMGDLVLLENEVDPVMSSLIENGIEVTALHNHLLHESPRIMYLHIKGEGDPIKLAQS 179 Query 166 VRSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGM 225 V++AL T T P + Q +D I+E LG G+ G V + + R ++ Sbjct 180 VKNALSLTTT--PFNIKKQQPPSQIDWTVIEEILGHKGSHKGKVLQLSVPRTTIISEDAH 237 Query 226 LIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQ 285 + P+MG++ A+NFQ G A GDFV+ A EV V+ L+ I + AIHNH E Sbjct 238 QLSPAMGISHAINFQSVGRN-VATTGDFVLLANEVNPVISILKKNNIAVTAIHNHMLTEV 296 Query 286 PRLFYMHFWAENDAVALARTLRAAVD 311 PRLF+MHFWA + LA+ RA +D Sbjct 297 PRLFFMHFWAVDKPKKLAQAFRAVLD 322 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/197 (30%), Positives = 95/197 (49%), Gaps = 17/197 (8%) Query 123 VTDAVQAGGLQQTALHKH-----LLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPP 177 +T VQ G T H+ +L S I+W H G + V + Sbjct 2 ITYKVQYGDTLYTIAHRFGICIGMLALSNNIFWPHQIFEGQELLIPIPVSNK-------- 53 Query 178 PASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRD-PVTMSGMLIPPSMGLATA 236 ++ + +T+ DL+T I + G AGGV+KF R D V + G++I P + L + Sbjct 54 NLNSRNHRTNYDLET--IKNIFSQEGATAGGVFKFTFPRFDLEVRIDGIIIEPDLALTSW 111 Query 237 LNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAE 296 + F GN + + GD V+ EV V+ +L GI++ A+HNH E PR+ Y+H E Sbjct 112 VAFNRLGN-HSMMMGDLVLLENEVDPVMSSLIENGIEVTALHNHLLHESPRIMYLHIKGE 170 Query 297 NDAVALARTLRAAVDAT 313 D + LA++++ A+ T Sbjct 171 GDPIKLAQSVKNALSLT 187 >gi|73669551|ref|YP_305566.1| hypothetical protein Mbar_A2052 [Methanosarcina barkeri str. Fusaro] gi|72396713|gb|AAZ70986.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length=311 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 104/270 (39%), Positives = 156/270 (58%), Gaps = 6/270 (2%) Query 49 DWKPVADILGRTGKLN-DGSVYKIGFARS-DLSVQTKGVTVAPALSLGSWVAFARTPDGQ 106 DW+ V +G G ++ DG+ I FA L+V G+ + PA F R D + Sbjct 40 DWQSVEKAMGEKGNVSPDGA---ITFAIPMTLNVTLDGIKLNPASERYHEFDFMRAGD-K 95 Query 107 TMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV 166 M++G++ VTE+E+ +V+D V GLQ TA+H HLL SP I W HI G+GD AD+A+ + Sbjct 96 AMMVGEIGVTEEEVKNVSDMVLQSGLQVTAIHNHLLRTSPHIIWIHIYGYGDPADMAKKI 155 Query 167 RSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGML 226 R+ D + AS + S ++T +D +G G+ GG Y + I R D + M+G Sbjct 156 RNITDYVNRGSSASESEKFQSKGINTTELDRIIGDKGSAEGGDYNYEIPRADKIQMNGYT 215 Query 227 IPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQP 286 + P M ++T ++FQP G G AA+ G+F + EV+ VV+ L GI++ A+H+H EQP Sbjct 216 LSPVMDVSTPISFQPLGKGNAAVIGEFALEENEVEPVVRTLTANGIEVTALHSHMITEQP 275 Query 287 RLFYMHFWAENDAVALARTLRAAVDATAAR 316 RLFY+H WA DA LA +R A++ T + Sbjct 276 RLFYVHCWATGDAAELAGIMREALNETNIK 305 >gi|170754998|ref|YP_001780388.1| LysM domain-containing protein [Clostridium botulinum B1 str. Okra] gi|169120210|gb|ACA44046.1| LysM domain protein [Clostridium botulinum B1 str. Okra] Length=325 Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 100/263 (39%), Positives = 149/263 (57%), Gaps = 5/263 (1%) Query 49 DWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTM 108 D + + +I + G G V+K F R DL V+ G+ + P L+L SWVAF + + +M Sbjct 65 DLETIKNIFSQKGT-TAGGVFKFTFPRFDLKVRIDGIIIEPDLALTSWVAFNQLGN-HSM 122 Query 109 LMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRS 168 +MGDLV+ E+E+ + ++ G++ TALH HLL +SP I + HI G GD+ LA +V++ Sbjct 123 IMGDLVLLENEVGPIMSSLTENGIEVTALHNHLLHESPRIMYLHIKGEGDSIKLAESVKN 182 Query 169 ALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIP 228 AL T T P + + Q +D I+E LG G G V + + R ++ G + Sbjct 183 ALSLTTT--PFNIKNQQPPSQIDWTVIEEILGHKGFHKGKVLQLSVPRTTIISEDGHQLS 240 Query 229 PSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRL 288 P+MG++ A+NFQ G A GDFV+ A EV V+ L+ I + AIHNH E PRL Sbjct 241 PAMGISHAINFQSVGRN-VATTGDFVLLANEVNPVISILKKNNIAVTAIHNHMLTEVPRL 299 Query 289 FYMHFWAENDAVALARTLRAAVD 311 F+MHFWA + LA+ R ++ Sbjct 300 FFMHFWAVDKPEKLAQAFRDVLN 322 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/197 (31%), Positives = 95/197 (49%), Gaps = 17/197 (8%) Query 123 VTDAVQAGGLQQTALHKH-----LLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPP 177 +T VQ G T H+ +L S I+W H G + AV + Sbjct 2 ITYKVQYGDTLYTIAHRFGIYIGMLALSNNIFWPHQIFEGQELLIPIAVLNK-------- 53 Query 178 PASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRD-PVTMSGMLIPPSMGLATA 236 ++ + + DL+T I + GT AGGV+KF R D V + G++I P + L + Sbjct 54 DLNSRNHRAKYDLET--IKNIFSQKGTTAGGVFKFTFPRFDLKVRIDGIIIEPDLALTSW 111 Query 237 LNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAE 296 + F GN + I GD V+ EV ++ +L GI++ A+HNH E PR+ Y+H E Sbjct 112 VAFNQLGN-HSMIMGDLVLLENEVGPIMSSLTENGIEVTALHNHLLHESPRIMYLHIKGE 170 Query 297 NDAVALARTLRAAVDAT 313 D++ LA +++ A+ T Sbjct 171 GDSIKLAESVKNALSLT 187 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/126 (25%), Positives = 60/126 (48%), Gaps = 3/126 (2%) Query 46 SDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDG 105 S DW + +ILG G + G V ++ R+ + + G ++PA+ + + F ++ Sbjct 200 SQIDWTVIEEILGHKG-FHKGKVLQLSVPRTTI-ISEDGHQLSPAMGISHAINF-QSVGR 256 Query 106 QTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARA 165 GD V+ +E+ V ++ + TA+H H+L + P +++ H LA+A Sbjct 257 NVATTGDFVLLANEVNPVISILKKNNIAVTAIHNHMLTEVPRLFFMHFWAVDKPEKLAQA 316 Query 166 VRSALD 171 R L+ Sbjct 317 FRDVLN 322 >gi|148378747|ref|YP_001253288.1| LysM domain protein [Clostridium botulinum A str. ATCC 3502] gi|153931890|ref|YP_001383135.1| LysM domain-containing protein [Clostridium botulinum A str. ATCC 19397] gi|153934622|ref|YP_001386683.1| LysM domain-containing protein [Clostridium botulinum A str. Hall] gi|148288231|emb|CAL82304.1| putative peptidoglycan binding protein [Clostridium botulinum A str. ATCC 3502] gi|152927934|gb|ABS33434.1| LysM domain protein [Clostridium botulinum A str. ATCC 19397] gi|152930536|gb|ABS36035.1| LysM domain protein [Clostridium botulinum A str. Hall] Length=325 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/263 (39%), Positives = 148/263 (57%), Gaps = 5/263 (1%) Query 49 DWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTM 108 D + + +I + G G V K F R DL V+ G+ + P L+L SWVAF + + +M Sbjct 65 DLETIKNIFSQEGT-TTGGVLKFTFPRFDLKVRINGIIIEPDLALTSWVAFNQLGN-HSM 122 Query 109 LMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRS 168 +MGDLV+ E+E+ + ++ G++ TALH HLL +SP I + HI G GD LA++V++ Sbjct 123 MMGDLVLLENEVGPIMSSLIENGIEVTALHNHLLHESPRIMYLHIKGEGDPIKLAQSVKN 182 Query 169 ALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIP 228 AL T T P + Q +D I+ LG G+ G V + + R ++ G + Sbjct 183 ALSLTTT--PFNIKKQQPPSQIDWTVIEGILGHKGSHKGKVLQLSVPRTTIISEDGHQLS 240 Query 229 PSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRL 288 P+MG++ A+NFQ G A GDFV+ A EV V+ L+ I + AIHNH E PRL Sbjct 241 PAMGISHAINFQSVGRN-VATTGDFVLLANEVNPVISILKKNNIAVTAIHNHMLTEVPRL 299 Query 289 FYMHFWAENDAVALARTLRAAVD 311 F+MHFWA + LA+ RA +D Sbjct 300 FFMHFWAIDKPEKLAQAFRAVLD 322 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 58/197 (30%), Positives = 88/197 (45%), Gaps = 17/197 (8%) Query 123 VTDAVQAGGLQQTALHKH-----LLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTPP 177 +T VQ G T H+ +L S I+W H G + AV P Sbjct 2 ITYKVQYGDTLYTIAHRLGICIGMLALSNNIFWPHQIFEGQELLIPIAV----------P 51 Query 178 PASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRD-PVTMSGMLIPPSMGLATA 236 S D I + GT GGV KF R D V ++G++I P + L + Sbjct 52 NKDLNSRNHRAKYDLETIKNIFSQEGTTTGGVLKFTFPRFDLKVRINGIIIEPDLALTSW 111 Query 237 LNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAE 296 + F GN + + GD V+ EV ++ +L GI++ A+HNH E PR+ Y+H E Sbjct 112 VAFNQLGN-HSMMMGDLVLLENEVGPIMSSLIENGIEVTALHNHLLHESPRIMYLHIKGE 170 Query 297 NDAVALARTLRAAVDAT 313 D + LA++++ A+ T Sbjct 171 GDPIKLAQSVKNALSLT 187 >gi|282163980|ref|YP_003356365.1| hypothetical protein MCP_1310 [Methanocella paludicola SANAE] gi|282156294|dbj|BAI61382.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length=320 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 109/276 (40%), Positives = 156/276 (57%), Gaps = 12/276 (4%) Query 43 ATTSDAD-WKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFAR 101 A SDA W V + +G G + G VYK V+ V + PA++ SWV+F R Sbjct 43 AAESDASYWNKVDEAVGIKGTMLAGGVYKTELPPGVPDVKVGDVLLRPAMAADSWVSFVR 102 Query 102 TPDGQTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAAD 161 D + M+MGD+VV +L V G+ TA+H L+ +SP ++ HI+G G+AA Sbjct 103 MGD-EAMMMGDIVVPAGDLGPVQRRFVEEGIDITAIHNTLVGESPQVYDMHISGRGNAAV 161 Query 162 LARAVRSALDATDTPP----PASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARR 217 +A +VR+AL+ + PA +SGQ +DEA+G G GVY + + R Sbjct 162 MAASVRAALEQVNVTHEEVMPAPGSSGQLK------RLDEAMGYRGRAENGVYVYEVPRA 215 Query 218 DPVTMSGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAI 277 + +TM GM IP +M ++T + FQP G G+AAI GDF++ EV+ V++ L GI + A+ Sbjct 216 ERITMDGMEIPSTMDVSTTIKFQPLGGGKAAITGDFILRPDEVKTVMKTLSENGIVVTAL 275 Query 278 HNHGFDEQPRLFYMHFWAENDAVALARTLRAAVDAT 313 H H E+PRLF MHFWA D ALA+ LR A+D T Sbjct 276 HTHMLTEEPRLFMMHFWATGDEAALAKALRQALDNT 311 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/136 (28%), Positives = 69/136 (51%), Gaps = 2/136 (1%) Query 46 SDADWKPVADILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDG 105 S K + + +G G+ +G VY R++ + G+ + + + + + F G Sbjct 186 SSGQLKRLDEAMGYRGRAENG-VYVYEVPRAE-RITMDGMEIPSTMDVSTTIKFQPLGGG 243 Query 106 QTMLMGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARA 165 + + GD ++ DE+ +V + G+ TALH H+L + P ++ H GD A LA+A Sbjct 244 KAAITGDFILRPDEVKTVMKTLSENGIVVTALHTHMLTEEPRLFMMHFWATGDEAALAKA 303 Query 166 VRSALDATDTPPPASA 181 +R ALD T++ P +A Sbjct 304 LRQALDNTNSLRPYNA 319 >gi|295133340|ref|YP_003584016.1| LppY/LpqO family protein [Zunongwangia profunda SM-A87] gi|294981355|gb|ADF51820.1| LppY/LpqO family protein [Zunongwangia profunda SM-A87] Length=324 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 107/315 (34%), Positives = 163/315 (52%), Gaps = 16/315 (5%) Query 12 LLAAAALALTACAGSDDKGEPDDGG----DRGASLATTSDADWKP-----VADILGRTGK 62 +L + L +C G D K E D ++ + D + P + +++G G Sbjct 6 VLISTVFLLLSCNGHDGKKENADSSRPSSEKQKEIEQQEDMERHPLNITAIREVIGIKGT 65 Query 63 LNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELAS 122 N+G YK+ ++DL + G + P + LGSW AF+ +G M+MGD+VVTED+L Sbjct 66 ENNGE-YKVVVPQNDLEIMVDGFKIIPPMGLGSWAAFSAIKEG-AMVMGDIVVTEDDLWP 123 Query 123 VTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDTP---PPA 179 V V GL TA+H H + +P + + HI G G+ LA V++ D PA Sbjct 124 VQQEVIRQGLTITAIHNHFVRNNPNVMYMHIGGMGEEGVLAEKVKALFDKVVEVRGGNPA 183 Query 180 SATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRD-PVTMSGMLIPPSMGLATALN 238 ++ + LDT ID +G SG + GVYK I R D + G + MG T + Sbjct 184 ASEPSEVENTLDTDRIDNIIGHSGNLNNGVYKITIGRPDVDLREHGAPVSTFMGFNTWAS 243 Query 239 FQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAEND 298 +Q T +AA+ GDF M A E+ V++AL GI++VA+HNH E+PR+F++H+W Sbjct 244 WQGTPE-KAAVAGDFTMLADEIAPVIKALVENGIEVVAVHNHMVYEEPRIFFLHYWGVGP 302 Query 299 AVALARTLRAAVDAT 313 A LA L+ A++ T Sbjct 303 AEKLAHGLKTALNQT 317 >gi|108760499|ref|YP_630020.1| LppY/LpqO family protein [Myxococcus xanthus DK 1622] gi|108464379|gb|ABF89564.1| LppY/LpqO family protein [Myxococcus xanthus DK 1622] Length=310 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 106/273 (39%), Positives = 149/273 (55%), Gaps = 17/273 (6%) Query 54 ADILGRTGKLN----DGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTML 109 ADI RTG D V+K+ R+DL V GV + P L L +W AF R D TM+ Sbjct 40 ADIERRTGAKGELSADEGVFKVNLPRTDLKVGAAGVKLIPPLGLTAWAAFKRVGDA-TMV 98 Query 110 MGDLVVTEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAV--- 166 MGD+V+ ED++ V D GL+ TALH H + P + + HI+G G+ A LA AV Sbjct 99 MGDIVLLEDQVNPVMDVALQNGLEVTALHNHFFWEQPKVMFMHISGMGETARLADAVGKV 158 Query 167 ----RSALDATDTPPPASATSGQTSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTM 222 R P AS ++ LD+ +D LG+ GT GVYK + R V + Sbjct 159 FTRLRETAGGKGRVPRASVDPARSKLDV--TKLDALLGQKGTSKDGVYKVTVGR--TVRI 214 Query 223 SGMLIPPSMGLATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGF 282 G + +MG+ T F T +A ++GDF + +E+Q V++ALR IDIVAIHNH Sbjct 215 YGHEMGKAMGVNTWAAFAGTPQ-QAVVDGDFAILESELQPVLKALRAANIDIVAIHNHMT 273 Query 283 DEQPRLFYMHFWAENDAVALARTLRAAVDATAA 315 E+PR+ ++H+W A ALAR +R+A++ T A Sbjct 274 GEEPRMLFLHYWGVGPADALARGVRSAMELTLA 306 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/121 (37%), Positives = 66/121 (55%), Gaps = 5/121 (4%) Query 56 ILGRTGKLNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVV 115 +LG+ G DG VYK+ R+ V+ G + A+ + +W AFA TP Q ++ GD + Sbjct 192 LLGQKGTSKDG-VYKVTVGRT---VRIYGHEMGKAMGVNTWAAFAGTPQ-QAVVDGDFAI 246 Query 116 TEDELASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDT 175 E EL V A++A + A+H H+ + P + + H G G A LAR VRSA++ T Sbjct 247 LESELQPVLKALRAANIDIVAIHNHMTGEEPRMLFLHYWGVGPADALARGVRSAMELTLA 306 Query 176 P 176 P Sbjct 307 P 307 >gi|186473934|ref|YP_001861276.1| protein of unknown function LppY and LpqO [Burkholderia phymatum STM815] gi|184196266|gb|ACC74230.1| protein of unknown function LppY and LpqO [Burkholderia phymatum STM815] Length=307 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 93/256 (37%), Positives = 141/256 (56%), Gaps = 10/256 (3%) Query 67 SVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDA 126 V+KI R+D+ VQ G+T+ P + L S+ AF Q M+MGD + EDE+ A Sbjct 52 KVFKISKPRNDVKVQVDGLTMPPFMGLTSYAAFKPAQGSQVMMMGDTALFEDEVNPAMSA 111 Query 127 VQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALD-----ATDTPPPASA 181 GL+ TALH H P +++ HI GHGDAA LA V+ D + P SA Sbjct 112 ALDAGLEVTALHNHFFFDQPKVYFMHIGGHGDAAKLAEGVKKVYDRIAEVRSAHADPESA 171 Query 182 TSGQTS--LDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNF 239 GQ + + A ++ G G + G++K + R +M G+ + MG+ T F Sbjct 172 FPGQIANPSSISPAPLEVVFGSKGQTSKGMFKVVVGRT--ASMQGVTVGNEMGVNTWAAF 229 Query 240 QPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDA 299 T + A ++GDF M +E+Q V++++R GI+IVAIH H DE PR+ ++H+W + A Sbjct 230 AGT-DDEAVVDGDFAMRESELQAVLKSMRASGINIVAIHQHMTDETPRILFLHYWGKGKA 288 Query 300 VALARTLRAAVDATAA 315 V LA+ ++AA+DA +A Sbjct 289 VDLAKGVKAALDAQSA 304 >gi|85374994|ref|YP_459056.1| lipoprotein lpqo [Erythrobacter litoralis HTCC2594] gi|84788077|gb|ABC64259.1| probable conserved lipoprotein lpqo [Erythrobacter litoralis HTCC2594] Length=286 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/240 (41%), Positives = 138/240 (58%), Gaps = 12/240 (5%) Query 63 LNDGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELAS 122 + D V +IG+ R+D+ V G+ + P LGSW AF + DG M+MGD VV EDE+ + Sbjct 28 MTDDGVARIGWTRADVPVMVDGMRLDPPAGLGSWAAF-KPVDGGVMVMGDTVVFEDEITA 86 Query 123 VTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATD-----TPP 177 DA A GL TALH H + PP+++ HI GHG+ A +A V++ DA +P Sbjct 87 AMDAALANGLTVTALHNHFIFDDPPVYFMHIGGHGETAKMAAGVKAVWDAIKEVRAASPT 146 Query 178 PASATSGQT---SLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLA 234 P + G T + ++ A+ E LG +IA GV K+ AR+ M G+ I SMGL Sbjct 147 PQRSFGGMTPDANGTIEALALSEILGTEPSIADGVVKYTFARQG--RMHGVEIGGSMGLT 204 Query 235 TALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFW 294 T F T N AA++GDF+MT EVQ V++ALR I IVA+HNH +P +++H+W Sbjct 205 TWAAFSGT-NDLAAVDGDFIMTEDEVQPVLRALRERDIHIVALHNHMIGGEPMFYFLHYW 263 >gi|134288083|ref|YP_001110247.1| hypothetical protein Bcep1808_7483 [Burkholderia vietnamiensis G4] gi|134288162|ref|YP_001110325.1| protein of unknown function LppY and LpqO [Burkholderia vietnamiensis G4] gi|134291515|ref|YP_001115284.1| protein of unknown function LppY and LpqO [Burkholderia vietnamiensis G4] gi|134295765|ref|YP_001119500.1| hypothetical protein Bcep1808_1659 [Burkholderia vietnamiensis G4] gi|134132733|gb|ABO60359.1| protein of unknown function LppY and LpqO [Burkholderia vietnamiensis G4] gi|134132812|gb|ABO59522.1| protein of unknown function LppY and LpqO [Burkholderia vietnamiensis G4] gi|134134704|gb|ABO59029.1| protein of unknown function LppY and LpqO [Burkholderia vietnamiensis G4] gi|134138922|gb|ABO54665.1| protein of unknown function LppY and LpqO [Burkholderia vietnamiensis G4] Length=307 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 108/322 (34%), Positives = 166/322 (52%), Gaps = 27/322 (8%) Query 1 MIRRRGARMAALLAAAALALTACAGSDDKGEPDDGGDRGASLATTSDADWKPVADILGRT 60 M++R R L A+ AL A S G P ++ TTS + + G Sbjct 1 MLKRSLFRRTVL--ASLFALVAVNASAAAGSP--------AMDTTS------IEQVTGLK 44 Query 61 GKLN-DGSVYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDE 119 G + D +V+K+ R+D+ +Q T+ P + L SW AF GQTM+MGD V+ +DE Sbjct 45 GTFSKDENVFKVTKPRNDIKIQVDNWTMPPFMGLTSWAAFTPGHHGQTMMMGDTVLFDDE 104 Query 120 LASVTDAVQAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALDATDT---- 175 + A GL+ TALH H P +++ HI G GDA LA VR D Sbjct 105 VNPAMSAALDAGLEVTALHNHFFFDHPRVYFMHIGGSGDAKTLAEGVRKIYDRIAEVRAA 164 Query 176 -PPPASATSGQT--SLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMG 232 PA+A G+ + + +A ++ LGR G G++K I + P++M G+ + MG Sbjct 165 HAEPANAFPGRIADASSITSAPLEAILGRKGQTNSGMFKVSIGK--PISMHGVSVGNEMG 222 Query 233 LATALNFQPTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMH 292 + T F T + A ++GDF M +E+Q V++++R GI+IVAIH H E PR+ ++H Sbjct 223 VNTWAAFAGT-DDEAVVDGDFAMRESELQTVLKSMRASGINIVAIHEHMTGETPRVLFLH 281 Query 293 FWAENDAVALARTLRAAVDATA 314 +W + AV LA+ ++ A+ A A Sbjct 282 YWGKGKAVDLAKAVKGALVAQA 303 >gi|323525653|ref|YP_004227806.1| hypothetical protein BC1001_1305 [Burkholderia sp. CCGE1001] gi|323382655|gb|ADX54746.1| protein of unknown function LppY and LpqO [Burkholderia sp. CCGE1001] Length=308 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 92/255 (37%), Positives = 139/255 (55%), Gaps = 10/255 (3%) Query 68 VYKIGFARSDLSVQTKGVTVAPALSLGSWVAFARTPDGQTMLMGDLVVTEDELASVTDAV 127 V+K+ R+D+ VQ G ++ P + L S+ AF Q ++MGD V+ EDE+ A Sbjct 54 VFKVSKPRNDIKVQVDGWSMPPFMGLTSYAAFKPVHGSQAIMMGDTVLFEDEVNPAMSAA 113 Query 128 QAGGLQQTALHKHLLEQSPPIWWTHIAGHGDAADLARAVRSALD-----ATDTPPPASAT 182 GL+ TALH H P +++ HI GHGDAA LA VR D + P SA Sbjct 114 LDAGLEVTALHNHFFFDQPKVYFMHIGGHGDAAKLAEGVRKVYDRIAEVRSAHADPESAF 173 Query 183 SGQ--TSLDLDTAAIDEALGRSGTIAGGVYKFFIARRDPVTMSGMLIPPSMGLATALNFQ 240 GQ + + A ++ G G G++K + R+ M G+ + MG+ T F Sbjct 174 PGQIGSPSSISPAPLEAVFGSKGQTNNGMFKVVVGRK--ANMHGVAVGNEMGVNTWAAFA 231 Query 241 PTGNGRAAINGDFVMTAAEVQDVVQALRGGGIDIVAIHNHGFDEQPRLFYMHFWAENDAV 300 T + A ++GDF M +E+Q V++++R GI+IVAIH H DE PR+ ++H+W + AV Sbjct 232 GT-DDEAVVDGDFAMRESELQAVLKSMRASGINIVAIHQHMTDETPRILFLHYWGKGKAV 290 Query 301 ALARTLRAAVDATAA 315 LA+ ++AA+DA A Sbjct 291 DLAKGVKAALDAQNA 305 Lambda K H 0.318 0.132 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 549222890922 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40