BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0607 Length=128 Score E Sequences producing significant alignments: (Bits) Value gi|148821809|ref|YP_001286563.1| hypothetical protein TBFG_10618... 259 1e-67 gi|15607747|ref|NP_215121.1| hypothetical protein Rv0607 [Mycoba... 257 4e-67 gi|15840007|ref|NP_335044.1| hypothetical protein MT0636 [Mycoba... 248 3e-64 gi|120405235|ref|YP_955064.1| hypothetical protein Mvan_4281 [My... 110 8e-23 gi|120404207|ref|YP_954036.1| hypothetical protein Mvan_3229 [My... 109 1e-22 gi|315444406|ref|YP_004077285.1| hypothetical protein Mspyr1_282... 108 3e-22 gi|145224069|ref|YP_001134747.1| hypothetical protein Mflv_3485 ... 107 5e-22 gi|269128990|ref|YP_003302360.1| hypothetical protein Tcur_4805 ... 46.6 0.001 gi|336325384|ref|YP_004605350.1| histidinol-phosphate aminotrans... 37.0 0.85 gi|61874330|ref|XP_588793.1| PREDICTED: adenylate kinase isoenzy... 35.0 3.3 gi|169629754|ref|YP_001703403.1| histidinol-phosphate aminotrans... 35.0 3.8 gi|15827644|ref|NP_301907.1| histidinol-phosphate aminotransfera... 34.7 4.9 gi|149913743|ref|ZP_01902275.1| hypothetical protein RAZWK3B_171... 34.7 5.1 gi|344278611|ref|XP_003411087.1| PREDICTED: adenylate kinase iso... 34.7 5.1 gi|313906335|ref|ZP_07839677.1| conserved hypothetical protein [... 34.7 5.1 gi|118466104|ref|YP_882369.1| histidinol-phosphate aminotransfer... 34.3 6.1 gi|254775633|ref|ZP_05217149.1| histidinol-phosphate aminotransf... 34.3 6.4 gi|41407392|ref|NP_960228.1| histidinol-phosphate aminotransfera... 34.3 6.4 gi|258645672|ref|ZP_05733141.1| ATP-dependent protease HslVU, pe... 33.9 7.4 gi|313892579|ref|ZP_07826166.1| ATP-dependent protease HslVU, pe... 33.9 7.7 >gi|148821809|ref|YP_001286563.1| hypothetical protein TBFG_10618 [Mycobacterium tuberculosis F11] gi|167969031|ref|ZP_02551308.1| hypothetical protein MtubH3_13782 [Mycobacterium tuberculosis H37Ra] gi|253797541|ref|YP_003030542.1| hypothetical protein TBMG_00614 [Mycobacterium tuberculosis KZN 1435] 34 more sequence titles Length=156 Score = 259 bits (661), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%) Query 1 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 60 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW Sbjct 29 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 88 Query 61 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDLV 120 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDLV Sbjct 89 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDLV 148 Query 121 RGAHAESA 128 RGAHAESA Sbjct 149 RGAHAESA 156 >gi|15607747|ref|NP_215121.1| hypothetical protein Rv0607 [Mycobacterium tuberculosis H37Rv] gi|31791789|ref|NP_854282.1| hypothetical protein Mb0623 [Mycobacterium bovis AF2122/97] gi|121636525|ref|YP_976748.1| hypothetical protein BCG_0653 [Mycobacterium bovis BCG str. Pasteur 1173P2] 39 more sequence titles Length=128 Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 127/128 (99%), Positives = 128/128 (100%), Gaps = 0/128 (0%) Query 1 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 60 +GAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW Sbjct 1 MGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 60 Query 61 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDLV 120 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDLV Sbjct 61 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDLV 120 Query 121 RGAHAESA 128 RGAHAESA Sbjct 121 RGAHAESA 128 >gi|15840007|ref|NP_335044.1| hypothetical protein MT0636 [Mycobacterium tuberculosis CDC1551] gi|13880150|gb|AAK44858.1| hypothetical protein MT0636 [Mycobacterium tuberculosis CDC1551] Length=147 Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 1 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 60 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW Sbjct 6 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 65 Query 61 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDLV 120 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDLV Sbjct 66 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDLV 125 Query 121 RG 122 RG Sbjct 126 RG 127 >gi|120405235|ref|YP_955064.1| hypothetical protein Mvan_4281 [Mycobacterium vanbaalenii PYR-1] gi|119958053|gb|ABM15058.1| hypothetical protein Mvan_4281 [Mycobacterium vanbaalenii PYR-1] Length=327 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 53/118 (45%), Positives = 69/118 (59%), Gaps = 0/118 (0%) Query 1 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 60 +G WQT DT GI LP++W GW E WEDR+EEQL RC AL +P L+ + +E Sbjct 202 IGVWQTVDTAGILDQLPEIWAGWDFEFWEDRYEEQLARCGDALHVPPRKLSVEIREVQEL 261 Query 61 LRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDAVTNGGARPNNEEWARFVAACD 118 +R R+F DSPAG+ L+L +L P L + D V G RP ++W RF ACD Sbjct 262 MRRRVFGSDWDSPAGEALELLAVLRRHAPDLAIRDGDVIAGLIRPTAQQWKRFTTACD 319 >gi|120404207|ref|YP_954036.1| hypothetical protein Mvan_3229 [Mycobacterium vanbaalenii PYR-1] gi|119957025|gb|ABM14030.1| hypothetical protein Mvan_3229 [Mycobacterium vanbaalenii PYR-1] Length=327 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/124 (50%), Positives = 76/124 (62%), Gaps = 1/124 (0%) Query 1 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 60 VG W T G+ LP +W GWR E WEDR+EEQL RC + P LD+ +G A+ Sbjct 200 VGVWVTNPNPGLVWWLPQLWPGWRAEFWEDRYEEQLRRCGPLITAPALDVDSGAAEAKVR 259 Query 61 LRDRIFQRFSDSPAGQILKLSELLADVG-PGLVVSDDAVTNGGARPNNEEWARFVAACDL 119 L++RIFQR DSPAGQ+ +L+ELL G P VS AV + GARP+ EWA F AC Sbjct 260 LKERIFQRREDSPAGQLSRLAELLVAAGLPIPEVSASAVVDVGARPSPAEWACFERACAR 319 Query 120 VRGA 123 VR + Sbjct 320 VRAS 323 >gi|315444406|ref|YP_004077285.1| hypothetical protein Mspyr1_28220 [Mycobacterium sp. Spyr1] gi|315262709|gb|ADT99450.1| hypothetical protein Mspyr1_28220 [Mycobacterium sp. Spyr1] Length=462 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/122 (45%), Positives = 73/122 (60%), Gaps = 1/122 (0%) Query 1 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 60 +G W T G+ + LP +W WR E WEDR+EEQ +C G + P LD +G+ A+ W Sbjct 335 LGLWVTNPVPGLLRWLPRLWPSWRIEFWEDRYEEQFRQCGGLITAPPLDTESGVKEAQSW 394 Query 61 LRDRIFQRFSDSPAGQILKLSELL-ADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDL 119 L++R++Q + DSP G+I L L+ AD P VSD AV + G RP EWA F +AC Sbjct 395 LKNRVYQSYEDSPMGRIDGLVALIDADGLPSPTVSDSAVRDAGIRPTPAEWALFESACAQ 454 Query 120 VR 121 VR Sbjct 455 VR 456 >gi|145224069|ref|YP_001134747.1| hypothetical protein Mflv_3485 [Mycobacterium gilvum PYR-GCK] gi|145216555|gb|ABP45959.1| hypothetical protein Mflv_3485 [Mycobacterium gilvum PYR-GCK] Length=462 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 54/122 (45%), Positives = 72/122 (60%), Gaps = 1/122 (0%) Query 1 VGAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREW 60 +G W T G+ + LP +W WR E WEDR+EEQ +C G + P LD +G+ A+ W Sbjct 335 LGLWVTNPVPGLLRWLPRLWPSWRIEFWEDRYEEQFRQCGGLITAPPLDTESGVKEAQSW 394 Query 61 LRDRIFQRFSDSPAGQILKLSELL-ADVGPGLVVSDDAVTNGGARPNNEEWARFVAACDL 119 L+ R++Q + DSP G+I L L+ AD P VSD AV + G RP EWA F +AC Sbjct 395 LKKRVYQSYEDSPMGRIDGLVALIDADGLPSPTVSDSAVRDAGIRPTPAEWALFESACAQ 454 Query 120 VR 121 VR Sbjct 455 VR 456 >gi|269128990|ref|YP_003302360.1| hypothetical protein Tcur_4805 [Thermomonospora curvata DSM 43183] gi|268313948|gb|ACZ00323.1| hypothetical protein Tcur_4805 [Thermomonospora curvata DSM 43183] Length=342 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/45 (47%), Positives = 26/45 (58%), Gaps = 0/45 (0%) Query 2 GAWQTADTMGIFQALPDVWGGWRTECWEDRFEEQLIRCNGALRLP 46 G W G+ AL ++W GWR WEDR+EEQ RC GA+ P Sbjct 209 GVWLGGTGTGLVPALRELWPGWRVCFWEDRYEEQRRRCAGAVVFP 253 >gi|336325384|ref|YP_004605350.1| histidinol-phosphate aminotransferase [Corynebacterium resistens DSM 45100] gi|336101366|gb|AEI09186.1| histidinol-phosphate aminotransferase [Corynebacterium resistens DSM 45100] Length=382 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 31/121 (26%), Positives = 51/121 (43%), Gaps = 15/121 (12%) Query 4 WQTADTMGIFQALPDVWGGW--RTECWEDRFEEQLIRCNG------ALRLPE-LDLAAGM 54 W + + Q L +GG + + + I C G A+ PE LD A M Sbjct 96 WAANGSNEVLQQLLQAFGGLGRKAMGFTPSYSMHPILCAGTQTEFIAIERPESLDFAIDM 155 Query 55 DSAREWLR----DRIFQRFSDSPAGQILKLSEL--LADVGPGLVVSDDAVTNGGARPNNE 108 +A + D +F ++P G + L+E+ L D+ PG+V+ D+A P+ Sbjct 156 QAATAAIEQHAPDVVFITTPNNPTGNVTPLAEIEKLLDIAPGIVIVDEAYAEFSDEPSTV 215 Query 109 E 109 E Sbjct 216 E 216 >gi|61874330|ref|XP_588793.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like [Bos taurus] gi|297486412|ref|XP_002695630.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like [Bos taurus] gi|296477079|gb|DAA19194.1| adenylate kinase isoenzyme 4, mitochondrial-like [Bos taurus] Length=223 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 26/77 (34%), Positives = 38/77 (50%), Gaps = 6/77 (7%) Query 24 RTECWE-DRFEEQLIRCNGALRLPELDLAAGMDSAREWLRDRIFQRFSDSPAGQILKLSE 82 R E W D F L++ RL +LDL ++ A E L+DR+ +R+ P+G++ L Sbjct 81 RGEHWLLDGFPRTLVQAEALDRLCDLDLVITLNIAFETLKDRLSRRWIHPPSGRVYNL-- 138 Query 83 LLADVGPGLVVSDDAVT 99 D P V D VT Sbjct 139 ---DFNPPHVHGMDDVT 152 >gi|169629754|ref|YP_001703403.1| histidinol-phosphate aminotransferase [Mycobacterium abscessus ATCC 19977] gi|169241721|emb|CAM62749.1| Histidinol-phosphate aminotransferase (HisC) [Mycobacterium abscessus] Length=376 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/62 (33%), Positives = 33/62 (54%), Gaps = 2/62 (3%) Query 47 ELDLAAGMDSAREWLRDRIFQRFSDSPAGQILKLSEL--LADVGPGLVVSDDAVTNGGAR 104 LD+ + + + RE D +F ++P GQ + L L + DV PG+V+ D+A A Sbjct 152 SLDVGSAVAAVRERKPDVVFVTSPNNPTGQSIPLDALRRILDVAPGVVILDEAYGEFSAA 211 Query 105 PN 106 P+ Sbjct 212 PS 213 >gi|15827644|ref|NP_301907.1| histidinol-phosphate aminotransferase [Mycobacterium leprae TN] gi|221230121|ref|YP_002503537.1| histidinol-phosphate aminotransferase [Mycobacterium leprae Br4923] gi|21759223|sp|Q9X7B8.1|HIS8_MYCLE RecName: Full=Histidinol-phosphate aminotransferase; AltName: Full=Imidazole acetol-phosphate transaminase gi|254801962|sp|B8ZRB0.1|HIS8_MYCLB RecName: Full=Histidinol-phosphate aminotransferase; AltName: Full=Imidazole acetol-phosphate transaminase gi|4883453|emb|CAB43167.1| putative histidinol-phosphate aminotransferase [Mycobacterium leprae] gi|13093195|emb|CAC31639.1| histidinol-phosphate aminotransferase [Mycobacterium leprae] gi|219933228|emb|CAR71353.1| histidinol-phosphate aminotransferase [Mycobacterium leprae Br4923] Length=377 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 19/62 (31%), Positives = 36/62 (59%), Gaps = 2/62 (3%) Query 47 ELDLAAGMDSAREWLRDRIFQRFSDSPAGQILKLSEL--LADVGPGLVVSDDAVTNGGAR 104 LD+ A + + + D +F ++P+GQ + L++L L DV PG+++ D+A +R Sbjct 149 SLDVEAAVTAVADRKPDVVFIASPNNPSGQSISLADLRRLLDVVPGILIVDEAYGEFSSR 208 Query 105 PN 106 P+ Sbjct 209 PS 210 >gi|149913743|ref|ZP_01902275.1| hypothetical protein RAZWK3B_17108 [Roseobacter sp. AzwK-3b] gi|149812027|gb|EDM71858.1| hypothetical protein RAZWK3B_17108 [Roseobacter sp. AzwK-3b] Length=104 Score = 34.7 bits (78), Expect = 5.1, Method: Compositional matrix adjust. Identities = 22/59 (38%), Positives = 32/59 (55%), Gaps = 8/59 (13%) Query 39 CNGALRLPELDLAAGMDSAREWLRDRIFQRFSDSPAGQILKLSELLADVGPGLVVSDDA 97 CNG LR P L L G+D R FSD P G++ K+ +++A+ G+V + DA Sbjct 20 CNG-LR-PRLRLVRGVDMGRH------VAGFSDRPRGEVTKVGDMVAEACQGIVQTGDA 70 >gi|344278611|ref|XP_003411087.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like [Loxodonta africana] Length=223 Score = 34.7 bits (78), Expect = 5.1, Method: Compositional matrix adjust. Identities = 24/77 (32%), Positives = 38/77 (50%), Gaps = 6/77 (7%) Query 24 RTECWE-DRFEEQLIRCNGALRLPELDLAAGMDSAREWLRDRIFQRFSDSPAGQILKLSE 82 R++ W D F L++ R+ ELDL ++ E L+DR+ +R+ P+G++ L Sbjct 81 RSQHWLLDGFPRTLVQAEALDRICELDLVITLNIPFETLKDRLSRRWIHPPSGRVYNL-- 138 Query 83 LLADVGPGLVVSDDAVT 99 D P V D VT Sbjct 139 ---DFNPPHVHGIDDVT 152 >gi|313906335|ref|ZP_07839677.1| conserved hypothetical protein [Eubacterium cellulosolvens 6] gi|313468841|gb|EFR64201.1| conserved hypothetical protein [Eubacterium cellulosolvens 6] Length=352 Score = 34.7 bits (78), Expect = 5.1, Method: Compositional matrix adjust. Identities = 28/93 (31%), Positives = 44/93 (48%), Gaps = 10/93 (10%) Query 7 ADTMGIFQALPD-VWGGWRTECWEDRFEEQLIRCNGALRLPELDLAAGMDSAREWLRDRI 65 D ++ A PD +WGG R EC ED E L AL L E ++A + + LR+ Sbjct 90 CDIGSVYGAPPDCIWGGGRIECGEDNPREVL-----AL-LKEYGISARLTFSNSLLRE-- 141 Query 66 FQRFSDSPAGQILKLSELLADVGPGLVVSDDAV 98 + D ++ +L AD+ G++V D + Sbjct 142 -EHLKDERCNELCRLFSSGADMHNGVIVHSDLL 173 >gi|118466104|ref|YP_882369.1| histidinol-phosphate aminotransferase [Mycobacterium avium 104] gi|171472971|sp|A0QHI1.1|HIS8_MYCA1 RecName: Full=Histidinol-phosphate aminotransferase; AltName: Full=Imidazole acetol-phosphate transaminase gi|118167391|gb|ABK68288.1| histidinol-phosphate aminotransferase [Mycobacterium avium 104] Length=398 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 20/62 (33%), Positives = 34/62 (55%), Gaps = 2/62 (3%) Query 47 ELDLAAGMDSAREWLRDRIFQRFSDSPAGQILKLSEL--LADVGPGLVVSDDAVTNGGAR 104 LD+ A + + E D +F ++P+GQ + LS L L D PG+V+ D+A ++ Sbjct 153 SLDVDAAVAAVTERTPDVVFVASPNNPSGQSVSLSGLRRLLDAAPGIVIVDEAYGEFSSQ 212 Query 105 PN 106 P+ Sbjct 213 PS 214 >gi|254775633|ref|ZP_05217149.1| histidinol-phosphate aminotransferase [Mycobacterium avium subsp. avium ATCC 25291] Length=398 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 20/62 (33%), Positives = 34/62 (55%), Gaps = 2/62 (3%) Query 47 ELDLAAGMDSAREWLRDRIFQRFSDSPAGQILKLSEL--LADVGPGLVVSDDAVTNGGAR 104 LD+ A + + E D +F ++P+GQ + LS L L D PG+V+ D+A ++ Sbjct 153 SLDVDAAVAAVTERTPDVVFVASPNNPSGQSVSLSGLRRLLDAAPGIVIVDEAYGEFSSQ 212 Query 105 PN 106 P+ Sbjct 213 PS 214 >gi|41407392|ref|NP_960228.1| histidinol-phosphate aminotransferase [Mycobacterium avium subsp. paratuberculosis K-10] gi|46576364|sp|P61001.1|HIS8_MYCPA RecName: Full=Histidinol-phosphate aminotransferase; AltName: Full=Imidazole acetol-phosphate transaminase gi|41395744|gb|AAS03611.1| HisC [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457880|gb|EGO36873.1| histidinol-phosphate aminotransferase [Mycobacterium avium subsp. paratuberculosis S397] Length=398 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 20/62 (33%), Positives = 34/62 (55%), Gaps = 2/62 (3%) Query 47 ELDLAAGMDSAREWLRDRIFQRFSDSPAGQILKLSEL--LADVGPGLVVSDDAVTNGGAR 104 LD+ A + + E D +F ++P+GQ + LS L L D PG+V+ D+A ++ Sbjct 153 SLDVDAAVAAVTERTPDVVFVASPNNPSGQSVSLSGLRRLLDAAPGIVIVDEAYGEFSSQ 212 Query 105 PN 106 P+ Sbjct 213 PS 214 >gi|258645672|ref|ZP_05733141.1| ATP-dependent protease HslVU, peptidase subunit [Dialister invisus DSM 15470] gi|260403039|gb|EEW96586.1| ATP-dependent protease HslVU, peptidase subunit [Dialister invisus DSM 15470] Length=177 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 6/40 (15%) Query 30 DRFEEQLIRCNGALRLPELDLAAGMDSAREWLRDRIFQRF 69 D+FE +L CNG L + A ++ A+EW RDR+ Q+ Sbjct 63 DKFEGKLSDCNGNL------VRAAVEFAKEWRRDRVLQKL 96 >gi|313892579|ref|ZP_07826166.1| ATP-dependent protease HslVU, peptidase subunit [Dialister microaerophilus UPII 345-E] gi|329121221|ref|ZP_08249848.1| heat shock protein HslV [Dialister micraerophilus DSM 19965] gi|313118976|gb|EFR42181.1| ATP-dependent protease HslVU, peptidase subunit [Dialister microaerophilus UPII 345-E] gi|327470155|gb|EGF15618.1| heat shock protein HslV [Dialister micraerophilus DSM 19965] Length=176 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 6/40 (15%) Query 30 DRFEEQLIRCNGALRLPELDLAAGMDSAREWLRDRIFQRF 69 D+FE +L CNG L L A ++ A++W RDR+ Q+ Sbjct 63 DKFEMKLSDCNGNL------LRAAVEFAKDWRRDRVLQKL 96 Lambda K H 0.320 0.136 0.442 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128801298864 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40