BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0610c

Length=385
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607750|ref|NP_215124.1|  hypothetical protein Rv0610c [Mycob...   760    0.0   
gi|31791793|ref|NP_854286.1|  hypothetical protein Mb0627c [Mycob...   758    0.0   
gi|254363566|ref|ZP_04979612.1|  hypothetical protein TBHG_00605 ...   757    0.0   
gi|306781553|ref|ZP_07419890.1|  hypothetical protein TMBG_03475 ...   756    0.0   
gi|340625633|ref|YP_004744085.1|  hypothetical protein MCAN_06121...   755    0.0   
gi|289442002|ref|ZP_06431746.1|  conserved hypothetical protein [...   600    2e-169
gi|289752651|ref|ZP_06512029.1|  conserved hypothetical protein [...   599    2e-169
gi|289749109|ref|ZP_06508487.1|  hypothetical protein TBDG_03745 ...   598    5e-169
gi|289568547|ref|ZP_06448774.1|  hypothetical protein TBJG_01052 ...   572    5e-161
gi|289756690|ref|ZP_06516068.1|  LOW QUALITY PROTEIN: predicted p...   497    1e-138
gi|167969036|ref|ZP_02551313.1|  hypothetical protein MtubH3_1380...   264    2e-68 
gi|89073170|ref|ZP_01159709.1|  type I site-specific deoxyribonuc...  37.4    4.0   
gi|238578325|ref|XP_002388681.1|  hypothetical protein MPER_12269...  37.0    5.2   


>gi|15607750|ref|NP_215124.1| hypothetical protein Rv0610c [Mycobacterium tuberculosis H37Rv]
 gi|15840012|ref|NP_335049.1| hypothetical protein MT0640 [Mycobacterium tuberculosis CDC1551]
 gi|148660382|ref|YP_001281905.1| hypothetical protein MRA_0619 [Mycobacterium tuberculosis H37Ra]
 36 more sequence titles
 gi|148821812|ref|YP_001286566.1| hypothetical protein TBFG_10621 [Mycobacterium tuberculosis F11]
 gi|253797547|ref|YP_003030548.1| hypothetical protein TBMG_00618 [Mycobacterium tuberculosis KZN 
1435]
 gi|254230946|ref|ZP_04924273.1| hypothetical protein TBCG_00605 [Mycobacterium tuberculosis C]
 gi|254549568|ref|ZP_05140015.1| hypothetical protein Mtube_03745 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289552863|ref|ZP_06442073.1| hypothetical protein TBXG_00613 [Mycobacterium tuberculosis KZN 
605]
 gi|289744324|ref|ZP_06503702.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289760733|ref|ZP_06520111.1| hypothetical protein TBIG_03556 [Mycobacterium tuberculosis GM 
1503]
 gi|294996125|ref|ZP_06801816.1| hypothetical protein Mtub2_16895 [Mycobacterium tuberculosis 
210]
 gi|297633107|ref|ZP_06950887.1| hypothetical protein MtubK4_03235 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297730085|ref|ZP_06959203.1| hypothetical protein MtubKR_03280 [Mycobacterium tuberculosis 
KZN R506]
 gi|298524099|ref|ZP_07011508.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306774717|ref|ZP_07413054.1| hypothetical protein TMAG_02490 [Mycobacterium tuberculosis SUMu001]
 gi|306970821|ref|ZP_07483482.1| hypothetical protein TMJG_02354 [Mycobacterium tuberculosis SUMu010]
 gi|307078544|ref|ZP_07487714.1| hypothetical protein TMKG_03891 [Mycobacterium tuberculosis SUMu011]
 gi|307083108|ref|ZP_07492221.1| hypothetical protein TMLG_03357 [Mycobacterium tuberculosis SUMu012]
 gi|313657412|ref|ZP_07814292.1| hypothetical protein MtubKV_03270 [Mycobacterium tuberculosis 
KZN V2475]
 gi|2222747|emb|CAB09963.1| HYPOTHETICAL PROTEIN Rv0610c [Mycobacterium tuberculosis H37Rv]
 gi|13880156|gb|AAK44863.1| hypothetical protein MT0640 [Mycobacterium tuberculosis CDC1551]
 gi|124600005|gb|EAY59015.1| hypothetical protein TBCG_00605 [Mycobacterium tuberculosis C]
 gi|148504534|gb|ABQ72343.1| hypothetical protein MRA_0619 [Mycobacterium tuberculosis H37Ra]
 gi|148720339|gb|ABR04964.1| hypothetical protein TBFG_10621 [Mycobacterium tuberculosis F11]
 gi|253319050|gb|ACT23653.1| hypothetical protein TBMG_00618 [Mycobacterium tuberculosis KZN 
1435]
 gi|289437495|gb|EFD19988.1| hypothetical protein TBXG_00613 [Mycobacterium tuberculosis KZN 
605]
 gi|289684852|gb|EFD52340.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289708239|gb|EFD72255.1| hypothetical protein TBIG_03556 [Mycobacterium tuberculosis GM 
1503]
 gi|298493893|gb|EFI29187.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308216612|gb|EFO76011.1| hypothetical protein TMAG_02490 [Mycobacterium tuberculosis SUMu001]
 gi|308359608|gb|EFP48459.1| hypothetical protein TMJG_02354 [Mycobacterium tuberculosis SUMu010]
 gi|308363536|gb|EFP52387.1| hypothetical protein TMKG_03891 [Mycobacterium tuberculosis SUMu011]
 gi|308367184|gb|EFP56035.1| hypothetical protein TMLG_03357 [Mycobacterium tuberculosis SUMu012]
 gi|323720965|gb|EGB30030.1| hypothetical protein TMMG_03316 [Mycobacterium tuberculosis CDC1551A]
 gi|326905167|gb|EGE52100.1| hypothetical protein TBPG_03099 [Mycobacterium tuberculosis W-148]
 gi|328457328|gb|AEB02751.1| hypothetical protein TBSG_00622 [Mycobacterium tuberculosis KZN 
4207]
 gi|339293650|gb|AEJ45761.1| hypothetical protein CCDC5079_0571 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297291|gb|AEJ49401.1| hypothetical protein CCDC5180_0564 [Mycobacterium tuberculosis 
CCDC5180]
 gi|344218433|gb|AEM99063.1| hypothetical protein MTCTRI2_0621 [Mycobacterium tuberculosis 
CTRI-2]
Length=385

 Score =  760 bits (1962),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/385 (100%), Positives = 385/385 (100%), Gaps = 0/385 (0%)

Query  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60
            MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS
Sbjct  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60

Query  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120
            DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG
Sbjct  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120

Query  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180
            QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP
Sbjct  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180

Query  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240
            ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL
Sbjct  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240

Query  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300
            DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA
Sbjct  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300

Query  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360
            GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH
Sbjct  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360

Query  361  LWHLEPQAFTARAIRKLRDRAASFR  385
            LWHLEPQAFTARAIRKLRDRAASFR
Sbjct  361  LWHLEPQAFTARAIRKLRDRAASFR  385


>gi|31791793|ref|NP_854286.1| hypothetical protein Mb0627c [Mycobacterium bovis AF2122/97]
 gi|121636529|ref|YP_976752.1| hypothetical protein BCG_0657c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224989001|ref|YP_002643688.1| hypothetical protein JTY_0626 [Mycobacterium bovis BCG str. Tokyo 
172]
 10 more sequence titles
 gi|289446165|ref|ZP_06435909.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289573212|ref|ZP_06453439.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|339630679|ref|YP_004722321.1| hypothetical protein MAF_06180 [Mycobacterium africanum GM041182]
 gi|31617380|emb|CAD93489.1| HYPOTHETICAL PROTEIN Mb0627c [Mycobacterium bovis AF2122/97]
 gi|121492176|emb|CAL70642.1| Hypothetical protein BCG_0657c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224772114|dbj|BAH24920.1| hypothetical protein JTY_0626 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289419123|gb|EFD16324.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289537643|gb|EFD42221.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|339330035|emb|CCC25690.1| hypothetical protein MAF_06180 [Mycobacterium africanum GM041182]
 gi|341600545|emb|CCC63215.1| hypothetical protein BCGM_0622c [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=385

 Score =  758 bits (1957),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/385 (99%), Positives = 385/385 (100%), Gaps = 0/385 (0%)

Query  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60
            MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS
Sbjct  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60

Query  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120
            DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQ+WARTVELEDAVAKPGPG
Sbjct  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQSWARTVELEDAVAKPGPG  120

Query  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180
            QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP
Sbjct  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180

Query  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240
            ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL
Sbjct  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240

Query  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300
            DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA
Sbjct  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300

Query  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360
            GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH
Sbjct  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360

Query  361  LWHLEPQAFTARAIRKLRDRAASFR  385
            LWHLEPQAFTARAIRKLRDRAASFR
Sbjct  361  LWHLEPQAFTARAIRKLRDRAASFR  385


>gi|254363566|ref|ZP_04979612.1| hypothetical protein TBHG_00605 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134149080|gb|EBA41125.1| hypothetical protein TBHG_00605 [Mycobacterium tuberculosis str. 
Haarlem]
Length=385

 Score =  757 bits (1954),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/385 (99%), Positives = 384/385 (99%), Gaps = 0/385 (0%)

Query  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60
            MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS
Sbjct  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60

Query  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120
            DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG
Sbjct  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120

Query  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180
            QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP
Sbjct  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180

Query  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240
            ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL
Sbjct  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240

Query  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300
            DQHGARQEKRELSNRATPVGEVTVARAWWNYD REIAFTRVAPASDTEGLGSVPSRILCA
Sbjct  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDCREIAFTRVAPASDTEGLGSVPSRILCA  300

Query  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360
            GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH
Sbjct  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360

Query  361  LWHLEPQAFTARAIRKLRDRAASFR  385
            LWHLEPQAFTARAIRKLRDRAASFR
Sbjct  361  LWHLEPQAFTARAIRKLRDRAASFR  385


>gi|306781553|ref|ZP_07419890.1| hypothetical protein TMBG_03475 [Mycobacterium tuberculosis SUMu002]
 gi|306783255|ref|ZP_07421577.1| hypothetical protein TMCG_03816 [Mycobacterium tuberculosis SUMu003]
 gi|306787626|ref|ZP_07425948.1| hypothetical protein TMDG_02332 [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 gi|306794391|ref|ZP_07432693.1| hypothetical protein TMEG_01981 [Mycobacterium tuberculosis SUMu005]
 gi|306796361|ref|ZP_07434663.1| hypothetical protein TMFG_03276 [Mycobacterium tuberculosis SUMu006]
 gi|306802221|ref|ZP_07438889.1| hypothetical protein TMHG_03634 [Mycobacterium tuberculosis SUMu008]
 gi|306806428|ref|ZP_07443096.1| hypothetical protein TMGG_03626 [Mycobacterium tuberculosis SUMu007]
 gi|306966628|ref|ZP_07479289.1| hypothetical protein TMIG_01512 [Mycobacterium tuberculosis SUMu009]
 gi|308325652|gb|EFP14503.1| hypothetical protein TMBG_03475 [Mycobacterium tuberculosis SUMu002]
 gi|308331918|gb|EFP20769.1| hypothetical protein TMCG_03816 [Mycobacterium tuberculosis SUMu003]
 gi|308335705|gb|EFP24556.1| hypothetical protein TMDG_02332 [Mycobacterium tuberculosis SUMu004]
 gi|308337284|gb|EFP26135.1| hypothetical protein TMEG_01981 [Mycobacterium tuberculosis SUMu005]
 gi|308343209|gb|EFP32060.1| hypothetical protein TMFG_03276 [Mycobacterium tuberculosis SUMu006]
 gi|308347078|gb|EFP35929.1| hypothetical protein TMGG_03626 [Mycobacterium tuberculosis SUMu007]
 gi|308351021|gb|EFP39872.1| hypothetical protein TMHG_03634 [Mycobacterium tuberculosis SUMu008]
 gi|308355653|gb|EFP44504.1| hypothetical protein TMIG_01512 [Mycobacterium tuberculosis SUMu009]
Length=385

 Score =  756 bits (1952),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/385 (99%), Positives = 384/385 (99%), Gaps = 0/385 (0%)

Query  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60
            MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS
Sbjct  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60

Query  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120
            DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG
Sbjct  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120

Query  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180
            QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP
Sbjct  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180

Query  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240
            ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL
Sbjct  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240

Query  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300
            DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVA ASDTEGLGSVPSRILCA
Sbjct  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVARASDTEGLGSVPSRILCA  300

Query  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360
            GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH
Sbjct  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360

Query  361  LWHLEPQAFTARAIRKLRDRAASFR  385
            LWHLEPQAFTARAIRKLRDRAASFR
Sbjct  361  LWHLEPQAFTARAIRKLRDRAASFR  385


>gi|340625633|ref|YP_004744085.1| hypothetical protein MCAN_06121 [Mycobacterium canettii CIPT 
140010059]
 gi|340003823|emb|CCC42952.1| hypothetical protein MCAN_06121 [Mycobacterium canettii CIPT 
140010059]
Length=385

 Score =  755 bits (1950),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 383/385 (99%), Positives = 384/385 (99%), Gaps = 0/385 (0%)

Query  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60
            MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS
Sbjct  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60

Query  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120
            DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQ+WARTVELEDAVAKPGPG
Sbjct  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQSWARTVELEDAVAKPGPG  120

Query  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180
            QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP
Sbjct  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180

Query  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240
            ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL
Sbjct  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240

Query  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300
            DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGS PSRILCA
Sbjct  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSGPSRILCA  300

Query  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360
            GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH
Sbjct  301  GKLRQSIQSKLAGLPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAH  360

Query  361  LWHLEPQAFTARAIRKLRDRAASFR  385
            LWHLEPQAFTARAIRKLRDRAASFR
Sbjct  361  LWHLEPQAFTARAIRKLRDRAASFR  385


>gi|289442002|ref|ZP_06431746.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289414921|gb|EFD12161.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=304

 Score =  600 bits (1546),  Expect = 2e-169, Method: Compositional matrix adjust.
 Identities = 303/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%)

Query  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60
            MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS
Sbjct  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60

Query  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120
            DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQ+WARTVELEDAVAKPGPG
Sbjct  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQSWARTVELEDAVAKPGPG  120

Query  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180
            QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP
Sbjct  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180

Query  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240
            ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL
Sbjct  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240

Query  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300
            DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA
Sbjct  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300

Query  301  GKLR  304
            GKLR
Sbjct  301  GKLR  304


>gi|289752651|ref|ZP_06512029.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289693238|gb|EFD60667.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=304

 Score =  599 bits (1545),  Expect = 2e-169, Method: Compositional matrix adjust.
 Identities = 302/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%)

Query  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60
            MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS
Sbjct  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60

Query  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120
            DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQ+WARTVELEDA+AKPGPG
Sbjct  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQSWARTVELEDAIAKPGPG  120

Query  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180
            QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP
Sbjct  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180

Query  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240
            ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL
Sbjct  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240

Query  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300
            DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA
Sbjct  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300

Query  301  GKLR  304
            GKLR
Sbjct  301  GKLR  304


>gi|289749109|ref|ZP_06508487.1| hypothetical protein TBDG_03745 [Mycobacterium tuberculosis T92]
 gi|289689696|gb|EFD57125.1| hypothetical protein TBDG_03745 [Mycobacterium tuberculosis T92]
Length=304

 Score =  598 bits (1542),  Expect = 5e-169, Method: Compositional matrix adjust.
 Identities = 302/304 (99%), Positives = 303/304 (99%), Gaps = 0/304 (0%)

Query  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60
            MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS
Sbjct  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60

Query  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120
            DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQ+WARTVELEDAVAKPGPG
Sbjct  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQSWARTVELEDAVAKPGPG  120

Query  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180
            QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP
Sbjct  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180

Query  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240
            ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL
Sbjct  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240

Query  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCA  300
            DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAP SDTEGLGSVPSRILCA
Sbjct  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPTSDTEGLGSVPSRILCA  300

Query  301  GKLR  304
            GKLR
Sbjct  301  GKLR  304


>gi|289568547|ref|ZP_06448774.1| hypothetical protein TBJG_01052 [Mycobacterium tuberculosis T17]
 gi|289542301|gb|EFD45949.1| hypothetical protein TBJG_01052 [Mycobacterium tuberculosis T17]
Length=317

 Score =  572 bits (1473),  Expect = 5e-161, Method: Compositional matrix adjust.
 Identities = 293/308 (96%), Positives = 295/308 (96%), Gaps = 2/308 (0%)

Query  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60
            MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS
Sbjct  1    MDDELRGLLARYARGELSADDARRAILRYPKWRVAEIDGELETVALDDGTPMLIAESSAS  60

Query  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQNWARTVELEDAVAKPGPG  120
            DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQ+WARTVELEDAVAKPGPG
Sbjct  61   DGREYSGLELVRDIAPLVGGLSFDPDEPWGSAFRPGALPELQSWARTVELEDAVAKPGPG  120

Query  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180
            QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP
Sbjct  121  QRDLLYEGPWWVAVSPGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGP  180

Query  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240
            ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL
Sbjct  181  ALWGDLAKRSDFDGVRLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWL  240

Query  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTE--GLGSVPSRIL  298
            DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTE  GLG  P    
Sbjct  241  DQHGARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTERSGLGFRPGSSA  300

Query  299  CAGKLRQS  306
             A   + S
Sbjct  301  PANSAKAS  308


>gi|289756690|ref|ZP_06516068.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
T85]
 gi|289712254|gb|EFD76266.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
T85]
Length=337

 Score =  497 bits (1279),  Expect = 1e-138, Method: Compositional matrix adjust.
 Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)

Query  136  PGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGPALWGDLAKRSDFDGV  195
            PGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGPALWGDLAKRSDFDGV
Sbjct  88   PGTGRPAVHRADGLDVITIMTAPDAAATFRRTERHRGLDVVRLGPALWGDLAKRSDFDGV  147

Query  196  RLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWLDQHGARQEKRELSNR  255
            RLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWLDQHGARQEKRELSNR
Sbjct  148  RLNPLRPLAQLWPPHVPAMLVAGCDPRPNAEPLPARTVAEIHLWLDQHGARQEKRELSNR  207

Query  256  ATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCAGKLRQSIQSKLAGLP  315
            ATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCAGKLRQSIQSKLAGLP
Sbjct  208  ATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCAGKLRQSIQSKLAGLP  267

Query  316  RLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAHLWHLEPQAFTARAIR  375
            RLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAHLWHLEPQAFTARAIR
Sbjct  268  RLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAHLWHLEPQAFTARAIR  327

Query  376  KLRDRAASFR  385
            KLRDRAASFR
Sbjct  328  KLRDRAASFR  337


>gi|167969036|ref|ZP_02551313.1| hypothetical protein MtubH3_13807 [Mycobacterium tuberculosis 
H37Ra]
Length=143

 Score =  264 bits (674),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 132/132 (100%), Positives = 132/132 (100%), Gaps = 0/132 (0%)

Query  254  NRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCAGKLRQSIQSKLAG  313
            NRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCAGKLRQSIQSKLAG
Sbjct  12   NRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCAGKLRQSIQSKLAG  71

Query  314  LPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAHLWHLEPQAFTARA  373
            LPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAHLWHLEPQAFTARA
Sbjct  72   LPRLTWRADAWHRQRAALAVGWALELEKLVCGERVPFAALRTPEGAHLWHLEPQAFTARA  131

Query  374  IRKLRDRAASFR  385
            IRKLRDRAASFR
Sbjct  132  IRKLRDRAASFR  143


>gi|89073170|ref|ZP_01159709.1| type I site-specific deoxyribonuclease [Photobacterium sp. SKA34]
 gi|89051123|gb|EAR56580.1| type I site-specific deoxyribonuclease [Photobacterium sp. SKA34]
Length=529

 Score = 37.4 bits (85),  Expect = 4.0, Method: Compositional matrix adjust.
 Identities = 27/91 (30%), Positives = 44/91 (49%), Gaps = 4/91 (4%)

Query  9    LARYARGELSADDARRAIL--RYPKWRVAEIDGELETVALDDGTPMLIAESSASDGREYS  66
            +A + RG++  DD R  IL   + K+   ++    + + LDDG      +  + DG+EY 
Sbjct  16   IATHLRGQMQGDDFRNYILGLLFYKYLSDKLIRYADELLLDDGIRFAQIDEKSEDGQEY-  74

Query  67   GLELVRDIAPLVGGLSFDPDEPWGSAFRPGA  97
             LE +++ A  V G  F P E +      GA
Sbjct  75   -LEAIKEEARNVLGYFFKPSELFHVLAEAGA  104


>gi|238578325|ref|XP_002388681.1| hypothetical protein MPER_12269 [Moniliophthora perniciosa FA553]
 gi|215450179|gb|EEB89611.1| hypothetical protein MPER_12269 [Moniliophthora perniciosa FA553]
Length=275

 Score = 37.0 bits (84),  Expect = 5.2, Method: Compositional matrix adjust.
 Identities = 29/97 (30%), Positives = 42/97 (44%), Gaps = 7/97 (7%)

Query  245  ARQEKRELSNRATPVGEVTVARAWWNYDRREIAFTRVAPASDTEGLGSVPSRILCAGKLR  304
            A+  +  L N  TP     V +A WN   R +    + P +   G+   P  +LCAGKLR
Sbjct  61   AQANQYALDNGKTPF---CVYQARWNIIERSVE-KEILPMARAFGMAIAPYAVLCAGKLR  116

Query  305  QSIQS---KLAGLPRLTWRADAWHRQRAALAVGWALE  338
               +    K +G    T  +D W R    + +  ALE
Sbjct  117  TDAEEQRRKESGEKGRTVYSDQWERTDTEVKMSRALE  153



Lambda     K      H
   0.320    0.136    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 749688914200




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40