BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0611c
Length=127
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607751|ref|NP_215125.1| hypothetical protein Rv0611c [Mycob... 259 9e-68
gi|339630680|ref|YP_004722322.1| hypothetical protein MAF_06190 ... 257 3e-67
gi|167969037|ref|ZP_02551314.1| hypothetical protein MtubH3_1381... 145 1e-33
gi|240169373|ref|ZP_04748032.1| hypothetical protein MkanA1_0867... 129 1e-28
gi|300114981|ref|YP_003761556.1| hypothetical protein Nwat_2418 ... 75.5 2e-12
gi|291615460|ref|YP_003522568.1| hypothetical protein Nhal_3968 ... 75.5 2e-12
gi|298527649|ref|ZP_07015053.1| conserved hypothetical protein [... 70.5 8e-11
gi|309792091|ref|ZP_07686565.1| hypothetical protein OSCT_2516 [... 68.2 4e-10
gi|91201928|emb|CAJ74988.1| hypothetical protein kuste4226 [Cand... 68.2 4e-10
gi|300868370|ref|ZP_07112996.1| conserved hypothetical protein [... 66.6 1e-09
gi|328952993|ref|YP_004370327.1| hypothetical protein Desac_1289... 65.1 4e-09
gi|198284498|ref|YP_002220819.1| hypothetical protein Lferr_2416... 65.1 4e-09
gi|268315983|ref|YP_003289702.1| hypothetical protein Rmar_0410 ... 64.7 5e-09
gi|83815023|ref|YP_444782.1| hypothetical protein SRU_0644 [Sali... 62.0 3e-08
gi|218295120|ref|ZP_03495956.1| conserved hypothetical protein [... 56.2 1e-06
gi|320449892|ref|YP_004201988.1| hypothetical protein TSC_c08130... 55.8 2e-06
gi|209524607|ref|ZP_03273155.1| conserved hypothetical protein [... 55.5 3e-06
gi|284040469|ref|YP_003390399.1| hypothetical protein Slin_5635 ... 53.5 1e-05
gi|221064675|ref|ZP_03540780.1| conserved hypothetical protein [... 51.6 4e-05
gi|307154580|ref|YP_003889964.1| hypothetical protein Cyan7822_4... 48.5 3e-04
gi|87300632|ref|ZP_01083474.1| hypothetical protein WH5701_04270... 48.5 4e-04
gi|322387623|ref|ZP_08061232.1| hypothetical protein HMPREF9423_... 47.8 6e-04
gi|41409911|ref|NP_962747.1| hypothetical protein MAP3813 [Mycob... 47.4 7e-04
gi|218440834|ref|YP_002379163.1| hypothetical protein PCC7424_39... 46.2 0.001
gi|300868372|ref|ZP_07112998.1| conserved hypothetical protein [... 46.2 0.002
gi|172036936|ref|YP_001803437.1| hypothetical protein cce_2021 [... 45.4 0.003
gi|209527352|ref|ZP_03275860.1| conserved hypothetical protein [... 45.1 0.003
gi|119494545|ref|ZP_01624691.1| hypothetical protein L8106_09056... 45.1 0.003
gi|219883415|ref|YP_002478575.1| hypothetical protein Cyan7425_5... 44.7 0.004
gi|219883422|ref|YP_002478582.1| hypothetical protein Cyan7425_5... 44.3 0.006
gi|254432840|ref|ZP_05046543.1| hypothetical protein CPCC7001_27... 44.3 0.007
gi|46255124|ref|YP_006036.1| hypothetical protein TT_P0053 [Ther... 43.9 0.007
gi|148656078|ref|YP_001276283.1| hypothetical protein RoseRS_194... 42.7 0.016
gi|261821050|ref|YP_003259156.1| hypothetical protein Pecwa_1763... 42.7 0.018
gi|166367522|ref|YP_001659795.1| hypothetical protein MAE_47810 ... 42.7 0.018
gi|254423555|ref|ZP_05037273.1| hypothetical protein S7335_3711 ... 42.7 0.019
gi|118466051|ref|YP_883957.1| hypothetical protein MAV_4833 [Myc... 42.4 0.022
gi|67923452|ref|ZP_00516929.1| hypothetical protein CwatDRAFT_29... 42.0 0.027
gi|309792600|ref|ZP_07687062.1| hypothetical protein OSCT_3013 [... 42.0 0.031
gi|186686138|ref|YP_001869334.1| hypothetical protein Npun_F6102... 42.0 0.031
gi|159027950|emb|CAO87113.1| unnamed protein product [Microcysti... 41.6 0.039
gi|284040701|ref|YP_003390631.1| hypothetical protein Slin_5868 ... 41.2 0.057
gi|336460224|gb|EGO39127.1| hypothetical protein MAPs_42520 [Myc... 40.8 0.065
gi|257062096|ref|YP_003139984.1| hypothetical protein Cyan8802_4... 40.8 0.071
gi|218439132|ref|YP_002377461.1| hypothetical protein PCC7424_21... 40.4 0.077
gi|186896942|ref|YP_001874054.1| hypothetical protein YPTS_3644 ... 40.0 0.10
gi|262044243|ref|ZP_06017310.1| conserved hypothetical protein [... 40.0 0.12
gi|238895122|ref|YP_002919857.1| hypothetical protein KP1_3162 [... 40.0 0.12
gi|254422715|ref|ZP_05036433.1| hypothetical protein S7335_2867 ... 39.3 0.21
gi|269121885|ref|YP_003310062.1| hypothetical protein Sterm_3290... 38.9 0.24
>gi|15607751|ref|NP_215125.1| hypothetical protein Rv0611c [Mycobacterium tuberculosis H37Rv]
gi|15840013|ref|NP_335050.1| hypothetical protein MT0641 [Mycobacterium tuberculosis CDC1551]
gi|31791794|ref|NP_854287.1| hypothetical protein Mb0628c [Mycobacterium bovis AF2122/97]
45 more sequence titles
Length=127
Score = 259 bits (662), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 126/127 (99%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 1 LPDRPQHPTASRQSSMVSWNHGAAGWLHCVQCGSATNPTACLDWLPPIHARSGPMYAEHD 60
+PDRPQHPTASRQSSMVSWNHGAAGWLHCVQCGSATNPTACLDWLPPIHARSGPMYAEHD
Sbjct 1 MPDRPQHPTASRQSSMVSWNHGAAGWLHCVQCGSATNPTACLDWLPPIHARSGPMYAEHD 60
Query 61 VVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRRRREI 120
VVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRRRREI
Sbjct 61 VVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRRRREI 120
Query 121 PHVREVA 127
PHVREVA
Sbjct 121 PHVREVA 127
>gi|339630680|ref|YP_004722322.1| hypothetical protein MAF_06190 [Mycobacterium africanum GM041182]
gi|339330036|emb|CCC25691.1| hypothetical protein MAF_06190 [Mycobacterium africanum GM041182]
Length=127
Score = 257 bits (657), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/127 (99%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 1 LPDRPQHPTASRQSSMVSWNHGAAGWLHCVQCGSATNPTACLDWLPPIHARSGPMYAEHD 60
+PDRPQHPTASRQSSMVSWNHGAAGWLHCVQCGSATNPTACLDWLPPIHARSGPMYAEHD
Sbjct 1 MPDRPQHPTASRQSSMVSWNHGAAGWLHCVQCGSATNPTACLDWLPPIHARSGPMYAEHD 60
Query 61 VVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRRRREI 120
VVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRRRR+I
Sbjct 61 VVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRRRRDI 120
Query 121 PHVREVA 127
PHVREVA
Sbjct 121 PHVREVA 127
>gi|167969037|ref|ZP_02551314.1| hypothetical protein MtubH3_13812 [Mycobacterium tuberculosis
H37Ra]
gi|254230947|ref|ZP_04924274.1| hypothetical protein TBCG_00606 [Mycobacterium tuberculosis C]
gi|254549569|ref|ZP_05140016.1| hypothetical protein Mtube_03750 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
28 more sequence titles
Length=73
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRP 114
MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRP
Sbjct 1 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRP 60
Query 115 RRRREIPHVREVA 127
RRRREIPHVREVA
Sbjct 61 RRRREIPHVREVA 73
>gi|240169373|ref|ZP_04748032.1| hypothetical protein MkanA1_08673 [Mycobacterium kansasii ATCC
12478]
Length=73
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/73 (88%), Positives = 70/73 (96%), Gaps = 0/73 (0%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRP 114
MYAEHDVVVLTRD+P+KSL+AGDVGAVVGRYAAGGYEV+FTAA+G T+AVVTLAGDDIRP
Sbjct 1 MYAEHDVVVLTRDLPEKSLLAGDVGAVVGRYAAGGYEVEFTAADGSTIAVVTLAGDDIRP 60
Query 115 RRRREIPHVREVA 127
RR REI HVREVA
Sbjct 61 RRPREILHVREVA 73
>gi|300114981|ref|YP_003761556.1| hypothetical protein Nwat_2418 [Nitrosococcus watsonii C-113]
gi|299540918|gb|ADJ29235.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length=74
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 52/74 (71%), Gaps = 1/74 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M E ++VVLT+DVP+ L AGD+G VV + AG GYEV+F +G T+AV+TL D +R
Sbjct 1 MIRELELVVLTQDVPEHGLKAGDLGTVVLIHEAGTGYEVEFATLSGETLAVLTLPADSLR 60
Query 114 PRRRREIPHVREVA 127
P REI HVREVA
Sbjct 61 PAATREIAHVREVA 74
>gi|291615460|ref|YP_003522568.1| hypothetical protein Nhal_3968 [Nitrosococcus halophilus Nc4]
gi|291582522|gb|ADE16978.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
Length=74
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 52/74 (71%), Gaps = 1/74 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M E ++VVLT+DVP+ L AGD+G VV + AG GYEV+F +G T+AV+TL D +R
Sbjct 1 MIRELELVVLTQDVPEHGLKAGDLGTVVLIHEAGAGYEVEFATLSGETLAVLTLPADSLR 60
Query 114 PRRRREIPHVREVA 127
P REI HVREVA
Sbjct 61 PAATREIAHVREVA 74
>gi|298527649|ref|ZP_07015053.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511301|gb|EFI35203.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
Length=76
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/74 (53%), Positives = 48/74 (65%), Gaps = 1/74 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M EH+ VLT D+P L+AGDVG VV Y G YEV+F A +G TVAV TL IR
Sbjct 1 MIKEHENAVLTVDLPSTGLMAGDVGVVVHVYELGKAYEVEFIALDGNTVAVETLDAGKIR 60
Query 114 PRRRREIPHVREVA 127
P + RE+ HVR++A
Sbjct 61 PVQEREMLHVRDMA 74
>gi|309792091|ref|ZP_07686565.1| hypothetical protein OSCT_2516 [Oscillochloris trichoides DG6]
gi|308225898|gb|EFO79652.1| hypothetical protein OSCT_2516 [Oscillochloris trichoides DG6]
Length=74
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/71 (55%), Positives = 46/71 (65%), Gaps = 1/71 (1%)
Query 58 EHDVVVLTRDVPDKSLIAGDVGAVVGRY-AAGGYEVDFTAANGCTVAVVTLAGDDIRPRR 116
E D+VVLT VPD L GDVG VV Y A YEV+F A G T+AV+TLA +RP
Sbjct 3 ELDLVVLTHPVPDYGLQQGDVGTVVHVYHNAQAYEVEFVTAEGVTLAVLTLAQKAVRPLA 62
Query 117 RREIPHVREVA 127
REI HVR++A
Sbjct 63 AREILHVRDLA 73
>gi|91201928|emb|CAJ74988.1| hypothetical protein kuste4226 [Candidatus Kuenenia stuttgartiensis]
Length=76
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (48%), Positives = 47/74 (64%), Gaps = 1/74 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M EHD +VL +D+P+ L AGDVG V+ + G +EV+F +G TVAV TL IR
Sbjct 1 MIKEHDRIVLLKDLPEDGLQAGDVGTVIHIHRQGEAFEVEFMTLDGGTVAVTTLLSSQIR 60
Query 114 PRRRREIPHVREVA 127
+R+I HVRE+A
Sbjct 61 AVSKRDITHVRELA 74
>gi|300868370|ref|ZP_07112996.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300333663|emb|CBN58184.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length=74
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (48%), Positives = 46/74 (63%), Gaps = 1/74 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M E D VVLT D+P+++L GD+G VV + G GYEV+F G TVA+V+L +R
Sbjct 1 MIQELDSVVLTTDIPEQNLSQGDIGTVVLVHQGGVGYEVEFVTLTGKTVAIVSLFSSQVR 60
Query 114 PRRRREIPHVREVA 127
R REI H R +A
Sbjct 61 LIRDREIAHARMLA 74
>gi|328952993|ref|YP_004370327.1| hypothetical protein Desac_1289 [Desulfobacca acetoxidans DSM
11109]
gi|328453317|gb|AEB09146.1| hypothetical protein Desac_1289 [Desulfobacca acetoxidans DSM
11109]
Length=78
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/71 (51%), Positives = 45/71 (64%), Gaps = 1/71 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGG-YEVDFTAANGCTVAVVTLAGDDIR 113
M+ E D+ VL RDVP+ L +GD+GA+V Y G YEV+F A G TVA++TL DIR
Sbjct 1 MFKELDIAVLRRDVPEHDLKSGDIGAIVHCYDVGEMYEVEFVDAGGKTVALLTLGAADIR 60
Query 114 PRRRREIPHVR 124
EI HVR
Sbjct 61 AMDGSEILHVR 71
>gi|198284498|ref|YP_002220819.1| hypothetical protein Lferr_2416 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667277|ref|YP_002427162.1| hypothetical protein AFE_2792 [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198249019|gb|ACH84612.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519490|gb|ACK80076.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|339834362|gb|EGQ62132.1| hypothetical protein GGI1_11053 [Acidithiobacillus sp. GGI-221]
Length=73
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/71 (46%), Positives = 44/71 (62%), Gaps = 1/71 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M E D V+L +D PD+ L+ D+GAVV Y G YEV+F G T+ V+TL D++R
Sbjct 1 MIQELDTVILVQDYPDQGLVKSDMGAVVLLYEGGKAYEVEFVTLTGDTLRVLTLTADEVR 60
Query 114 PRRRREIPHVR 124
P R++ HVR
Sbjct 61 PISARDVLHVR 71
>gi|268315983|ref|YP_003289702.1| hypothetical protein Rmar_0410 [Rhodothermus marinus DSM 4252]
gi|262333517|gb|ACY47314.1| conserved hypothetical protein [Rhodothermus marinus DSM 4252]
Length=64
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/63 (58%), Positives = 41/63 (66%), Gaps = 1/63 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M E D VVL RD+P+ L AGDVG VV Y G GYEV+F G TVAV+TL +DIR
Sbjct 1 MMCELDRVVLVRDLPEHGLEAGDVGTVVHVYGEGEGYEVEFVGGEGETVAVITLGPEDIR 60
Query 114 PRR 116
P R
Sbjct 61 PMR 63
>gi|83815023|ref|YP_444782.1| hypothetical protein SRU_0644 [Salinibacter ruber DSM 13855]
gi|83756417|gb|ABC44530.1| conserved hypothetical protein [Salinibacter ruber DSM 13855]
Length=74
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 44/73 (61%), Gaps = 1/73 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M EHD VVLT PD L GDVG VV Y+ G +EV+F G TVA++ + D++R
Sbjct 1 MIEEHDRVVLTTKEPDAGLEPGDVGTVVHVYSEGEAFEVEFVTLTGDTVAMLAIDRDEVR 60
Query 114 PRRRREIPHVREV 126
P + RE+ H R V
Sbjct 61 PVQSRELTHARSV 73
>gi|218295120|ref|ZP_03495956.1| conserved hypothetical protein [Thermus aquaticus Y51MC23]
gi|218244323|gb|EED10848.1| conserved hypothetical protein [Thermus aquaticus Y51MC23]
Length=72
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/62 (49%), Positives = 39/62 (63%), Gaps = 0/62 (0%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRP 114
M EHD+VVL RD + L AGDVG VV Y GGY V+F G T+A++ LA +++ P
Sbjct 1 MIREHDLVVLRRDKREWGLEAGDVGTVVLVYPKGGYMVEFVDHEGNTLALLDLAEEEVEP 60
Query 115 RR 116
R
Sbjct 61 LR 62
>gi|320449892|ref|YP_004201988.1| hypothetical protein TSC_c08130 [Thermus scotoductus SA-01]
gi|320150061|gb|ADW21439.1| conserved hypothetical protein [Thermus scotoductus SA-01]
Length=73
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (49%), Positives = 38/62 (62%), Gaps = 0/62 (0%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRP 114
M EHD+VVL RD + L AGDVG VV Y GGY V+F G T+A++ L D++ P
Sbjct 1 MIREHDLVVLKRDHREVGLEAGDVGTVVLVYPKGGYMVEFVDHEGNTLALLDLKEDEVLP 60
Query 115 RR 116
R
Sbjct 61 LR 62
>gi|209524607|ref|ZP_03273155.1| conserved hypothetical protein [Arthrospira maxima CS-328]
gi|209495065|gb|EDZ95372.1| conserved hypothetical protein [Arthrospira maxima CS-328]
Length=76
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/74 (44%), Positives = 44/74 (60%), Gaps = 1/74 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M +E D VVLT D+P+ L +GD+G VV + G GYEV+F G T+A+V+L +R
Sbjct 1 MISELDRVVLTADLPEYDLKSGDMGTVVLVHQEGLGYEVEFMTIAGETIAIVSLLSSQVR 60
Query 114 PRRRREIPHVREVA 127
REI R +A
Sbjct 61 GIGDREIAQARVLA 74
>gi|284040469|ref|YP_003390399.1| hypothetical protein Slin_5635 [Spirosoma linguale DSM 74]
gi|283819762|gb|ADB41600.1| conserved hypothetical protein [Spirosoma linguale DSM 74]
Length=76
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (44%), Positives = 40/71 (57%), Gaps = 1/71 (1%)
Query 58 EHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIRPRR 116
E D+VVL + + L GDVG ++ Y G GYEV+F G VAV TL IRP R
Sbjct 3 EFDLVVLQENTANGRLRIGDVGTILTVYNEGKGYEVEFVTLTGEAVAVETLLAHQIRPVR 62
Query 117 RREIPHVREVA 127
E+ VR++A
Sbjct 63 SSEVLAVRDMA 73
>gi|221064675|ref|ZP_03540780.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
gi|220709698|gb|EED65066.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
Length=76
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/72 (42%), Positives = 40/72 (56%), Gaps = 1/72 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M EH VVL + VP+ L GDVG VV +A G YEV+F +G T+ + T+ D+R
Sbjct 1 MLKEHSQVVLKKPVPNLGLEPGDVGVVVHIHAQGAAYEVEFLTLDGHTIGLETIDAVDLR 60
Query 114 PRRRREIPHVRE 125
P + H RE
Sbjct 61 PASGSAVVHERE 72
>gi|307154580|ref|YP_003889964.1| hypothetical protein Cyan7822_4791 [Cyanothece sp. PCC 7822]
gi|306984808|gb|ADN16689.1| conserved hypothetical protein [Cyanothece sp. PCC 7822]
Length=103
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/54 (41%), Positives = 34/54 (63%), Gaps = 0/54 (0%)
Query 59 HDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDI 112
DV+ L RD+PD L AG GA+V Y G +EV+F+ ++G T+A+ L+ +
Sbjct 7 FDVIELLRDLPDYQLKAGQQGAIVECYENGKFEVEFSDSDGETLALCPLSSEQF 60
>gi|87300632|ref|ZP_01083474.1| hypothetical protein WH5701_04270 [Synechococcus sp. WH 5701]
gi|87284503|gb|EAQ76455.1| hypothetical protein WH5701_04270 [Synechococcus sp. WH 5701]
Length=77
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (49%), Positives = 32/47 (69%), Gaps = 0/47 (0%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCT 101
M+A H V LT+D+P+ L +GD+GAVV + YEV+F AA+G T
Sbjct 1 MFALHQTVALTQDIPETGLQSGDLGAVVAIHDPETYEVEFVAASGRT 47
>gi|322387623|ref|ZP_08061232.1| hypothetical protein HMPREF9423_0630 [Streptococcus infantis
ATCC 700779]
gi|321141490|gb|EFX36986.1| hypothetical protein HMPREF9423_0630 [Streptococcus infantis
ATCC 700779]
Length=67
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (38%), Positives = 38/61 (63%), Gaps = 2/61 (3%)
Query 56 YAEHDVVVLTRDVPDKSLIAGDVGAVVGRYA--AGGYEVDFTAANGCTVAVVTLAGDDIR 113
Y+ +VV L +D+PD +L GD+GA+V Y+ YEV+F G T++++TL + +
Sbjct 3 YSLLEVVKLQQDLPDFNLQQGDIGAIVEVYSNPYEAYEVEFCDTKGKTISLLTLKPEQLM 62
Query 114 P 114
P
Sbjct 63 P 63
>gi|41409911|ref|NP_962747.1| hypothetical protein MAP3813 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398744|gb|AAS06363.1| hypothetical protein MAP_3813 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=101
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (41%), Positives = 37/62 (60%), Gaps = 7/62 (11%)
Query 58 EHDVVVLTRDVPDKSLIAGDVGAVVGRYAA-------GGYEVDFTAANGCTVAVVTLAGD 110
E+DV+ L R +P+ +L AG G +V Y YEV+F+ +G T A+VTL+GD
Sbjct 30 EYDVIRLLRPLPEHNLPAGSRGTIVMDYTKDSDSTLPSAYEVEFSDVDGVTQALVTLSGD 89
Query 111 DI 112
D+
Sbjct 90 DL 91
>gi|218440834|ref|YP_002379163.1| hypothetical protein PCC7424_3918 [Cyanothece sp. PCC 7424]
gi|218173562|gb|ACK72295.1| conserved hypothetical protein [Cyanothece sp. PCC 7424]
Length=64
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (36%), Positives = 39/64 (61%), Gaps = 1/64 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDIR 113
M E D+V+LT D+ ++ L G GA++ YA G +EV+F +G T+A++TL D++
Sbjct 1 MIKELDIVMLTHDIREQGLKKGSQGAIIHCYADGQAFEVEFVNDSGKTLALLTLEKADLQ 60
Query 114 PRRR 117
+
Sbjct 61 LEQE 64
>gi|300868372|ref|ZP_07112998.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300333665|emb|CBN58186.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length=103
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (41%), Positives = 33/54 (62%), Gaps = 0/54 (0%)
Query 59 HDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDI 112
DVV L D+P+ + +G+ GA+V Y G YEV+FT G T+A+ TL+ +
Sbjct 7 FDVVELLVDLPEDRVYSGNQGAIVECYYDGNYEVEFTNNEGETLALCTLSEEQF 60
>gi|172036936|ref|YP_001803437.1| hypothetical protein cce_2021 [Cyanothece sp. ATCC 51142]
gi|171698390|gb|ACB51371.1| hypothetical protein cce_2021 [Cyanothece sp. ATCC 51142]
Length=96
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/70 (42%), Positives = 36/70 (52%), Gaps = 5/70 (7%)
Query 46 PPIHARSGPMYAEH----DVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGC 100
P I RS M + DVV LT D+P+ L G VG VV A G YEV+F+ NG
Sbjct 4 PLIFWRSNKMKTDKVKLLDVVALTVDIPEDKLFKGQVGTVVDILADGTAYEVEFSDRNGR 63
Query 101 TVAVVTLAGD 110
T + L+ D
Sbjct 64 TYESLGLSAD 73
>gi|209527352|ref|ZP_03275860.1| conserved hypothetical protein [Arthrospira maxima CS-328]
gi|209492210|gb|EDZ92557.1| conserved hypothetical protein [Arthrospira maxima CS-328]
Length=69
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (34%), Positives = 34/63 (54%), Gaps = 0/63 (0%)
Query 60 DVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRRRRE 119
DVV LT ++PD +L G VG ++ Y +EV+F G T A+ TL+ + + +
Sbjct 5 DVVALTENLPDFNLYKGQVGTIIEVYEPDVFEVEFVDLQGKTYALETLSVNQLMQLHYQP 64
Query 120 IPH 122
+P
Sbjct 65 LPQ 67
>gi|119494545|ref|ZP_01624691.1| hypothetical protein L8106_09056 [Lyngbya sp. PCC 8106]
gi|119452119|gb|EAW33327.1| hypothetical protein L8106_09056 [Lyngbya sp. PCC 8106]
Length=108
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 0/50 (0%)
Query 59 HDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLA 108
DVV L D+ + L AGD GA+V +Y+ YEV+FT G T+A+ TL+
Sbjct 7 FDVVELLVDISESGLQAGDHGAIVEKYSDRAYEVEFTNPEGETLALHTLS 56
>gi|219883415|ref|YP_002478575.1| hypothetical protein Cyan7425_5274 [Cyanothece sp. PCC 7425]
gi|219867561|gb|ACL47897.1| conserved hypothetical protein [Cyanothece sp. PCC 7425]
Length=108
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/51 (48%), Positives = 33/51 (65%), Gaps = 0/51 (0%)
Query 57 AEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTL 107
A DVV L ++P+ +L AG GA+V +Y YEV+FT +G T A+VTL
Sbjct 5 ALFDVVELLINLPEHNLQAGAQGAIVEQYPDQRYEVEFTNLDGETTALVTL 55
>gi|219883422|ref|YP_002478582.1| hypothetical protein Cyan7425_5281 [Cyanothece sp. PCC 7425]
gi|219867568|gb|ACL47904.1| conserved hypothetical protein [Cyanothece sp. PCC 7425]
Length=69
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/58 (35%), Positives = 31/58 (54%), Gaps = 0/58 (0%)
Query 66 RDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRRRREIPHV 123
RD+PD +L G VG +V YA +EV+F G T A+ TL + + + +P +
Sbjct 11 RDLPDLNLHQGQVGTIVEVYAPNIFEVEFVDLQGKTYAIATLDANQVMQLHYQALPQI 68
>gi|254432840|ref|ZP_05046543.1| hypothetical protein CPCC7001_2734 [Cyanobium sp. PCC 7001]
gi|197627293|gb|EDY39852.1| hypothetical protein CPCC7001_2734 [Cyanobium sp. PCC 7001]
Length=82
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/45 (47%), Positives = 30/45 (67%), Gaps = 0/45 (0%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANG 99
M+A H V LT+D+ + L +GD+GAVV + YEV+F AA+G
Sbjct 1 MFALHQTVALTQDISEAGLQSGDLGAVVAIHDPETYEVEFVAASG 45
>gi|46255124|ref|YP_006036.1| hypothetical protein TT_P0053 [Thermus thermophilus HB27]
gi|46197973|gb|AAS82383.1| hypothetical protein TT_P0053 [Thermus thermophilus HB27]
Length=65
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/55 (46%), Positives = 33/55 (60%), Gaps = 0/55 (0%)
Query 62 VVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRR 116
+VL RD L AGDVG VV Y GGY V+F G T+A++ LA +++ P R
Sbjct 1 MVLKRDKEGWGLEAGDVGTVVLVYPHGGYVVEFVDHEGNTLALLDLAEEEVAPLR 55
>gi|148656078|ref|YP_001276283.1| hypothetical protein RoseRS_1945 [Roseiflexus sp. RS-1]
gi|148568188|gb|ABQ90333.1| hypothetical protein RoseRS_1945 [Roseiflexus sp. RS-1]
Length=72
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/51 (44%), Positives = 29/51 (57%), Gaps = 0/51 (0%)
Query 60 DVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGD 110
DVV L D+PD L G VG +V A +EV+F+ NG T A++ L D
Sbjct 9 DVVALLEDIPDYRLSRGQVGTIVEELAPHVFEVEFSDDNGRTYALLALRSD 59
>gi|261821050|ref|YP_003259156.1| hypothetical protein Pecwa_1763 [Pectobacterium wasabiae WPP163]
gi|261605063|gb|ACX87549.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163]
Length=69
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/58 (38%), Positives = 34/58 (59%), Gaps = 2/58 (3%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYA--AGGYEVDFTAANGCTVAVVTLAGD 110
Y+ DV+ L D+P++ L G +GA+V Y + YE++F NG T+A +TL D
Sbjct 3 FYSLFDVIYLKNDLPEEGLKKGMLGAIVHIYNEPSPAYEIEFCDDNGETLACITLTPD 60
>gi|166367522|ref|YP_001659795.1| hypothetical protein MAE_47810 [Microcystis aeruginosa NIES-843]
gi|166089895|dbj|BAG04603.1| hypothetical protein MAE_47810 [Microcystis aeruginosa NIES-843]
Length=102
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/49 (39%), Positives = 31/49 (64%), Gaps = 0/49 (0%)
Query 59 HDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTL 107
D+V L D+P+ +LI G+ G +V Y G YE++F+ G T+A+ +L
Sbjct 7 FDLVELLVDLPEHNLIMGEQGTIVEDYNDGCYEIEFSNDLGETIALCSL 55
>gi|254423555|ref|ZP_05037273.1| hypothetical protein S7335_3711 [Synechococcus sp. PCC 7335]
gi|196191044|gb|EDX86008.1| hypothetical protein S7335_3711 [Synechococcus sp. PCC 7335]
Length=198
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/53 (40%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 60 DVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDI 112
DVV LT +P +L+ G VG +V A YEV+F+ NG T A++ L + +
Sbjct 12 DVVALTEALPKYNLLPGQVGTIVETLAPSVYEVEFSDDNGQTYAMLPLKAEQL 64
>gi|118466051|ref|YP_883957.1| hypothetical protein MAV_4833 [Mycobacterium avium 104]
gi|254777270|ref|ZP_05218786.1| hypothetical protein MaviaA2_21734 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118167338|gb|ABK68235.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=69
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/60 (39%), Positives = 35/60 (59%), Gaps = 7/60 (11%)
Query 61 VVVLTRDVPDKSLIAGDVGAVVGRYAA-------GGYEVDFTAANGCTVAVVTLAGDDIR 113
++ L R +P+ +L AG G +V Y YEV+F+ A+G T A+VTL+GDD+
Sbjct 1 MIRLLRPLPEHNLPAGSRGTIVMDYTKDSDSTLPSAYEVEFSDADGVTQALVTLSGDDLE 60
>gi|67923452|ref|ZP_00516929.1| hypothetical protein CwatDRAFT_2943 [Crocosphaera watsonii WH
8501]
gi|67854687|gb|EAM49969.1| hypothetical protein CwatDRAFT_2943 [Crocosphaera watsonii WH
8501]
Length=80
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/52 (47%), Positives = 31/52 (60%), Gaps = 1/52 (1%)
Query 60 DVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGD 110
DVV LT D+P++ L G VG VV A G YEV+F+ NG T + L+ D
Sbjct 10 DVVALTVDLPEEQLFKGQVGTVVDILADGTAYEVEFSDRNGRTYESLGLSAD 61
>gi|309792600|ref|ZP_07687062.1| hypothetical protein OSCT_3013 [Oscillochloris trichoides DG6]
gi|308225414|gb|EFO79180.1| hypothetical protein OSCT_3013 [Oscillochloris trichoides DG6]
Length=72
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/53 (42%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 60 DVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTLAGDDI 112
DVV L D+PD+ L G VG +V A +EV+F+ NG T A++ L D +
Sbjct 9 DVVALLNDLPDRGLRRGQVGTIVEDLAPDVFEVEFSDDNGRTYALLALHADQL 61
>gi|186686138|ref|YP_001869334.1| hypothetical protein Npun_F6102 [Nostoc punctiforme PCC 73102]
gi|186468590|gb|ACC84391.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
Length=72
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/48 (44%), Positives = 28/48 (59%), Gaps = 0/48 (0%)
Query 60 DVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTL 107
DVV LT D+P+ L G VG +V Y G +EV+F+ G A+ TL
Sbjct 5 DVVALTEDLPESGLHRGQVGTIVEAYEPGVFEVEFSDLTGKAYAIETL 52
>gi|159027950|emb|CAO87113.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length=102
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/49 (37%), Positives = 31/49 (64%), Gaps = 0/49 (0%)
Query 59 HDVVVLTRDVPDKSLIAGDVGAVVGRYAAGGYEVDFTAANGCTVAVVTL 107
D+V L D+P+ +L+ G+ G +V Y G YE++F+ G T+A+ +L
Sbjct 7 FDLVELLVDLPEHNLMMGEQGTIVEDYNDGCYEIEFSNDLGETIALCSL 55
>gi|284040701|ref|YP_003390631.1| hypothetical protein Slin_5868 [Spirosoma linguale DSM 74]
gi|283819994|gb|ADB41832.1| hypothetical protein Slin_5868 [Spirosoma linguale DSM 74]
Length=85
Score = 41.2 bits (95), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/59 (45%), Positives = 33/59 (56%), Gaps = 1/59 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAGG-YEVDFTAANGCTVAVVTLAGDDI 112
M E D+V L D P L GDVG VV Y +G YEV+F A G TV + TL +++
Sbjct 1 MIQELDLVALLADRPALQLRRGDVGTVVHVYGSGDLYEVEFINAKGETVGIETLNANEV 59
>gi|336460224|gb|EGO39127.1| hypothetical protein MAPs_42520 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=69
Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/60 (37%), Positives = 34/60 (57%), Gaps = 7/60 (11%)
Query 61 VVVLTRDVPDKSLIAGDVGAVVGRYAA-------GGYEVDFTAANGCTVAVVTLAGDDIR 113
++ L R +P+ +L AG G +V Y YEV+F+ +G T A+VTL+GDD+
Sbjct 1 MIRLLRPLPEHNLPAGSRGTIVMDYTKDSDSTLPSAYEVEFSDVDGVTQALVTLSGDDLE 60
>gi|257062096|ref|YP_003139984.1| hypothetical protein Cyan8802_4363 [Cyanothece sp. PCC 8802]
gi|256592262|gb|ACV03149.1| hypothetical protein Cyan8802_4363 [Cyanothece sp. PCC 8802]
Length=80
Score = 40.8 bits (94), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/67 (35%), Positives = 33/67 (50%), Gaps = 4/67 (5%)
Query 62 VVLTRDVPDKSLIAGDVGAVVG----RYAAGGYEVDFTAANGCTVAVVTLAGDDIRPRRR 117
V LT D+P L GD+ +V + GY ++ A G T+AV+T+A I
Sbjct 9 VALTEDLPQYKLCRGDIATIVEHHPVKNGEDGYSLEVFNAVGETLAVITVAESQIESLMN 68
Query 118 REIPHVR 124
E+ HVR
Sbjct 69 NEVLHVR 75
>gi|218439132|ref|YP_002377461.1| hypothetical protein PCC7424_2171 [Cyanothece sp. PCC 7424]
gi|218171860|gb|ACK70593.1| conserved hypothetical protein [Cyanothece sp. PCC 7424]
Length=66
Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 34/59 (58%), Gaps = 1/59 (1%)
Query 55 MYAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAAG-GYEVDFTAANGCTVAVVTLAGDDI 112
M E D+V LT D+ + L G AVV YA G +EV+F +G T+A++TL D+
Sbjct 1 MIKELDIVTLTHDIQEHGLKKGSQRAVVHCYADGQAFEVEFVNDSGKTLALLTLEKADL 59
>gi|186896942|ref|YP_001874054.1| hypothetical protein YPTS_3644 [Yersinia pseudotuberculosis PB1/+]
gi|186699968|gb|ACC90597.1| conserved hypothetical protein [Yersinia pseudotuberculosis PB1/+]
Length=65
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/54 (43%), Positives = 31/54 (58%), Gaps = 2/54 (3%)
Query 56 YAEHDVVVLTRDVPDKSLIAGDVGAVVGRYA--AGGYEVDFTAANGCTVAVVTL 107
Y+ D+V L D+PD+ L AG GAVV Y+ YEV+F G T+A + L
Sbjct 3 YSLFDIVTLAHDIPDEGLCAGMQGAVVDVYSKPVTAYEVEFCDDEGRTIAQLAL 56
>gi|262044243|ref|ZP_06017310.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038400|gb|EEW39604.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length=239
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (40%), Positives = 33/53 (63%), Gaps = 2/53 (3%)
Query 57 AEHDVVVLTRDVPDKSLIAGDVGAVVGRYAA--GGYEVDFTAANGCTVAVVTL 107
AE DVVVL+ D+P++ L+ G +G +V + + GY V+F G T+A+ L
Sbjct 16 AELDVVVLSEDLPNEGLVKGTLGTIVMVFNSPTTGYLVEFCDEKGKTIAMPVL 68
>gi|238895122|ref|YP_002919857.1| hypothetical protein KP1_3162 [Klebsiella pneumoniae NTUH-K2044]
gi|238547439|dbj|BAH63790.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length=227
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (40%), Positives = 33/53 (63%), Gaps = 2/53 (3%)
Query 57 AEHDVVVLTRDVPDKSLIAGDVGAVVGRYAA--GGYEVDFTAANGCTVAVVTL 107
AE DVVVL+ D+P++ L+ G +G +V + + GY V+F G T+A+ L
Sbjct 4 AELDVVVLSEDLPNEGLVKGTLGTIVMVFNSPTTGYLVEFCDEKGKTIAMPVL 56
>gi|254422715|ref|ZP_05036433.1| hypothetical protein S7335_2867 [Synechococcus sp. PCC 7335]
gi|196190204|gb|EDX85168.1| hypothetical protein S7335_2867 [Synechococcus sp. PCC 7335]
Length=105
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/67 (39%), Positives = 36/67 (54%), Gaps = 5/67 (7%)
Query 55 MYAEHDVVVLTRDVPD----KSLIAGDVGAVVGRYA-AGGYEVDFTAANGCTVAVVTLAG 109
M E DV+ LTRD+ + K + G GAVV Y+ G+EV+F G +V+TL
Sbjct 1 MIKELDVITLTRDIKEQGSGKVVPKGSRGAVVHCYSDTQGFEVEFMDDTGENSSVLTLEK 60
Query 110 DDIRPRR 116
DI+ R
Sbjct 61 SDIQLDR 67
>gi|269121885|ref|YP_003310062.1| hypothetical protein Sterm_3290 [Sebaldella termitidis ATCC 33386]
gi|268615763|gb|ACZ10131.1| conserved hypothetical protein [Sebaldella termitidis ATCC 33386]
Length=65
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query 56 YAEHDVVVLTRDVPDKSLIAGDVGAVVGRYAA--GGYEVDFTAANGCTVA 103
+ E+D +++++D PD + GD G +V Y YEV+F+ G T+A
Sbjct 3 FKEYDTIIVSKDYPDYKIKKGDTGVIVMIYTKPNLAYEVEFSDEVGRTIA 52
Lambda K H
0.320 0.135 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129319095676
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40