BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0613c Length=855 Score E Sequences producing significant alignments: (Bits) Value gi|15607753|ref|NP_215127.1| hypothetical protein Rv0613c [Mycob... 1658 0.0 gi|289446169|ref|ZP_06435913.1| conserved hypothetical protein [... 1657 0.0 gi|289744327|ref|ZP_06503705.1| conserved hypothetical protein [... 1657 0.0 gi|148821815|ref|YP_001286569.1| hypothetical protein TBFG_10624... 1656 0.0 gi|340625636|ref|YP_004744088.1| hypothetical protein MCAN_06151... 1655 0.0 gi|308374058|ref|ZP_07667701.1| putative SEC-C motif containing ... 1182 0.0 gi|289752655|ref|ZP_06512033.1| conserved hypothetical protein [... 990 0.0 gi|315446130|ref|YP_004079009.1| SEC-C motif-containing protein,... 981 0.0 gi|120402155|ref|YP_951984.1| SecC motif-containing protein [Myc... 966 0.0 gi|254230949|ref|ZP_04924276.1| hypothetical protein TBCG_00608 ... 934 0.0 gi|118473383|ref|YP_885675.1| hypothetical protein MSMEG_1285 [M... 870 0.0 gi|240169386|ref|ZP_04748045.1| hypothetical protein MkanA1_0873... 832 0.0 gi|289568551|ref|ZP_06448778.1| hypothetical protein TBJG_01055 ... 815 0.0 gi|298524103|ref|ZP_07011512.1| conserved hypothetical protein [... 737 0.0 gi|289749112|ref|ZP_06508490.1| hypothetical protein TBDG_03748 ... 709 0.0 gi|289760736|ref|ZP_06520114.1| conserved hypothetical protein [... 648 0.0 gi|306781550|ref|ZP_07419887.1| hypothetical protein TMBG_03471 ... 630 3e-178 gi|333989271|ref|YP_004521885.1| hypothetical protein JDM601_063... 514 3e-143 gi|308374057|ref|ZP_07667700.1| hypothetical protein TMFG_03279 ... 467 4e-129 gi|226359545|ref|YP_002777323.1| hypothetical protein ROP_01310 ... 458 2e-126 gi|226365319|ref|YP_002783102.1| hypothetical protein ROP_59100 ... 327 6e-87 gi|325676580|ref|ZP_08156258.1| tetratricopeptide repeat family ... 299 1e-78 gi|312138728|ref|YP_004006064.1| hypothetical protein REQ_12860 ... 299 2e-78 gi|226308702|ref|YP_002768662.1| hypothetical protein RER_52150 ... 292 2e-76 gi|229488928|ref|ZP_04382794.1| tetratricopeptide repeat family ... 291 3e-76 gi|229489113|ref|ZP_04382979.1| tetratricopeptide repeat family ... 238 3e-60 gi|226308703|ref|YP_002768663.1| hypothetical protein RER_52160 ... 234 4e-59 gi|333989270|ref|YP_004521884.1| SecC motif-containing protein [... 192 2e-46 gi|111022811|ref|YP_705783.1| hypothetical protein RHA1_ro05848 ... 110 1e-21 gi|111025241|ref|YP_707661.1| hypothetical protein RHA1_ro08459 ... 89.0 3e-15 gi|333920963|ref|YP_004494544.1| Tetratricopeptide repeat family... 87.0 1e-14 gi|116624812|ref|YP_826968.1| SecC motif-containing protein [Can... 80.9 9e-13 gi|253699919|ref|YP_003021108.1| SEC-C motif domain protein [Geo... 80.1 2e-12 gi|31790367|gb|AAP58624.1| hypothetical protein [uncultured Acid... 77.4 1e-11 gi|316932200|ref|YP_004107182.1| hypothetical protein Rpdx1_0815... 68.2 6e-09 gi|338531363|ref|YP_004664697.1| hypothetical protein LILAB_0854... 68.2 7e-09 gi|153006122|ref|YP_001380447.1| SecC motif-containing protein [... 67.8 8e-09 gi|254451191|ref|ZP_05064628.1| conserved hypothetical protein [... 67.0 1e-08 gi|257094679|ref|YP_003168320.1| SEC-C motif domain-containing p... 66.6 2e-08 gi|148655739|ref|YP_001275944.1| SecC motif-containing protein [... 65.9 3e-08 gi|156743381|ref|YP_001433510.1| SecC motif-containing protein [... 64.3 1e-07 gi|146279553|ref|YP_001169711.1| hypothetical protein Rsph17025_... 62.8 3e-07 gi|309791557|ref|ZP_07686056.1| SecC motif-containing protein [O... 61.6 6e-07 gi|339483667|ref|YP_004695453.1| SEC-C motif domain-containing p... 60.1 2e-06 gi|333978065|ref|YP_004516010.1| SEC-C motif domain-containing p... 57.4 1e-05 gi|108757805|ref|YP_628325.1| hypothetical protein MXAN_0042 [My... 56.6 2e-05 gi|163848371|ref|YP_001636415.1| SecC motif-containing protein [... 54.3 1e-04 gi|258512924|ref|YP_003189181.1| hypothetical protein APA01_4014... 54.3 1e-04 gi|163797760|ref|ZP_02191707.1| hypothetical protein BAL199_1394... 53.9 1e-04 gi|172058433|ref|YP_001814893.1| preprotein translocase, SecA su... 53.5 1e-04 >gi|15607753|ref|NP_215127.1| hypothetical protein Rv0613c [Mycobacterium tuberculosis H37Rv] gi|15840015|ref|NP_335052.1| hypothetical protein MT0643 [Mycobacterium tuberculosis CDC1551] gi|31791796|ref|NP_854289.1| hypothetical protein Mb0630c [Mycobacterium bovis AF2122/97] 37 more sequence titles Length=855 Score = 1658 bits (4294), Expect = 0.0, Method: Compositional matrix adjust. Identities = 854/855 (99%), Positives = 855/855 (100%), Gaps = 0/855 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL Sbjct 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 Query 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL Sbjct 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 Query 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL Sbjct 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 Query 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR Sbjct 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 Query 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV Sbjct 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 Query 661 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD Sbjct 661 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 Query 721 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD Sbjct 721 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 Query 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA Sbjct 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 Query 841 RGGMDADRLRTALGL 855 RGGMDADRLRTALGL Sbjct 841 RGGMDADRLRTALGL 855 >gi|289446169|ref|ZP_06435913.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289419127|gb|EFD16328.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=855 Score = 1657 bits (4292), Expect = 0.0, Method: Compositional matrix adjust. Identities = 853/855 (99%), Positives = 854/855 (99%), Gaps = 0/855 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERG AL Sbjct 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGSAL 420 Query 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL Sbjct 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 Query 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL Sbjct 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 Query 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR Sbjct 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 Query 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV Sbjct 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 Query 661 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD Sbjct 661 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 Query 721 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD Sbjct 721 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 Query 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA Sbjct 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 Query 841 RGGMDADRLRTALGL 855 RGGMDADRLRTALGL Sbjct 841 RGGMDADRLRTALGL 855 >gi|289744327|ref|ZP_06503705.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289756694|ref|ZP_06516072.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|294996128|ref|ZP_06801819.1| hypothetical protein Mtub2_16910 [Mycobacterium tuberculosis 210] gi|289684855|gb|EFD52343.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289712258|gb|EFD76270.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|326905164|gb|EGE52097.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis W-148] gi|339293652|gb|AEJ45763.1| hypothetical protein CCDC5079_0573 [Mycobacterium tuberculosis CCDC5079] gi|339297293|gb|AEJ49403.1| hypothetical protein CCDC5180_0566 [Mycobacterium tuberculosis CCDC5180] Length=855 Score = 1657 bits (4291), Expect = 0.0, Method: Compositional matrix adjust. Identities = 853/855 (99%), Positives = 854/855 (99%), Gaps = 0/855 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL Sbjct 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 Query 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL Sbjct 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 Query 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL Sbjct 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 Query 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR Sbjct 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 Query 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV Sbjct 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 Query 661 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD Sbjct 661 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 Query 721 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 GDTLRVE NSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD Sbjct 721 GDTLRVEANSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 Query 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA Sbjct 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 Query 841 RGGMDADRLRTALGL 855 RGGMDADRLRTALGL Sbjct 841 RGGMDADRLRTALGL 855 >gi|148821815|ref|YP_001286569.1| hypothetical protein TBFG_10624 [Mycobacterium tuberculosis F11] gi|253797550|ref|YP_003030551.1| hypothetical protein TBMG_00621 [Mycobacterium tuberculosis KZN 1435] gi|254549571|ref|ZP_05140018.1| hypothetical protein Mtube_03760 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] 9 more sequence titles Length=855 Score = 1656 bits (4289), Expect = 0.0, Method: Compositional matrix adjust. Identities = 853/855 (99%), Positives = 854/855 (99%), Gaps = 0/855 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPI TLCEHEEYGRLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPIITLCEHEEYGRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL Sbjct 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 Query 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL Sbjct 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 Query 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL Sbjct 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 Query 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR Sbjct 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 Query 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV Sbjct 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 Query 661 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD Sbjct 661 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 Query 721 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD Sbjct 721 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 Query 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA Sbjct 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 Query 841 RGGMDADRLRTALGL 855 RGGMDADRLRTALGL Sbjct 841 RGGMDADRLRTALGL 855 >gi|340625636|ref|YP_004744088.1| hypothetical protein MCAN_06151 [Mycobacterium canettii CIPT 140010059] gi|340003826|emb|CCC42955.1| hypothetical protein MCAN_06151 [Mycobacterium canettii CIPT 140010059] Length=855 Score = 1655 bits (4286), Expect = 0.0, Method: Compositional matrix adjust. Identities = 853/855 (99%), Positives = 854/855 (99%), Gaps = 0/855 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL Sbjct 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 Query 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL Sbjct 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 Query 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL Sbjct 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 Query 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR Sbjct 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 Query 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV Sbjct 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLV 660 Query 661 NTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 NTEGDSLAICEASVRV DPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD Sbjct 661 NTEGDSLAICEASVRVGDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLD 720 Query 721 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD Sbjct 721 GDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPD 780 Query 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA Sbjct 781 PDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGA 840 Query 841 RGGMDADRLRTALGL 855 RGGMDADRLRTALGL Sbjct 841 RGGMDADRLRTALGL 855 >gi|308374058|ref|ZP_07667701.1| putative SEC-C motif containing protein [Mycobacterium tuberculosis SUMu006] gi|308343213|gb|EFP32064.1| putative SEC-C motif containing protein [Mycobacterium tuberculosis SUMu006] Length=638 Score = 1182 bits (3057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 610/611 (99%), Positives = 611/611 (100%), Gaps = 0/611 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL Sbjct 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 Query 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL Sbjct 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 Query 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL Sbjct 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 Query 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR Sbjct 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 Query 601 AGQLICARPVP 611 AGQLICARPVP Sbjct 601 AGQLICARPVP 611 >gi|289752655|ref|ZP_06512033.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289693242|gb|EFD60671.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=641 Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust. Identities = 560/615 (92%), Positives = 563/615 (92%), Gaps = 9/615 (1%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGG G + Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGGGRAGPAHRDAGAQGAA 360 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 V VR ALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL Sbjct 361 RGGVCVRCCSRSALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 Query 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL Sbjct 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 Query 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL Sbjct 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 Query 541 EVRGSLLPDDERLLAE----QWLLVERSVFEVEH-VQPGEGVIVRDVR-TGDTHEVHERA 594 EVRGSLLPDDERLL W +VEH GVIVRDVR VHERA Sbjct 541 EVRGSLLPDDERLLCRANGCSW---SGRCSKVEHRATLARGVIVRDVRPRRHPMRVHERA 597 Query 595 ASRQLRAGQLICARP 609 ASRQLRAGQLICARP Sbjct 598 ASRQLRAGQLICARP 612 >gi|315446130|ref|YP_004079009.1| SEC-C motif-containing protein,tetratricopeptide repeat protein [Mycobacterium sp. Spyr1] gi|315264433|gb|ADU01175.1| SEC-C motif-containing protein,tetratricopeptide repeat protein [Mycobacterium sp. Spyr1] Length=841 Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust. Identities = 525/858 (62%), Positives = 630/858 (74%), Gaps = 21/858 (2%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +A D T +ARIL E+GPL EDDIA RL ++G+ +PD VL L E + PA LVD+ Sbjct 1 MAAQLDPTDVLARILVENGPLREDDIAHRLREAGIRNPDDVLPQLLNEIDCPAVPLVDES 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLP L+AGR+ THR+ A E HD+L VTPDLDP+T LCE EE+ RLADG+ + L Sbjct 61 WVWLPELMAGRILTHRVDAQELAHDILIVTPDLDPLTHLCEFEEFARLADGTPISVALPA 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 +DE++L+ RG+P + +D GGAL+L PGTL+ L AAG+LVG+RLT AGL L R+ TA Sbjct 121 FDEDVLDERGVPPDMVDDGGALILPPGTLSDLDVAAGELVGLRLTPAGLTLTRV-TAETS 179 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 SVGA LA +DP+EP F +AVW+ACV D A FTEPV PL EI D H L D LAP Sbjct 180 PSVGAALAATLDPEEPVAFDSAVWSACVADTALFTEPVEPLSEIADAHNLVRRLDVLAPA 239 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEA--TDPDELPRDVLA 298 F++D WRF+ CE+++ R+D+ + A+AL TL+ ++E MS LL +D +E+P Sbjct 240 EFDYDRWRFDIDCEVMSRRYDIAEDAALALRTLVSIYEQMSQLLTMPLSDDEEVPDGDAP 299 Query 299 TAAETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKV 358 T A +L+ + GA LADP LAE+L+AETVG + GAAALGL E LEP+V Sbjct 300 TPALAGYR-------ELVAEFGAELADPHLAEVLLAETVGRNPDGAAALGLFAETLEPQV 352 Query 359 PRAARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGL 418 PR ARVA RWLR+VAL+RIGD+EAAERELL AE+MDT+WPLPL DLARIASDRGD ER L Sbjct 353 PRRARVAFRWLRSVALERIGDIEAAERELLTAETMDTDWPLPLYDLARIASDRGDVERAL 412 Query 419 ALLRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVD 478 ALL RAG PD PL +L HR + R D+GRNE CWCGSGRKYKKCHLG+E L L +RV Sbjct 413 ALLHRAGAAPDDPLFTVLRSHRPEARPDVGRNEPCWCGSGRKYKKCHLGKEQLSLPDRVG 472 Query 479 WLYAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAE 538 WLY+KA+QHAL W GL+AE++YER R+ D+ DE DP+V+DAVLFEG A A+ Sbjct 473 WLYSKAAQHALISGWRGLVAELNYERNRHHDAPDE------AIDPVVIDAVLFEGEALAD 526 Query 539 FLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQ 598 FL VRG LLPDDER LAEQWLL ERS+FEVE V PG G++VRDVRTGD HEV ER ASRQ Sbjct 527 FLAVRGPLLPDDERSLAEQWLLSERSLFEVEEVHPGRGLVVRDVRTGDVHEVRERTASRQ 586 Query 599 LRAGQLICARPVPAGD-TMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPP 657 L A QLIC R +P GD T FGG+EPVALH+R+ L+ELLD+ P PV +VA LSRRFAPP Sbjct 587 LTARQLICTRLLPIGDGTAQLFGGVEPVALHDRSALMELLDEGPAPVEIVAFLSRRFAPP 646 Query 658 TLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATL 717 L NTEGD L ICEA VRV D A ++ ALDG YDRV+ E P+W EHVT DGM R+RAT+ Sbjct 647 MLTNTEGDPLMICEAVVRVSDSARMEAALDGTYDRVEDAELPQWFEHVTTDGMDRIRATV 706 Query 718 VLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAG 777 VL+GDTLRVETNSE RMDRVL TL RLDP M V+DD R P+ + RE AA +MP T G Sbjct 707 VLEGDTLRVETNSEERMDRVLETLERLDPGMQVVDDTRTPMDDPREMAA---KMPATAKG 763 Query 778 APDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAG 837 A DP+ P++AA L+ I DYET WLD+ IPALDGHTPRQAADDPTRR DLI+LLD+FP Sbjct 764 AVDPEDPQVAALLDAMILDYETKWLDESIPALDGHTPRQAADDPTRRPDLIRLLDSFPTD 823 Query 838 AGARGGMDADRLRTALGL 855 AG R M+ADRLR ALGL Sbjct 824 AG-RHAMNADRLRAALGL 840 >gi|120402155|ref|YP_951984.1| SecC motif-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954973|gb|ABM11978.1| SEC-C motif domain protein [Mycobacterium vanbaalenii PYR-1] Length=864 Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/863 (62%), Positives = 621/863 (72%), Gaps = 24/863 (2%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 VA D T+A+A IL EHGPL +D IA RL + GVADP+ +L L E + PA LVD+ Sbjct 17 VAAQLDPTKALATILIEHGPLPKDAIAHRLREMGVADPEDLLPRLLNEIDCPAVPLVDES 76 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLP LLAGR+FTHR+ A E HD+L VTPDLD IT LCE E Y RL DGS + L Sbjct 77 WVWLPALLAGRIFTHRVTAQELAHDVLLVTPDLDAITHLCEFEPYARLVDGSPVSVALPA 136 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 +DE++L+ RG+P E +D GGAL+L PGTL LG GDLVG+RL GL L ++ TA Sbjct 137 FDEDVLDERGVPPEMVDDGGALVLPPGTLRGLGVVDGDLVGLRLAPEGLTLAQV-TADPS 195 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 +VGA LA ++PDEP F +AVWTACV A FTEP PL EI HGL D LAP Sbjct 196 PAVGAALAATLNPDEPVSFDSAVWTACVAHSALFTEPTPPLSEIAADHGLEARGDLLAPA 255 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GF+FD WRFE CE+L R+DLD +DA+A+ L ++E MS L+ LP D Sbjct 256 GFDFDRWRFELDCEVLKRRYDLDDDDALAVRALKAIYEQMSQLITM-----LPADEDFAD 310 Query 301 AETATETGS-------DSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEM 353 D +L+ ++GA LADP LAE+LVAET+G D GAAALGL E Sbjct 311 DADEDAAAEDAPVPPLDGYQELVAEMGAELADPRLAEVLVAETLGRDPDGAAALGLFAET 370 Query 354 LEPKVPRAARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGD 413 LEP+VPR ARVA RWLRAVAL+R+GD+E+AERELLAAESMDT+WPLPL DLARIASDRGD Sbjct 371 LEPQVPRRARVAFRWLRAVALERMGDIESAERELLAAESMDTDWPLPLYDLARIASDRGD 430 Query 414 AERGLALLRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPL 473 ERGLALLRRAG +PD PL+ +L R + R D+GRNE CWCGSGRKYKKCHLG+E L Sbjct 431 VERGLALLRRAGADPDDPLLEMLSSFRGEARPDVGRNEPCWCGSGRKYKKCHLGKEQPAL 490 Query 474 AERVDWLYAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEG 533 ERV WLY+KA+QHAL W L+ E+ YER ++ D+ DE ADPLV+DA LFEG Sbjct 491 PERVGWLYSKAAQHALMSGWRALIVELDYERNQFHDAPDE------TADPLVVDAALFEG 544 Query 534 GAFAEFLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHER 593 GAF +FL VRG LLP+DER LAEQWLLV+RS+FEV V+PG GV VRDVRTGD HEV ER Sbjct 545 GAFEDFLAVRGPLLPEDERSLAEQWLLVDRSLFEVGQVRPGHGVTVRDVRTGDIHEVQER 604 Query 594 AASRQLRAGQLICARPVPAG-DTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSR 652 ASR L++GQLIC R +PAG DT FFGG+EPVALH+R LI LLD+ PDPV LVA LS Sbjct 605 TASRHLKSGQLICTRVLPAGDDTAQFFGGLEPVALHQRDALIALLDEGPDPVDLVAFLSL 664 Query 653 RFAPPTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLR 712 RFAPPTL NTEGD + ICEA+V V D A IQ ALD YDRV+ EPP+W EHVT GM R Sbjct 665 RFAPPTLTNTEGDPMIICEATVHVGDAASIQSALDDTYDRVEDAEPPKWFEHVTTHGMER 724 Query 713 VRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMP 772 +RATL LDG+TLRVETNSE RMDRVLAT+ RLDPAM VL+D R + + R A+A +MP Sbjct 725 IRATLALDGETLRVETNSEERMDRVLATVARLDPAMQVLEDTREYVDDPR---AMAARMP 781 Query 773 VTGAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLD 832 T GA +PD PE+AA L+ I DYE WLD+PIPALDGHTPRQAADDPTRR DLI+LLD Sbjct 782 ETAKGAIEPDDPEIAALLDAMILDYEAKWLDEPIPALDGHTPRQAADDPTRRPDLIRLLD 841 Query 833 TFPAGAGARGGMDADRLRTALGL 855 +FPA AG R GM DRLR ALGL Sbjct 842 SFPADAG-RHGMSVDRLRAALGL 863 >gi|254230949|ref|ZP_04924276.1| hypothetical protein TBCG_00608 [Mycobacterium tuberculosis C] gi|124600008|gb|EAY59018.1| hypothetical protein TBCG_00608 [Mycobacterium tuberculosis C] Length=910 Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/501 (99%), Positives = 500/501 (99%), Gaps = 0/501 (0%) Query 355 EPKVPRAARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDA 414 EPKVPRAARVA RWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDA Sbjct 410 EPKVPRAARVAGRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDA 469 Query 415 ERGLALLRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLA 474 ERGLALLRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLA Sbjct 470 ERGLALLRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLA 529 Query 475 ERVDWLYAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGG 534 ERVDWLYAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGG Sbjct 530 ERVDWLYAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGG 589 Query 535 AFAEFLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERA 594 AFAEFLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERA Sbjct 590 AFAEFLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERA 649 Query 595 ASRQLRAGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRF 654 ASRQLRAGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRF Sbjct 650 ASRQLRAGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRF 709 Query 655 APPTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVR 714 APPTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVR Sbjct 710 APPTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVR 769 Query 715 ATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVT 774 ATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVT Sbjct 770 ATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVT 829 Query 775 GAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTF 834 GAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTF Sbjct 830 GAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTF 889 Query 835 PAGAGARGGMDADRLRTALGL 855 PAGAGARGGMDADRLRTALGL Sbjct 890 PAGAGARGGMDADRLRTALGL 910 Score = 545 bits (1405), Expect = 1e-152, Method: Compositional matrix adjust. Identities = 277/278 (99%), Positives = 278/278 (100%), Gaps = 0/278 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 4 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 63 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 64 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 123 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 124 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 183 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 184 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 243 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHE 278 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLH+ Sbjct 244 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHD 281 >gi|118473383|ref|YP_885675.1| hypothetical protein MSMEG_1285 [Mycobacterium smegmatis str. MC2 155] gi|118174670|gb|ABK75566.1| tetratricopeptide repeat family protein [Mycobacterium smegmatis str. MC2 155] Length=801 Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/849 (60%), Positives = 585/849 (69%), Gaps = 54/849 (6%) Query 8 TQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDRWVWLPTL 67 T AVARILAE GPL D+I R L SG P+ V+ L + P LVDDRWVWLPT+ Sbjct 5 TDAVARILAEQGPLHTDEIERLLQASGEPVPEPVVDELSM----PVGMLVDDRWVWLPTV 60 Query 68 LAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEELLE 127 L GRVFTHRL A E HDML DLDP++ L +EY RLADGS +A YD+ELLE Sbjct 61 LDGRVFTHRLSAHEVAHDMLDAAVDLDPVSDLFHLDEYLRLADGSPVSFAVADYDDELLE 120 Query 128 RRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGADTSVGARL 187 RGIP E G +LL PGTLA L AA GDLVG+RLT GL LE I T D +G RL Sbjct 121 DRGIPLELAGESGVVLLAPGTLAALKAAEGDLVGLRLTDQGLALETIETV-VDADIGNRL 179 Query 188 AELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGGFNFDAW 247 AE++ DEP F AA T C +DP F E APL E++ + GL + D ++AP GF+F W Sbjct 180 AEVLPGDEPTFVDAAALTLCAEDPTVFVEATAPLSEVIREAGLAYSDGFIAPAGFDFGRW 239 Query 248 RFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATAAETATET 307 RFE C A H LDP+DAVAL TLI E +++ D D LP Sbjct 240 RFETACHRSADTHGLDPDDAVALQTLIMALEQLTV-----DADSLP-------------- 280 Query 308 GSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPRAARVAVR 367 LL GAAL +P++A+ LV ETV G +L LTE LE +VPR AR AVR Sbjct 281 -------LLRRAGAALENPVVADALVEETVDAGRGSPESLSRLTEALEAQVPRPARAAVR 333 Query 368 WLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLALLRRAGTE 427 WLRA AL+R GD+ AAERELLAAE+MDTEWPL L+DLA IASDRGDAER LALLRRAG Sbjct 334 WLRATALERAGDIAAAERELLAAETMDTEWPLTLVDLAHIASDRGDAERALALLRRAGFP 393 Query 428 PDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWLYAKASQH 487 PDHP V+ L+R+ PR DLGRNE CWCGSGRKYKKCHLG E L L ER WLY+KA+QH Sbjct 394 PDHPNVQFLQRYLVAPRPDLGRNEPCWCGSGRKYKKCHLGNEQLSLEERAAWLYSKAAQH 453 Query 488 ALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVRGSLL 547 W G+L E++ ER RYAD D DA+A A++DPLV+DA+L EG AFA+FL VRG LL Sbjct 454 VSETHWHGMLLELALERSRYAD-DLHDAIAEAMSDPLVMDALLHEGDAFADFLRVRGPLL 512 Query 548 PDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICA 607 PDDER LAEQWLLV+RSVFEV+ V+PGE V VRDVRTGD HEV ER ASR+++ G+L+CA Sbjct 513 PDDERALAEQWLLVDRSVFEVQAVRPGETVTVRDVRTGDRHEVRERLASREVKPGELLCA 572 Query 608 RPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLVNTEGDSL 667 R +P G M FFGGIE V+L ER LIELLD PD VTLVA L+RRFAPPTL NTEGD L Sbjct 573 RVLPTGSIMQFFGGIERVSLGERDELIELLDSRPDEVTLVAALTRRFAPPTLTNTEGDLL 632 Query 668 AICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLDGDTLRVE 727 +CEA+VR DPA ALD VY R D ++PP W EHV G ++RA+L LDGDTLRVE Sbjct 633 MVCEAAVRFADPA----ALDAVYVRAD-DDPPHWFEHVP--GKPQIRASLKLDGDTLRVE 685 Query 728 TNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRN-TREAAALAEQMPVTGAGAPDPDSPEL 786 TNSE RMDRVLA L RLDPAMTVL++ RRP+ T + L E PD PE+ Sbjct 686 TNSEERMDRVLAELGRLDPAMTVLEESRRPISEVTPPSRELLE-----------PDDPEM 734 Query 787 AAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGARGGMDA 846 AA+EEF+RDYET WLD+ IPAL+G TPRQAADDPTRR DLIKLLD+FPA GM+A Sbjct 735 IAAMEEFMRDYETRWLDESIPALNGLTPRQAADDPTRRGDLIKLLDSFPA---TERGMNA 791 Query 847 DRLRTALGL 855 DRLR ALGL Sbjct 792 DRLRAALGL 800 >gi|240169386|ref|ZP_04748045.1| hypothetical protein MkanA1_08738 [Mycobacterium kansasii ATCC 12478] Length=665 Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/654 (67%), Positives = 505/654 (78%), Gaps = 8/654 (1%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 VA+A ++ +ARIL EHGPLS +DIA RLL+ V DPD ++ E + ARQLVD++ Sbjct 4 VADAVGESETLARILTEHGPLSAEDIAARLLERDVTDPDTLVDRFLDELDCAARQLVDEK 63 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLP +LAGRVFTHRL A+E +D L VTPDLDP+T LCEHE+Y RLADGS A VLA Sbjct 64 WVWLPAVLAGRVFTHRLCAEELAYDALNVTPDLDPVTALCEHEQYQRLADGSPAGAVLAD 123 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 +D+ELLERRGIPDEA+DP G LLL PGTL LG + GDL GVRLT GLV+ER+ + Sbjct 124 FDDELLERRGIPDEAVDPAGTLLLAPGTLGALGLSEGDLAGVRLTEEGLVVERVTEVASA 183 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 VGARLA +D +P +F AAVWT C ++P FTEP+ PL EI+D HGL +WLAPG Sbjct 184 QGVGARLAATLDAGQPTYFDAAVWTVCAEEPQLFTEPLPPLSEIVDDHGLARHGEWLAPG 243 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GF+F AW F+ CE LA RH+LDPNDAV LY L+ LH+ +++LL+A P + LA A Sbjct 244 GFDFGAWHFKRGCEALAERHELDPNDAVTLYVLVTLHDQIAVLLDAGVA---PEEALAAA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 E A TG D +DL+G+ GAALADPLLAELLVAET+GTD G A LGL E+LE KVPR Sbjct 301 TEGA--TGPD--MDLVGEFGAALADPLLAELLVAETIGTDRVGTAGLGLFAEVLESKVPR 356 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 ARVA RWLRAVAL+R+GD+EAAEREL+AAE+M+ +WPLPL DLARIASDRGD ERGL L Sbjct 357 PARVACRWLRAVALERLGDIEAAERELVAAETMNPDWPLPLFDLARIASDRGDVERGLTL 416 Query 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 LRRAG EPD+PLV LLE +RA+PRRD+GRN+ CWCGSGRKYKKCHLGRE LPL +R WL Sbjct 417 LRRAGAEPDYPLVELLEMYRAEPRRDVGRNDLCWCGSGRKYKKCHLGREQLPLDDRARWL 476 Query 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 YAKA QHAL W LL EV+ ER R+A DD DAL AL DPLV+DAVLFEGGAF EFL Sbjct 477 YAKAIQHALVSGWNDLLIEVADERSRHA-GDDPDALNTALGDPLVIDAVLFEGGAFEEFL 535 Query 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 E+RGSLLPDDERLLA+QWL V RSVFEVE VQ G V VRD+RTGDTH+V E AA RQL+ Sbjct 536 EIRGSLLPDDERLLAQQWLSVPRSVFEVERVQRGYSVTVRDLRTGDTHQVREHAAGRQLK 595 Query 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRF 654 GQL+CAR +PAGDTM FFGG+EPVALHER LI LLD EPD VTLVA LS RF Sbjct 596 TGQLVCARALPAGDTMRFFGGVEPVALHERDRLINLLDTEPDAVTLVAYLSLRF 649 >gi|289568551|ref|ZP_06448778.1| hypothetical protein TBJG_01055 [Mycobacterium tuberculosis T17] gi|289542305|gb|EFD45953.1| hypothetical protein TBJG_01055 [Mycobacterium tuberculosis T17] Length=468 Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/431 (99%), Positives = 429/431 (99%), Gaps = 0/431 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL Sbjct 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 Query 421 LRRAGTEPDHP 431 LRRAGTEP P Sbjct 421 LRRAGTEPRPP 431 >gi|298524103|ref|ZP_07011512.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298493897|gb|EFI29191.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=468 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/388 (99%), Positives = 387/388 (99%), Gaps = 0/388 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEY RLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYCRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 Query 361 AARVAVRWLRAVALDRIGDVEAAERELL 388 AARVAVRWLRAVALDRIGDVEAAERELL Sbjct 361 AARVAVRWLRAVALDRIGDVEAAERELL 388 >gi|289749112|ref|ZP_06508490.1| hypothetical protein TBDG_03748 [Mycobacterium tuberculosis T92] gi|289689699|gb|EFD57128.1| hypothetical protein TBDG_03748 [Mycobacterium tuberculosis T92] Length=378 Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/370 (99%), Positives = 370/370 (100%), Gaps = 0/370 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 +AEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 1 MAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR Sbjct 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 Query 361 AARVAVRWLR 370 AARVAVRWLR Sbjct 361 AARVAVRWLR 370 >gi|289760736|ref|ZP_06520114.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289708242|gb|EFD72258.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=331 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/331 (99%), Positives = 331/331 (100%), Gaps = 0/331 (0%) Query 525 VLDAVLFEGGAFAEFLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRT 584 +LDAVLFEGGAFAEFLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRT Sbjct 1 MLDAVLFEGGAFAEFLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRT 60 Query 585 GDTHEVHERAASRQLRAGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPV 644 GDTHEVHERAASRQLRAGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPV Sbjct 61 GDTHEVHERAASRQLRAGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDEPDPV 120 Query 645 TLVAQLSRRFAPPTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEH 704 TLVAQLSRRFAPPTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEH Sbjct 121 TLVAQLSRRFAPPTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEH 180 Query 705 VTNDGMLRVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREA 764 VTNDGMLRVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREA Sbjct 181 VTNDGMLRVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREA 240 Query 765 AALAEQMPVTGAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRR 824 AALAEQMPVTGAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRR Sbjct 241 AALAEQMPVTGAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRR 300 Query 825 ADLIKLLDTFPAGAGARGGMDADRLRTALGL 855 ADLIKLLDTFPAGAGARGGMDADRLRTALGL Sbjct 301 ADLIKLLDTFPAGAGARGGMDADRLRTALGL 331 >gi|306781550|ref|ZP_07419887.1| hypothetical protein TMBG_03471 [Mycobacterium tuberculosis SUMu002] gi|308325711|gb|EFP14562.1| hypothetical protein TMBG_03471 [Mycobacterium tuberculosis SUMu002] Length=328 Score = 630 bits (1625), Expect = 3e-178, Method: Compositional matrix adjust. Identities = 325/325 (100%), Positives = 325/325 (100%), Gaps = 0/325 (0%) Query 1 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 60 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR Sbjct 4 VAEAFDATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDR 63 Query 61 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 120 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG Sbjct 64 WVWLPTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAG 123 Query 121 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 180 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD Sbjct 124 YDEELLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGAD 183 Query 181 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 240 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG Sbjct 184 TSVGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPG 243 Query 241 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA Sbjct 244 GFNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATA 303 Query 301 AETATETGSDSLVDLLGDIGAALAD 325 AETATETGSDSLVDLLGDIGAALAD Sbjct 304 AETATETGSDSLVDLLGDIGAALAD 328 >gi|333989271|ref|YP_004521885.1| hypothetical protein JDM601_0631 [Mycobacterium sp. JDM601] gi|333485239|gb|AEF34631.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=508 Score = 514 bits (1324), Expect = 3e-143, Method: Compositional matrix adjust. Identities = 285/482 (60%), Positives = 337/482 (70%), Gaps = 4/482 (0%) Query 6 DATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDRWVWLP 65 DA +A IL EHGP S+DDIA RL ++G+ADPD V+ L E PAR L D RWVWLP Sbjct 6 DAAPTLAAILTEHGPASQDDIADRLHEAGIADPDTVIDELLDEFSCPARPLPDGRWVWLP 65 Query 66 TLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEEL 125 +LAGRVFTHRL A+E HD+L V+PDLDPIT LC+ ++Y LADGS +VL YD+EL Sbjct 66 AVLAGRVFTHRLTAEELTHDLLAVSPDLDPITELCD-DDYPELADGSPVSLVLPRYDDEL 124 Query 126 LERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGADTSVGA 185 LE RGIP E +D GALLL PGTLA LG AAGDL+G+RLT G+ LE + TA D ++G Sbjct 125 LEERGIPLELVDEPGALLLAPGTLAGLGLAAGDLLGMRLTDKGIALEPV-TATMDPTLGD 183 Query 186 RLAELVDPDE-PAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGGFNF 244 RLA LVD DE P+ F + VW AC DPA F P+APL EI D HGL DWLAP GF+F Sbjct 184 RLAALVDVDESPSRFASVVWAACAVDPALFNTPLAPLGEIADAHGLARSGDWLAPAGFDF 243 Query 245 DAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATAAETA 304 D WRFE +C LA + LD +DA L TL+++H M+ + + P + A A T Sbjct 244 DRWRFERKCARLADEYGLDDDDAFVLTTLVEIHGQMARIFDMA-PGAEDDEEGAADAPTD 302 Query 305 TETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPRAARV 364 D+LG++GAALA+P+LA L+ E GAAALG+L E L+PKVPR+ARV Sbjct 303 AWPADGPYADILGELGAALANPVLALSLMEEATHEGRRGAAALGILAESLQPKVPRSARV 362 Query 365 AVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLALLRRA 424 A WL+A+A + +GDV RELLAAES D +WPL LL LARIASDRGDAE GL LLRRA Sbjct 363 ATHWLQAMACEGLGDVAGCARELLAAESSDPDWPLALLSLARIASDRGDAEAGLGLLRRA 422 Query 425 GTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWLYAKA 484 G DHPLVRLLE+HRAQPR D+GRNE CWCGSGRKYKKCHLG E L L ERV WLYAKA Sbjct 423 GVGSDHPLVRLLEQHRAQPRTDVGRNEPCWCGSGRKYKKCHLGNEQLSLTERVRWLYAKA 482 Query 485 SQ 486 Q Sbjct 483 HQ 484 >gi|308374057|ref|ZP_07667700.1| hypothetical protein TMFG_03279 [Mycobacterium tuberculosis SUMu006] gi|308343212|gb|EFP32063.1| hypothetical protein TMFG_03279 [Mycobacterium tuberculosis SUMu006] Length=239 Score = 467 bits (1202), Expect = 4e-129, Method: Compositional matrix adjust. Identities = 238/239 (99%), Positives = 239/239 (100%), Gaps = 0/239 (0%) Query 617 VFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLVNTEGDSLAICEASVRV 676 +FFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLVNTEGDSLAICEASVRV Sbjct 1 MFFGGIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLVNTEGDSLAICEASVRV 60 Query 677 DDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLDGDTLRVETNSEPRMDR 736 DDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLDGDTLRVETNSEPRMDR Sbjct 61 DDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVLDGDTLRVETNSEPRMDR 120 Query 737 VLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPDPDSPELAAALEEFIRD 796 VLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPDPDSPELAAALEEFIRD Sbjct 121 VLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPDPDSPELAAALEEFIRD 180 Query 797 YETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGARGGMDADRLRTALGL 855 YETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGARGGMDADRLRTALGL Sbjct 181 YETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGARGGMDADRLRTALGL 239 >gi|226359545|ref|YP_002777323.1| hypothetical protein ROP_01310 [Rhodococcus opacus B4] gi|226238030|dbj|BAH48378.1| hypothetical protein [Rhodococcus opacus B4] Length=832 Score = 458 bits (1179), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 347/859 (41%), Positives = 421/859 (50%), Gaps = 55/859 (6%) Query 9 QAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPAR----QLVDDRWVWL 64 +A +L EHGPL D+ ARRL VA+ L + TE+ L D R L Sbjct 17 EAAMSLLREHGPLHPDEWARRL----VAEGHGYLADMEELTEYIGHPRLGYLADGRSAAL 72 Query 65 PTLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEE 124 LL GRV THRL E +L PDL P+ + + RI+ D++ Sbjct 73 DALLDGRVLTHRLTEMEISSGILDANPDLMPLLPFDDDDPAA-----GGLRILFRDLDDD 127 Query 125 LLERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGADTS-V 183 + + RG D ALLLEP L G GDLV + T L L A + Sbjct 128 VFDERGALDADWPADAALLLEPDALT--GLRPGDLVALTFTGGVLRLTAAENPPAPAPDL 185 Query 184 GARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGGFN 243 A L LV D P +W DDP+ T P PL E++ G + D +A GF+ Sbjct 186 TAALTGLVTEDRPEPLDGVIWQLMADDPSLLTAPTTPLGELITAAGYVCDGDDIAAAGFD 245 Query 244 FDAWRFENRCELLAFRHDL--DPNDAV-ALYTLIKLHETMSLLLEATDPDELPRDVLATA 300 F A R + +A H L D DAV A LI + LE T D+ V A A Sbjct 246 FAAHRGKAHMATVAAAHHLTDDQTDAVLAFLALIGV-------LERTPDDQRAAAVDAVA 298 Query 301 AETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPR 360 A GD A LA P A E T G L +L + PR Sbjct 299 AN-------------FGDRFAGLAHPNAARAAFGEAYATAHAGTDTLRSAAAVLRDRGPR 345 Query 361 AARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLAL 420 WL A + G AER A ++D W L LAR ASDRGDA R + L Sbjct 346 RIAPTAHWLAGKAAELDGWTADAERHYERALAVDPNWDEALEALARFASDRGDAVRAIGL 405 Query 421 LRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWL 480 L R P+ LL+ R DLGRN+ CWCGSGRKYK CHLG L +R WL Sbjct 406 LDRVEGAYREPMYDLLQSFLPVDRPDLGRNDRCWCGSGRKYKACHLGTAEHSLEQRAGWL 465 Query 481 YAKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFL 540 Y KA A +W LL +S + R +DD AL AL DPLV D V+FE GAFA F+ Sbjct 466 YQKAGSFAQGIEWRPLL--LSLAQIRSVHNDDPFALYHALDDPLVADVVMFECGAFARFV 523 Query 541 EVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLR 600 RG LLP DE LLA+QW L ERSV EVE V+PGEG+ +RDVRTGD HEV ER ASRQLR Sbjct 524 AERGVLLPADELLLAQQWSLTERSVHEVETVRPGEGLTLRDVRTGDRHEVTERTASRQLR 583 Query 601 AGQLICARPVPAGDTMVFFGGIEPVALHERAVLIELLD-DEPDPVTLVAQLSRRFAPPTL 659 G CAR VPAG T FGGIEP+A +R LIELLD + DP LV LS RFAPP L Sbjct 584 VGDFFCARVVPAGSTTQIFGGIEPIAPGQRGQLIELLDSNATDPEELVEFLSARFAPPRL 643 Query 660 VNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATLVL 719 + +G + C A + D GI+ L + D + RW N + + T Sbjct 644 ITPDGHPMVACRAVFEIADTTGIRRKLSRRFGAADND---RWTWTEQNSVLGVLTLTRST 700 Query 720 DGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAP 779 D L E +EPR + ++ + DP + + R P AA L Q GA Sbjct 701 DRWELEAEAMNEPRFESLIDAVRAADPGGRLREQTRTP------AAELIAQTQDNGAHPH 754 Query 780 ---DPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFPA 836 DP+ PE+AA L+E IR YE WLD+ IPAL GHTPRQ A DPTRR +LI+LLD+FP Sbjct 755 QPVDPEDPEIAATLDEHIRRYEQQWLDEAIPALGGHTPRQCAADPTRRDELIRLLDSFPQ 814 Query 837 GAGARGGMDADRLRTALGL 855 G M A RLR ALGL Sbjct 815 -QDRPGAMSAHRLREALGL 832 >gi|226365319|ref|YP_002783102.1| hypothetical protein ROP_59100 [Rhodococcus opacus B4] gi|226243809|dbj|BAH54157.1| hypothetical protein [Rhodococcus opacus B4] Length=650 Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 251/653 (39%), Positives = 325/653 (50%), Gaps = 50/653 (7%) Query 14 ILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLV-DDRWVWLPTLLAGRV 72 +L E GPLS+ ++ L D+G D ++ + E + P ++ DDR V L LLAGRV Sbjct 35 LLRERGPLSDRELTVALADAGWGGVDELIEYVE-EFDAPLLGILPDDRKVALDVLLAGRV 93 Query 73 FTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEELLE----- 127 THRL A+E D+ V PD +YG L ++ + G++ L+ Sbjct 94 LTHRLTAEEIAADV--VEPD-----------DYGSLLHLASGEPDVDGFEVVFLDDEANE 140 Query 128 --RRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGADTSVGA 185 RG L L GTLA + GDL+ + T +G+ L+ +G AD A Sbjct 141 LAARGGESANWSDDEVLALPRGTLAH--RSPGDLLAMIATDSGVRLDFVGGPVADAPELA 198 Query 186 RLAELVDPDEPAF-FPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGGFNF 244 + VW VDDPAAFT P PL +I++ G +AP GF+F Sbjct 199 LRLTRRLRESVVIDLEEEVWHLLVDDPAAFTVPGLPLADIVEAAGFDRSGQLVAPRGFDF 258 Query 245 DAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATAAETA 304 +A+ + + + + A+A+ TL+ L ATA E Sbjct 259 EAYGRDLMVGVYGDELGVPRDAALAVATLVSL---------------------ATALEED 297 Query 305 TETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPRAARV 364 E + ++ ALADP + E+ E D L L + L PR + Sbjct 298 GEEDIQATFFARPELYTALADPAVMEVAAQELFDLDIDPEVLL-LTAQRLLASGPREVKA 356 Query 365 AVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLALLRRA 424 A W+ A + G AE A +D + L L DLAR ASDRGDA RGL+LL R Sbjct 357 AASWIAGRATEMQGFPTQAEDHYGHALVLDGAFDLALFDLARFASDRGDAVRGLSLLNRM 416 Query 425 GTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWLYAKA 484 PL +LE + PR LGRN CWCGSGRKYK CHLG+ L+ER WLY KA Sbjct 417 AAGDAEPLHAVLEHFQPTPRPGLGRNHPCWCGSGRKYKTCHLGKGDHALSERAAWLYQKA 476 Query 485 SQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVRG 544 HA W + E + R + D AL AL DPLV D LFEGGAFA+F+E RG Sbjct 477 KLHAQELGWRDQIVEYAEIRSEFWAGDA--ALFQALEDPLVTDVALFEGGAFADFVECRG 534 Query 545 SLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQL 604 LLP DE LA QW VERS+ EVE V+PGEG+ +RD+RTGD ++ E ASR L G + Sbjct 535 DLLPPDEFALARQWQEVERSLHEVEEVRPGEGLTLRDLRTGDRRDIREVTASRMLHVGNM 594 Query 605 ICARPVPAGDTMVFFGGIEPVALHERAVLIELLDDE-PDPVTLVAQLSRRFAP 656 ICAR VPAGDT FGGIEP++ R L+ LDDE DP LV LS RFAP Sbjct 595 ICARVVPAGDTWQIFGGIEPISQDRRPSLLAALDDETTDPADLVEILSERFAP 647 >gi|325676580|ref|ZP_08156258.1| tetratricopeptide repeat family protein [Rhodococcus equi ATCC 33707] gi|325552758|gb|EGD22442.1| tetratricopeptide repeat family protein [Rhodococcus equi ATCC 33707] Length=623 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 231/624 (38%), Positives = 310/624 (50%), Gaps = 40/624 (6%) Query 6 DATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDRWVWLP 65 D T A L GP + +D A+RL+D+G + + L L D R L Sbjct 9 DLTTAAIADLRASGPSTGEDWAQRLVDAGHGSLPEMTEFVELLDHPSVVLLADGRNAVLD 68 Query 66 TLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEEL 125 TLL GRVFTHRL E +L PDL P+ GR AD S R++ YD + Sbjct 69 TLLEGRVFTHRLSGGEIESGLLHADPDLAPVVM----SALGR-ADESV-RVLFLDYDADE 122 Query 126 LERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGADTS--- 182 L GI DE G LL GT A G ++GDL+ V + A G + + +AG D + Sbjct 123 LAALGIADEDFPDGPVLLF--GTEALQGFSSGDLIAVTVGAGGSL--ELSSAGGDVADVP 178 Query 183 -VGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGG 241 + RL +V D W DD A P PL E+++ G E D++A G Sbjct 179 DMADRLDRIVGADNADNLETVAWQLLADDDALCATPTMPLGELIEAAGYECEGDYIAARG 238 Query 242 FNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATAA 301 F+FDA ++A H+L P++A A+ + ++L + D +LP +VLA Sbjct 239 FDFDAHHLAAHIAMVAREHELHPDEASAVVSFVQLVGIVH-----DDELDLP-EVLARVC 292 Query 302 ETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPRA 361 E A D A L DP A ++ + AL + PR Sbjct 293 EDA-------------DSVAGLEDPAAAAAVLDLVNAVEDDYIPALYTTASAVVGAGPRR 339 Query 362 ARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLALL 421 A+ + WL +A D +GDV AER A +MD EW L +LA+IASDRGDA+RGL+LL Sbjct 340 AKASGHWLAGMAADTLGDVLEAERHFADAAAMDEEWTPALFELAQIASDRGDAQRGLSLL 399 Query 422 RRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWLY 481 R D L +L R +LGRN+ CWCGSGRKYK CHLG+ L +R WLY Sbjct 400 GRIDGGQDERLYDVLTRFAPAEHPELGRNDKCWCGSGRKYKVCHLGKADATLDDRASWLY 459 Query 482 AKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLE 541 KA+ +A S L+ + + R A DDEDA+A A +PLV+D LFEGG F F+ Sbjct 460 EKATLYAQSTVLFDLV--LGLAQRRAAHWDDEDAVARAFDEPLVIDTALFEGGLFRLFVA 517 Query 542 VRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRA 601 RG LLP DER LA++WL V RSV EV V G +RD+ T ++ V + A + Sbjct 518 RRGVLLPADERELADRWLRVRRSVHEVVSVD-GSTATLRDLATDESATVDDGARA----V 572 Query 602 GQLICARPVPAGDTMVFFGGIEPV 625 G+L+CAR VP G+ GG+E V Sbjct 573 GELLCARVVPTGERTQILGGVEQV 596 >gi|312138728|ref|YP_004006064.1| hypothetical protein REQ_12860 [Rhodococcus equi 103S] gi|311888067|emb|CBH47379.1| hypothetical protein REQ_12860 [Rhodococcus equi 103S] Length=623 Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 231/624 (38%), Positives = 311/624 (50%), Gaps = 40/624 (6%) Query 6 DATQAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDRWVWLP 65 D T A L GP + +D A+RL+D+G + + L L D R L Sbjct 9 DLTTAAIADLRASGPSTGEDWAQRLVDAGHGSLPEMTEFVELLDHPSVVLLADGRNAVLD 68 Query 66 TLLAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEEL 125 TLL GRVFTHRL E +L PDL P+ GR AD S R++ YD + Sbjct 69 TLLEGRVFTHRLSGGEIESGLLHADPDLAPVVM----SALGR-ADESV-RVLFPDYDADE 122 Query 126 LERRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGADTS--- 182 L GI DE G LL GT A G ++GDL+ V + A G + + +AG D + Sbjct 123 LAALGIADEHFPDGPVLLF--GTEALQGFSSGDLIAVTVGAGGSL--ELSSAGGDVADVP 178 Query 183 -VGARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGG 241 + RL +V D W DD A P PL E+++ G E D++A G Sbjct 179 DMADRLDRIVGADNADNLETVAWQLLADDDALCATPTMPLGELIEAAGYECEGDYIAARG 238 Query 242 FNFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATAA 301 F+FDA ++A H+L P++A A+ + ++L + + D +LP +VLA Sbjct 239 FDFDAHHLAAHIAMVAREHELHPDEASAVVSFVQL-----VGIVHDDELDLP-EVLARVG 292 Query 302 ETATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPRA 361 E A D A L DP A ++ + AL + PR Sbjct 293 EDA-------------DSVAGLEDPAAAAAVLDLVNAVEDDYIPALYTTASAVVGAGPRR 339 Query 362 ARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLALL 421 A+ + WL +A D +GDV AER A +MD EW L +LA+IASDRGDA+RGL+LL Sbjct 340 AKASGHWLAGMAADTLGDVLEAERHFADAAAMDEEWTPALFELAQIASDRGDAQRGLSLL 399 Query 422 RRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWLY 481 R D L +L R +LGRN+ CWCGSGRKYK CHLG+ L +R WLY Sbjct 400 GRIDGGRDERLYDVLTRFAPAEHPELGRNDKCWCGSGRKYKVCHLGKADATLDDRASWLY 459 Query 482 AKASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLE 541 KA+ +A S L+ + + R A DDEDA+A A +PLV+D LFEGG F F+ Sbjct 460 EKATLYAQSTVLFDLV--LGLAQRRAAHWDDEDAVARAFDEPLVIDTALFEGGLFRLFVA 517 Query 542 VRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRA 601 RG LLP DER LA++WL V RSV EV V G +RD+ T ++ V + A + Sbjct 518 RRGVLLPADERELADRWLRVRRSVHEVVSVD-GSTATLRDLATDESATVDDGARA----V 572 Query 602 GQLICARPVPAGDTMVFFGGIEPV 625 G+L+CAR VP G+ GG+E V Sbjct 573 GELLCARVVPTGERTQILGGVEQV 596 >gi|226308702|ref|YP_002768662.1| hypothetical protein RER_52150 [Rhodococcus erythropolis PR4] gi|226187819|dbj|BAH35923.1| hypothetical protein RER_52150 [Rhodococcus erythropolis PR4] Length=640 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 217/653 (34%), Positives = 325/653 (50%), Gaps = 36/653 (5%) Query 9 QAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDRWVWLPTLL 68 +A +L EHGP + D L D+G D + + + L ++R+ L TL Sbjct 13 EAAMELLREHGPQTAADWGTLLADAGHGTADDMAEFVEYVEDPLLGYLSEERYAALDTLF 72 Query 69 AGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEELLER 128 RV THRL E +L PDL + + ++ + +V G D++LL Sbjct 73 EHRVLTHRLTEAEIKSGVLDANPDLMMLRVFLDRDD----DEIHGISVVHRGIDDDLLAD 128 Query 129 RGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTA-----GADTSV 183 RGI D LL+ TLA +AGDL+G+ + L L I G S+ Sbjct 129 RGIEDPEFPHDEGFLLDTDTLAE--CSAGDLIGLFVADRELTLCTIPEVLDPAPGFGESL 186 Query 184 GARLAELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGGFN 243 G LA++ A VW +D+P+ F +P APL E+L+ G + D++A GF+ Sbjct 187 GTVLADI----GADTLDAIVWQLMLDEPSLFRQPTAPLGEMLEAAGYVRDGDYVAVDGFD 242 Query 244 FDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATAAET 303 F+A+ NR +L R +L P +A ++ + + M+ EA + ++ A Sbjct 243 FEAYHLANRARMLEVRENLHPEEAASVIAFVDV--VMAAKAEAVED-------VSDWARK 293 Query 304 ATETGSDSLVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPRAAR 363 + + + AA A LL+EL ++V L + L K R + Sbjct 294 QIKEDPQTFAGIAEPPAAAAALELLSELDDHDSV---------LHSVATALAEKGSRRVK 344 Query 364 VAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLALLRR 423 A WL A DR+G + AE A +D +W + DLA +A+DR D R LALL R Sbjct 345 PAAHWLAGKASDRLGKILVAEASYETAHDLDPDWTPAIFDLALLAADRSDVTRALALLGR 404 Query 424 AGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWLYAK 483 L +L+R+ +LGRN+ CWCGSGRK+K CHLG+ + +R +WLY K Sbjct 405 IEGGESEVLHEVLQRYAPAEHPELGRNDKCWCGSGRKFKVCHLGKSEVTFDDRANWLYVK 464 Query 484 ASQHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVR 543 A + + ++ + +++ R +S E+AL A+ L +DA LF+ G FA F+E R Sbjct 465 AQLFSRTPEYFDAVFDLALIRAEQFNS--EEALTLAVEGGLAVDAALFDAGIFAAFVERR 522 Query 544 GSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQ 603 G LLP DER LA+QWL + RSV++V +PG+ V + DVR G +V + S L G Sbjct 523 GELLPTDERELADQWLSIPRSVYKVASTEPGQLVTLSDVRNGHLVKVTDEWGSVNLEPGT 582 Query 604 LICARPVPAGDTMVFFGGIEPVALHERAVLIELLDD-EPDPVTLVAQLSRRFA 655 L+CAR +PAG TM FGGIEP+A ++ LI+L++ + +P LV LSR A Sbjct 583 LVCARVLPAGSTMRTFGGIEPLAAEDKRELIQLIESVDTEPGQLVEFLSRGLA 635 >gi|229488928|ref|ZP_04382794.1| tetratricopeptide repeat family protein [Rhodococcus erythropolis SK121] gi|229324432|gb|EEN90187.1| tetratricopeptide repeat family protein [Rhodococcus erythropolis SK121] Length=636 Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 214/651 (33%), Positives = 313/651 (49%), Gaps = 32/651 (4%) Query 9 QAVARILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDRWVWLPTLL 68 +A +L EHGP + D L D+G D + + + L ++R+ L TL Sbjct 9 EAAMELLREHGPQTAADWGTLLADAGHGTADDMAEFVEYVEDPLLGYLSEERYAALDTLF 68 Query 69 AGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEELLER 128 RV THRL E +L PDL + + ++ + +V G D++LL Sbjct 69 EHRVLTHRLTEAEIESGVLDANPDLMMLRVFLDRDD----DEIHGISVVHRGIDDDLLAD 124 Query 129 RGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERI-GTAGADTSVGARL 187 RGI D LL+ TLA +AGDL+G+ + L L I G L Sbjct 125 RGIEDPEFPHDEGFLLDTDTLAE--CSAGDLIGLFVADRELTLCTIPEVLDPAPGFGEHL 182 Query 188 AELVDPDEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGGFNFDAW 247 A ++ A VW +D+P+ F +P APL E+L+ G + D++A GF+F+A+ Sbjct 183 ATVLADIGADTLDAIVWQLMLDEPSLFRQPTAPLGEMLEASGYVRDGDYVAVDGFDFEAY 242 Query 248 RFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATAAETATET 307 NR +L R +L P +A ++ + DV+ A E Sbjct 243 HLANRARMLEVRENLHPEEAASVIAFV--------------------DVVMAAKAEGVED 282 Query 308 GSDSLVDLLGDIGAALADPLLAELLVAETVGTDSG--GAAALGLLTEMLEPKVPRAARVA 365 SD + + A A A + L + L K R + A Sbjct 283 VSDWARKQIKEDPQAFAGLAEPPAAAAALELLSELDDHDSVLHSVATALAEKGSRRVKPA 342 Query 366 VRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLALLRRAG 425 WL A DR+G + AAE A +D +W + DLA +A+DR D R LALL R Sbjct 343 AHWLAGKASDRLGKILAAEASYETAHDLDPDWTPAIFDLALLAADRSDVTRALALLGRIE 402 Query 426 TEPDHPLVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWLYAKAS 485 L +L+R+ +LGRN+ CWCGSGRK+K CHLG+ + +R WLY KA Sbjct 403 GGESEVLHEVLQRYAPAEHPELGRNDKCWCGSGRKFKVCHLGKSEVTFDDRASWLYVKAQ 462 Query 486 QHALSGDWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVRGS 545 + + ++ + +++ R +S E+AL A+ L +DA LF+ G FA F+E RG Sbjct 463 LFSRTPEYFDAVFDLALIRAEQFNS--EEALTLAVEGGLAVDAALFDAGIFAAFVERRGE 520 Query 546 LLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLI 605 LLP DER LA+QWL + RSV++V +PG+ V + DVR G +V + S L G L+ Sbjct 521 LLPADERELADQWLSIPRSVYKVASTEPGQLVTLSDVRNGHLVKVTDEWGSLNLEPGTLV 580 Query 606 CARPVPAGDTMVFFGGIEPVALHERAVLIELLDDE-PDPVTLVAQLSRRFA 655 CAR +PAG TM FGGIEP+A+ ++ LI+L++ E +P LV LSR A Sbjct 581 CARVLPAGSTMRTFGGIEPLAVEDKKELIQLIESEDTEPGQLVEFLSRGLA 631 >gi|229489113|ref|ZP_04382979.1| tetratricopeptide repeat family protein [Rhodococcus erythropolis SK121] gi|229324617|gb|EEN90372.1| tetratricopeptide repeat family protein [Rhodococcus erythropolis SK121] Length=630 Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 210/628 (34%), Positives = 299/628 (48%), Gaps = 39/628 (6%) Query 14 ILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDRWVWLPTLLAGRVF 73 +L E GPLS ++ A L + G A A L +E L + ++V L T+L G VF Sbjct 19 VLREQGPLSLEEWATHLEEYGTATELA--DVLEYLSEPMLGYLPNGKYVALDTVLEGLVF 76 Query 74 THRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEELLERRGIPD 133 THRL E D+L +PDL+PI + D A R+ LA +E ER P Sbjct 77 THRLSEVEIASDILDASPDLEPILAFGD--------DDGAIRVALA--EEAASERGAAP- 125 Query 134 EAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGADTSVGARLAELVDP 193 ++L GTL A GDLVG+ + L R+ + + L EL + Sbjct 126 --CRSRRVVVLPAGTLGE--CADGDLVGLAVEDGTLAF-RLVEIEDEPDLAPALGELFEE 180 Query 194 DEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGGFNFDAWRFENRC 253 D + W ++DP+ FT PVAPL +I + G HE + LA GF+FDA+ + R Sbjct 181 DGVEALDSVCWQLLIEDPSLFTVPVAPLGQIFEVAGYEHERELLARRGFDFDAYDLQIRT 240 Query 254 ELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATAAETATETGSDSLV 313 L+A +DL ++AV+ + L + D D +A A DS V Sbjct 241 ALVASTYDLTHDEAVSAVAFVDLADRGYTDAVIADFD------IADWAHRHVSAAPDSFV 294 Query 314 DLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPRAARVAVRWLRAVA 373 L D GAA+A + D A L L L + PR+ R A WL A Sbjct 295 SL-ADPGAAVA------VFDLGFRNQDPVTDAILEALASELAERGPRSVRAAAHWLAGKA 347 Query 374 LDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLALLRRAGTEPDHPLV 433 +DR+G V AE A ++ W L +LA+ ASDRGDA R L+LL R + L Sbjct 348 VDRLGRVLEAEAHYEKALLAESGWGPALFELAQFASDRGDATRALSLLGRIDGGTEENLY 407 Query 434 RLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWLYAKASQHALSGDW 493 +L+ +LGRN+ CWCGSGRKYK CHLG+ + WLY KA A + ++ Sbjct 408 AVLQDFVPADHPELGRNDKCWCGSGRKYKVCHLGKADESVKADGRWLYKKACLFAFASEF 467 Query 494 TGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVRGSLLPDDERL 553 ++ + + +++ +AA + D LD LFEGG FAEFL R LLP+ E + Sbjct 468 VDIV--TGLDDLENENLSEDELIAATIFDGSALDVALFEGGIFAEFLARRSELLPEAEVV 525 Query 554 LAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICARPVPAG 613 A QWL + RSV+EV GV++ D + +T V A S + + G +I AR + A Sbjct 526 TAAQWLGIRRSVYEVIETSD-TGVVLLDRGSKETVTV---AHSVEGKPGDVISARVLTA- 580 Query 614 DTMVFFGGIEPVALHERAV-LIELLDDE 640 T F G+ +A +A ++E+L E Sbjct 581 PTGAFAVGVVVMATESQAARVLEVLASE 608 >gi|226308703|ref|YP_002768663.1| hypothetical protein RER_52160 [Rhodococcus erythropolis PR4] gi|226187820|dbj|BAH35924.1| hypothetical protein RER_52160 [Rhodococcus erythropolis PR4] Length=636 Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 202/629 (33%), Positives = 296/629 (48%), Gaps = 40/629 (6%) Query 14 ILAEHGPLSEDDIARRLLDSGVADPDAVLRALRLETEWPARQLVDDRWVWLPTLLAGRVF 73 +L E GPLS ++ A L + G A A L +E L + ++V L T+L G VF Sbjct 24 VLREQGPLSLEEWATHLEEYGTATELA--DVLEYLSEPMLGYLPNGKYVALDTVLEGLVF 81 Query 74 THRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEELLERRGIPD 133 THRL E D+L +PDL+PI + E+ A R+ LA EE RG D Sbjct 82 THRLSELEIASDILDASPDLEPILAFGDGED-------GAIRVALA---EEAAVERG--D 129 Query 134 EAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAGLVLERIGTAGADTSVGARLAELVDP 193 ++L GTL A GDL+G+ + L R+ + + L EL + Sbjct 130 APFRSRRVVVLPAGTLGE--CADGDLIGLAVEDGRLAF-RLVEIEDEPDLAPALGELFEE 186 Query 194 DEPAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGGFNFDAWRFENRC 253 D + W ++DP+ FT PVAPL EI + G HE + LA GF+FDA+ + R Sbjct 187 DGVEALDSVCWQLLLEDPSLFTVPVAPLGEIFEAAGYEHERELLARRGFDFDAYDLQIRT 246 Query 254 ELLAFRHDLDPNDAVALYTLIKLHE--TMSLLLEATDPDELPRDVLATAAETATETGSDS 311 L+A +DL ++AVA + L + ++ D + R ++ A + Sbjct 247 ALVASTYDLTHDEAVAAVAFVDLADRGYTDAVIADFDIVDWARRHVSAAPDFFVSLADPG 306 Query 312 LVDLLGDIGAALADPLLAELLVAETVGTDSGGAAALGLLTEMLEPKVPRAARVAVRWLRA 371 + D+G DP+ +L A L L + PR+ R A WL Sbjct 307 AAVAVFDLGFRNQDPVTDAILEA---------------LASELAERGPRSVRAAAHWLAG 351 Query 372 VALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGLALLRRAGTEPDHP 431 A+DR+G V AE A ++ W L +LA+ ASDRGDA R L+LL R + Sbjct 352 KAVDRLGRVLEAEAHYEKALLAESGWGPALFELAQFASDRGDATRALSLLGRIDGGSEEN 411 Query 432 LVRLLERHRAQPRRDLGRNEACWCGSGRKYKKCHLGREALPLAERVDWLYAKASQHALSG 491 L +L+ +LGRN+ CWCGSGRKYK CHLG+ + WLY KA A + Sbjct 412 LYAVLQDFVPADHPELGRNDKCWCGSGRKYKVCHLGKADESVKADGRWLYKKACLFAFAS 471 Query 492 DWTGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVRGSLLPDDE 551 ++ ++ + A+ +++ +AA + D LD LFEGG FA+FL R LLP+ E Sbjct 472 EFVDVV--TGLDDLENANLSEDELIAATIFDGSALDVALFEGGIFADFLARRSELLPEAE 529 Query 552 RLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICARPVP 611 + A QWL V RSV+EV GV++ D + +T V + G LI AR + Sbjct 530 VVTAAQWLGVRRSVYEVIETSD-TGVVLLDRVSEETVTVGHPVEGKP---GDLISARLLT 585 Query 612 AGDTMVFFGGIEPVALHERAVLIELLDDE 640 A + G + + + A ++E+L E Sbjct 586 APTGALAVGVVVMSSESQAARVLEVLASE 614 >gi|333989270|ref|YP_004521884.1| SecC motif-containing protein [Mycobacterium sp. JDM601] gi|333485238|gb|AEF34630.1| SecC motif-containing protein [Mycobacterium sp. JDM601] Length=174 Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/173 (60%), Positives = 123/173 (72%), Gaps = 2/173 (1%) Query 501 SYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVRGSLLPDDERLLAEQWLL 560 YER RY + + +D +AAA DPL +D +LFEGGAFAEFLE+RG LLPDDER LAEQWL Sbjct 4 GYERIRYFEDEVDDLVAAAKTDPLAIDTMLFEGGAFAEFLELRGELLPDDERQLAEQWLG 63 Query 561 VERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICARPVPAGDTMVFFG 620 V RSVFEVE V+PG GV VR+VRT + +V ER R L++GQLIC+R +P GD FFG Sbjct 64 VPRSVFEVEQVRPGHGVTVRNVRTDEVFDVTER--RRALQSGQLICSRALPTGDGFAFFG 121 Query 621 GIEPVALHERAVLIELLDDEPDPVTLVAQLSRRFAPPTLVNTEGDSLAICEAS 673 GI+PVA ER L+ LLDDEPDP+ LV LSR AP L + GD L A+ Sbjct 122 GIDPVAPQERDELLALLDDEPDPMELVGFLSRWLAPSELDDEYGDPLGTARAN 174 >gi|111022811|ref|YP_705783.1| hypothetical protein RHA1_ro05848 [Rhodococcus jostii RHA1] gi|110822341|gb|ABG97625.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=205 Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/94 (63%), Positives = 67/94 (72%), Gaps = 1/94 (1%) Query 564 SVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICARPVPAGDTMVFFGGIE 623 SV EVE V+PGEG+ +RD+RTGD H + ER ASRQL G ICAR VPAGDT FGGIE Sbjct 109 SVHEVEEVRPGEGLTLRDLRTGDLHAIRERTASRQLHVGNPICARVVPAGDTWQIFGGIE 168 Query 624 PVALHERAVLIELLDDE-PDPVTLVAQLSRRFAP 656 P+A RA L+E+LDDE DP LV LS RF P Sbjct 169 PIAPAHRAPLLEMLDDETTDPADLVVILSERFVP 202 >gi|111025241|ref|YP_707661.1| hypothetical protein RHA1_ro08459 [Rhodococcus jostii RHA1] gi|110824220|gb|ABG99503.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=190 Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/106 (47%), Positives = 66/106 (63%), Gaps = 3/106 (2%) Query 730 SEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPDPDSPELAAA 789 +EPR + ++ T+ DP + + R P E A A++ + DP PE+AAA Sbjct 2 NEPRFESLVDTVAAADPGARLREQTRTP---AAELIAQAQENSFRPSQPVDPTEPEIAAA 58 Query 790 LEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTFP 835 L+E IR YE WLD+ IPAL GHTPR+ A DPTRR DLI+LLD++P Sbjct 59 LDEHIRGYEQQWLDEAIPALGGHTPRECAADPTRRDDLIRLLDSYP 104 >gi|333920963|ref|YP_004494544.1| Tetratricopeptide repeat family protein [Amycolicicoccus subflavus DQS3-9A1] gi|333483184|gb|AEF41744.1| Tetratricopeptide repeat family protein [Amycolicicoccus subflavus DQS3-9A1] Length=538 Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 148/572 (26%), Positives = 225/572 (40%), Gaps = 109/572 (19%) Query 68 LAGRVFTHRLGADEAVHDMLGVTPDLDPITTLCEHEEYGRLADGSAARIVLAGYDEELLE 127 GRV TH L A E +D++ PD+ P E+G Sbjct 5 FGGRVPTHVLSAAEIRNDVVVTIPDIAPFM------EFG--------------------- 37 Query 128 RRGIPDEAIDPGGALLLEPGTLATLGAAAGDLVGVRLTAAG---LVLERIGTAGADTSVG 184 E + L L GTLA+ A GD+VGV + AG L ++R + Sbjct 38 ----GGECVT---HLYLRRGTLASF--APGDIVGVVTSHAGAEILRVDRDELTRPRADLR 88 Query 185 ARLAELVDPDE--PAFFPAAVWTACVDDPAAFTEPVAPLREILDQHGLTHEDDWLAPGGF 242 R+ V E PA + V C DDP P PL E+L ++ ++ + D + F Sbjct 89 TRVRRFVRDREGAPAGLHSLVAYLCRDDPEFCRAPSLPLSELLARYRVSWDGDRVGLDQF 148 Query 243 NFDAWRFENRCELLAFRHDLDPNDAVALYTLIKLHETMSLLLEATDPDELPRDVLATAAE 302 +F+ +R + R E L H +D ++A A+ T+ H + L +L DV+ AA+ Sbjct 149 DFEKYRNDERIEFLVAAHGMDVDEAAAVATM---HNRVRGALGGLGTADLHSDVIRCAAK 205 Query 303 TATETGSDSLVDLLGDIGAALAD----PLLAELLVAETVGTDSGGAAALGLLTEMLEPKV 358 + + G I L D + +LL G AA G+L + Sbjct 206 VESAGAA------YGMIAPWLHDEAQRSRILDLLTVSVAQAPHGQAA--GVLAWVCG--- 254 Query 359 PRAARVAVRWLRAVALDRIGDVEAAERELLAAESMDTEWPLPLLDLARIASDRGDAERGL 418 A+ + D I + REL EW + A +A DRG+ + Sbjct 255 ------AIAAAEGMTADVIAFAQRCIREL-------PEWGPGVEFAAEVAVDRGEFDEAQ 301 Query 419 ALLRRAGTEPDHPLVRLLERHRAQPRRDLGRNEACWCGS--GRKYKKCHLGREALPLAE- 475 +L PRR + + C S G ++ L A P++E Sbjct 302 RILT------------------GLPRR---KRKDCLPHSVLGALMRELEL---APPISEI 337 Query 476 -RVDWLYAKASQHALSGDWTGLLAEVSYERFRYADSD-----DEDALAAALADPLVLDAV 529 LY+K + S D + +A + + DSD D+ L+ +ADPLV+ V Sbjct 338 DTAKGLYSKLLRFTRS-DPSARMALIEVAQALRQDSDQVPLPDDSELSGLIADPLVVSCV 396 Query 530 LFEGGAFAEFLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHE 589 + EGG FL RG LLP +ER L E+W V R +F V+ V + ++ GD Sbjct 397 VVEGGMLHHFLRTRGGLLPSNERALLERWAGVRRRIFVVDAVGTSDNLLALTSLDGDVTR 456 Query 590 VHERAASR-QLRAGQLICARPVPA--GDTMVF 618 + A R ++ G + A VP G + VF Sbjct 457 CYVAAELRGKVVQGGSVLAWSVPLLRGASAVF 488 >gi|116624812|ref|YP_826968.1| SecC motif-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116227974|gb|ABJ86683.1| SEC-C motif domain protein [Candidatus Solibacter usitatus Ellin6076] Length=890 Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 126/458 (28%), Positives = 177/458 (39%), Gaps = 68/458 (14%) Query 447 LGRNEACWCGSGRKYKKCHLGREALPLAERVDWLYAKASQHALSGDWTGLLAEVSYERFR 506 +GRN+ CWCGSG+KYKKCHL A A A +S+ L LA E Sbjct 449 VGRNDPCWCGSGKKYKKCHL--RADEEAHLTGARPAASSEEPLPLRMLKGLARWHKE--- 503 Query 507 YADSDDEDALAAALADPLVLDAVLFEGGAFAEFL-------EVRGSLL------------ 547 AD + A+ D F+ AF +FL E R +L+ Sbjct 504 -ADRTRAQEMFFGTAEDKARDETEFD--AFVQFLLHDFRDAETRRTLIEHFLDEHGPRLS 560 Query 548 PDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICA 607 P D R +AE ++E+ V+ G G+ VRDV G T V + +SR+ Sbjct 561 PKD-RAVAESMRDSRFGLYEIFKVEKGRGIHVRDVFDGATFFVEDITSSRECVKDDCALL 619 Query 608 RPVPAGDTMVFFGGIEPVALHERAVLIELLDDE-----PDPVTLVAQLS----------- 651 R + G VA + E + E P S Sbjct 620 RVELRDGRYMLSGNGTAVARELLGEMKEFVSAESKAAGKSPAEFARANSALLRRHYLELH 679 Query 652 -RRFAPPTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPR-------WIE 703 RRF +VN+EGD L A V D + AL + + V EEP + W+E Sbjct 680 ARRFENLRVVNSEGDELEFWTAEYEVLDRPALILALRSLAELV--EEPSKDSAAHFGWME 737 Query 704 HVTNDGMLRVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTRE 763 +G V ++ + LR+ET S + L P + DR + + Sbjct 738 --PGEGPRSVHGSIEVTETRLRLETTSLKYRELGRGMLEYNAPRLLKHLGDRLTSVDDLK 795 Query 764 AAALAEQMPVTGAGAPDP-DSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPT 822 +AL +GA P P S E AA++++ + ++W + +PAL G TPRQA Sbjct 796 RSAL------SGARGPTPLPSEEERAAIQQYKAQHYSTWPNIALPALKGQTPRQAMRTNA 849 Query 823 RRADLIKLLDTF--PAGAGARGG---MDADRLRTALGL 855 R L LL AR G D + LR LGL Sbjct 850 GREALRNLLRDMEHQEARSARSGEVPYDFNILRRDLGL 887 >gi|253699919|ref|YP_003021108.1| SEC-C motif domain protein [Geobacter sp. M21] gi|251774769|gb|ACT17350.1| SEC-C motif domain protein [Geobacter sp. M21] Length=457 Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 115/445 (26%), Positives = 180/445 (41%), Gaps = 67/445 (15%) Query 447 LGRNEACWCGSGRKYKKCHLGREALPLAER----------VDWL---YAKASQHALSGDW 493 +GRN+ C CGSG+K+KKC + +E R +DWL Y+ A+ ++ Sbjct 5 IGRNDFCPCGSGKKFKKCCMVKEQDAEVRRREEKTAVPRTLDWLSERYSNEVAEAVHAEF 64 Query 494 TGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVRGSLLPDDERL 553 G L + +R D + + + + L+ D + EVRG + P E L Sbjct 65 YGGLEDEELDRLNELSRDFQQMIFINVGEWLINDGSI----------EVRGQVTPVKEIL 114 Query 554 L----------AEQWL--LVERSV--FEVEHVQPGEGVIVRDV-RTGDTH-EVHERAASR 597 L A WL L ERS+ +EV V PGEG+ + D+ R + V ER ASR Sbjct 115 LGPGGPLYTAAARNWLERLGERSLSLYEVVRVTPGEGIELIDLLRPAEPPVWVVERTASR 174 Query 598 QLRAGQLICARPVPAGDTMVFFGGIEPVALHE----RAVLIELL------DDEPDPVTLV 647 + + R V +V G P E R +++++ DD+ L Sbjct 175 TVVPHDIFGTRLVRTDSGLVMSGAAYPFTREEGLACRDHILQVMKMPGWTDDQFRDAALA 234 Query 648 --------AQLSRRFAPPTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPP 699 + ++ R P + ++ G+++ + RV D ++ L D V+G+ Sbjct 235 MITTSWLSSLVAERPMPKLVDSSTGNAIMLTTDRYRVKDWVALEKVLAAQPD-VEGDRSE 293 Query 700 RWIEHVTND-GMLRVRATLVLDGDT-LRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRP 757 W+ + M R A+ G T L V + D L R+ A V++ R Sbjct 294 GWVRFAQIEREMQRSLASCNPKGATSLEVFCRTVELADETRQWLERV--AAGVVEFKIRE 351 Query 758 LRNTREAAALAEQMPVTGAGAPDPDSPEL-AAALEEFIRDYETSWLDQPIPALDGHTPRQ 816 L + R A AG S EL L E +R+ +W ++PIPAL TPR Sbjct 352 LVDPRSEKA----RDFAAAGPKKEPSLELDNEVLNELMRNIYANWTEEPIPALGNKTPRA 407 Query 817 AADDPTRRADLIKLLDTFPAGAGAR 841 A R +I LL ++ R Sbjct 408 AIKTEKGRRAVIDLLHSYENNEARR 432 >gi|31790367|gb|AAP58624.1| hypothetical protein [uncultured Acidobacteria bacterium] Length=517 Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 127/516 (25%), Positives = 190/516 (37%), Gaps = 107/516 (20%) Query 433 VRLLERHRAQPRRDL------GRNEACWCGSGRKYKKCHLGREALPLAERVDWLYAKASQ 486 + L + QP + L GRN+ C CGSG+KYKKC L + E D+ Y + Q Sbjct 15 FQFLLSTQVQPSKCLSTMIKTGRNDPCPCGSGKKYKKCCLVPD-----EDSDFQYRRFRQ 69 Query 487 HALSGDWTGLLAEV------------------SYERFRYADSDDEDALAAALADPLVLDA 528 +GL+ ++ + + + D D L P L Sbjct 70 IH-----SGLIPKLMTFAFEIIEAEVVEEAWKEFNDYEAVEDFDPDGPLNVLFMPWFLFN 124 Query 529 VLFE----GGAFAE-------FLEVRGSLLPDDERLLAEQWLLVERSVFEVEHVQPGEGV 577 + E G E FL R + + DE +L + +++E V+PG G+ Sbjct 125 WIIELKPAGRTRVEETTIAELFLLDRKADISADEEMLLRSSIRCPYTLYEAVEVRPGVGM 184 Query 578 IVRDVRTGDTHEVHERAASRQLRAGQLI-CA------------------RPVPAGDTMVF 618 + D+ TH V E +AS L+ G++I CA RP G+ Sbjct 185 TLFDLLRRITHVVVEHSASETLKRGEIIYCATTQVAGFRSNVGMGPYALRPTAKGEVFAL 244 Query 619 FGGIEPVALHERAVLIELLDDEPDPVTL-VAQLSRRFAPPTLVNTEGDSLAICEASVRVD 677 I E L + E D L + L FAPP+L NT+GD + Sbjct 245 RKWIVNGIGSEEIRTEHLHEFEQDIRGLYLDTLKGMFAPPSLANTDGDPFLPQKLYF--- 301 Query 678 DPAGIQGALDGVYDRVDGEEPPRWIEHVTNDGMLRVRATL-------------------- 717 D A G+ G+E +E T D L V+A + Sbjct 302 DLKSADLAFQGLKSLAGGDEND-LLEQATLDNGLIVKAEIPWLGGSEEARSRLGGPVLLG 360 Query 718 --VLDGDTLRVETNSEPRM------------DRVLATLTRLDPAMTVLDDDRRPLRNTRE 763 +D + L VE NS+ R D T ++P + +++ Sbjct 361 LLKIDQERLIVEVNSKQRAELIRGLVEDRLGDTATYKTTLIEPMESRVNEMWNAAAAGSS 420 Query 764 AAALAEQMPVTGAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTR 823 +++ E T + D PE+ A +EE R + SW D P+PAL+ TPR+AA Sbjct 421 SSSDPEDRQHTDLSSYDQTQPEIMAMMEEVARQHWESWFDLPVPALNDMTPREAAQTEEG 480 Query 824 RADLIKLL----DTFPAGAGARGGMDADRLRTALGL 855 R L LL +T A D LR LG+ Sbjct 481 RELLESLLLFYENTQSDSAANVLNADIPALRRELGM 516 >gi|316932200|ref|YP_004107182.1| hypothetical protein Rpdx1_0815 [Rhodopseudomonas palustris DX-1] gi|315599914|gb|ADU42449.1| hypothetical protein Rpdx1_0815 [Rhodopseudomonas palustris DX-1] Length=472 Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 98/356 (28%), Positives = 139/356 (40%), Gaps = 93/356 (26%) Query 564 SVFEVEHVQPGEGVIVRD-VRTGDTHEVHERAASRQLRAGQLICARPVPAGDTMVFFGGI 622 S++EV V RD +R G+ V ER+A++ L+ I AR V G + GG+ Sbjct 106 SLYEVSDVVRDTSFRARDLIRGGEPVLVSERSATQTLKCWDRIAARIVQVGSKVQISGGV 165 Query 623 EPVALHERAVLI----------------------ELLDDEPDP------------VTLVA 648 P LI E DD+ D + LVA Sbjct 166 LPFEREVAEALITAFNQLGTLSIEEQRELAEEAGEEFDDDFDGEAALAALAPAERLRLVA 225 Query 649 QLSRRF------------APPTLVNTEGDSLAICEASVRVDDPAGIQG------------ 684 + F P L N EGD L +CE S R+ GI G Sbjct 226 PMFSSFWLIDAIDRIESARLPELRNAEGDELLLCEVSFRL--GTGITGDEIVRCLQARPE 283 Query 685 -------ALDGVYDRVDGEEPPR--------WIEHVTNDGMLRVRATLVLDGDTLRVETN 729 + V R G P E + +DGML++ L+L+ DTL + N Sbjct 284 FRPTSATSWSWVGQRERGGTAPDDDSPDETLMFETLQDDGMLQL-GELLLEDDTLVLCVN 342 Query 730 SEPRMDRVLATLTR-LDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAGAPDPDS---PE 785 S+ R DR A LT L P + + PL T A+ E + + A P PD E Sbjct 343 SQQRCDRGCALLTEILGPRVGL------PLIRTE---AVEEMLESSRAAMPTPDEIPEHE 393 Query 786 LAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRA---DLIKLLDTFPAGA 838 A + + + + LD+P+ LDG TPRQA +D + RA D +KL++ A + Sbjct 394 RRAVVHDHLERHYRETLDRPVAMLDGQTPRQAVEDESGRAKVVDWLKLIENRTAKS 449 >gi|338531363|ref|YP_004664697.1| hypothetical protein LILAB_08540 [Myxococcus fulvus HW-1] gi|337257459|gb|AEI63619.1| hypothetical protein LILAB_08540 [Myxococcus fulvus HW-1] Length=901 Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 84/306 (28%), Positives = 135/306 (45%), Gaps = 39/306 (12%) Query 554 LAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICARPVPAG 613 LA W SVFEVE V+ G+G+ +RD+ + EV ER+ + Q+ L+ +PA Sbjct 89 LAASWC----SVFEVEEVRLGQGLRLRDLVLDEVLEVRERSLTTQVTRHDLVAGWVMPAE 144 Query 614 DTMVFFGGIE--PVALHERAVL-----IELLDDEPDPVTLVAQLSRRFAP---------- 656 D + G I P +L + V+ L + V + +RR AP Sbjct 145 DHLELLGAIMAVPRSLRQHVVIAARQAFAALQPPAEDVAGRRRQARRLAPLLFTRVLELF 204 Query 657 ---PTLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEH----VTNDG 709 L+N +G+ L +C A V PA ++ L ++R E R+I V+ Sbjct 205 TADQPLLNADGEPLRLCTARFHVRHPAKVEARLRQ-HERFLREGEGRYIWEGPAPVSPVS 263 Query 710 MLRVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDR-RPLRNTREAAALA 768 V L + G++L ++T+S R+++ A L L A ++D P+++T+ A Sbjct 264 DPVVWGILTMKGESLTLDTHSAQRLEKGKAVLAELLGAEAEHEEDTLGPVQSTQGAPG-- 321 Query 769 EQMPVTGAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLI 828 P AGAP PELA L E I + L + +PA G + P RA ++ Sbjct 322 ---PSLPAGAP----PELADTLAELIAQRARAELVRGVPAWGGKSASDLVRTPEGRARVL 374 Query 829 KLLDTF 834 + L + Sbjct 375 EWLKDW 380 >gi|153006122|ref|YP_001380447.1| SecC motif-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029695|gb|ABS27463.1| SEC-C motif domain protein [Anaeromyxobacter sp. Fw109-5] Length=669 Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 115/431 (27%), Positives = 163/431 (38%), Gaps = 70/431 (16%) Query 449 RNEACWCGSGRKYKKCHL-------------GREALPLAERVDWLYAKASQHALSGDWTG 495 RN C CGSG+KYKKCHL G EA L + H L T Sbjct 206 RNAPCPCGSGKKYKKCHLAEEEAREAAARGTGLEAEEARAHARRLTERDPIHGLDERITA 265 Query 496 LLAEVSYERFRYADSDDED-ALAAALADPLVLDAVL------FEG----GAFAEFLEVRG 544 ++ R R+ D D AL A D A+L + G A +LE RG Sbjct 266 --DALALARRRWGREFDPDGALLAIGLDYQSTQALLGWSSGHYRGPDDRTALDLYLEERG 323 Query 545 SLLPDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQL 604 L + R L E S EV +PG + +RD+ G V E++ASR +R + Sbjct 324 RALDAEGRALVEAQRRAWFSYHEVVSAEPGRTITLRDLLAGGERTVEEKSASRTVRPRDV 383 Query 605 ICARPVPAGDTMVFFGG-IEPVALHE------------RAVLIELLDDEPDPVTLVAQLS 651 + AR + G + G + P+ E R ++ D+ T L Sbjct 384 LLARIIDLGSRAILAGCYLRPLPPREGDEARRRLRSAVRVRAAKVPADKLREATAGGTLF 443 Query 652 RRFAP----------PTLVNTEGDSLAIC--EASVRVDDPAGIQGAL----DGVYDR--V 693 R + P L NT+G L + V + AL D D V Sbjct 444 RIWLEIVDAADARPLPNLQNTDGADLILTVDRFDVAAAKAHEVVAALLDLPDARRDEGGV 503 Query 694 DGEEPPRWIEHVTNDGML--RVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVL 751 DG ++ G+L + +L+G LR+ETNS R DR+ ++ A+ Sbjct 504 DGAITVSFVREGNAKGVLPTTLIGRAILEGSLLRLETNSMQRADRLRRLVSERLGALA-- 561 Query 752 DDDRRPLRNTREAAALAEQMPVTGAGAPDPDSPELAAALEEFIR----DYETSWLDQPIP 807 R A +A G A + + E +R ++ SWLD+ IP Sbjct 562 -----SFRIREHADPVAHLAEGAGRSARPAAPEPMPPEVLEVVRRMQAEHYRSWLDEEIP 616 Query 808 ALDGHTPRQAA 818 AL G TPR+AA Sbjct 617 ALGGLTPREAA 627 >gi|254451191|ref|ZP_05064628.1| conserved hypothetical protein [Octadecabacter antarcticus 238] gi|254452834|ref|ZP_05066271.1| conserved hypothetical protein [Octadecabacter antarcticus 238] gi|198265597|gb|EDY89867.1| conserved hypothetical protein [Octadecabacter antarcticus 238] gi|198267240|gb|EDY91510.1| conserved hypothetical protein [Octadecabacter antarcticus 238] Length=454 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/318 (26%), Positives = 129/318 (41%), Gaps = 55/318 (17%) Query 564 SVFEVEHVQPGEGVIVRDVRTGDTHEV--HERAASRQLRAGQLICARPVPAGDTMVFFGG 621 S++EV +V+ GE ++++D+ GD V E++A+R L+ I R + GDT V G Sbjct 115 SLYEVSNVKLGESMVLKDL-VGDRERVTVFEKSATRSLKQWDRIAVRVIAEGDTHVISGA 173 Query 622 IEPVALHERAVLIE--------------------LLDDEP--DPVTLVAQLSRRFAP--P 657 + + L E L+D P L L + + P Sbjct 174 LLAFSAEAVEFLFEGLRAAMKLKGNAPLQLTTRQLMDCAPVFTSAWLFTTLPKAMSSGIP 233 Query 658 TLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEP--PRWIEHV-------TND 708 L N++GD + + R+ P +Q + D V G P PR+ + Sbjct 234 ELCNSDGDDVMFHDLRFRLA-PGVLQKEIAACLDDVKGFVPEGPRFWNWLALRNTPKKGS 292 Query 709 GML--------RVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRN 760 GM+ V TL L G +L V+ NS R +++ A + +RPL Sbjct 293 GMMLDTEMTGRTVLGTLELKGKSLLVQVNSAARAEKIAALVIEATGKRL-----KRPLTA 347 Query 761 TREA-AALAEQMPVTGAGAPDPDSPELAAAL-EEFIRDYETSWLDQPIPALDGHTPRQAA 818 R ++E+ T D P + + +++ + LD P+PALDG +PRQA Sbjct 348 IRTVEQVMSEERAETSLEGADEIPPHIEKQITHDYMDKHYRETLDAPLPALDGKSPRQAV 407 Query 819 DDPTRR---ADLIKLLDT 833 R D +KLL+ Sbjct 408 RSAAGREKVVDWLKLLEN 425 >gi|257094679|ref|YP_003168320.1| SEC-C motif domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047203|gb|ACV36391.1| SEC-C motif domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length=469 Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 122/466 (27%), Positives = 188/466 (41%), Gaps = 68/466 (14%) Query 447 LGRNEACWCGSGRKYKKCHLGREA----------LPLAER-VDWLYAKASQHALSGDWTG 495 +GRN+ C CGSG+KYK+C A AER +DWL K + Sbjct 5 IGRNDPCPCGSGKKYKQCCANSPADFVEPERKGHAGAAERAIDWLMNKHRKAVSVAITER 64 Query 496 LLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVRGSLLPDDERLLA 555 L E+S E +++D++ ++ + + +L EG E L V G P E LL Sbjct 65 LFDELSPEEEEALNANDQETWSSIQRN--ATEWLLAEG----EIL-VHGEPRPVSEYLLG 117 Query 556 ----------EQWL--LVER--SVFEVEHVQPGEGVIVRDVRTGDTHE--VHERAASRQL 599 +W+ L ER +++V V PG+ + + D + V ER+ S+ Sbjct 118 PGGPLFTVDQRRWITQLAERPLRLYDVTDVVPGQQLTLCDSLDVEAPPIIVRERSGSQAA 177 Query 600 RAGQLICARPVP-------AGDTMVFFGGIEPVALHERAVLIELLD----DEPDPVTLVA 648 G I R + +G F P + L D D P ++ + Sbjct 178 LLGVQIGVRIMAVDGHYELSGAIYAFSHLTGPAVAARIREAMHLFDGQGSDLPHLLSSII 237 Query 649 Q---LSRRFAP---PTLVNT-EGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRW 701 Q L++ FAP P + G+ + + RV D A + +L D V+G+ W Sbjct 238 QRQWLTQFFAPLPMPAFRDAYSGEPMLLITDHYRVQDWAALTQSLSAQND-VEGDRDSAW 296 Query 702 IEHV-TNDGMLRVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRN 760 + +G R AT+ ++ ++ + + A RL + R R Sbjct 297 NRLIDCKEGQTRSVATINVEKSPNKITVFYKTQR---YADEGRLWFESVAGNAVRFLSRE 353 Query 761 TREAAALAEQMPV----TGAGAPDPDSPE-LAAALEEFIRDYETSWLDQPIPALDGHTPR 815 + A L MP AGA SPE LA +E +R+ W D+PIPAL G TPR Sbjct 354 LSDPAGLLRSMPAGQRAKPAGAGLDLSPEALAEVVESTLREMYAKWSDEPIPALAGKTPR 413 Query 816 QAADDPT---RRADLIKLLDTFPAGAGARGG---MDADRLRTALGL 855 QA + P R LI++ + A+ G + D L ALG+ Sbjct 414 QAINTPAGLERVKGLIRMYEASEKRQAAQQGRRTISFDFLWQALGI 459 >gi|148655739|ref|YP_001275944.1| SecC motif-containing protein [Roseiflexus sp. RS-1] gi|148567849|gb|ABQ89994.1| SEC-C motif domain protein [Roseiflexus sp. RS-1] Length=286 Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/193 (32%), Positives = 87/193 (46%), Gaps = 24/193 (12%) Query 447 LGRNEACWCGSGRKYKKCHLGREALPLAER------VDWLYAK----------ASQHALS 490 +GRN+ C CGSG+KYK+C L RE AE+ VD L K +AL Sbjct 4 VGRNDPCPCGSGKKYKQCCLPREEAARAEQLRLRRSVDTLLPKIIDAARAIPEVVPNALQ 63 Query 491 GDWTGLLAEVSYERFRYADSDD-EDALAAALADPLVLDAVLFEGGAFAEFLEVRGSLL-- 547 W G Y + A+ DD ED A L D L +G E L S L Sbjct 64 RYWNG-----KYAPEQLAELDDLEDRGADRFLTWLAFDYRLDDGQTLVERLAADDSALDL 118 Query 548 PDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICA 607 + ER L QW V + V+ ++ G+ + V D+ + ++ + + AASR+L G ++ Sbjct 119 SEPERQLLPQWAGVGLRAWVVDTIRKGQEIEVHDLLSEQSYVIADSAASRRLATGDVVVG 178 Query 608 RPVPAGDTMVFFG 620 +PAG V G Sbjct 179 HLLPAGAKRVIGG 191 >gi|156743381|ref|YP_001433510.1| SecC motif-containing protein [Roseiflexus castenholzii DSM 13941] gi|156234709|gb|ABU59492.1| SEC-C motif domain protein [Roseiflexus castenholzii DSM 13941] Length=284 Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/193 (33%), Positives = 86/193 (45%), Gaps = 24/193 (12%) Query 447 LGRNEACWCGSGRKYKKCHLGREALPLAER------VDWLYAKASQ----------HALS 490 +GRN+ C CGSG+KYK CHL E AE+ VD L K AL Sbjct 4 IGRNDPCPCGSGKKYKHCHLPIEEAARAEQLRLRRAVDTLMPKVIDAARMAPEVVPDALQ 63 Query 491 GDWTGLLAEVSYERFRYADSDD-EDALAAALADPLVLDAVLFEGGAFAEFL-EVRGSL-L 547 W G Y + A+ DD E+ A L D +G E L E +L L Sbjct 64 RFWNG-----KYATEQLAELDDLENRGADRFLTWLAFDYRFDDGRTLVERLAEDPVALDL 118 Query 548 PDDERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICA 607 + ER L QW V F V+ V+ G+ + V D+ + + + + AASR+L G ++ Sbjct 119 SEPERQLLPQWTGVGLRAFVVDVVRKGQHIEVHDLLSEQPYAIADSAASRRLAPGDVVVG 178 Query 608 RPVPAGDTMVFFG 620 +PAG+ V G Sbjct 179 HLLPAGEKQVIGG 191 >gi|146279553|ref|YP_001169711.1| hypothetical protein Rsph17025_3536 [Rhodobacter sphaeroides ATCC 17025] gi|145557794|gb|ABP72406.1| hypothetical protein Rsph17025_3536 [Rhodobacter sphaeroides ATCC 17025] Length=452 Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 90/340 (27%), Positives = 132/340 (39%), Gaps = 76/340 (22%) Query 564 SVFEVEHVQPGEGVIVRDVRTG-DTHEVHERAASRQLRAGQLICARPVPAGDTMVFFGGI 622 S+ EV V PG+ + +RD+ TG + V E++A+R L+ I AR VP D V GG+ Sbjct 107 SLHEVSDVVPGQSMALRDLLTGGEPVTVREKSATRSLKQWDRIVARVVPVRDHHVIAGGV 166 Query 623 EPVALHERAVLIELLDD------EPDPVTLVAQLSRRFAP-------------------P 657 P A +L L D +P V QL R AP P Sbjct 167 LPFAAEAVEMLFGGLRDALRLRKTAEPRLTVDQL-RHCAPIFSGAWFFTHLPGLLNPQAP 225 Query 658 TLVNTEGDSLAICEASVRVDDPAGIQGALDGVYDRV-----DGEEPPRW----------- 701 L NT+G+ L E P QG + RV DG + W Sbjct 226 HLTNTDGEELEFHELHFPF-APRVAQGQVAAALSRVPDLSRDGSKSWGWLARTKPAAGKK 284 Query 702 --------IEHVTNDGMLRVRATLVLDGDTLRVETNSEPRMDRVLATLTR-----LDPAM 748 +E + G V ++ + G L + NS+ R R A + L P + Sbjct 285 KEDAPGLALETFSEGGT--VLGSMEMKGKALILRVNSKERAARGEAMIMAAAGDLLRPPL 342 Query 749 TVLDDDRRPLRNTREAAA----LAEQMPVTGAGAPDPDSPELA-AALEEFIRDYETSWLD 803 T + + +R+ R+A AE++P PELA L++ + + LD Sbjct 343 TTIQTVEQAMRD-RDARGGPKDAAEEIP-----------PELARQILQDHLDRHYRDTLD 390 Query 804 QPIPALDGHTPRQAADDPTRRADLIKLLDTFPAGAGARGG 843 QPIP L G +PRQA + R ++ L + G Sbjct 391 QPIPVLGGKSPRQAVRSASGRRKVVDWLKYLENSSAQNEG 430 >gi|309791557|ref|ZP_07686056.1| SecC motif-containing protein [Oscillochloris trichoides DG6] gi|308226417|gb|EFO80146.1| SecC motif-containing protein [Oscillochloris trichoides DG6] Length=309 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 53/184 (29%), Positives = 80/184 (44%), Gaps = 16/184 (8%) Query 445 RDLGRNEACWCGSGRKYKKCHL------GREALPLAERVDWLYAKASQHALS--GDWTGL 496 + LGRN+ C CGSGRKYK+CHL E L L + D L K + A S + Sbjct 8 KKLGRNDPCHCGSGRKYKECHLIIEEAARSEQLLLRQAQDSLLPKIIEAAQSVPEQFPEA 67 Query 497 LAEVSYERFRYADSDD----EDALAAALADPLVLDAVLFEGGAFAEFLEV---RGSLLPD 549 A ++ + D ED A D +G E L G+ D Sbjct 68 FARFWENKYTFEQMSDLDSVEDRGAERFLTWFAFDFRQQDGQTLIEQLNTAADAGTFEVD 127 Query 550 D-ERLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICAR 608 ER L EQW V + V ++ G+G+++RD+ +V + A+++L G+++ Sbjct 128 PYERRLLEQWRTVRLRPYIVTEIRKGKGMLLRDLLGEQEFDVTDYNAAKRLEVGEVVVGH 187 Query 609 PVPA 612 PA Sbjct 188 LTPA 191 >gi|339483667|ref|YP_004695453.1| SEC-C motif domain-containing protein [Nitrosomonas sp. Is79A3] gi|338805812|gb|AEJ02054.1| SEC-C motif domain protein [Nitrosomonas sp. Is79A3] Length=459 Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 106/439 (25%), Positives = 172/439 (40%), Gaps = 59/439 (13%) Query 447 LGRNEACWCGSGRKYKKCHLGREALPLAER----------VDWL---YAKASQHALSGDW 493 +GRN+ C CGSG+KYK+C A + E+ + WL + KA A+ Sbjct 5 IGRNDPCPCGSGKKYKQCCADTSAAIVEEKKGHDGAVERALSWLMDKHRKAVHIAIEEMI 64 Query 494 TGLLAEVSYERFRYADSDDEDALAAALADPLVLDAVLFEGGA---FAEFLEVRGS-LLPD 549 L++ E D + + L+ + + G +E+L +G L Sbjct 65 FDGLSDEEREILEAQDKQTWQGIQLNATEWLLAEGHILVKGEHRRVSEYLLGQGGPLFTV 124 Query 550 DERLLAEQWLLVER--SVFEVEHVQPGEGVIVRDVRTGDT--HEVHERAASRQLRAGQLI 605 D+R Q L +R ++EV V PG+ + + D + V+E++ S+ + G LI Sbjct 125 DQRRWIAQ--LADRPLRLYEVTDVIPGKQMTLCDALNTEALPITVYEKSGSQASQIGMLI 182 Query 606 CARPVPAGDTMVFFGGIEPVALHERAVLI----ELLD-------DEPDPVTLVAQ---LS 651 R + G P + + LI E +D D PD ++ + + L Sbjct 183 GLRIMEVDGHFELSGAGYPFSHLKAQDLIAQIHEAMDQFNKRQKDFPDFLSFMIRRKWLE 242 Query 652 RRFAP---PTLVNT-EGDSLAICEASVRVDDPAGIQGALDGVYDRVDGEEPPRWIEHV-T 706 + +AP PT+++ G+ + + RV D + +L D V G+ W V Sbjct 243 QFYAPMPMPTMMDAYSGEPMLLITDHYRVKDWEALTQSLSSQSD-VQGDRKSGWDRLVDC 301 Query 707 NDGMLRVRATLVLDGD----TLRVETNSEPRMDRVLATLTRLDPAMTVLDDDRRPLRNTR 762 DG R T+ ++ TL +T S R D + R Sbjct 302 EDGATRATVTINIEKTANKITLFYKTQSYADKGRPWFEAIAGDAVQFI-------SRELS 354 Query 763 EAAALAEQMPVTGAGAP---DPDSPE--LAAALEEFIRDYETSWLDQPIPALDGHTPRQA 817 + + MPV P +PD P A +E+ I +W D+ I AL G TPRQA Sbjct 355 DPKGMMANMPVNQKAKPRAAEPDIPPEVYADIIEKTIYRVYANWADESIQALGGKTPRQA 414 Query 818 ADDPTRRADLIKLLDTFPA 836 P + LL ++ A Sbjct 415 IKTPAGLERVKGLLRSYEA 433 >gi|333978065|ref|YP_004516010.1| SEC-C motif domain-containing protein [Desulfotomaculum kuznetsovii DSM 6115] gi|333821546|gb|AEG14209.1| SEC-C motif domain protein [Desulfotomaculum kuznetsovii DSM 6115] Length=499 Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/177 (27%), Positives = 78/177 (45%), Gaps = 13/177 (7%) Query 453 CWCGSGRKYKKCHLGREALPLAERVDWLYAKASQHALSGDW--TGLLAE---VSYERF-- 505 C CGSG+ Y+KC E + E+ W A G++ + A+ + E++ Sbjct 6 CPCGSGKSYRKCCGVGEKVIFLEQYRWRRAGQELRRKLGEFADSQFFAQEALKAQEKYLS 65 Query 506 ----RYADSDDEDALAAALADPLVLDAVLFEGGAFAEFLEVRGSLLPDDERLLAEQWLLV 561 D DDE + + + D VL G E L ++ LLA+ W Sbjct 66 CLDPELVDRDDEFTMERCF-EWFIFDYVLPNGSTIIETFRQNSDLSEREQTLLAD-WAAA 123 Query 562 ERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICARPVPAGDTMVF 618 S++EV V P +GV++RD+ +VH+ A+ +L+ G ++ R + GD F Sbjct 124 RISLYEVLQVLPRKGVVLRDLLQKKELKVHDINAAVELQPGTILLMRILKVGDEYEF 180 Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/93 (32%), Positives = 43/93 (47%), Gaps = 6/93 (6%) Query 769 EQMPVTGAGAPDPDSPELAAALEEFIRD-YETSWLDQPIPALDGHTPRQA---ADDPTRR 824 E P D S +A + E I D Y W+D+P+PAL G TPR+A A+ R Sbjct 253 EYFPSVNDDLFDRISARIAQQITEAILDEYYDRWIDKPVPALGGKTPREACRTAEGRARL 312 Query 825 ADLIKLLDTFPAGAGARG--GMDADRLRTALGL 855 ++ + L+ +G D ++R LGL Sbjct 313 EEMFRELELVETSRELKGEPHYDVQKVRRKLGL 345 >gi|108757805|ref|YP_628325.1| hypothetical protein MXAN_0042 [Myxococcus xanthus DK 1622] gi|108461685|gb|ABF86870.1| hypothetical protein MXAN_0042 [Myxococcus xanthus DK 1622] Length=891 Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 81/310 (27%), Positives = 125/310 (41%), Gaps = 54/310 (17%) Query 554 LAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICARPVPAG 613 LA W SVFEVE V+ G+G+ +RD+ + EV ER+ + Q+ LI + +P Sbjct 89 LAASWC----SVFEVEEVRLGQGLRLRDLVLDEVLEVKERSLTTQVARYDLIASWVIPTE 144 Query 614 DTMVFFGGIEPV-----------ALHERAVLIELLDDEPDPVTLVAQLSRRFAP------ 656 D + GGI + A H A DD P + +RR AP Sbjct 145 DHLELVGGIVAIPRPLREHVVVAARHAFATHQPPADDAPG----RRRQARRLAPFLFTRV 200 Query 657 -------PTLVNTEGDSLAICEASVRVDDPAGIQGAL---DGVYDRVDGEEPPRWIEHVT 706 L+N E + L +C A R+ PA ++ L DG +G H Sbjct 201 LELLTTERPLLNFEDEPLRLCTARFRIRHPAKVEEHLRRHDGFTREGEG--------HYN 252 Query 707 NDG-MLRVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVLDDDR-RPLRNTREA 764 +G V +L ++G L + T+S R+++ A L L A ++D P+++ R Sbjct 253 WEGPRAAVWGSLTVEGKVLVLTTHSAQRLEKGKALLEELLGAEAEHEEDTVGPVQSVRGE 312 Query 765 AALAEQMPVTGAGAPDPDSPELAAALEEFIRDYETSWLDQPIPALDGHTPRQAADDPTRR 824 A A PD P+LA A + L + IPA G + R Sbjct 313 PARA---------LPDDAPPQLADAFALMLAQRAREELSRGIPAWGGRSASDLMRSTEGR 363 Query 825 ADLIKLLDTF 834 A +++ L + Sbjct 364 AQVLEWLKDW 373 >gi|163848371|ref|YP_001636415.1| SecC motif-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222526294|ref|YP_002570765.1| SEC-C motif domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163669660|gb|ABY36026.1| SEC-C motif domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450173|gb|ACM54439.1| SEC-C motif domain protein [Chloroflexus sp. Y-400-fl] Length=279 Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/181 (29%), Positives = 78/181 (44%), Gaps = 15/181 (8%) Query 447 LGRNEACWCGSGRKYKKCHLGRE------ALPLAERVDWLYAKASQHALSGDWTGL---L 497 LGRN+ C CGSGRKYK CHL E L L D L + A + L Sbjct 9 LGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAEAAELQTAF 68 Query 498 AEVSYERFRYADSDDEDALAAALADPLV----LDAVLFEGGAFAEFL--EVRGSLLPDDE 551 +R+++A + + AD + D +G E + +++ S L E Sbjct 69 DRYWQQRYQFAQLAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQESDLSPLE 128 Query 552 RLLAEQWLLVERSVFEVEHVQPGEGVIVRDVRTGDTHEVHERAASRQLRAGQLICARPVP 611 R L W+ V ++VE + P G +RD+ TG+ + + AS +L ++I VP Sbjct 129 RQLLPTWVNVRLRPYQVERLHPNAGATLRDLLTGEALILADSHASLRLELAEVIVGHLVP 188 Query 612 A 612 Sbjct 189 V 189 >gi|258512924|ref|YP_003189181.1| hypothetical protein APA01_40140 [Acetobacter pasteurianus IFO 3283-01] gi|256634827|dbj|BAI00802.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256637882|dbj|BAI03850.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] 6 more sequence titles Length=456 Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 84/342 (25%), Positives = 133/342 (39%), Gaps = 65/342 (19%) Query 564 SVFEVEHVQPGEGVIVRDV-RTGDTHEVHERAASRQLRAGQLICARPVPAGDTMVFFGGI 622 S++EV ++PG+ ++ RD+ R GD VHE A+R L I AR V + + GG+ Sbjct 104 SLYEVSDIKPGQSLMARDLLRGGDPVLVHEGTATRTLEQWDRIAARLVLSDGKTILAGGL 163 Query 623 --------EPVALHERAVL-------------IELLDDEPDPVTL------VAQLSRRFA 655 E +A H VL + L + TL + ++R+ Sbjct 164 LAYSRGACEDLATHLYKVLRKRRGKAEFPKVDTQTLRELAPMFTLTWLFRTLEDMARQME 223 Query 656 PPTLVNTEGDSLA---ICEASVRVDDPAGIQGALDGVY---------------------D 691 P L N +G+ L +C + + LDG+ Sbjct 224 GPALFNGDGEDLVFHEVCFPLAKGVTQKTVADVLDGIMALRPENRSFWNWLKEPMSDPVR 283 Query 692 RVDGEEPPRWIEHVTNDGMLRVRATLVLDGDTLRVETNSEPRMDRVLATLTRLDPAMTVL 751 + +E R++ +DG + V TL L G LR++ NS+ R +R A L + + Sbjct 284 KAGRDENGRFLRTEMDDGAI-VLGTLDLKGRQLRLQVNSKERAERGRAMLQ-----VGLG 337 Query 752 DDDRRPLRNTREAAALAEQMPVTGAG-APDPDSP--ELAAALEEFIRDYETSWLDQPIPA 808 D P A E G +P+ P E A + + + + LD+P+PA Sbjct 338 DLVHAPFTQIMTPAQAMEDRGTHGREVSPELQIPPEEEARIIGQMLERHYRQVLDEPVPA 397 Query 809 LDGHTPRQAADDPTRRADLIKLL----DTFPAGAGARGGMDA 846 L TPRQA + R + L +T G+ G M A Sbjct 398 LGDLTPRQAVQTASGRKKVAIWLKDIENTTVRAQGSGGAMAA 439 >gi|163797760|ref|ZP_02191707.1| hypothetical protein BAL199_13940 [alpha proteobacterium BAL199] gi|159176980|gb|EDP61544.1| hypothetical protein BAL199_13940 [alpha proteobacterium BAL199] Length=468 Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 86/372 (24%), Positives = 145/372 (39%), Gaps = 90/372 (24%) Query 551 ERLLAEQWLLVER----SVFEVEHVQPGEGVIVRD-VRTGDTHEVHERAASRQLRAGQLI 605 E++ A+++L R S++EV + PG+ + VRD +R GD V E+ S I Sbjct 92 EKVPAKRYLTAIRDSVISLYEVVDLDPGKAMTVRDMIRGGDPVTVEEKLGSESAARWDRI 151 Query 606 CARPVPAGDTMVFFGGIEPVALHERAVLIELLDD----------------------EPDP 643 AR V + F GG+ ++ + + + ++ P+ Sbjct 152 AARLVTVNNKPCFTGGMLLLSHEASSKFMAVFEETARVFRTKLRREAKKQGESPEISPEA 211 Query 644 VT----------------LVAQLSRRFAP-PTLVNTEGDSLAICEASVRVD-DPAGIQGA 685 V L L + AP P + NT+GD + E + D A + Sbjct 212 VKALLLQSSGARLFTQAWLTDALGQINAPLPEMRNTDGDKIMFSEVRFPISGDEAKLVAV 271 Query 686 LDGVYDRVDGEEP--PRWIEH---------------------VTNDGMLRVRATLVLDGD 722 +DG+ D ++ P W H V + G + + V +G Sbjct 272 IDGI-DYIERNAPVEASWTWHGRGSPSQRMAAKKREGLTFQSVDDSGRTSLGSIEVKNG- 329 Query 723 TLRVETNSEPRMDR---VLAT--LTRLDPAMTVLDDDRRPLRNTREAAALAEQMPVTGAG 777 L + TNS R ++ +LA+ + + P + +D R L ++ G+ Sbjct 330 ALLLSTNSRERAEKGRDLLASHLSSLIGPPLISHEDIDRALERSK------------GSQ 377 Query 778 APDPDS--PELAAAL-EEFIRDYETSWLDQPIPALDGHTPRQAADDPTRRADLIKLLDTF 834 + D D PE+AA + ++ D+ LD P+P LDG +PRQAA RA +I+ L Sbjct 378 SSDKDDIPPEIAAQIIHNYLDDHYRRTLDDPLPFLDGKSPRQAAKTKNGRAQVIEWLKRL 437 Query 835 PAGAGARGGMDA 846 R D+ Sbjct 438 ENSEHRRATTDS 449 >gi|172058433|ref|YP_001814893.1| preprotein translocase, SecA subunit [Exiguobacterium sibiricum 255-15] gi|171990954|gb|ACB61876.1| preprotein translocase, SecA subunit [Exiguobacterium sibiricum 255-15] Length=839 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 19/31 (62%), Positives = 23/31 (75%), Gaps = 1/31 (3%) Query 440 RAQPRRDLGRNEACWCGSGRKYKKCHLGREA 470 R P +GRN+ CWCGSG+KYK CH GR+A Sbjct 810 RKNPNEQIGRNDPCWCGSGKKYKNCH-GRQA 839 Lambda K H 0.319 0.137 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2083166670236 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40