BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0614
Length=330
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607754|ref|NP_215128.1| hypothetical protein Rv0614 [Mycoba... 655 0.0
gi|340625637|ref|YP_004744089.1| hypothetical protein MCAN_06161... 647 0.0
gi|289568550|ref|ZP_06448777.1| conserved hypothetical protein [... 603 9e-171
gi|15840016|ref|NP_335053.1| hypothetical protein MT0644 [Mycoba... 590 8e-167
gi|289749113|ref|ZP_06508491.1| conserved hypothetical protein [... 525 3e-147
gi|326905163|gb|EGE52096.1| hypothetical protein TBPG_03095 [Myc... 511 7e-143
gi|148821816|ref|YP_001286570.1| hypothetical protein TBFG_10625... 491 8e-137
gi|240170349|ref|ZP_04749008.1| hypothetical protein MkanA1_1363... 294 2e-77
gi|183980150|ref|YP_001848441.1| hypothetical protein MMAR_0116 ... 246 3e-63
gi|183984032|ref|YP_001852323.1| hypothetical protein MMAR_4061 ... 105 9e-21
gi|342860790|ref|ZP_08717440.1| hypothetical protein MCOL_18003 ... 62.4 9e-08
gi|41408570|ref|NP_961406.1| hypothetical protein MAP2472 [Mycob... 57.4 3e-06
gi|336460919|gb|EGO39802.1| hypothetical protein MAPs_35850 [Myc... 57.4 3e-06
gi|31791801|ref|NP_854294.1| galactose-1-phosphate uridylyltrans... 53.9 4e-05
gi|340625641|ref|YP_004744093.1| galactose-1-phosphate uridylylt... 53.9 4e-05
gi|121636538|ref|YP_976761.1| putative galactose-1-phosphate uri... 53.9 4e-05
gi|289749118|ref|ZP_06508496.1| galactose-1-phosphate uridylyltr... 53.5 5e-05
gi|289752660|ref|ZP_06512038.1| LOW QUALITY PROTEIN: galactose-1... 53.1 5e-05
gi|306806435|ref|ZP_07443103.1| galactose-1-phosphate uridylyltr... 53.1 6e-05
gi|118466269|ref|YP_881458.1| hypothetical protein MAV_2254 [Myc... 53.1 6e-05
gi|57116760|ref|YP_177741.1| galactose-1-phosphate uridylyltrans... 53.1 6e-05
gi|340627558|ref|YP_004746010.1| hypothetical protein MCAN_25831... 51.2 2e-04
gi|342858515|ref|ZP_08715170.1| hypothetical protein MCOL_06556 ... 51.2 2e-04
gi|41407431|ref|NP_960267.1| hypothetical protein MAP1333 [Mycob... 51.2 2e-04
gi|183980511|ref|YP_001848802.1| hypothetical protein MMAR_0482 ... 50.8 3e-04
gi|118464597|ref|YP_882327.1| hypothetical protein MAV_3143 [Myc... 50.8 3e-04
gi|254775594|ref|ZP_05217110.1| hypothetical protein MaviaA2_131... 50.8 3e-04
gi|336457784|gb|EGO36778.1| hypothetical protein MAPs_18830 [Myc... 50.8 3e-04
gi|118466271|ref|YP_880360.1| hypothetical protein MAV_1108 [Myc... 49.7 6e-04
gi|307085228|ref|ZP_07494341.1| hypothetical protein TMLG_02269 ... 48.5 0.001
gi|254551592|ref|ZP_05142039.1| hypothetical protein Mtube_14227... 48.5 0.001
gi|31793724|ref|NP_856217.1| hypothetical protein Mb2571 [Mycoba... 48.5 0.001
gi|15609679|ref|NP_217058.1| hypothetical protein Rv2542 [Mycoba... 48.5 0.001
gi|254232663|ref|ZP_04925990.1| conserved hypothetical protein [... 48.5 0.001
gi|118616854|ref|YP_905186.1| hypothetical protein MUL_1133 [Myc... 47.8 0.003
gi|254821916|ref|ZP_05226917.1| galactose-1-phosphate uridylyltr... 47.4 0.003
gi|118616488|ref|YP_904820.1| galactose-1-phosphate uridylyltran... 46.2 0.007
gi|296164510|ref|ZP_06847081.1| conserved hypothetical protein [... 45.8 0.010
gi|118464810|ref|YP_882824.1| hypothetical protein MAV_3647 [Myc... 45.1 0.017
gi|340626959|ref|YP_004745411.1| hypothetical protein MCAN_19661... 44.3 0.025
gi|289570036|ref|ZP_06450263.1| conserved hypothetical protein [... 44.3 0.030
gi|289762103|ref|ZP_06521481.1| conserved hypothetical protein [... 44.3 0.031
gi|31793141|ref|NP_855634.1| hypothetical protein Mb1984c [Mycob... 44.3 0.031
gi|15841420|ref|NP_336457.1| hypothetical protein MT1999 [Mycoba... 43.9 0.034
gi|15609086|ref|NP_216465.1| hypothetical protein Rv1949c [Mycob... 43.9 0.034
gi|118464060|ref|YP_880692.1| hypothetical protein MAV_1450 [Myc... 41.6 0.16
gi|289754650|ref|ZP_06514028.1| conserved hypothetical protein [... 41.6 0.19
gi|118470958|ref|YP_887993.1| galactose-1-phosphate uridylyltran... 40.8 0.30
gi|254774328|ref|ZP_05215844.1| hypothetical protein MaviaA2_066... 40.4 0.38
gi|118464941|ref|YP_880720.1| hypothetical protein MAV_1479 [Myc... 39.7 0.60
>gi|15607754|ref|NP_215128.1| hypothetical protein Rv0614 [Mycobacterium tuberculosis H37Rv]
gi|31791797|ref|NP_854290.1| hypothetical protein Mb0631 [Mycobacterium bovis AF2122/97]
gi|121636533|ref|YP_976756.1| hypothetical protein BCG_0661 [Mycobacterium bovis BCG str. Pasteur
1173P2]
25 more sequence titles
Length=330
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/330 (99%), Positives = 330/330 (100%), Gaps = 0/330 (0%)
Query 1 LPAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA 60
+PAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA
Sbjct 1 MPAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA 60
Query 61 ASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA 120
ASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA
Sbjct 61 ASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA 120
Query 121 QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV 180
QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV
Sbjct 121 QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV 180
Query 181 DVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ 240
DVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ
Sbjct 181 DVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ 240
Query 241 SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE 300
SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE
Sbjct 241 SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE 300
Query 301 TGAGVVAAAAGGVGAATAGVSLLQCLVGSK 330
TGAGVVAAAAGGVGAATAGVSLLQCLVGSK
Sbjct 301 TGAGVVAAAAGGVGAATAGVSLLQCLVGSK 330
>gi|340625637|ref|YP_004744089.1| hypothetical protein MCAN_06161 [Mycobacterium canettii CIPT
140010059]
gi|340003827|emb|CCC42956.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=330
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/330 (99%), Positives = 328/330 (99%), Gaps = 0/330 (0%)
Query 1 LPAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA 60
+PAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA
Sbjct 1 MPAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA 60
Query 61 ASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA 120
ASRGLTSGTSR GWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA
Sbjct 61 ASRGLTSGTSRRGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA 120
Query 121 QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV 180
QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV
Sbjct 121 QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV 180
Query 181 DVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ 240
DVKQDGGTSPPPPFAPWDTPDGT PPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ
Sbjct 181 DVKQDGGTSPPPPFAPWDTPDGTLPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ 240
Query 241 SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE 300
SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE
Sbjct 241 SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE 300
Query 301 TGAGVVAAAAGGVGAATAGVSLLQCLVGSK 330
TGAGVVAAAAGGVGAATAGVSLLQCLVGSK
Sbjct 301 TGAGVVAAAAGGVGAATAGVSLLQCLVGSK 330
>gi|289568550|ref|ZP_06448777.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289756693|ref|ZP_06516071.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|308231601|ref|ZP_07663890.1| hypothetical protein TMAG_02494 [Mycobacterium tuberculosis SUMu001]
21 more sequence titles
Length=304
Score = 603 bits (1556), Expect = 9e-171, Method: Compositional matrix adjust.
Identities = 303/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%)
Query 27 VRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPT 86
+RCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPT
Sbjct 1 MRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPT 60
Query 87 RWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKIT 146
RWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKIT
Sbjct 61 RWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKIT 120
Query 147 AATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPP 206
AATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPP
Sbjct 121 AATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPP 180
Query 207 GTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADI 266
GTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADI
Sbjct 181 GTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADI 240
Query 267 EYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCL 326
EYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCL
Sbjct 241 EYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCL 300
Query 327 VGSK 330
VGSK
Sbjct 301 VGSK 304
>gi|15840016|ref|NP_335053.1| hypothetical protein MT0644 [Mycobacterium tuberculosis CDC1551]
gi|253797551|ref|YP_003030552.1| hypothetical protein TBMG_00622 [Mycobacterium tuberculosis KZN
1435]
gi|289552866|ref|ZP_06442076.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|13880160|gb|AAK44867.1| hypothetical protein MT0644 [Mycobacterium tuberculosis CDC1551]
gi|253319053|gb|ACT23656.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289437498|gb|EFD19991.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|328457331|gb|AEB02754.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length=297
Score = 590 bits (1522), Expect = 8e-167, Method: Compositional matrix adjust.
Identities = 297/297 (100%), Positives = 297/297 (100%), Gaps = 0/297 (0%)
Query 34 MGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADG 93
MGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADG
Sbjct 1 MGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADG 60
Query 94 RELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIA 153
RELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIA
Sbjct 61 RELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIA 120
Query 154 TTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPT 213
TTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPT
Sbjct 121 TTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPT 180
Query 214 LQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADIEYARTHC 273
LQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADIEYARTHC
Sbjct 181 LQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADIEYARTHC 240
Query 274 STNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCLVGSK 330
STNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCLVGSK
Sbjct 241 STNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCLVGSK 297
>gi|289749113|ref|ZP_06508491.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289689700|gb|EFD57129.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|323720969|gb|EGB30034.1| hypothetical protein TMMG_03320 [Mycobacterium tuberculosis CDC1551A]
Length=266
Score = 525 bits (1353), Expect = 3e-147, Method: Compositional matrix adjust.
Identities = 265/266 (99%), Positives = 266/266 (100%), Gaps = 0/266 (0%)
Query 65 LTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA 124
+TSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA
Sbjct 1 MTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA 60
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ 184
GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ
Sbjct 61 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ 120
Query 185 DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA 244
DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA
Sbjct 121 DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA 180
Query 245 NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG 304
NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG
Sbjct 181 NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG 240
Query 305 VVAAAAGGVGAATAGVSLLQCLVGSK 330
VVAAAAGGVGAATAGVSLLQCLVGSK
Sbjct 241 VVAAAAGGVGAATAGVSLLQCLVGSK 266
>gi|326905163|gb|EGE52096.1| hypothetical protein TBPG_03095 [Mycobacterium tuberculosis W-148]
Length=346
Score = 511 bits (1316), Expect = 7e-143, Method: Compositional matrix adjust.
Identities = 257/258 (99%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 65 LTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA 124
+TSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA
Sbjct 1 MTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA 60
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ 184
GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ
Sbjct 61 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ 120
Query 185 DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA 244
DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA
Sbjct 121 DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA 180
Query 245 NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG 304
NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG
Sbjct 181 NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG 240
Query 305 VVAAAAGGVGAATAGVSL 322
VVAAAAGGVGAATAGVSL
Sbjct 241 VVAAAAGGVGAATAGVSL 258
>gi|148821816|ref|YP_001286570.1| hypothetical protein TBFG_10625 [Mycobacterium tuberculosis F11]
gi|167969039|ref|ZP_02551316.1| hypothetical protein MtubH3_13837 [Mycobacterium tuberculosis
H37Ra]
gi|254230950|ref|ZP_04924277.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
9 more sequence titles
Length=249
Score = 491 bits (1263), Expect = 8e-137, Method: Compositional matrix adjust.
Identities = 248/249 (99%), Positives = 249/249 (100%), Gaps = 0/249 (0%)
Query 82 VTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV 141
+TAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV
Sbjct 1 MTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV 60
Query 142 ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPD 201
ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPD
Sbjct 61 ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPD 120
Query 202 GTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQA 261
GTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQA
Sbjct 121 GTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQA 180
Query 262 HVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVS 321
HVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVS
Sbjct 181 HVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVS 240
Query 322 LLQCLVGSK 330
LLQCLVGSK
Sbjct 241 LLQCLVGSK 249
>gi|240170349|ref|ZP_04749008.1| hypothetical protein MkanA1_13635 [Mycobacterium kansasii ATCC
12478]
Length=346
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/250 (61%), Positives = 178/250 (72%), Gaps = 7/250 (2%)
Query 87 RWTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV 141
++ + D E F S+ T+ E R AQAQ FA DIR RA +LV ++ +V
Sbjct 98 KYKVQDAEEAGFSVSEDMSVYDTHTTANPVELADRQAQAQAFAEDIRLRAAKLVTADTDV 157
Query 142 ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGT-SPPPPFAPWDTP 200
A K+TA AGI F E + DDTIIG DN+ GV+LVD QD + PPPFAPWDTP
Sbjct 158 AQKVTATMAGIGPQAFGEPINADDTIIG-DNKHNGVQLVDFTQDNAAGTNPPPFAPWDTP 216
Query 201 DGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQ 260
DGTPPPGTGLSP LQQM+LG +PA+LTGQGL +N+QRFVQSLP NDP TAWLRGQVADLQ
Sbjct 217 DGTPPPGTGLSPKLQQMLLGSNPASLTGQGLVENMQRFVQSLPENDPRTAWLRGQVADLQ 276
Query 261 AHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGV 320
AHV DIEYARTHC+T DWI+RT+QFASG IV G+L AETG G+ A AGGVG AG
Sbjct 277 AHVTDIEYARTHCTTRDWIERTSQFASGVIVTGYGLLAAETGVGLAVAGAGGVGTIIAGT 336
Query 321 SLLQCLVGSK 330
+LL+CL GSK
Sbjct 337 NLLRCLTGSK 346
>gi|183980150|ref|YP_001848441.1| hypothetical protein MMAR_0116 [Mycobacterium marinum M]
gi|183173476|gb|ACC38586.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=339
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/207 (65%), Positives = 156/207 (76%), Gaps = 5/207 (2%)
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ 184
GDIR A QL ++ +VA ++TAATA +++ F + P I T +R+ GV+LVD KQ
Sbjct 137 GDIRLHARQLDGADAKVAGQLTAATADLSSVGFAQNP-IPATQAPTTHRN-GVQLVDFKQ 194
Query 185 DGGTSPPPPFAPWDTPDGTPPPGT-GLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLP 243
+GG PPPFAPWDTPDGTPPPG GLSP LQQMILGGDPANLTGQGL DN+Q+ VQSLP
Sbjct 195 NGG--EPPPFAPWDTPDGTPPPGAPGLSPELQQMILGGDPANLTGQGLLDNLQQLVQSLP 252
Query 244 ANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGA 303
NDP TAWLRGQVADLQAH++DI+YARTHC+T+DW DRT FASG + I LTAETG
Sbjct 253 ENDPRTAWLRGQVADLQAHMSDIDYARTHCTTSDWFDRTTLFASGLVSTGILTLTAETGV 312
Query 304 GVVAAAAGGVGAATAGVSLLQCLVGSK 330
G VAA A G G AG +LL CLVGSK
Sbjct 313 GGVAAVASGFGTLVAGKNLLGCLVGSK 339
>gi|183984032|ref|YP_001852323.1| hypothetical protein MMAR_4061 [Mycobacterium marinum M]
gi|183177358|gb|ACC42468.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=336
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/111 (55%), Positives = 73/111 (66%), Gaps = 3/111 (2%)
Query 99 FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP 158
S+ R+SGTAAE+VARHAQAQ FAGDIR RA QL +E +VA +++A AG++ F
Sbjct 111 LSVTDTRSSGTAAEQVARHAQAQAFAGDIRLRAEQLDAAEVKVAGQLSAIRAGLSGIGFA 170
Query 159 ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPPGTG 209
E P + NR G++ VD KQD G PPPFAPWDT D TPPPG G
Sbjct 171 ENPIFNPVAHAPANR-IGIQPVDFKQDSGA--PPPFAPWDTADETPPPGKG 218
>gi|342860790|ref|ZP_08717440.1| hypothetical protein MCOL_18003 [Mycobacterium colombiense CECT
3035]
gi|342131814|gb|EGT85071.1| hypothetical protein MCOL_18003 [Mycobacterium colombiense CECT
3035]
Length=356
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query 99 FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP 158
S+ P T G+ A+R R AQAQ +AGDIRQRA QLV +Q+VA ++T+A AGI TFP
Sbjct 116 MSVTDPSTGGSTAQRATRRAQAQGYAGDIRQRATQLVALDQQVAERVTSAMAGI-RDTFP 174
>gi|41408570|ref|NP_961406.1| hypothetical protein MAP2472 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396928|gb|AAS04789.1| hypothetical protein MAP_2472 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=362
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/87 (45%), Positives = 52/87 (60%), Gaps = 9/87 (10%)
Query 107 SGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID-- 164
S + AER AR A+A+ FA DIR RA QL ++ +VA+++TAATAG+ + F S +
Sbjct 118 STSPAERPARQAEAEAFAADIRLRAEQLDGADTKVAAQLTAATAGLGGSGFAPASSPNSN 177
Query 165 ------DTIIGNDNRDTGVRLVDVKQD 185
D NR+ GVRLVD KQD
Sbjct 178 HGAAAADRTTPGSNRN-GVRLVDFKQD 203
>gi|336460919|gb|EGO39802.1| hypothetical protein MAPs_35850 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=362
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/87 (45%), Positives = 52/87 (60%), Gaps = 9/87 (10%)
Query 107 SGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID-- 164
S + AER AR A+A+ FA DIR RA QL ++ +VA+++TAATAG+ + F S +
Sbjct 118 STSPAERPARQAEAEAFAADIRLRAEQLDGADTKVAAQLTAATAGLGGSGFAPASSPNSN 177
Query 165 ------DTIIGNDNRDTGVRLVDVKQD 185
D NR+ GVRLVD KQD
Sbjct 178 HGAAAADRTTPGSNRN-GVRLVDFKQD 203
>gi|31791801|ref|NP_854294.1| galactose-1-phosphate uridylyltransferase GALT [Mycobacterium
bovis AF2122/97]
gi|31617388|emb|CAD93497.1| PROBABLE GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE GALT [Mycobacterium
bovis AF2122/97]
Length=394
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)
Query 77 LGFGVVTAPTRWTLADGRELLFFSLPG 103
+GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct 30 VGFCVVTAPTRWTLADGRDLLFFSLPG 56
>gi|340625641|ref|YP_004744093.1| galactose-1-phosphate uridylyltransferase [Mycobacterium canettii
CIPT 140010059]
gi|340003831|emb|CCC42960.1| galactose-1-phosphate uridylyltransferase [Mycobacterium canettii
CIPT 140010059]
Length=394
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)
Query 77 LGFGVVTAPTRWTLADGRELLFFSLPG 103
+GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct 30 VGFCVVTAPTRWTLADGRDLLFFSLPG 56
>gi|121636538|ref|YP_976761.1| putative galactose-1-phosphate uridylyltransferase galT [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224989010|ref|YP_002643697.1| putative galactose-1-phosphate uridylyltransferase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|289442011|ref|ZP_06431755.1| galactose-1-phosphate uridylyltransferase [Mycobacterium tuberculosis
T46]
12 more sequence titles
Length=394
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)
Query 77 LGFGVVTAPTRWTLADGRELLFFSLPG 103
+GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct 30 VGFCVVTAPTRWTLADGRDLLFFSLPG 56
>gi|289749118|ref|ZP_06508496.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium
tuberculosis T92]
gi|289689705|gb|EFD57134.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium
tuberculosis T92]
Length=221
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)
Query 77 LGFGVVTAPTRWTLADGRELLFFSLPG 103
+GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct 49 VGFCVVTAPTRWTLADGRDLLFFSLPG 75
>gi|289752660|ref|ZP_06512038.1| LOW QUALITY PROTEIN: galactose-1-phosphate uridylyltransferase
GALT [Mycobacterium tuberculosis EAS054]
gi|289693247|gb|EFD60676.1| LOW QUALITY PROTEIN: galactose-1-phosphate uridylyltransferase
GALT [Mycobacterium tuberculosis EAS054]
Length=232
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)
Query 77 LGFGVVTAPTRWTLADGRELLFFSLPG 103
+GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct 30 VGFCVVTAPTRWTLADGRDLLFFSLPG 56
>gi|306806435|ref|ZP_07443103.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium
tuberculosis SUMu007]
gi|308377480|ref|ZP_07479296.2| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium
tuberculosis SUMu009]
gi|308347086|gb|EFP35937.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium
tuberculosis SUMu007]
gi|308355661|gb|EFP44512.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium
tuberculosis SUMu009]
Length=231
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)
Query 77 LGFGVVTAPTRWTLADGRELLFFSLPG 103
+GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct 30 VGFCVVTAPTRWTLADGRDLLFFSLPG 56
>gi|118466269|ref|YP_881458.1| hypothetical protein MAV_2254 [Mycobacterium avium 104]
gi|118167556|gb|ABK68453.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=354
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/101 (38%), Positives = 51/101 (51%), Gaps = 22/101 (21%)
Query 124 AGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID-----DTIIGNDNR----- 173
A DIR RA QL ++ +V+ ++TAATAG++ F + + + GN +
Sbjct 135 AADIRLRAEQLDGADTKVSGQLTAATAGLSGGGFAQNSTSNRGGRAQNSSGNGGQPQPGH 194
Query 174 -----------DTGVRLVDVKQDGGTSP-PPPFAPWDTPDG 202
GVRLVD QD + P PPPFAPWD PDG
Sbjct 195 NAGQPQPATTNHNGVRLVDFTQDNASGPNPPPFAPWDNPDG 235
>gi|57116760|ref|YP_177741.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium
tuberculosis H37Rv]
gi|148660390|ref|YP_001281913.1| putative galactose-1-phosphate uridylyltransferase GalTa [Mycobacterium
tuberculosis H37Ra]
gi|148821820|ref|YP_001286574.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium
tuberculosis F11]
40 more sequence titles
Length=231
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)
Query 77 LGFGVVTAPTRWTLADGRELLFFSLPG 103
+GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct 30 VGFCVVTAPTRWTLADGRDLLFFSLPG 56
>gi|340627558|ref|YP_004746010.1| hypothetical protein MCAN_25831 [Mycobacterium canettii CIPT
140010059]
gi|340005748|emb|CCC44914.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=361
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (34%), Positives = 52/98 (54%), Gaps = 11/98 (11%)
Query 99 FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP 158
+++ T G+ +R AR QAQ A IR R L+ +++E+A++++AAT G+ F
Sbjct 19 YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDREIATRVSAATQGLDELAFE 78
Query 159 ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP 196
E P +D + GV+ VD +Q PPP AP
Sbjct 79 EVPGVDTPA------EDGVQAVDFRQ-----APPPAAP 105
>gi|342858515|ref|ZP_08715170.1| hypothetical protein MCOL_06556 [Mycobacterium colombiense CECT
3035]
gi|342134219|gb|EGT87399.1| hypothetical protein MCOL_06556 [Mycobacterium colombiense CECT
3035]
Length=358
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 50/83 (61%), Gaps = 9/83 (10%)
Query 111 AERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP-------ETPSI 163
AER AR QA+ FA D+R RA QL ++ +V+ ++TAATAG++ F +P+
Sbjct 122 AERAARQTQAEAFAADLRLRAEQLEGADVKVSGQLTAATAGLSGGGFAPGSGSSHGSPAD 181
Query 164 DDTIIGNDNRDTGVRLVD-VKQD 185
T G+ NR+ G +LVD KQD
Sbjct 182 HHTTPGS-NRNNGAKLVDYFKQD 203
>gi|41407431|ref|NP_960267.1| hypothetical protein MAP1333 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395783|gb|AAS03650.1| hypothetical protein MAP_1333 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=261
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/42 (62%), Positives = 33/42 (79%), Gaps = 1/42 (2%)
Query 123 FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID 164
FAGDIR+RA +LV +Q+VA ++TAATAGI TFP+TP D
Sbjct 140 FAGDIRRRAAELVALDQQVAGRVTAATAGI-RDTFPQTPDSD 180
>gi|183980511|ref|YP_001848802.1| hypothetical protein MMAR_0482 [Mycobacterium marinum M]
gi|183173837|gb|ACC38947.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=371
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/76 (45%), Positives = 45/76 (60%), Gaps = 6/76 (7%)
Query 123 FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDV 182
FAGD+RQRA QLV + +VA+K+TAA AGI ++FP+ P+ +GN VR VD
Sbjct 139 FAGDLRQRAAQLVGLDAQVATKVTAAVAGIG-SSFPQIPAPAAPPMGNP-----VRAVDN 192
Query 183 KQDGGTSPPPPFAPWD 198
+ PP P P D
Sbjct 193 RTFKQNPPPAPVDPKD 208
>gi|118464597|ref|YP_882327.1| hypothetical protein MAV_3143 [Mycobacterium avium 104]
gi|118165884|gb|ABK66781.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=353
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/42 (62%), Positives = 33/42 (79%), Gaps = 1/42 (2%)
Query 123 FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID 164
FAGDIR+RA +LV +Q+VA ++TAATAGI TFP+TP D
Sbjct 137 FAGDIRRRAAELVALDQQVAGRVTAATAGI-RDTFPQTPDSD 177
>gi|254775594|ref|ZP_05217110.1| hypothetical protein MaviaA2_13128 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=298
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/42 (62%), Positives = 33/42 (79%), Gaps = 1/42 (2%)
Query 123 FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID 164
FAGDIR+RA +LV +Q+VA ++TAATAGI TFP+TP D
Sbjct 82 FAGDIRRRAAELVALDQQVAGRVTAATAGI-RDTFPQTPDSD 122
>gi|336457784|gb|EGO36778.1| hypothetical protein MAPs_18830 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=356
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/42 (62%), Positives = 33/42 (79%), Gaps = 1/42 (2%)
Query 123 FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID 164
FAGDIR+RA +LV +Q+VA ++TAATAGI TFP+TP D
Sbjct 140 FAGDIRRRAAELVALDQQVAGRVTAATAGI-RDTFPQTPDSD 180
>gi|118466271|ref|YP_880360.1| hypothetical protein MAV_1108 [Mycobacterium avium 104]
gi|118167558|gb|ABK68455.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=348
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/56 (56%), Positives = 34/56 (61%), Gaps = 6/56 (10%)
Query 123 FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPET-----PSIDDTIIGNDNR 173
AGDIRQRA QLV +QEVA KITAA AG+ TFP PS D + G DN
Sbjct 127 LAGDIRQRAAQLVSLDQEVAGKITAAVAGV-RDTFPHDPTANRPSTDGHVRGVDNH 181
>gi|307085228|ref|ZP_07494341.1| hypothetical protein TMLG_02269 [Mycobacterium tuberculosis SUMu012]
gi|308365183|gb|EFP54034.1| hypothetical protein TMLG_02269 [Mycobacterium tuberculosis SUMu012]
Length=446
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (32%), Positives = 52/98 (54%), Gaps = 11/98 (11%)
Query 99 FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP 158
+++ T G+ +R AR QAQ A IR R L+ +++++A++++AAT G+ F
Sbjct 19 YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFE 78
Query 159 ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP 196
+ P +D + GV+ VD +Q PPP AP
Sbjct 79 DVPGVDTPA------EDGVQAVDFRQ-----APPPGAP 105
>gi|254551592|ref|ZP_05142039.1| hypothetical protein Mtube_14227 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=403
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (32%), Positives = 52/98 (54%), Gaps = 11/98 (11%)
Query 99 FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP 158
+++ T G+ +R AR QAQ A IR R L+ +++++A++++AAT G+ F
Sbjct 19 YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFE 78
Query 159 ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP 196
+ P +D + GV+ VD +Q PPP AP
Sbjct 79 DVPGVDTPA------EDGVQAVDFRQ-----APPPGAP 105
>gi|31793724|ref|NP_856217.1| hypothetical protein Mb2571 [Mycobacterium bovis AF2122/97]
gi|121638426|ref|YP_978650.1| hypothetical protein BCG_2564 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148823737|ref|YP_001288491.1| hypothetical protein TBFG_12562 [Mycobacterium tuberculosis F11]
54 more sequence titles
Length=403
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (32%), Positives = 52/98 (54%), Gaps = 11/98 (11%)
Query 99 FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP 158
+++ T G+ +R AR QAQ A IR R L+ +++++A++++AAT G+ F
Sbjct 19 YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFE 78
Query 159 ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP 196
+ P +D + GV+ VD +Q PPP AP
Sbjct 79 DVPGVDTPA------EDGVQAVDFRQ-----APPPGAP 105
>gi|15609679|ref|NP_217058.1| hypothetical protein Rv2542 [Mycobacterium tuberculosis H37Rv]
gi|148662380|ref|YP_001283903.1| hypothetical protein MRA_2570 [Mycobacterium tuberculosis H37Ra]
gi|167968850|ref|ZP_02551127.1| hypothetical protein MtubH3_12785 [Mycobacterium tuberculosis
H37Ra]
gi|1781060|emb|CAB06196.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148506532|gb|ABQ74341.1| hypothetical protein MRA_2570 [Mycobacterium tuberculosis H37Ra]
Length=403
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (32%), Positives = 52/98 (54%), Gaps = 11/98 (11%)
Query 99 FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP 158
+++ T G+ +R AR QAQ A IR R L+ +++++A++++AAT G+ F
Sbjct 19 YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFE 78
Query 159 ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP 196
+ P +D + GV+ VD +Q PPP AP
Sbjct 79 DVPGVDTPA------EDGVQAVDFRQ-----APPPGAP 105
>gi|254232663|ref|ZP_04925990.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|124601722|gb|EAY60732.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=398
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (35%), Positives = 49/91 (54%), Gaps = 11/91 (12%)
Query 106 TSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDD 165
T G+ +R AR QAQ A IR R L+ +++++A++++AAT G+ F + P +D
Sbjct 21 TGGSRQQRAARVGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFEDVPGVDT 80
Query 166 TIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP 196
+ GV+ VD +Q PPP AP
Sbjct 81 PA------EDGVQAVDFRQ-----APPPGAP 100
>gi|118616854|ref|YP_905186.1| hypothetical protein MUL_1133 [Mycobacterium ulcerans Agy99]
gi|118568964|gb|ABL03715.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=314
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/117 (42%), Positives = 65/117 (56%), Gaps = 11/117 (9%)
Query 87 RWTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV 141
R+ + D + F S+ T G+AA+R AR AQAQ FAGD+ QRA QLV + +V
Sbjct 41 RYAVTDAQAAGFQVEEDLSVTDRMTGGSAAQRAARQAQAQAFAGDLPQRAAQLVGLDAQV 100
Query 142 ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWD 198
A+K+TAA AGI ++FP+ P+ +GN VR VD + PP P P D
Sbjct 101 ATKVTAAVAGIG-SSFPQIPAPAAPPMGNP-----VRAVDNRTFKQNPPPAPVDPKD 151
>gi|254821916|ref|ZP_05226917.1| galactose-1-phosphate uridylyltransferase [Mycobacterium intracellulare
ATCC 13950]
Length=371
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/30 (74%), Positives = 25/30 (84%), Gaps = 0/30 (0%)
Query 76 RLGFGVVTAPTRWTLADGRELLFFSLPGPR 105
+L F +VTAPTR LADGR+LLFFSLPG R
Sbjct 5 KLVFDIVTAPTRAKLADGRDLLFFSLPGHR 34
>gi|118616488|ref|YP_904820.1| galactose-1-phosphate uridylyltransferase, GalT [Mycobacterium
ulcerans Agy99]
gi|118568598|gb|ABL03349.1| galactose-1-phosphate uridylyltransferase, GalT [Mycobacterium
ulcerans Agy99]
Length=385
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (86%), Gaps = 0/28 (0%)
Query 76 RLGFGVVTAPTRWTLADGRELLFFSLPG 103
RL F +VTAPTR LADGRE+LFF+LPG
Sbjct 22 RLVFDIVTAPTRAKLADGREVLFFALPG 49
>gi|296164510|ref|ZP_06847081.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900110|gb|EFG79545.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=406
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/78 (45%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ 184
DIRQRA QLV +Q+VA K+TAATAGI TFP P + VR VD
Sbjct 142 ADIRQRAAQLVALDQQVAGKVTAATAGI-RDTFPPDPG-----AATSPHEPEVRAVDNHT 195
Query 185 DGGTSPPP-----PFAPW 197
PPP PFA W
Sbjct 196 FQRDPPPPGSTDNPFAGW 213
>gi|118464810|ref|YP_882824.1| hypothetical protein MAV_3647 [Mycobacterium avium 104]
gi|118166097|gb|ABK66994.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=235
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/56 (45%), Positives = 36/56 (65%), Gaps = 0/56 (0%)
Query 99 FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIAT 154
S+ R+S T A+ AR A+A+ FAGDIR RA QL +++VA ++T TA + T
Sbjct 111 LSVTDTRSSTTPADHAARQARAEAFAGDIRARAEQLEGVDRKVARELTTTTADLGT 166
>gi|340626959|ref|YP_004745411.1| hypothetical protein MCAN_19661 [Mycobacterium canettii CIPT
140010059]
gi|340005149|emb|CCC44298.1| putative uncharacterized protein flags: fragment [Mycobacterium
canettii CIPT 140010059]
Length=371
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/97 (47%), Positives = 53/97 (55%), Gaps = 8/97 (8%)
Query 73 GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA 124
G R G G + A R + + D F S+ RTS TAAE+ AR AQAQ A
Sbjct 77 GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTAAEQAARQAQAQALA 136
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP 161
GDIRQRA QL+ E EVA+KI ATA + T F E P
Sbjct 137 GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP 173
>gi|289570036|ref|ZP_06450263.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289543790|gb|EFD47438.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=318
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)
Query 73 GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA 124
G R G G + A R + + D F S+ RTS T AE+ AR AQAQ A
Sbjct 24 GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA 83
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP 161
GDIRQRA QL+ E EVA+KI ATA + T F E P
Sbjct 84 GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP 120
>gi|289762103|ref|ZP_06521481.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709609|gb|EFD73625.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=318
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)
Query 73 GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA 124
G R G G + A R + + D F S+ RTS T AE+ AR AQAQ A
Sbjct 24 GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA 83
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP 161
GDIRQRA QL+ E EVA+KI ATA + T F E P
Sbjct 84 GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP 120
>gi|31793141|ref|NP_855634.1| hypothetical protein Mb1984c [Mycobacterium bovis AF2122/97]
gi|121637854|ref|YP_978077.1| hypothetical protein BCG_1988c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990338|ref|YP_002645025.1| hypothetical protein JTY_1972 [Mycobacterium bovis BCG str. Tokyo
172]
16 more sequence titles
Length=300
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)
Query 73 GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA 124
G R G G + A R + + D F S+ RTS T AE+ AR AQAQ A
Sbjct 6 GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA 65
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP 161
GDIRQRA QL+ E EVA+KI ATA + T F E P
Sbjct 66 GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP 102
>gi|15841420|ref|NP_336457.1| hypothetical protein MT1999 [Mycobacterium tuberculosis CDC1551]
gi|148661757|ref|YP_001283280.1| hypothetical protein MRA_1959 [Mycobacterium tuberculosis H37Ra]
gi|148823161|ref|YP_001287915.1| hypothetical protein TBFG_11978 [Mycobacterium tuberculosis F11]
48 more sequence titles
Length=300
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)
Query 73 GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA 124
G R G G + A R + + D F S+ RTS T AE+ AR AQAQ A
Sbjct 6 GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA 65
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP 161
GDIRQRA QL+ E EVA+KI ATA + T F E P
Sbjct 66 GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP 102
>gi|15609086|ref|NP_216465.1| hypothetical protein Rv1949c [Mycobacterium tuberculosis H37Rv]
gi|1806213|emb|CAB06512.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|326903555|gb|EGE50488.1| LOW QUALITY PROTEIN: hypothetical protein TBPG_01431 [Mycobacterium
tuberculosis W-148]
Length=319
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)
Query 73 GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA 124
G R G G + A R + + D F S+ RTS T AE+ AR AQAQ A
Sbjct 25 GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA 84
Query 125 GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP 161
GDIRQRA QL+ E EVA+KI ATA + T F E P
Sbjct 85 GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP 121
>gi|118464060|ref|YP_880692.1| hypothetical protein MAV_1450 [Mycobacterium avium 104]
gi|118165347|gb|ABK66244.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=353
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/84 (40%), Positives = 41/84 (49%), Gaps = 15/84 (17%)
Query 124 AGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDD-----TIIGNDNRDT--- 175
A DIR RA QL ++ +VA ++TAATAG+ F S + G NR +
Sbjct 135 AADIRLRAEQLDGADTKVAGQLTAATAGLGGDGFAPASSHNSRQPSAQKDGGQNRRSTSG 194
Query 176 -------GVRLVDVKQDGGTSPPP 192
GV LVD KQDGG P P
Sbjct 195 VPNSQRGGVHLVDFKQDGGADPSP 218
>gi|289754650|ref|ZP_06514028.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289695237|gb|EFD62666.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=367
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/78 (34%), Positives = 42/78 (54%), Gaps = 11/78 (14%)
Query 119 QAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVR 178
QAQ A IR R L+ +++++A++++AAT G+ F + P +D + GV+
Sbjct 3 QAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFEDVPGVDTPA------EDGVQ 56
Query 179 LVDVKQDGGTSPPPPFAP 196
VD +Q PPP AP
Sbjct 57 AVDFRQ-----APPPGAP 69
>gi|118470958|ref|YP_887993.1| galactose-1-phosphate uridylyltransferase [Mycobacterium smegmatis
str. MC2 155]
gi|118172245|gb|ABK73141.1| galactose-1-phosphate uridylyltransferase [Mycobacterium smegmatis
str. MC2 155]
Length=360
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/22 (78%), Positives = 19/22 (87%), Gaps = 0/22 (0%)
Query 82 VTAPTRWTLADGRELLFFSLPG 103
+T P RWTLADGRE L+FSLPG
Sbjct 1 MTQPLRWTLADGREQLYFSLPG 22
>gi|254774328|ref|ZP_05215844.1| hypothetical protein MaviaA2_06625 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=362
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/70 (43%), Positives = 40/70 (58%), Gaps = 9/70 (12%)
Query 124 AGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID--------DTIIGNDNRDT 175
A DIR RA QL ++ +VA+++TAATAG+ + F S + D NR+
Sbjct 135 AADIRLRAEQLDGADTKVAAQLTAATAGLGGSGFAPASSPNSNHGAAAADRTTPGSNRN- 193
Query 176 GVRLVDVKQD 185
GVRLVD KQD
Sbjct 194 GVRLVDFKQD 203
>gi|118464941|ref|YP_880720.1| hypothetical protein MAV_1479 [Mycobacterium avium 104]
gi|118166228|gb|ABK67125.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=362
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/70 (43%), Positives = 39/70 (56%), Gaps = 9/70 (12%)
Query 124 AGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID--------DTIIGNDNRDT 175
A DIR RA QL ++ +VA ++TAATAG+ + F S + D NR+
Sbjct 135 AADIRLRAEQLDGADTKVAGQLTAATAGLGGSGFAPASSPNSNHGAAAADRTTPGSNRN- 193
Query 176 GVRLVDVKQD 185
GVRLVD KQD
Sbjct 194 GVRLVDFKQD 203
Lambda K H
0.318 0.134 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 586667724920
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40