BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0614

Length=330
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607754|ref|NP_215128.1|  hypothetical protein Rv0614 [Mycoba...   655    0.0   
gi|340625637|ref|YP_004744089.1|  hypothetical protein MCAN_06161...   647    0.0   
gi|289568550|ref|ZP_06448777.1|  conserved hypothetical protein [...   603    9e-171
gi|15840016|ref|NP_335053.1|  hypothetical protein MT0644 [Mycoba...   590    8e-167
gi|289749113|ref|ZP_06508491.1|  conserved hypothetical protein [...   525    3e-147
gi|326905163|gb|EGE52096.1|  hypothetical protein TBPG_03095 [Myc...   511    7e-143
gi|148821816|ref|YP_001286570.1|  hypothetical protein TBFG_10625...   491    8e-137
gi|240170349|ref|ZP_04749008.1|  hypothetical protein MkanA1_1363...   294    2e-77 
gi|183980150|ref|YP_001848441.1|  hypothetical protein MMAR_0116 ...   246    3e-63 
gi|183984032|ref|YP_001852323.1|  hypothetical protein MMAR_4061 ...   105    9e-21 
gi|342860790|ref|ZP_08717440.1|  hypothetical protein MCOL_18003 ...  62.4    9e-08 
gi|41408570|ref|NP_961406.1|  hypothetical protein MAP2472 [Mycob...  57.4    3e-06 
gi|336460919|gb|EGO39802.1|  hypothetical protein MAPs_35850 [Myc...  57.4    3e-06 
gi|31791801|ref|NP_854294.1|  galactose-1-phosphate uridylyltrans...  53.9    4e-05 
gi|340625641|ref|YP_004744093.1|  galactose-1-phosphate uridylylt...  53.9    4e-05 
gi|121636538|ref|YP_976761.1|  putative galactose-1-phosphate uri...  53.9    4e-05 
gi|289749118|ref|ZP_06508496.1|  galactose-1-phosphate uridylyltr...  53.5    5e-05 
gi|289752660|ref|ZP_06512038.1|  LOW QUALITY PROTEIN: galactose-1...  53.1    5e-05 
gi|306806435|ref|ZP_07443103.1|  galactose-1-phosphate uridylyltr...  53.1    6e-05 
gi|118466269|ref|YP_881458.1|  hypothetical protein MAV_2254 [Myc...  53.1    6e-05 
gi|57116760|ref|YP_177741.1|  galactose-1-phosphate uridylyltrans...  53.1    6e-05 
gi|340627558|ref|YP_004746010.1|  hypothetical protein MCAN_25831...  51.2    2e-04 
gi|342858515|ref|ZP_08715170.1|  hypothetical protein MCOL_06556 ...  51.2    2e-04 
gi|41407431|ref|NP_960267.1|  hypothetical protein MAP1333 [Mycob...  51.2    2e-04 
gi|183980511|ref|YP_001848802.1|  hypothetical protein MMAR_0482 ...  50.8    3e-04 
gi|118464597|ref|YP_882327.1|  hypothetical protein MAV_3143 [Myc...  50.8    3e-04 
gi|254775594|ref|ZP_05217110.1|  hypothetical protein MaviaA2_131...  50.8    3e-04 
gi|336457784|gb|EGO36778.1|  hypothetical protein MAPs_18830 [Myc...  50.8    3e-04 
gi|118466271|ref|YP_880360.1|  hypothetical protein MAV_1108 [Myc...  49.7    6e-04 
gi|307085228|ref|ZP_07494341.1|  hypothetical protein TMLG_02269 ...  48.5    0.001 
gi|254551592|ref|ZP_05142039.1|  hypothetical protein Mtube_14227...  48.5    0.001 
gi|31793724|ref|NP_856217.1|  hypothetical protein Mb2571 [Mycoba...  48.5    0.001 
gi|15609679|ref|NP_217058.1|  hypothetical protein Rv2542 [Mycoba...  48.5    0.001 
gi|254232663|ref|ZP_04925990.1|  conserved hypothetical protein [...  48.5    0.001 
gi|118616854|ref|YP_905186.1|  hypothetical protein MUL_1133 [Myc...  47.8    0.003 
gi|254821916|ref|ZP_05226917.1|  galactose-1-phosphate uridylyltr...  47.4    0.003 
gi|118616488|ref|YP_904820.1|  galactose-1-phosphate uridylyltran...  46.2    0.007 
gi|296164510|ref|ZP_06847081.1|  conserved hypothetical protein [...  45.8    0.010 
gi|118464810|ref|YP_882824.1|  hypothetical protein MAV_3647 [Myc...  45.1    0.017 
gi|340626959|ref|YP_004745411.1|  hypothetical protein MCAN_19661...  44.3    0.025 
gi|289570036|ref|ZP_06450263.1|  conserved hypothetical protein [...  44.3    0.030 
gi|289762103|ref|ZP_06521481.1|  conserved hypothetical protein [...  44.3    0.031 
gi|31793141|ref|NP_855634.1|  hypothetical protein Mb1984c [Mycob...  44.3    0.031 
gi|15841420|ref|NP_336457.1|  hypothetical protein MT1999 [Mycoba...  43.9    0.034 
gi|15609086|ref|NP_216465.1|  hypothetical protein Rv1949c [Mycob...  43.9    0.034 
gi|118464060|ref|YP_880692.1|  hypothetical protein MAV_1450 [Myc...  41.6    0.16  
gi|289754650|ref|ZP_06514028.1|  conserved hypothetical protein [...  41.6    0.19  
gi|118470958|ref|YP_887993.1|  galactose-1-phosphate uridylyltran...  40.8    0.30  
gi|254774328|ref|ZP_05215844.1|  hypothetical protein MaviaA2_066...  40.4    0.38  
gi|118464941|ref|YP_880720.1|  hypothetical protein MAV_1479 [Myc...  39.7    0.60  


>gi|15607754|ref|NP_215128.1| hypothetical protein Rv0614 [Mycobacterium tuberculosis H37Rv]
 gi|31791797|ref|NP_854290.1| hypothetical protein Mb0631 [Mycobacterium bovis AF2122/97]
 gi|121636533|ref|YP_976756.1| hypothetical protein BCG_0661 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 25 more sequence titles
 Length=330

 Score =  655 bits (1689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 329/330 (99%), Positives = 330/330 (100%), Gaps = 0/330 (0%)

Query  1    LPAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA  60
            +PAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA
Sbjct  1    MPAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA  60

Query  61   ASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA  120
            ASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA
Sbjct  61   ASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA  120

Query  121  QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV  180
            QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV
Sbjct  121  QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV  180

Query  181  DVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ  240
            DVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ
Sbjct  181  DVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ  240

Query  241  SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE  300
            SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE
Sbjct  241  SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE  300

Query  301  TGAGVVAAAAGGVGAATAGVSLLQCLVGSK  330
            TGAGVVAAAAGGVGAATAGVSLLQCLVGSK
Sbjct  301  TGAGVVAAAAGGVGAATAGVSLLQCLVGSK  330


>gi|340625637|ref|YP_004744089.1| hypothetical protein MCAN_06161 [Mycobacterium canettii CIPT 
140010059]
 gi|340003827|emb|CCC42956.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=330

 Score =  647 bits (1670),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 327/330 (99%), Positives = 328/330 (99%), Gaps = 0/330 (0%)

Query  1    LPAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA  60
            +PAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA
Sbjct  1    MPAIPFQGEARAGRRPGRPRRCPAGVVRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAA  60

Query  61   ASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA  120
            ASRGLTSGTSR GWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA
Sbjct  61   ASRGLTSGTSRRGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQA  120

Query  121  QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV  180
            QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV
Sbjct  121  QTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLV  180

Query  181  DVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ  240
            DVKQDGGTSPPPPFAPWDTPDGT PPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ
Sbjct  181  DVKQDGGTSPPPPFAPWDTPDGTLPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQ  240

Query  241  SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE  300
            SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE
Sbjct  241  SLPANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAE  300

Query  301  TGAGVVAAAAGGVGAATAGVSLLQCLVGSK  330
            TGAGVVAAAAGGVGAATAGVSLLQCLVGSK
Sbjct  301  TGAGVVAAAAGGVGAATAGVSLLQCLVGSK  330


>gi|289568550|ref|ZP_06448777.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289756693|ref|ZP_06516071.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308231601|ref|ZP_07663890.1| hypothetical protein TMAG_02494 [Mycobacterium tuberculosis SUMu001]
 21 more sequence titles
 Length=304

 Score =  603 bits (1556),  Expect = 9e-171, Method: Compositional matrix adjust.
 Identities = 303/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%)

Query  27   VRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPT  86
            +RCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPT
Sbjct  1    MRCRPRSMGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPT  60

Query  87   RWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKIT  146
            RWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKIT
Sbjct  61   RWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKIT  120

Query  147  AATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPP  206
            AATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPP
Sbjct  121  AATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPP  180

Query  207  GTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADI  266
            GTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADI
Sbjct  181  GTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADI  240

Query  267  EYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCL  326
            EYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCL
Sbjct  241  EYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCL  300

Query  327  VGSK  330
            VGSK
Sbjct  301  VGSK  304


>gi|15840016|ref|NP_335053.1| hypothetical protein MT0644 [Mycobacterium tuberculosis CDC1551]
 gi|253797551|ref|YP_003030552.1| hypothetical protein TBMG_00622 [Mycobacterium tuberculosis KZN 
1435]
 gi|289552866|ref|ZP_06442076.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|13880160|gb|AAK44867.1| hypothetical protein MT0644 [Mycobacterium tuberculosis CDC1551]
 gi|253319053|gb|ACT23656.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289437498|gb|EFD19991.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|328457331|gb|AEB02754.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=297

 Score =  590 bits (1522),  Expect = 8e-167, Method: Compositional matrix adjust.
 Identities = 297/297 (100%), Positives = 297/297 (100%), Gaps = 0/297 (0%)

Query  34   MGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADG  93
            MGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADG
Sbjct  1    MGHVRPGFSPRLGSHRTLRPRWPPYAAASRGLTSGTSRWGWPRLGFGVVTAPTRWTLADG  60

Query  94   RELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIA  153
            RELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIA
Sbjct  61   RELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIA  120

Query  154  TTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPT  213
            TTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPT
Sbjct  121  TTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPPGTGLSPT  180

Query  214  LQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADIEYARTHC  273
            LQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADIEYARTHC
Sbjct  181  LQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQAHVADIEYARTHC  240

Query  274  STNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCLVGSK  330
            STNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCLVGSK
Sbjct  241  STNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVSLLQCLVGSK  297


>gi|289749113|ref|ZP_06508491.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689700|gb|EFD57129.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|323720969|gb|EGB30034.1| hypothetical protein TMMG_03320 [Mycobacterium tuberculosis CDC1551A]
Length=266

 Score =  525 bits (1353),  Expect = 3e-147, Method: Compositional matrix adjust.
 Identities = 265/266 (99%), Positives = 266/266 (100%), Gaps = 0/266 (0%)

Query  65   LTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA  124
            +TSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA
Sbjct  1    MTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA  60

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ  184
            GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ
Sbjct  61   GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ  120

Query  185  DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA  244
            DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA
Sbjct  121  DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA  180

Query  245  NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG  304
            NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG
Sbjct  181  NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG  240

Query  305  VVAAAAGGVGAATAGVSLLQCLVGSK  330
            VVAAAAGGVGAATAGVSLLQCLVGSK
Sbjct  241  VVAAAAGGVGAATAGVSLLQCLVGSK  266


>gi|326905163|gb|EGE52096.1| hypothetical protein TBPG_03095 [Mycobacterium tuberculosis W-148]
Length=346

 Score =  511 bits (1316),  Expect = 7e-143, Method: Compositional matrix adjust.
 Identities = 257/258 (99%), Positives = 258/258 (100%), Gaps = 0/258 (0%)

Query  65   LTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA  124
            +TSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA
Sbjct  1    MTSGTSRWGWPRLGFGVVTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFA  60

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ  184
            GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ
Sbjct  61   GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ  120

Query  185  DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA  244
            DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA
Sbjct  121  DGGTSPPPPFAPWDTPDGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPA  180

Query  245  NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG  304
            NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG
Sbjct  181  NDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAG  240

Query  305  VVAAAAGGVGAATAGVSL  322
            VVAAAAGGVGAATAGVSL
Sbjct  241  VVAAAAGGVGAATAGVSL  258


>gi|148821816|ref|YP_001286570.1| hypothetical protein TBFG_10625 [Mycobacterium tuberculosis F11]
 gi|167969039|ref|ZP_02551316.1| hypothetical protein MtubH3_13837 [Mycobacterium tuberculosis 
H37Ra]
 gi|254230950|ref|ZP_04924277.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 9 more sequence titles
 Length=249

 Score =  491 bits (1263),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 248/249 (99%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  82   VTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV  141
            +TAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV
Sbjct  1    MTAPTRWTLADGRELLFFSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV  60

Query  142  ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPD  201
            ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPD
Sbjct  61   ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPD  120

Query  202  GTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQA  261
            GTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQA
Sbjct  121  GTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQA  180

Query  262  HVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVS  321
            HVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVS
Sbjct  181  HVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGVS  240

Query  322  LLQCLVGSK  330
            LLQCLVGSK
Sbjct  241  LLQCLVGSK  249


>gi|240170349|ref|ZP_04749008.1| hypothetical protein MkanA1_13635 [Mycobacterium kansasii ATCC 
12478]
Length=346

 Score =  294 bits (752),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 152/250 (61%), Positives = 178/250 (72%), Gaps = 7/250 (2%)

Query  87   RWTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV  141
            ++ + D  E  F      S+    T+    E   R AQAQ FA DIR RA +LV ++ +V
Sbjct  98   KYKVQDAEEAGFSVSEDMSVYDTHTTANPVELADRQAQAQAFAEDIRLRAAKLVTADTDV  157

Query  142  ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGT-SPPPPFAPWDTP  200
            A K+TA  AGI    F E  + DDTIIG DN+  GV+LVD  QD    + PPPFAPWDTP
Sbjct  158  AQKVTATMAGIGPQAFGEPINADDTIIG-DNKHNGVQLVDFTQDNAAGTNPPPFAPWDTP  216

Query  201  DGTPPPGTGLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLPANDPNTAWLRGQVADLQ  260
            DGTPPPGTGLSP LQQM+LG +PA+LTGQGL +N+QRFVQSLP NDP TAWLRGQVADLQ
Sbjct  217  DGTPPPGTGLSPKLQQMLLGSNPASLTGQGLVENMQRFVQSLPENDPRTAWLRGQVADLQ  276

Query  261  AHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGAGVVAAAAGGVGAATAGV  320
            AHV DIEYARTHC+T DWI+RT+QFASG IV   G+L AETG G+  A AGGVG   AG 
Sbjct  277  AHVTDIEYARTHCTTRDWIERTSQFASGVIVTGYGLLAAETGVGLAVAGAGGVGTIIAGT  336

Query  321  SLLQCLVGSK  330
            +LL+CL GSK
Sbjct  337  NLLRCLTGSK  346


>gi|183980150|ref|YP_001848441.1| hypothetical protein MMAR_0116 [Mycobacterium marinum M]
 gi|183173476|gb|ACC38586.1| conserved hypothetical membrane protein [Mycobacterium marinum 
M]
Length=339

 Score =  246 bits (629),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 134/207 (65%), Positives = 156/207 (76%), Gaps = 5/207 (2%)

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ  184
            GDIR  A QL  ++ +VA ++TAATA +++  F + P I  T     +R+ GV+LVD KQ
Sbjct  137  GDIRLHARQLDGADAKVAGQLTAATADLSSVGFAQNP-IPATQAPTTHRN-GVQLVDFKQ  194

Query  185  DGGTSPPPPFAPWDTPDGTPPPGT-GLSPTLQQMILGGDPANLTGQGLADNVQRFVQSLP  243
            +GG   PPPFAPWDTPDGTPPPG  GLSP LQQMILGGDPANLTGQGL DN+Q+ VQSLP
Sbjct  195  NGG--EPPPFAPWDTPDGTPPPGAPGLSPELQQMILGGDPANLTGQGLLDNLQQLVQSLP  252

Query  244  ANDPNTAWLRGQVADLQAHVADIEYARTHCSTNDWIDRTAQFASGAIVFSIGVLTAETGA  303
             NDP TAWLRGQVADLQAH++DI+YARTHC+T+DW DRT  FASG +   I  LTAETG 
Sbjct  253  ENDPRTAWLRGQVADLQAHMSDIDYARTHCTTSDWFDRTTLFASGLVSTGILTLTAETGV  312

Query  304  GVVAAAAGGVGAATAGVSLLQCLVGSK  330
            G VAA A G G   AG +LL CLVGSK
Sbjct  313  GGVAAVASGFGTLVAGKNLLGCLVGSK  339


>gi|183984032|ref|YP_001852323.1| hypothetical protein MMAR_4061 [Mycobacterium marinum M]
 gi|183177358|gb|ACC42468.1| conserved hypothetical transmembrane protein [Mycobacterium marinum 
M]
Length=336

 Score =  105 bits (262),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 60/111 (55%), Positives = 73/111 (66%), Gaps = 3/111 (2%)

Query  99   FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP  158
             S+   R+SGTAAE+VARHAQAQ FAGDIR RA QL  +E +VA +++A  AG++   F 
Sbjct  111  LSVTDTRSSGTAAEQVARHAQAQAFAGDIRLRAEQLDAAEVKVAGQLSAIRAGLSGIGFA  170

Query  159  ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWDTPDGTPPPGTG  209
            E P  +       NR  G++ VD KQD G   PPPFAPWDT D TPPPG G
Sbjct  171  ENPIFNPVAHAPANR-IGIQPVDFKQDSGA--PPPFAPWDTADETPPPGKG  218


>gi|342860790|ref|ZP_08717440.1| hypothetical protein MCOL_18003 [Mycobacterium colombiense CECT 
3035]
 gi|342131814|gb|EGT85071.1| hypothetical protein MCOL_18003 [Mycobacterium colombiense CECT 
3035]
Length=356

 Score = 62.4 bits (150),  Expect = 9e-08, Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)

Query  99   FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP  158
             S+  P T G+ A+R  R AQAQ +AGDIRQRA QLV  +Q+VA ++T+A AGI   TFP
Sbjct  116  MSVTDPSTGGSTAQRATRRAQAQGYAGDIRQRATQLVALDQQVAERVTSAMAGI-RDTFP  174


>gi|41408570|ref|NP_961406.1| hypothetical protein MAP2472 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396928|gb|AAS04789.1| hypothetical protein MAP_2472 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=362

 Score = 57.4 bits (137),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 39/87 (45%), Positives = 52/87 (60%), Gaps = 9/87 (10%)

Query  107  SGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID--  164
            S + AER AR A+A+ FA DIR RA QL  ++ +VA+++TAATAG+  + F    S +  
Sbjct  118  STSPAERPARQAEAEAFAADIRLRAEQLDGADTKVAAQLTAATAGLGGSGFAPASSPNSN  177

Query  165  ------DTIIGNDNRDTGVRLVDVKQD  185
                  D      NR+ GVRLVD KQD
Sbjct  178  HGAAAADRTTPGSNRN-GVRLVDFKQD  203


>gi|336460919|gb|EGO39802.1| hypothetical protein MAPs_35850 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=362

 Score = 57.4 bits (137),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 39/87 (45%), Positives = 52/87 (60%), Gaps = 9/87 (10%)

Query  107  SGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID--  164
            S + AER AR A+A+ FA DIR RA QL  ++ +VA+++TAATAG+  + F    S +  
Sbjct  118  STSPAERPARQAEAEAFAADIRLRAEQLDGADTKVAAQLTAATAGLGGSGFAPASSPNSN  177

Query  165  ------DTIIGNDNRDTGVRLVDVKQD  185
                  D      NR+ GVRLVD KQD
Sbjct  178  HGAAAADRTTPGSNRN-GVRLVDFKQD  203


>gi|31791801|ref|NP_854294.1| galactose-1-phosphate uridylyltransferase GALT [Mycobacterium 
bovis AF2122/97]
 gi|31617388|emb|CAD93497.1| PROBABLE GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE GALT [Mycobacterium 
bovis AF2122/97]
Length=394

 Score = 53.9 bits (128),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)

Query  77   LGFGVVTAPTRWTLADGRELLFFSLPG  103
            +GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct  30   VGFCVVTAPTRWTLADGRDLLFFSLPG  56


>gi|340625641|ref|YP_004744093.1| galactose-1-phosphate uridylyltransferase [Mycobacterium canettii 
CIPT 140010059]
 gi|340003831|emb|CCC42960.1| galactose-1-phosphate uridylyltransferase [Mycobacterium canettii 
CIPT 140010059]
Length=394

 Score = 53.9 bits (128),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)

Query  77   LGFGVVTAPTRWTLADGRELLFFSLPG  103
            +GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct  30   VGFCVVTAPTRWTLADGRDLLFFSLPG  56


>gi|121636538|ref|YP_976761.1| putative galactose-1-phosphate uridylyltransferase galT [Mycobacterium 
bovis BCG str. Pasteur 1173P2]
 gi|224989010|ref|YP_002643697.1| putative galactose-1-phosphate uridylyltransferase [Mycobacterium 
bovis BCG str. Tokyo 172]
 gi|289442011|ref|ZP_06431755.1| galactose-1-phosphate uridylyltransferase [Mycobacterium tuberculosis 
T46]
 12 more sequence titles
 Length=394

 Score = 53.9 bits (128),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)

Query  77   LGFGVVTAPTRWTLADGRELLFFSLPG  103
            +GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct  30   VGFCVVTAPTRWTLADGRDLLFFSLPG  56


>gi|289749118|ref|ZP_06508496.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium 
tuberculosis T92]
 gi|289689705|gb|EFD57134.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium 
tuberculosis T92]
Length=221

 Score = 53.5 bits (127),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)

Query  77   LGFGVVTAPTRWTLADGRELLFFSLPG  103
            +GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct  49   VGFCVVTAPTRWTLADGRDLLFFSLPG  75


>gi|289752660|ref|ZP_06512038.1| LOW QUALITY PROTEIN: galactose-1-phosphate uridylyltransferase 
GALT [Mycobacterium tuberculosis EAS054]
 gi|289693247|gb|EFD60676.1| LOW QUALITY PROTEIN: galactose-1-phosphate uridylyltransferase 
GALT [Mycobacterium tuberculosis EAS054]
Length=232

 Score = 53.1 bits (126),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)

Query  77   LGFGVVTAPTRWTLADGRELLFFSLPG  103
            +GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct  30   VGFCVVTAPTRWTLADGRDLLFFSLPG  56


>gi|306806435|ref|ZP_07443103.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium 
tuberculosis SUMu007]
 gi|308377480|ref|ZP_07479296.2| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium 
tuberculosis SUMu009]
 gi|308347086|gb|EFP35937.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium 
tuberculosis SUMu007]
 gi|308355661|gb|EFP44512.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium 
tuberculosis SUMu009]
Length=231

 Score = 53.1 bits (126),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)

Query  77   LGFGVVTAPTRWTLADGRELLFFSLPG  103
            +GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct  30   VGFCVVTAPTRWTLADGRDLLFFSLPG  56


>gi|118466269|ref|YP_881458.1| hypothetical protein MAV_2254 [Mycobacterium avium 104]
 gi|118167556|gb|ABK68453.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=354

 Score = 53.1 bits (126),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 38/101 (38%), Positives = 51/101 (51%), Gaps = 22/101 (21%)

Query  124  AGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID-----DTIIGNDNR-----  173
            A DIR RA QL  ++ +V+ ++TAATAG++   F +  + +         GN  +     
Sbjct  135  AADIRLRAEQLDGADTKVSGQLTAATAGLSGGGFAQNSTSNRGGRAQNSSGNGGQPQPGH  194

Query  174  -----------DTGVRLVDVKQDGGTSP-PPPFAPWDTPDG  202
                         GVRLVD  QD  + P PPPFAPWD PDG
Sbjct  195  NAGQPQPATTNHNGVRLVDFTQDNASGPNPPPFAPWDNPDG  235


>gi|57116760|ref|YP_177741.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium 
tuberculosis H37Rv]
 gi|148660390|ref|YP_001281913.1| putative galactose-1-phosphate uridylyltransferase GalTa [Mycobacterium 
tuberculosis H37Ra]
 gi|148821820|ref|YP_001286574.1| galactose-1-phosphate uridylyltransferase galTa [Mycobacterium 
tuberculosis F11]
 40 more sequence titles
 Length=231

 Score = 53.1 bits (126),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 24/27 (89%), Positives = 26/27 (97%), Gaps = 0/27 (0%)

Query  77   LGFGVVTAPTRWTLADGRELLFFSLPG  103
            +GF VVTAPTRWTLADGR+LLFFSLPG
Sbjct  30   VGFCVVTAPTRWTLADGRDLLFFSLPG  56


>gi|340627558|ref|YP_004746010.1| hypothetical protein MCAN_25831 [Mycobacterium canettii CIPT 
140010059]
 gi|340005748|emb|CCC44914.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=361

 Score = 51.2 bits (121),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 33/98 (34%), Positives = 52/98 (54%), Gaps = 11/98 (11%)

Query  99   FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP  158
            +++    T G+  +R AR  QAQ  A  IR R   L+ +++E+A++++AAT G+    F 
Sbjct  19   YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDREIATRVSAATQGLDELAFE  78

Query  159  ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP  196
            E P +D         + GV+ VD +Q      PPP AP
Sbjct  79   EVPGVDTPA------EDGVQAVDFRQ-----APPPAAP  105


>gi|342858515|ref|ZP_08715170.1| hypothetical protein MCOL_06556 [Mycobacterium colombiense CECT 
3035]
 gi|342134219|gb|EGT87399.1| hypothetical protein MCOL_06556 [Mycobacterium colombiense CECT 
3035]
Length=358

 Score = 51.2 bits (121),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 35/83 (43%), Positives = 50/83 (61%), Gaps = 9/83 (10%)

Query  111  AERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP-------ETPSI  163
            AER AR  QA+ FA D+R RA QL  ++ +V+ ++TAATAG++   F         +P+ 
Sbjct  122  AERAARQTQAEAFAADLRLRAEQLEGADVKVSGQLTAATAGLSGGGFAPGSGSSHGSPAD  181

Query  164  DDTIIGNDNRDTGVRLVD-VKQD  185
              T  G+ NR+ G +LVD  KQD
Sbjct  182  HHTTPGS-NRNNGAKLVDYFKQD  203


>gi|41407431|ref|NP_960267.1| hypothetical protein MAP1333 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395783|gb|AAS03650.1| hypothetical protein MAP_1333 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=261

 Score = 51.2 bits (121),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 26/42 (62%), Positives = 33/42 (79%), Gaps = 1/42 (2%)

Query  123  FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID  164
            FAGDIR+RA +LV  +Q+VA ++TAATAGI   TFP+TP  D
Sbjct  140  FAGDIRRRAAELVALDQQVAGRVTAATAGI-RDTFPQTPDSD  180


>gi|183980511|ref|YP_001848802.1| hypothetical protein MMAR_0482 [Mycobacterium marinum M]
 gi|183173837|gb|ACC38947.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=371

 Score = 50.8 bits (120),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 34/76 (45%), Positives = 45/76 (60%), Gaps = 6/76 (7%)

Query  123  FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDV  182
            FAGD+RQRA QLV  + +VA+K+TAA AGI  ++FP+ P+     +GN      VR VD 
Sbjct  139  FAGDLRQRAAQLVGLDAQVATKVTAAVAGIG-SSFPQIPAPAAPPMGNP-----VRAVDN  192

Query  183  KQDGGTSPPPPFAPWD  198
            +      PP P  P D
Sbjct  193  RTFKQNPPPAPVDPKD  208


>gi|118464597|ref|YP_882327.1| hypothetical protein MAV_3143 [Mycobacterium avium 104]
 gi|118165884|gb|ABK66781.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=353

 Score = 50.8 bits (120),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 26/42 (62%), Positives = 33/42 (79%), Gaps = 1/42 (2%)

Query  123  FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID  164
            FAGDIR+RA +LV  +Q+VA ++TAATAGI   TFP+TP  D
Sbjct  137  FAGDIRRRAAELVALDQQVAGRVTAATAGI-RDTFPQTPDSD  177


>gi|254775594|ref|ZP_05217110.1| hypothetical protein MaviaA2_13128 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=298

 Score = 50.8 bits (120),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 26/42 (62%), Positives = 33/42 (79%), Gaps = 1/42 (2%)

Query  123  FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID  164
            FAGDIR+RA +LV  +Q+VA ++TAATAGI   TFP+TP  D
Sbjct  82   FAGDIRRRAAELVALDQQVAGRVTAATAGI-RDTFPQTPDSD  122


>gi|336457784|gb|EGO36778.1| hypothetical protein MAPs_18830 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=356

 Score = 50.8 bits (120),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 26/42 (62%), Positives = 33/42 (79%), Gaps = 1/42 (2%)

Query  123  FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID  164
            FAGDIR+RA +LV  +Q+VA ++TAATAGI   TFP+TP  D
Sbjct  140  FAGDIRRRAAELVALDQQVAGRVTAATAGI-RDTFPQTPDSD  180


>gi|118466271|ref|YP_880360.1| hypothetical protein MAV_1108 [Mycobacterium avium 104]
 gi|118167558|gb|ABK68455.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=348

 Score = 49.7 bits (117),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 31/56 (56%), Positives = 34/56 (61%), Gaps = 6/56 (10%)

Query  123  FAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPET-----PSIDDTIIGNDNR  173
             AGDIRQRA QLV  +QEVA KITAA AG+   TFP       PS D  + G DN 
Sbjct  127  LAGDIRQRAAQLVSLDQEVAGKITAAVAGV-RDTFPHDPTANRPSTDGHVRGVDNH  181


>gi|307085228|ref|ZP_07494341.1| hypothetical protein TMLG_02269 [Mycobacterium tuberculosis SUMu012]
 gi|308365183|gb|EFP54034.1| hypothetical protein TMLG_02269 [Mycobacterium tuberculosis SUMu012]
Length=446

 Score = 48.5 bits (114),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 31/98 (32%), Positives = 52/98 (54%), Gaps = 11/98 (11%)

Query  99   FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP  158
            +++    T G+  +R AR  QAQ  A  IR R   L+ +++++A++++AAT G+    F 
Sbjct  19   YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFE  78

Query  159  ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP  196
            + P +D         + GV+ VD +Q      PPP AP
Sbjct  79   DVPGVDTPA------EDGVQAVDFRQ-----APPPGAP  105


>gi|254551592|ref|ZP_05142039.1| hypothetical protein Mtube_14227 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=403

 Score = 48.5 bits (114),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 31/98 (32%), Positives = 52/98 (54%), Gaps = 11/98 (11%)

Query  99   FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP  158
            +++    T G+  +R AR  QAQ  A  IR R   L+ +++++A++++AAT G+    F 
Sbjct  19   YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFE  78

Query  159  ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP  196
            + P +D         + GV+ VD +Q      PPP AP
Sbjct  79   DVPGVDTPA------EDGVQAVDFRQ-----APPPGAP  105


>gi|31793724|ref|NP_856217.1| hypothetical protein Mb2571 [Mycobacterium bovis AF2122/97]
 gi|121638426|ref|YP_978650.1| hypothetical protein BCG_2564 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148823737|ref|YP_001288491.1| hypothetical protein TBFG_12562 [Mycobacterium tuberculosis F11]
 54 more sequence titles
 Length=403

 Score = 48.5 bits (114),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 31/98 (32%), Positives = 52/98 (54%), Gaps = 11/98 (11%)

Query  99   FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP  158
            +++    T G+  +R AR  QAQ  A  IR R   L+ +++++A++++AAT G+    F 
Sbjct  19   YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFE  78

Query  159  ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP  196
            + P +D         + GV+ VD +Q      PPP AP
Sbjct  79   DVPGVDTPA------EDGVQAVDFRQ-----APPPGAP  105


>gi|15609679|ref|NP_217058.1| hypothetical protein Rv2542 [Mycobacterium tuberculosis H37Rv]
 gi|148662380|ref|YP_001283903.1| hypothetical protein MRA_2570 [Mycobacterium tuberculosis H37Ra]
 gi|167968850|ref|ZP_02551127.1| hypothetical protein MtubH3_12785 [Mycobacterium tuberculosis 
H37Ra]
 gi|1781060|emb|CAB06196.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148506532|gb|ABQ74341.1| hypothetical protein MRA_2570 [Mycobacterium tuberculosis H37Ra]
Length=403

 Score = 48.5 bits (114),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 31/98 (32%), Positives = 52/98 (54%), Gaps = 11/98 (11%)

Query  99   FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFP  158
            +++    T G+  +R AR  QAQ  A  IR R   L+ +++++A++++AAT G+    F 
Sbjct  19   YTVTDRSTGGSRQQRAARLGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFE  78

Query  159  ETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP  196
            + P +D         + GV+ VD +Q      PPP AP
Sbjct  79   DVPGVDTPA------EDGVQAVDFRQ-----APPPGAP  105


>gi|254232663|ref|ZP_04925990.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|124601722|gb|EAY60732.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=398

 Score = 48.5 bits (114),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 31/91 (35%), Positives = 49/91 (54%), Gaps = 11/91 (12%)

Query  106  TSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDD  165
            T G+  +R AR  QAQ  A  IR R   L+ +++++A++++AAT G+    F + P +D 
Sbjct  21   TGGSRQQRAARVGQAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFEDVPGVDT  80

Query  166  TIIGNDNRDTGVRLVDVKQDGGTSPPPPFAP  196
                    + GV+ VD +Q      PPP AP
Sbjct  81   PA------EDGVQAVDFRQ-----APPPGAP  100


>gi|118616854|ref|YP_905186.1| hypothetical protein MUL_1133 [Mycobacterium ulcerans Agy99]
 gi|118568964|gb|ABL03715.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=314

 Score = 47.8 bits (112),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 48/117 (42%), Positives = 65/117 (56%), Gaps = 11/117 (9%)

Query  87   RWTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEV  141
            R+ + D +   F      S+    T G+AA+R AR AQAQ FAGD+ QRA QLV  + +V
Sbjct  41   RYAVTDAQAAGFQVEEDLSVTDRMTGGSAAQRAARQAQAQAFAGDLPQRAAQLVGLDAQV  100

Query  142  ASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQDGGTSPPPPFAPWD  198
            A+K+TAA AGI  ++FP+ P+     +GN      VR VD +      PP P  P D
Sbjct  101  ATKVTAAVAGIG-SSFPQIPAPAAPPMGNP-----VRAVDNRTFKQNPPPAPVDPKD  151


>gi|254821916|ref|ZP_05226917.1| galactose-1-phosphate uridylyltransferase [Mycobacterium intracellulare 
ATCC 13950]
Length=371

 Score = 47.4 bits (111),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 22/30 (74%), Positives = 25/30 (84%), Gaps = 0/30 (0%)

Query  76   RLGFGVVTAPTRWTLADGRELLFFSLPGPR  105
            +L F +VTAPTR  LADGR+LLFFSLPG R
Sbjct  5    KLVFDIVTAPTRAKLADGRDLLFFSLPGHR  34


>gi|118616488|ref|YP_904820.1| galactose-1-phosphate uridylyltransferase, GalT [Mycobacterium 
ulcerans Agy99]
 gi|118568598|gb|ABL03349.1| galactose-1-phosphate uridylyltransferase, GalT [Mycobacterium 
ulcerans Agy99]
Length=385

 Score = 46.2 bits (108),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 21/28 (75%), Positives = 24/28 (86%), Gaps = 0/28 (0%)

Query  76   RLGFGVVTAPTRWTLADGRELLFFSLPG  103
            RL F +VTAPTR  LADGRE+LFF+LPG
Sbjct  22   RLVFDIVTAPTRAKLADGREVLFFALPG  49


>gi|296164510|ref|ZP_06847081.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900110|gb|EFG79545.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=406

 Score = 45.8 bits (107),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 35/78 (45%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVRLVDVKQ  184
             DIRQRA QLV  +Q+VA K+TAATAGI   TFP  P            +  VR VD   
Sbjct  142  ADIRQRAAQLVALDQQVAGKVTAATAGI-RDTFPPDPG-----AATSPHEPEVRAVDNHT  195

Query  185  DGGTSPPP-----PFAPW  197
                 PPP     PFA W
Sbjct  196  FQRDPPPPGSTDNPFAGW  213


>gi|118464810|ref|YP_882824.1| hypothetical protein MAV_3647 [Mycobacterium avium 104]
 gi|118166097|gb|ABK66994.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=235

 Score = 45.1 bits (105),  Expect = 0.017, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 36/56 (65%), Gaps = 0/56 (0%)

Query  99   FSLPGPRTSGTAAERVARHAQAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIAT  154
             S+   R+S T A+  AR A+A+ FAGDIR RA QL   +++VA ++T  TA + T
Sbjct  111  LSVTDTRSSTTPADHAARQARAEAFAGDIRARAEQLEGVDRKVARELTTTTADLGT  166


>gi|340626959|ref|YP_004745411.1| hypothetical protein MCAN_19661 [Mycobacterium canettii CIPT 
140010059]
 gi|340005149|emb|CCC44298.1| putative uncharacterized protein flags: fragment [Mycobacterium 
canettii CIPT 140010059]
Length=371

 Score = 44.3 bits (103),  Expect = 0.025, Method: Compositional matrix adjust.
 Identities = 45/97 (47%), Positives = 53/97 (55%), Gaps = 8/97 (8%)

Query  73   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  124
            G  R G G + A  R   + + D     F      S+   RTS TAAE+ AR AQAQ  A
Sbjct  77   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTAAEQAARQAQAQALA  136

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  161
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  137  GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  173


>gi|289570036|ref|ZP_06450263.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289543790|gb|EFD47438.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=318

 Score = 44.3 bits (103),  Expect = 0.030, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  73   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  124
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  24   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  83

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  161
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  84   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  120


>gi|289762103|ref|ZP_06521481.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289709609|gb|EFD73625.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=318

 Score = 44.3 bits (103),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  73   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  124
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  24   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  83

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  161
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  84   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  120


>gi|31793141|ref|NP_855634.1| hypothetical protein Mb1984c [Mycobacterium bovis AF2122/97]
 gi|121637854|ref|YP_978077.1| hypothetical protein BCG_1988c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224990338|ref|YP_002645025.1| hypothetical protein JTY_1972 [Mycobacterium bovis BCG str. Tokyo 
172]
 16 more sequence titles
 Length=300

 Score = 44.3 bits (103),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  73   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  124
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  6    GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  65

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  161
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  66   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  102


>gi|15841420|ref|NP_336457.1| hypothetical protein MT1999 [Mycobacterium tuberculosis CDC1551]
 gi|148661757|ref|YP_001283280.1| hypothetical protein MRA_1959 [Mycobacterium tuberculosis H37Ra]
 gi|148823161|ref|YP_001287915.1| hypothetical protein TBFG_11978 [Mycobacterium tuberculosis F11]
 48 more sequence titles
 Length=300

 Score = 43.9 bits (102),  Expect = 0.034, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  73   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  124
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  6    GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  65

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  161
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  66   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  102


>gi|15609086|ref|NP_216465.1| hypothetical protein Rv1949c [Mycobacterium tuberculosis H37Rv]
 gi|1806213|emb|CAB06512.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|326903555|gb|EGE50488.1| LOW QUALITY PROTEIN: hypothetical protein TBPG_01431 [Mycobacterium 
tuberculosis W-148]
Length=319

 Score = 43.9 bits (102),  Expect = 0.034, Method: Compositional matrix adjust.
 Identities = 44/97 (46%), Positives = 52/97 (54%), Gaps = 8/97 (8%)

Query  73   GWPRLGFGVVTAPTR---WTLADGRELLF-----FSLPGPRTSGTAAERVARHAQAQTFA  124
            G  R G G + A  R   + + D     F      S+   RTS T AE+ AR AQAQ  A
Sbjct  25   GLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALA  84

Query  125  GDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETP  161
            GDIRQRA QL+  E EVA+KI  ATA + T  F E P
Sbjct  85   GDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPP  121


>gi|118464060|ref|YP_880692.1| hypothetical protein MAV_1450 [Mycobacterium avium 104]
 gi|118165347|gb|ABK66244.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=353

 Score = 41.6 bits (96),  Expect = 0.16, Method: Compositional matrix adjust.
 Identities = 33/84 (40%), Positives = 41/84 (49%), Gaps = 15/84 (17%)

Query  124  AGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDD-----TIIGNDNRDT---  175
            A DIR RA QL  ++ +VA ++TAATAG+    F    S +         G  NR +   
Sbjct  135  AADIRLRAEQLDGADTKVAGQLTAATAGLGGDGFAPASSHNSRQPSAQKDGGQNRRSTSG  194

Query  176  -------GVRLVDVKQDGGTSPPP  192
                   GV LVD KQDGG  P P
Sbjct  195  VPNSQRGGVHLVDFKQDGGADPSP  218


>gi|289754650|ref|ZP_06514028.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289695237|gb|EFD62666.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=367

 Score = 41.6 bits (96),  Expect = 0.19, Method: Compositional matrix adjust.
 Identities = 26/78 (34%), Positives = 42/78 (54%), Gaps = 11/78 (14%)

Query  119  QAQTFAGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSIDDTIIGNDNRDTGVR  178
            QAQ  A  IR R   L+ +++++A++++AAT G+    F + P +D         + GV+
Sbjct  3    QAQGHADFIRHRVGALLATDRDIATRVSAATQGLDELAFEDVPGVDTPA------EDGVQ  56

Query  179  LVDVKQDGGTSPPPPFAP  196
             VD +Q      PPP AP
Sbjct  57   AVDFRQ-----APPPGAP  69


>gi|118470958|ref|YP_887993.1| galactose-1-phosphate uridylyltransferase [Mycobacterium smegmatis 
str. MC2 155]
 gi|118172245|gb|ABK73141.1| galactose-1-phosphate uridylyltransferase [Mycobacterium smegmatis 
str. MC2 155]
Length=360

 Score = 40.8 bits (94),  Expect = 0.30, Method: Compositional matrix adjust.
 Identities = 17/22 (78%), Positives = 19/22 (87%), Gaps = 0/22 (0%)

Query  82   VTAPTRWTLADGRELLFFSLPG  103
            +T P RWTLADGRE L+FSLPG
Sbjct  1    MTQPLRWTLADGREQLYFSLPG  22


>gi|254774328|ref|ZP_05215844.1| hypothetical protein MaviaA2_06625 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=362

 Score = 40.4 bits (93),  Expect = 0.38, Method: Compositional matrix adjust.
 Identities = 30/70 (43%), Positives = 40/70 (58%), Gaps = 9/70 (12%)

Query  124  AGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID--------DTIIGNDNRDT  175
            A DIR RA QL  ++ +VA+++TAATAG+  + F    S +        D      NR+ 
Sbjct  135  AADIRLRAEQLDGADTKVAAQLTAATAGLGGSGFAPASSPNSNHGAAAADRTTPGSNRN-  193

Query  176  GVRLVDVKQD  185
            GVRLVD KQD
Sbjct  194  GVRLVDFKQD  203


>gi|118464941|ref|YP_880720.1| hypothetical protein MAV_1479 [Mycobacterium avium 104]
 gi|118166228|gb|ABK67125.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=362

 Score = 39.7 bits (91),  Expect = 0.60, Method: Compositional matrix adjust.
 Identities = 30/70 (43%), Positives = 39/70 (56%), Gaps = 9/70 (12%)

Query  124  AGDIRQRAIQLVVSEQEVASKITAATAGIATTTFPETPSID--------DTIIGNDNRDT  175
            A DIR RA QL  ++ +VA ++TAATAG+  + F    S +        D      NR+ 
Sbjct  135  AADIRLRAEQLDGADTKVAGQLTAATAGLGGSGFAPASSPNSNHGAAAADRTTPGSNRN-  193

Query  176  GVRLVDVKQD  185
            GVRLVD KQD
Sbjct  194  GVRLVDFKQD  203



Lambda     K      H
   0.318    0.134    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 586667724920




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40