BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0616A

Length=75
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15840019|ref|NP_335056.1|  hypothetical protein MT0645.2 [Myco...   146    1e-33
gi|240169387|ref|ZP_04748046.1|  hypothetical protein MkanA1_0874...   112    2e-23
gi|336179655|ref|YP_004585030.1|  hypothetical protein FsymDg_383...  94.7    4e-18
gi|86738905|ref|YP_479305.1|  hypothetical protein Francci3_0184 ...  72.0    3e-11
gi|307701615|ref|ZP_07638631.1|  conserved hypothetical protein [...  41.2    0.049
gi|87123103|ref|ZP_01078954.1|  hypothetical protein RS9917_04570...  41.2    0.054
gi|33864608|ref|NP_896167.1|  hypothetical protein SYNW0072 [Syne...  39.7    0.14 
gi|114331351|ref|YP_747573.1|  hypothetical protein Neut_1360 [Ni...  38.5    0.30 
gi|87123267|ref|ZP_01079118.1|  hypothetical protein RS9917_05390...  37.7    0.62 
gi|241518560|ref|YP_002979188.1|  hypothetical protein Rleg_5863 ...  37.4    0.74 
gi|227876600|ref|ZP_03994710.1|  hypothetical protein HMPREF0577_...  37.4    0.83 
gi|335436292|ref|ZP_08559091.1|  hypothetical protein HLRTI_04337...  36.2    1.5  
gi|218458497|ref|ZP_03498588.1|  hypothetical protein RetlK5_0316...  35.8    2.1  
gi|15842141|ref|NP_337178.1|  hypothetical protein MT2676 [Mycoba...  35.4    2.6  
gi|15842065|ref|NP_337102.1|  hypothetical protein MT2606 [Mycoba...  35.0    4.0  
gi|344220429|gb|AEN01060.1|  hypothetical protein MTCTRI2_2650 [M...  34.7    4.4  
gi|304389553|ref|ZP_07371515.1|  conserved hypothetical protein [...  34.7    4.8  
gi|340627507|ref|YP_004745959.1|  hypothetical protein MCAN_25321...  34.7    5.1  
gi|298346744|ref|YP_003719431.1|  hypothetical protein HMPREF0573...  34.7    5.3  
gi|15609630|ref|NP_217009.1|  hypothetical protein Rv2493 [Mycoba...  34.3    6.4  
gi|196230684|ref|ZP_03129545.1|  conserved hypothetical protein [...  33.9    7.9  


>gi|15840019|ref|NP_335056.1| hypothetical protein MT0645.2 [Mycobacterium tuberculosis CDC1551]
 gi|121636536|ref|YP_976759.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|167969042|ref|ZP_02551319.1| hypothetical protein MtubH3_13852 [Mycobacterium tuberculosis 
H37Ra]
 56 more sequence titles
 
gi|224989008|ref|YP_002643695.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|253797554|ref|YP_003030555.1| antitoxin [Mycobacterium tuberculosis KZN 1435]
 gi|254549574|ref|ZP_05140021.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289442008|ref|ZP_06431752.1| antitoxin [Mycobacterium tuberculosis T46]
 gi|289446171|ref|ZP_06435915.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289552869|ref|ZP_06442079.1| antitoxin [Mycobacterium tuberculosis KZN 605]
 gi|289568553|ref|ZP_06448780.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289573218|ref|ZP_06453445.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289749115|ref|ZP_06508493.1| antitoxin [Mycobacterium tuberculosis T92]
 gi|289752657|ref|ZP_06512035.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289756696|ref|ZP_06516074.1| antitoxin [Mycobacterium tuberculosis T85]
 gi|289760739|ref|ZP_06520117.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294996130|ref|ZP_06801821.1| antitoxin [Mycobacterium tuberculosis 210]
 gi|297633112|ref|ZP_06950892.1| antitoxin [Mycobacterium tuberculosis KZN 4207]
 gi|297730090|ref|ZP_06959208.1| antitoxin [Mycobacterium tuberculosis KZN R506]
 gi|306774722|ref|ZP_07413059.1| antitoxin [Mycobacterium tuberculosis SUMu001]
 gi|306783260|ref|ZP_07421582.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|306787631|ref|ZP_07425953.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 gi|306794396|ref|ZP_07432698.1| antitoxin [Mycobacterium tuberculosis SUMu005]
 gi|306796365|ref|ZP_07434667.1| antitoxin [Mycobacterium tuberculosis SUMu006]
 gi|306802226|ref|ZP_07438894.1| antitoxin [Mycobacterium tuberculosis SUMu008]
 gi|306806433|ref|ZP_07443101.1| antitoxin [Mycobacterium tuberculosis SUMu007]
 gi|306966633|ref|ZP_07479294.1| antitoxin [Mycobacterium tuberculosis SUMu009]
 gi|306970826|ref|ZP_07483487.1| antitoxin [Mycobacterium tuberculosis SUMu010]
 gi|307078549|ref|ZP_07487719.1| antitoxin [Mycobacterium tuberculosis SUMu011]
 gi|307083114|ref|ZP_07492227.1| antitoxin [Mycobacterium tuberculosis SUMu012]
 gi|313657417|ref|ZP_07814297.1| antitoxin [Mycobacterium tuberculosis KZN V2475]
 gi|332321845|sp|P0CW34.1|VPB29_MYCTU RecName: Full=Putative antitoxin VapB29
 gi|13880163|gb|AAK44870.1| hypothetical protein MT0645.2 [Mycobacterium tuberculosis CDC1551]
 gi|121492183|emb|CAL70649.1| Conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|224772121|dbj|BAH24927.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|253319056|gb|ACT23659.1| antitoxin [Mycobacterium tuberculosis KZN 1435]
 gi|289414927|gb|EFD12167.1| antitoxin [Mycobacterium tuberculosis T46]
 gi|289419129|gb|EFD16330.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289437501|gb|EFD19994.1| antitoxin [Mycobacterium tuberculosis KZN 605]
 gi|289537649|gb|EFD42227.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289542307|gb|EFD45955.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289689702|gb|EFD57131.1| antitoxin [Mycobacterium tuberculosis T92]
 gi|289693244|gb|EFD60673.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289708245|gb|EFD72261.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289712260|gb|EFD76272.1| antitoxin [Mycobacterium tuberculosis T85]
 gi|308216618|gb|EFO76017.1| antitoxin [Mycobacterium tuberculosis SUMu001]
 gi|308331924|gb|EFP20775.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|308335711|gb|EFP24562.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 gi|308337290|gb|EFP26141.1| antitoxin [Mycobacterium tuberculosis SUMu005]
 gi|308343216|gb|EFP32067.1| antitoxin [Mycobacterium tuberculosis SUMu006]
 gi|308347084|gb|EFP35935.1| antitoxin [Mycobacterium tuberculosis SUMu007]
 gi|308351027|gb|EFP39878.1| antitoxin [Mycobacterium tuberculosis SUMu008]
 gi|308355659|gb|EFP44510.1| antitoxin [Mycobacterium tuberculosis SUMu009]
 gi|308359614|gb|EFP48465.1| antitoxin [Mycobacterium tuberculosis SUMu010]
 gi|308363542|gb|EFP52393.1| antitoxin [Mycobacterium tuberculosis SUMu011]
 gi|308367172|gb|EFP56023.1| antitoxin [Mycobacterium tuberculosis SUMu012]
 gi|323720971|gb|EGB30036.1| antitoxin [Mycobacterium tuberculosis CDC1551A]
 gi|326905162|gb|EGE52095.1| antitoxin [Mycobacterium tuberculosis W-148]
 gi|328457334|gb|AEB02757.1| antitoxin [Mycobacterium tuberculosis KZN 4207]
 gi|341600552|emb|CCC63222.1| conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Moreau RDJ]
Length=75

 Score =  146 bits (368),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 74/75 (99%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSVG  60
           +RTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSVG
Sbjct  1   MRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSVG  60

Query  61  TVVTSEDVRSLEDEQ  75
           TVVTSEDVRSLEDEQ
Sbjct  61  TVVTSEDVRSLEDEQ  75


>gi|240169387|ref|ZP_04748046.1| hypothetical protein MkanA1_08743 [Mycobacterium kansasii ATCC 
12478]
Length=75

 Score =  112 bits (280),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 62/75 (83%), Positives = 67/75 (90%), Gaps = 0/75 (0%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSVG  60
           +RTTIDLP DLHKQALAIARDT RTLSETVADLMRRGL A    A+S+DPRTGLPLV+VG
Sbjct  1   MRTTIDLPDDLHKQALAIARDTRRTLSETVADLMRRGLGAGGAAAISTDPRTGLPLVNVG  60

Query  61  TVVTSEDVRSLEDEQ  75
            VVTSEDVRSLEDE+
Sbjct  61  KVVTSEDVRSLEDEE  75


>gi|336179655|ref|YP_004585030.1| hypothetical protein FsymDg_3832 [Frankia symbiont of Datisca 
glomerata]
 gi|334860635|gb|AEH11109.1| hypothetical protein, antitoxin [Frankia symbiont of Datisca 
glomerata]
Length=84

 Score = 94.7 bits (234),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 47/75 (63%), Positives = 61/75 (82%), Gaps = 0/75 (0%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSVG  60
           +RTTIDL  DLH+QAL+IAR T RTLS+TVADL+RRGL  +    +S   RTGLP+V +G
Sbjct  1   MRTTIDLSDDLHRQALSIARGTRRTLSDTVADLIRRGLGQSGAAEVSRSERTGLPVVRLG  60

Query  61  TVVTSEDVRSLEDEQ  75
           TV+TSEDVR+++D+Q
Sbjct  61  TVITSEDVRAMDDDQ  75


>gi|86738905|ref|YP_479305.1| hypothetical protein Francci3_0184 [Frankia sp. CcI3]
 gi|86565767|gb|ABD09576.1| hypothetical protein Francci3_0184 [Frankia sp. CcI3]
Length=184

 Score = 72.0 bits (175),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 34/44 (78%), Positives = 38/44 (87%), Gaps = 0/44 (0%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPT  44
           +RTTIDLP DLH+QA++IARDT RTLSET ADLMRRGL   RPT
Sbjct  1   MRTTIDLPDDLHRQAMSIARDTSRTLSETAADLMRRGLGQGRPT  44


>gi|307701615|ref|ZP_07638631.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
 gi|307613118|gb|EFN92371.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
Length=88

 Score = 41.2 bits (95),  Expect = 0.049, Method: Compositional matrix adjust.
 Identities = 25/74 (34%), Positives = 41/74 (56%), Gaps = 6/74 (8%)

Query  4   TIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAA---NRPTA---LSSDPRTGLPLV  57
           T++LP DL  +   +AR+     S+  A  +R G+A+   N+PT    +  DP TG   +
Sbjct  4   TVELPPDLSAKVSQLARERGIKGSDLAASFIREGIASAQPNQPTPPFRIVKDPETGWSSL  63

Query  58  SVGTVVTSEDVRSL  71
           S+G  VTS +V++ 
Sbjct  64  SLGRTVTSAEVKAF  77


>gi|87123103|ref|ZP_01078954.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
 gi|86168823|gb|EAQ70079.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
Length=79

 Score = 41.2 bits (95),  Expect = 0.054, Method: Compositional matrix adjust.
 Identities = 29/80 (37%), Positives = 43/80 (54%), Gaps = 7/80 (8%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDP--RTGLPLVS  58
           +RTT+ L  D+   A  +AR  H ++ E +++L R+ L   RP  L   P  R+GLPL+ 
Sbjct  1   MRTTLQLDDDVLDAARVLARQQHLSVGEVISELARQAL--RRPAGLEEPPSERSGLPLLP  58

Query  59  V---GTVVTSEDVRSLEDEQ  75
           +   G VV    V  L DE+
Sbjct  59  IKSSGGVVDLNLVNQLRDEE  78


>gi|33864608|ref|NP_896167.1| hypothetical protein SYNW0072 [Synechococcus sp. WH 8102]
 gi|33632131|emb|CAE06587.1| hypothetical protein SYNW0072 [Synechococcus sp. WH 8102]
Length=102

 Score = 39.7 bits (91),  Expect = 0.14, Method: Compositional matrix adjust.
 Identities = 33/86 (39%), Positives = 46/86 (54%), Gaps = 15/86 (17%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDP---------R  51
           ++TTIDLP  L +QA   A    RTL + +AD +R+GL   + T+LS+ P          
Sbjct  1   MKTTIDLPDALIQQAKQRALQQKRTLKDLIADYIRQGL---KGTSLSAMPAASSLVETDA  57

Query  52  TGLPLV---SVGTVVTSEDVRSLEDE  74
           TGLPL+   S  TV T  +   LE +
Sbjct  58  TGLPLIRSTSAPTVHTVPNALQLEQD  83


>gi|114331351|ref|YP_747573.1| hypothetical protein Neut_1360 [Nitrosomonas eutropha C91]
 gi|114308365|gb|ABI59608.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
Length=92

 Score = 38.5 bits (88),  Expect = 0.30, Method: Compositional matrix adjust.
 Identities = 27/79 (35%), Positives = 43/79 (55%), Gaps = 4/79 (5%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSD---PRTGL-PL  56
           VRTTID+  D+   A  IAR  + ++ + ++ L+R+ LA +     S D     TG  P 
Sbjct  12  VRTTIDIENDVLAAAKEIARTENVSVGKVISRLVRQALAGHVAEVSSPDDASSVTGFRPF  71

Query  57  VSVGTVVTSEDVRSLEDEQ  75
            S G +V++E +  L DE+
Sbjct  72  PSRGVIVSNELINRLRDEE  90


>gi|87123267|ref|ZP_01079118.1| hypothetical protein RS9917_05390 [Synechococcus sp. RS9917]
 gi|86168987|gb|EAQ70243.1| hypothetical protein RS9917_05390 [Synechococcus sp. RS9917]
Length=102

 Score = 37.7 bits (86),  Expect = 0.62, Method: Compositional matrix adjust.
 Identities = 32/83 (39%), Positives = 41/83 (50%), Gaps = 9/83 (10%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGL----AANRPTA--LSSDPRTGL  54
           ++TTIDLP  L +QA   A    RTL + +AD +R+GL        P A  L     TGL
Sbjct  1   MKTTIDLPDALIQQAKQRALQQKRTLKDLIADYIRQGLKGPSCGTSPAASILVETDATGL  60

Query  55  PLV---SVGTVVTSEDVRSLEDE  74
           PL+      TV T  D   LE +
Sbjct  61  PLIRSTRAPTVHTVPDALQLEQD  83


>gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 [Rhizobium leguminosarum bv. trifolii 
WSM1325]
 gi|240862973|gb|ACS60637.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii 
WSM1325]
Length=75

 Score = 37.4 bits (85),  Expect = 0.74, Method: Compositional matrix adjust.
 Identities = 29/77 (38%), Positives = 43/77 (56%), Gaps = 7/77 (9%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSV-  59
           +RTT+ +  D+   A A+A   HR++ E +++L RR L   RP   SS  R G+PL+S  
Sbjct  1   MRTTLAIDDDVLTAAKAMATQQHRSVGEVISELARRSL--RRPP--SSGERNGIPLLSTR  56

Query  60  --GTVVTSEDVRSLEDE  74
                VT E V ++ DE
Sbjct  57  PDTPPVTLEIVNAMRDE  73


>gi|227876600|ref|ZP_03994710.1| hypothetical protein HMPREF0577_2011 [Mobiluncus mulieris ATCC 
35243]
 gi|227842801|gb|EEJ53000.1| hypothetical protein HMPREF0577_2011 [Mobiluncus mulieris ATCC 
35243]
Length=88

 Score = 37.4 bits (85),  Expect = 0.83, Method: Compositional matrix adjust.
 Identities = 22/74 (30%), Positives = 38/74 (52%), Gaps = 6/74 (8%)

Query  4   TIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANR------PTALSSDPRTGLPLV  57
           T++LP DL ++   +A       S+  A  +R G+ + +      P  +  DP TG   +
Sbjct  4   TVELPPDLAEKVSQLASARGVDFSDLAASFIREGIVSAQSTPVHPPFRVVKDPNTGWSSL  63

Query  58  SVGTVVTSEDVRSL  71
           S+G VVTS +V++ 
Sbjct  64  SLGRVVTSAEVKTF  77


>gi|335436292|ref|ZP_08559091.1| hypothetical protein HLRTI_04337 [Halorhabdus tiamatea SARL4B]
 gi|335438970|ref|ZP_08561697.1| hypothetical protein HLRTI_17470 [Halorhabdus tiamatea SARL4B]
 gi|334889320|gb|EGM27606.1| hypothetical protein HLRTI_17470 [Halorhabdus tiamatea SARL4B]
 gi|334897905|gb|EGM36030.1| hypothetical protein HLRTI_04337 [Halorhabdus tiamatea SARL4B]
Length=47

 Score = 36.2 bits (82),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 16/38 (43%), Positives = 23/38 (61%), Gaps = 0/38 (0%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGL  38
           +R  +D+P  LH Q    A DT +TL+E   +L+R GL
Sbjct  1   MRPNVDIPWSLHGQVKEWAEDTDQTLTEAYIELVRTGL  38


>gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_03168 [Rhizobium etli Kim 5]
Length=63

 Score = 35.8 bits (81),  Expect = 2.1, Method: Compositional matrix adjust.
 Identities = 23/58 (40%), Positives = 35/58 (61%), Gaps = 4/58 (6%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVS  58
           +RTT+ +  D+   A A+A   HR++ E +++L RR L   RP   SS  R G+PL+S
Sbjct  7   MRTTLAIDDDVLIAAKAMATQQHRSVGEVISELARRSL--RRPP--SSGERNGIPLLS  60


>gi|15842141|ref|NP_337178.1| hypothetical protein MT2676 [Mycobacterium tuberculosis CDC1551]
 gi|31793786|ref|NP_856279.1| hypothetical protein Mb2633 [Mycobacterium bovis AF2122/97]
 gi|57117004|ref|YP_177673.1| hypothetical protein Rv2601A [Mycobacterium tuberculosis H37Rv]
 74 more sequence titles
 
gi|121638488|ref|YP_978712.1| hypothetical protein BCG_2626 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148662441|ref|YP_001283964.1| hypothetical protein MRA_2629A [Mycobacterium tuberculosis H37Ra]
 gi|167967076|ref|ZP_02549353.1| hypothetical protein MtubH3_03095 [Mycobacterium tuberculosis 
H37Ra]
 gi|224990982|ref|YP_002645669.1| hypothetical protein JTY_2620 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253798316|ref|YP_003031317.1| antitoxin [Mycobacterium tuberculosis KZN 1435]
 gi|254232720|ref|ZP_04926047.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254365271|ref|ZP_04981316.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254551653|ref|ZP_05142100.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289444141|ref|ZP_06433885.1| antitoxin [Mycobacterium tuberculosis T46]
 gi|289448252|ref|ZP_06437996.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289553609|ref|ZP_06442819.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289570773|ref|ZP_06451000.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575312|ref|ZP_06455539.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289746395|ref|ZP_06505773.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751226|ref|ZP_06510604.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754721|ref|ZP_06514099.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758732|ref|ZP_06518110.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289762775|ref|ZP_06522153.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294994289|ref|ZP_06799980.1| antitoxin [Mycobacterium tuberculosis 210]
 gi|297635212|ref|ZP_06952992.1| antitoxin [Mycobacterium tuberculosis KZN 4207]
 gi|297732205|ref|ZP_06961323.1| antitoxin [Mycobacterium tuberculosis KZN R506]
 gi|298526077|ref|ZP_07013486.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306776876|ref|ZP_07415213.1| antitoxin [Mycobacterium tuberculosis SUMu001]
 gi|306780640|ref|ZP_07418977.1| antitoxin [Mycobacterium tuberculosis SUMu002]
 gi|306785404|ref|ZP_07423726.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|306790004|ref|ZP_07428326.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 gi|306794085|ref|ZP_07432387.1| antitoxin [Mycobacterium tuberculosis SUMu005]
 gi|306798499|ref|ZP_07436801.1| antitoxin [Mycobacterium tuberculosis SUMu006]
 gi|306804362|ref|ZP_07441030.1| antitoxin [Mycobacterium tuberculosis SUMu008]
 gi|306807598|ref|ZP_07444266.1| antitoxin [Mycobacterium tuberculosis SUMu007]
 gi|306969800|ref|ZP_07482461.1| antitoxin [Mycobacterium tuberculosis SUMu009]
 gi|306972991|ref|ZP_07485652.1| antitoxin [Mycobacterium tuberculosis SUMu010]
 gi|307080701|ref|ZP_07489871.1| antitoxin [Mycobacterium tuberculosis SUMu011]
 gi|307085290|ref|ZP_07494403.1| antitoxin [Mycobacterium tuberculosis SUMu012]
 gi|313659540|ref|ZP_07816420.1| antitoxin [Mycobacterium tuberculosis KZN V2475]
 gi|339632630|ref|YP_004724272.1| hypothetical protein MAF_26190 [Mycobacterium africanum GM041182]
 gi|81764236|sp|Q8VJF3.1|VPB41_MYCTU RecName: Full=Antitoxin VapB41
 gi|13882426|gb|AAK46992.1| hypothetical protein MT2676 [Mycobacterium tuberculosis CDC1551]
 gi|31619380|emb|CAD94818.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|41353432|emb|CAE55503.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|121494136|emb|CAL72614.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124601779|gb|EAY60789.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134150784|gb|EBA42829.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148506593|gb|ABQ74402.1| hypothetical protein MRA_2629A [Mycobacterium tuberculosis H37Ra]
 gi|224774095|dbj|BAH26901.1| hypothetical protein JTY_2620 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253319819|gb|ACT24422.1| antitoxin [Mycobacterium tuberculosis KZN 1435]
 gi|289417060|gb|EFD14300.1| antitoxin [Mycobacterium tuberculosis T46]
 gi|289421210|gb|EFD18411.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289438241|gb|EFD20734.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289539743|gb|EFD44321.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289544527|gb|EFD48175.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686923|gb|EFD54411.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691813|gb|EFD59242.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695308|gb|EFD62737.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710281|gb|EFD74297.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289714296|gb|EFD78308.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298495871|gb|EFI31165.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308214731|gb|EFO74130.1| antitoxin [Mycobacterium tuberculosis SUMu001]
 gi|308326471|gb|EFP15322.1| antitoxin [Mycobacterium tuberculosis SUMu002]
 gi|308329923|gb|EFP18774.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|308333538|gb|EFP22389.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 gi|308337565|gb|EFP26416.1| antitoxin [Mycobacterium tuberculosis SUMu005]
 gi|308341232|gb|EFP30083.1| antitoxin [Mycobacterium tuberculosis SUMu006]
 gi|308345994|gb|EFP34845.1| antitoxin [Mycobacterium tuberculosis SUMu007]
 gi|308349039|gb|EFP37890.1| antitoxin [Mycobacterium tuberculosis SUMu008]
 gi|308352717|gb|EFP41568.1| antitoxin [Mycobacterium tuberculosis SUMu009]
 gi|308357607|gb|EFP46458.1| antitoxin [Mycobacterium tuberculosis SUMu010]
 gi|308361549|gb|EFP50400.1| antitoxin [Mycobacterium tuberculosis SUMu011]
 gi|308365159|gb|EFP54010.1| antitoxin [Mycobacterium tuberculosis SUMu012]
 gi|323718798|gb|EGB27955.1| antitoxin [Mycobacterium tuberculosis CDC1551A]
 gi|326904215|gb|EGE51148.1| antitoxin [Mycobacterium tuberculosis W-148]
 gi|328458086|gb|AEB03509.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339331986|emb|CCC27689.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341602526|emb|CCC65202.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=95

 Score = 35.4 bits (80),  Expect = 2.6, Method: Compositional matrix adjust.
 Identities = 23/67 (35%), Positives = 33/67 (50%), Gaps = 1/67 (1%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDP-RTGLPLVSV  59
           ++TT+DLP +L +     A    R + + V +L+R GL+     A    P R  LPLV  
Sbjct  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60

Query  60  GTVVTSE  66
           G   T E
Sbjct  61  GGAATRE  67


>gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycobacterium tuberculosis CDC1551]
 gi|31793712|ref|NP_856205.1| hypothetical protein Mb2559Ac [Mycobacterium bovis AF2122/97]
 gi|57116999|ref|YP_177672.1| hypothetical protein Rv2530A [Mycobacterium tuberculosis H37Rv]
 68 more sequence titles
 
gi|121638414|ref|YP_978638.1| hypothetical protein BCG_2552c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148662368|ref|YP_001283891.1| hypothetical protein MRA_2558 [Mycobacterium tuberculosis H37Ra]
 gi|167967332|ref|ZP_02549609.1| hypothetical protein MtubH3_04562 [Mycobacterium tuberculosis 
H37Ra]
 gi|224990908|ref|YP_002645595.1| hypothetical protein JTY_2546 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253798390|ref|YP_003031391.1| antitoxin [Mycobacterium tuberculosis KZN 1435]
 gi|254232652|ref|ZP_04925979.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254366736|ref|ZP_04982779.1| hypothetical protein TBHG_02466 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254551579|ref|ZP_05142026.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289444065|ref|ZP_06433809.1| antitoxin [Mycobacterium tuberculosis T46]
 gi|289448178|ref|ZP_06437922.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289570696|ref|ZP_06450923.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289746316|ref|ZP_06505694.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751147|ref|ZP_06510525.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754640|ref|ZP_06514018.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289762698|ref|ZP_06522076.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294994361|ref|ZP_06800052.1| antitoxin [Mycobacterium tuberculosis 210]
 gi|297635140|ref|ZP_06952920.1| antitoxin [Mycobacterium tuberculosis KZN 4207]
 gi|297732131|ref|ZP_06961249.1| antitoxin [Mycobacterium tuberculosis KZN R506]
 gi|298526004|ref|ZP_07013413.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306776804|ref|ZP_07415141.1| antitoxin [Mycobacterium tuberculosis SUMu001]
 gi|306780570|ref|ZP_07418907.1| antitoxin [Mycobacterium tuberculosis SUMu002]
 gi|306785332|ref|ZP_07423654.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|306789931|ref|ZP_07428253.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 gi|306794013|ref|ZP_07432315.1| antitoxin [Mycobacterium tuberculosis SUMu005]
 gi|306798408|ref|ZP_07436710.1| antitoxin [Mycobacterium tuberculosis SUMu006]
 gi|306804288|ref|ZP_07440956.1| antitoxin [Mycobacterium tuberculosis SUMu008]
 gi|306807671|ref|ZP_07444339.1| antitoxin [Mycobacterium tuberculosis SUMu007]
 gi|306969873|ref|ZP_07482534.1| antitoxin [Mycobacterium tuberculosis SUMu009]
 gi|306972916|ref|ZP_07485577.1| antitoxin [Mycobacterium tuberculosis SUMu010]
 gi|307080629|ref|ZP_07489799.1| antitoxin [Mycobacterium tuberculosis SUMu011]
 gi|307085217|ref|ZP_07494330.1| antitoxin [Mycobacterium tuberculosis SUMu012]
 gi|313659464|ref|ZP_07816344.1| antitoxin [Mycobacterium tuberculosis KZN V2475]
 gi|340627546|ref|YP_004745998.1| hypothetical protein MCAN_25711 [Mycobacterium canettii CIPT 
140010059]
 gi|81764237|sp|Q8VJG5.1|VPB39_MYCTU RecName: Full=Antitoxin VapB39
 gi|13882345|gb|AAK46916.1| hypothetical protein MT2606 [Mycobacterium tuberculosis CDC1551]
 gi|31619306|emb|CAD94744.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|41353427|emb|CAE55498.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|121494062|emb|CAL72540.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124601711|gb|EAY60721.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134152247|gb|EBA44292.1| hypothetical protein TBHG_02466 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148506520|gb|ABQ74329.1| hypothetical protein MRA_2558 [Mycobacterium tuberculosis H37Ra]
 gi|224774021|dbj|BAH26827.1| hypothetical protein JTY_2546 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253319893|gb|ACT24496.1| antitoxin [Mycobacterium tuberculosis KZN 1435]
 gi|289416984|gb|EFD14224.1| antitoxin [Mycobacterium tuberculosis T46]
 gi|289421136|gb|EFD18337.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289544450|gb|EFD48098.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686844|gb|EFD54332.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691734|gb|EFD59163.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695227|gb|EFD62656.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710204|gb|EFD74220.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298495798|gb|EFI31092.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308214811|gb|EFO74210.1| antitoxin [Mycobacterium tuberculosis SUMu001]
 gi|308326584|gb|EFP15435.1| antitoxin [Mycobacterium tuberculosis SUMu002]
 gi|308330006|gb|EFP18857.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|308333623|gb|EFP22474.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 gi|308337650|gb|EFP26501.1| antitoxin [Mycobacterium tuberculosis SUMu005]
 gi|308341336|gb|EFP30187.1| antitoxin [Mycobacterium tuberculosis SUMu006]
 gi|308345912|gb|EFP34763.1| antitoxin [Mycobacterium tuberculosis SUMu007]
 gi|308349122|gb|EFP37973.1| antitoxin [Mycobacterium tuberculosis SUMu008]
 gi|308352603|gb|EFP41454.1| antitoxin [Mycobacterium tuberculosis SUMu009]
 gi|308357690|gb|EFP46541.1| antitoxin [Mycobacterium tuberculosis SUMu010]
 gi|308361632|gb|EFP50483.1| antitoxin [Mycobacterium tuberculosis SUMu011]
 gi|308365231|gb|EFP54082.1| antitoxin [Mycobacterium tuberculosis SUMu012]
 gi|323718886|gb|EGB28041.1| antitoxin [Mycobacterium tuberculosis CDC1551A]
 gi|326904145|gb|EGE51078.1| antitoxin [Mycobacterium tuberculosis W-148]
 gi|340005736|emb|CCC44902.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
 gi|341602452|emb|CCC65128.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344220358|gb|AEN00989.1| hypothetical protein MTCTRI2_2579 [Mycobacterium tuberculosis 
CTRI-2]
Length=74

 Score = 35.0 bits (79),  Expect = 4.0, Method: Compositional matrix adjust.
 Identities = 27/78 (35%), Positives = 43/78 (56%), Gaps = 9/78 (11%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSV-  59
           +RTT+ +  D+ + A +IAR   +++   +++L RR L   RP  +      G P+  V 
Sbjct  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL---RPVGIVE--VDGFPVFDVP  55

Query  60  --GTVVTSED-VRSLEDE  74
                VTSED VR+LED+
Sbjct  56  PDAPTVTSEDVVRALEDD  73


>gi|344220429|gb|AEN01060.1| hypothetical protein MTCTRI2_2650 [Mycobacterium tuberculosis 
CTRI-2]
Length=95

 Score = 34.7 bits (78),  Expect = 4.4, Method: Compositional matrix adjust.
 Identities = 23/67 (35%), Positives = 32/67 (48%), Gaps = 1/67 (1%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDP-RTGLPLVSV  59
           ++TT+DLP +L +     A    R + + V +L+R GL      A    P R  LPLV  
Sbjct  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLFQTHSGAPIPTPRRVQLPLVHC  60

Query  60  GTVVTSE  66
           G   T E
Sbjct  61  GGAATRE  67


>gi|304389553|ref|ZP_07371515.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii 
ATCC 35241]
 gi|304327106|gb|EFL94342.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii 
ATCC 35241]
Length=84

 Score = 34.7 bits (78),  Expect = 4.8, Method: Compositional matrix adjust.
 Identities = 23/73 (32%), Positives = 38/73 (53%), Gaps = 6/73 (8%)

Query  5   IDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANR------PTALSSDPRTGLPLVS  58
           ++LP DL ++   +A       S+  A  +R G+A+ R      P  +  DP TG   +S
Sbjct  1   MELPPDLAEKVSQLASARGVDSSDLAASFIREGIASVRFTPTPPPFRVVKDPNTGWSSLS  60

Query  59  VGTVVTSEDVRSL  71
           +G  VTS +V++L
Sbjct  61  LGHTVTSAEVKAL  73


>gi|340627507|ref|YP_004745959.1| hypothetical protein MCAN_25321 [Mycobacterium canettii CIPT 
140010059]
 gi|340005697|emb|CCC44863.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=73

 Score = 34.7 bits (78),  Expect = 5.1, Method: Compositional matrix adjust.
 Identities = 29/77 (38%), Positives = 42/77 (55%), Gaps = 8/77 (10%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSV-  59
           +RTT+DL  D+   A  +A    R+L   +++L RRGL   R   + +D   GLP++ V 
Sbjct  1   MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGLMPGR---IEAD--DGLPVIRVP  55

Query  60  -GT-VVTSEDVRSLEDE  74
            GT  +T E VR   DE
Sbjct  56  AGTPPITPEMVRRALDE  72


>gi|298346744|ref|YP_003719431.1| hypothetical protein HMPREF0573_11618 [Mobiluncus curtisii ATCC 
43063]
 gi|315656796|ref|ZP_07909683.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii 
ATCC 35242]
 gi|298236805|gb|ADI67937.1| hypothetical protein HMPREF0573_11618 [Mobiluncus curtisii ATCC 
43063]
 gi|315492751|gb|EFU82355.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii 
ATCC 35242]
Length=84

 Score = 34.7 bits (78),  Expect = 5.3, Method: Compositional matrix adjust.
 Identities = 23/73 (32%), Positives = 36/73 (50%), Gaps = 6/73 (8%)

Query  5   IDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANR------PTALSSDPRTGLPLVS  58
           ++LP DL ++   IA       S   A  +R G+A+ R      P  +  DP TG   +S
Sbjct  1   MELPPDLAEKVSQIASARGVDSSYLAASFIREGIASVRFTPTPPPFRVVKDPNTGWSSLS  60

Query  59  VGTVVTSEDVRSL  71
           +G  VTS +V++ 
Sbjct  61  LGRTVTSAEVKAF  73


>gi|15609630|ref|NP_217009.1| hypothetical protein Rv2493 [Mycobacterium tuberculosis H37Rv]
 gi|15842021|ref|NP_337058.1| hypothetical protein MT2568 [Mycobacterium tuberculosis CDC1551]
 gi|31793673|ref|NP_856166.1| hypothetical protein Mb2521 [Mycobacterium bovis AF2122/97]
 65 more sequence titles
 
gi|121638375|ref|YP_978599.1| hypothetical protein BCG_2513 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148662329|ref|YP_001283852.1| hypothetical protein MRA_2519 [Mycobacterium tuberculosis H37Ra]
 gi|167967639|ref|ZP_02549916.1| hypothetical protein MtubH3_06221 [Mycobacterium tuberculosis 
H37Ra]
 gi|224990869|ref|YP_002645556.1| hypothetical protein JTY_2507 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253798427|ref|YP_003031428.1| antitoxin [Mycobacterium tuberculosis KZN 1435]
 gi|254232623|ref|ZP_04925950.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254551540|ref|ZP_05141987.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289444023|ref|ZP_06433767.1| antitoxin [Mycobacterium tuberculosis T46]
 gi|289553715|ref|ZP_06442925.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289570653|ref|ZP_06450880.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575198|ref|ZP_06455425.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289746275|ref|ZP_06505653.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751102|ref|ZP_06510480.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289762661|ref|ZP_06522039.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294994399|ref|ZP_06800090.1| antitoxin [Mycobacterium tuberculosis 210]
 gi|297635101|ref|ZP_06952881.1| antitoxin [Mycobacterium tuberculosis KZN 4207]
 gi|297732092|ref|ZP_06961210.1| antitoxin [Mycobacterium tuberculosis KZN R506]
 gi|306776766|ref|ZP_07415103.1| antitoxin [Mycobacterium tuberculosis SUMu001]
 gi|306780533|ref|ZP_07418870.1| antitoxin [Mycobacterium tuberculosis SUMu002]
 gi|306785293|ref|ZP_07423615.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|306789647|ref|ZP_07427969.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 gi|306793974|ref|ZP_07432276.1| antitoxin [Mycobacterium tuberculosis SUMu005]
 gi|306798369|ref|ZP_07436671.1| antitoxin [Mycobacterium tuberculosis SUMu006]
 gi|306804249|ref|ZP_07440917.1| antitoxin [Mycobacterium tuberculosis SUMu008]
 gi|306807710|ref|ZP_07444378.1| antitoxin [Mycobacterium tuberculosis SUMu007]
 gi|306968645|ref|ZP_07481306.1| antitoxin [Mycobacterium tuberculosis SUMu009]
 gi|306972877|ref|ZP_07485538.1| antitoxin [Mycobacterium tuberculosis SUMu010]
 gi|307080591|ref|ZP_07489761.1| antitoxin [Mycobacterium tuberculosis SUMu011]
 gi|307085178|ref|ZP_07494291.1| antitoxin [Mycobacterium tuberculosis SUMu012]
 gi|313659426|ref|ZP_07816306.1| antitoxin [Mycobacterium tuberculosis KZN V2475]
 gi|339632519|ref|YP_004724161.1| hypothetical protein MAF_25080 [Mycobacterium africanum GM041182]
 gi|81669283|sp|O53218.1|VPB38_MYCTU RecName: Full=Putative antitoxin VapB38
 gi|2791533|emb|CAA16070.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13882298|gb|AAK46872.1| hypothetical protein MT2568 [Mycobacterium tuberculosis CDC1551]
 gi|31619266|emb|CAD97382.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494023|emb|CAL72501.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124601682|gb|EAY60692.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|148506481|gb|ABQ74290.1| hypothetical protein MRA_2519 [Mycobacterium tuberculosis H37Ra]
 gi|224773982|dbj|BAH26788.1| hypothetical protein JTY_2507 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253319930|gb|ACT24533.1| antitoxin [Mycobacterium tuberculosis KZN 1435]
 gi|289416942|gb|EFD14182.1| antitoxin [Mycobacterium tuberculosis T46]
 gi|289438347|gb|EFD20840.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289539629|gb|EFD44207.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289544407|gb|EFD48055.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686803|gb|EFD54291.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691689|gb|EFD59118.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289710167|gb|EFD74183.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|308214827|gb|EFO74226.1| antitoxin [Mycobacterium tuberculosis SUMu001]
 gi|308326599|gb|EFP15450.1| antitoxin [Mycobacterium tuberculosis SUMu002]
 gi|308330021|gb|EFP18872.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|308333864|gb|EFP22715.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 gi|308337664|gb|EFP26515.1| antitoxin [Mycobacterium tuberculosis SUMu005]
 gi|308341345|gb|EFP30196.1| antitoxin [Mycobacterium tuberculosis SUMu006]
 gi|308345898|gb|EFP34749.1| antitoxin [Mycobacterium tuberculosis SUMu007]
 gi|308349137|gb|EFP37988.1| antitoxin [Mycobacterium tuberculosis SUMu008]
 gi|308353761|gb|EFP42612.1| antitoxin [Mycobacterium tuberculosis SUMu009]
 gi|308357704|gb|EFP46555.1| antitoxin [Mycobacterium tuberculosis SUMu010]
 gi|308361645|gb|EFP50496.1| antitoxin [Mycobacterium tuberculosis SUMu011]
 gi|308365258|gb|EFP54109.1| antitoxin [Mycobacterium tuberculosis SUMu012]
 gi|323718901|gb|EGB28055.1| antitoxin [Mycobacterium tuberculosis CDC1551A]
 gi|326904107|gb|EGE51040.1| antitoxin [Mycobacterium tuberculosis W-148]
 gi|328458195|gb|AEB03618.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339331875|emb|CCC27578.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341602413|emb|CCC65089.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344220320|gb|AEN00951.1| hypothetical protein MTCTRI2_2539 [Mycobacterium tuberculosis 
CTRI-2]
Length=73

 Score = 34.3 bits (77),  Expect = 6.4, Method: Compositional matrix adjust.
 Identities = 29/77 (38%), Positives = 40/77 (52%), Gaps = 8/77 (10%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSV-  59
           +RTT+DL  D+   A  +A    R+L   +++L RRGL   R  A       GLP++ V 
Sbjct  1   MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGLMPGRVEA-----DDGLPVIRVP  55

Query  60  -GT-VVTSEDVRSLEDE  74
            GT  +T E VR   DE
Sbjct  56  AGTPPITPEMVRRALDE  72


>gi|196230684|ref|ZP_03129545.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
 gi|196225025|gb|EDY19534.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
Length=80

 Score = 33.9 bits (76),  Expect = 7.9, Method: Compositional matrix adjust.
 Identities = 26/75 (35%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query  1   VRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAA-NRPTALSSDPRTGLPLVSV  59
           +RTT+D+  D+   A  I+  T R++   ++DL R  L    +  A  S    G  ++S 
Sbjct  1   MRTTLDIDSDVLAAAKEISARTKRSVGHVISDLARAALLKRGKSKARISRMINGFEVISA  60

Query  60  -GTVVTSEDVRSLED  73
            G VVTSE VR L +
Sbjct  61  DGRVVTSELVRKLAE  75



Lambda     K      H
   0.314    0.128    0.343 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 131059142040




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40