BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0622
Length=315
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840023|ref|NP_335060.1| hypothetical protein MT0650 [Mycoba... 645 0.0
gi|253797560|ref|YP_003030561.1| hypothetical protein TBMG_00631... 644 0.0
gi|31791804|ref|NP_854297.1| hypothetical protein Mb0638 [Mycoba... 642 0.0
gi|289744336|ref|ZP_06503714.1| conserved hypothetical protein [... 641 0.0
gi|289446177|ref|ZP_06435921.1| membrane protein [Mycobacterium ... 640 0.0
gi|308371724|ref|ZP_07425959.2| hypothetical protein TMDG_02343 ... 632 2e-179
gi|308396105|ref|ZP_07492234.2| hypothetical protein TMLG_03371 ... 406 2e-111
gi|289760746|ref|ZP_06520124.1| hypothetical membrane protein [M... 380 1e-103
gi|120402142|ref|YP_951971.1| hypothetical protein Mvan_1129 [My... 375 4e-102
gi|315446110|ref|YP_004078989.1| hypothetical protein Mspyr1_460... 375 5e-102
gi|145225759|ref|YP_001136437.1| hypothetical protein Mflv_5183 ... 373 2e-101
gi|339297300|gb|AEJ49410.1| hypothetical protein CCDC5180_0573 [... 309 4e-82
gi|339297301|gb|AEJ49411.1| hypothetical membrane protein [Mycob... 300 2e-79
gi|118471760|ref|YP_890945.1| hypothetical protein MSMEG_6737 [M... 238 1e-60
gi|326775626|ref|ZP_08234891.1| hypothetical protein SACT1_1440 ... 62.4 8e-08
gi|319948771|ref|ZP_08022889.1| hypothetical protein ES5_05285 [... 58.5 1e-06
gi|256379087|ref|YP_003102747.1| hypothetical protein Amir_5079 ... 57.4 3e-06
gi|269125658|ref|YP_003299028.1| hypothetical protein Tcur_1410 ... 57.0 4e-06
gi|297191813|ref|ZP_06909211.1| protein kinase [Streptomyces pri... 54.7 2e-05
gi|118472741|ref|YP_885582.1| serine/threonine protein kinase [M... 54.3 3e-05
gi|334117900|ref|ZP_08491991.1| hypothetical protein MicvaDRAFT_... 51.2 2e-04
gi|258653060|ref|YP_003202216.1| hypothetical protein Namu_2887 ... 48.1 0.002
gi|29565827|ref|NP_817399.1| gp61 [Mycobacterium phage Che8] >gi... 44.7 0.022
gi|29566471|ref|NP_818037.1| gp64 [Mycobacterium phage Che9d] >g... 43.9 0.030
gi|290959740|ref|YP_003490922.1| hypothetical protein SCAB_53451... 43.1 0.051
gi|258652161|ref|YP_003201317.1| hypothetical protein Namu_1939 ... 43.1 0.056
gi|108797772|ref|YP_637969.1| serine/threonine protein kinase [M... 42.0 0.14
gi|126433399|ref|YP_001069090.1| protein kinase [Mycobacterium s... 41.6 0.15
gi|339781991|gb|AEK07818.1| gp68 [Mycobacterium phage Yoshi] 40.4 0.38
gi|118462738|ref|YP_880661.1| hypothetical protein MAV_1419 [Myc... 40.4 0.40
gi|41408599|ref|NP_961435.1| hypothetical protein MAP2501 [Mycob... 39.7 0.71
gi|336458546|gb|EGO37514.1| Protein of unknown function (DUF732)... 39.3 0.83
gi|254774297|ref|ZP_05215813.1| hypothetical protein MaviaA2_064... 38.9 1.1
gi|332289988|ref|YP_004420840.1| organic solvent tolerance prote... 37.7 2.7
gi|283458929|ref|YP_003363577.1| Rhs family protein [Rothia muci... 37.0 3.6
gi|91199602|emb|CAI77956.1| putative secreted protein [Streptomy... 37.0 3.9
gi|194762328|ref|XP_001963302.1| GF15872 [Drosophila ananassae] ... 37.0 4.5
gi|342861294|ref|ZP_08717942.1| hypothetical protein MCOL_20521 ... 36.2 6.6
gi|108800570|ref|YP_640767.1| hypothetical protein Mmcs_3604 [My... 36.2 7.2
>gi|15840023|ref|NP_335060.1| hypothetical protein MT0650 [Mycobacterium tuberculosis CDC1551]
gi|13880167|gb|AAK44874.1| hypothetical protein MT0650 [Mycobacterium tuberculosis CDC1551]
Length=363
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/315 (100%), Positives = 315/315 (100%), Gaps = 0/315 (0%)
Query 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV
Sbjct 49 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 108
Query 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG
Sbjct 109 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 168
Query 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 180
LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ
Sbjct 169 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 228
Query 181 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 240
GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA
Sbjct 229 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 288
Query 241 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 300
DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY
Sbjct 289 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 348
Query 301 SFADLKANGLSLVLG 315
SFADLKANGLSLVLG
Sbjct 349 SFADLKANGLSLVLG 363
>gi|253797560|ref|YP_003030561.1| hypothetical protein TBMG_00631 [Mycobacterium tuberculosis KZN
1435]
gi|254363577|ref|ZP_04979623.1| hypothetical membrane protein [Mycobacterium tuberculosis str.
Haarlem]
gi|289552874|ref|ZP_06442084.1| membrane protein [Mycobacterium tuberculosis KZN 605]
gi|134149091|gb|EBA41136.1| hypothetical membrane protein [Mycobacterium tuberculosis str.
Haarlem]
gi|253319063|gb|ACT23666.1| membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289437506|gb|EFD19999.1| membrane protein [Mycobacterium tuberculosis KZN 605]
gi|328457341|gb|AEB02764.1| membrane protein [Mycobacterium tuberculosis KZN 4207]
Length=341
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/315 (100%), Positives = 315/315 (100%), Gaps = 0/315 (0%)
Query 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV
Sbjct 27 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 86
Query 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG
Sbjct 87 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 146
Query 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 180
LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ
Sbjct 147 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 206
Query 181 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 240
GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA
Sbjct 207 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 266
Query 241 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 300
DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY
Sbjct 267 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 326
Query 301 SFADLKANGLSLVLG 315
SFADLKANGLSLVLG
Sbjct 327 SFADLKANGLSLVLG 341
>gi|31791804|ref|NP_854297.1| hypothetical protein Mb0638 [Mycobacterium bovis AF2122/97]
gi|57116762|ref|NP_215136.2| hypothetical protein Rv0622 [Mycobacterium tuberculosis H37Rv]
gi|121636541|ref|YP_976764.1| hypothetical protein BCG_0668 [Mycobacterium bovis BCG str. Pasteur
1173P2]
58 more sequence titles
Length=315
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/315 (100%), Positives = 315/315 (100%), Gaps = 0/315 (0%)
Query 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV
Sbjct 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
Query 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG
Sbjct 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
Query 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 180
LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ
Sbjct 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 180
Query 181 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 240
GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA
Sbjct 181 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 240
Query 241 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 300
DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY
Sbjct 241 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 300
Query 301 SFADLKANGLSLVLG 315
SFADLKANGLSLVLG
Sbjct 301 SFADLKANGLSLVLG 315
>gi|289744336|ref|ZP_06503714.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289684864|gb|EFD52352.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=341
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/315 (99%), Positives = 314/315 (99%), Gaps = 0/315 (0%)
Query 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV
Sbjct 27 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 86
Query 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG
Sbjct 87 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 146
Query 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 180
LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ
Sbjct 147 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 206
Query 181 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 240
GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDES NVYAPAITVSGSGCSGSAGYA
Sbjct 207 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESLNVYAPAITVSGSGCSGSAGYA 266
Query 241 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 300
DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY
Sbjct 267 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 326
Query 301 SFADLKANGLSLVLG 315
SFADLKANGLSLVLG
Sbjct 327 SFADLKANGLSLVLG 341
>gi|289446177|ref|ZP_06435921.1| membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289419135|gb|EFD16336.1| membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=315
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/315 (99%), Positives = 314/315 (99%), Gaps = 0/315 (0%)
Query 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPD TGRHEGRYFV
Sbjct 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDSTGRHEGRYFV 60
Query 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG
Sbjct 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
Query 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 180
LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ
Sbjct 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 180
Query 181 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 240
GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA
Sbjct 181 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 240
Query 241 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 300
DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY
Sbjct 241 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 300
Query 301 SFADLKANGLSLVLG 315
SFADLKANGLSLVLG
Sbjct 301 SFADLKANGLSLVLG 315
>gi|308371724|ref|ZP_07425959.2| hypothetical protein TMDG_02343 [Mycobacterium tuberculosis SUMu004]
gi|308335714|gb|EFP24565.1| hypothetical protein TMDG_02343 [Mycobacterium tuberculosis SUMu004]
Length=311
Score = 632 bits (1631), Expect = 2e-179, Method: Compositional matrix adjust.
Identities = 310/311 (99%), Positives = 311/311 (100%), Gaps = 0/311 (0%)
Query 5 VYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFVAGQP 64
+YCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFVAGQP
Sbjct 1 MYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFVAGQP 60
Query 65 TDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLGLVGA 124
TDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLGLVGA
Sbjct 61 TDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLGLVGA 120
Query 125 GVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQGMPV 184
GVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQGMPV
Sbjct 121 GVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQGMPV 180
Query 185 DQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDR 244
DQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDR
Sbjct 181 DQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDR 240
Query 245 GTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSYSFAD 304
GTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSYSFAD
Sbjct 241 GTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSYSFAD 300
Query 305 LKANGLSLVLG 315
LKANGLSLVLG
Sbjct 301 LKANGLSLVLG 311
>gi|308396105|ref|ZP_07492234.2| hypothetical protein TMLG_03371 [Mycobacterium tuberculosis SUMu012]
gi|308367166|gb|EFP56017.1| hypothetical protein TMLG_03371 [Mycobacterium tuberculosis SUMu012]
Length=201
Score = 406 bits (1043), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 200/201 (99%), Positives = 201/201 (100%), Gaps = 0/201 (0%)
Query 115 VVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQ 174
+VAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQ
Sbjct 1 MVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQ 60
Query 175 DGGEQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCS 234
DGGEQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCS
Sbjct 61 DGGEQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCS 120
Query 235 GSAGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSR 294
GSAGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSR
Sbjct 121 GSAGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSR 180
Query 295 RGEMSYSFADLKANGLSLVLG 315
RGEMSYSFADLKANGLSLVLG
Sbjct 181 RGEMSYSFADLKANGLSLVLG 201
>gi|289760746|ref|ZP_06520124.1| hypothetical membrane protein [Mycobacterium tuberculosis GM
1503]
gi|289708252|gb|EFD72268.1| hypothetical membrane protein [Mycobacterium tuberculosis GM
1503]
Length=310
Score = 380 bits (976), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 117 AFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDG 176
AFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDG
Sbjct 112 AFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDG 171
Query 177 GEQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGS 236
GEQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGS
Sbjct 172 GEQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGS 231
Query 237 AGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRG 296
AGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRG
Sbjct 232 AGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRG 291
Query 297 EMSYSFADLKANGLSLVLG 315
EMSYSFADLKANGLSLVLG
Sbjct 292 EMSYSFADLKANGLSLVLG 310
>gi|120402142|ref|YP_951971.1| hypothetical protein Mvan_1129 [Mycobacterium vanbaalenii PYR-1]
gi|119954960|gb|ABM11965.1| putative membrane protein [Mycobacterium vanbaalenii PYR-1]
Length=313
Score = 375 bits (964), Expect = 4e-102, Method: Compositional matrix adjust.
Identities = 182/318 (58%), Positives = 237/318 (75%), Gaps = 8/318 (2%)
Query 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATG--WRPDPTGRHEGRY 58
M FCV+CG EL D RC +CGA +G TWH + G A+ G W PDPTGRHEGRY
Sbjct 1 MGFCVFCGGELTDTMRCTSCGAVNVGGTWHESAYVVPGDASVGAGAGWHPDPTGRHEGRY 60
Query 59 FVAGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAF 118
FV GQPTDL+R+G EA+DP+G+QQL+ +GA VS + R+G R WW + V
Sbjct 61 FVGGQPTDLIRDGGVEALDPMGKQQLELAGAEPVSTPVTA---RTGPR--WWIVTAAVLA 115
Query 119 LGLVGAGVVGTL-FLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGG 177
L + VG +LNRDR ++D++YL AL++SG +G+FNSDANA+A GKQVCR L+DGG
Sbjct 116 LLALVGAGVGAYAYLNRDRTTVDERYLVALKQSGFSGDFNSDANAVAHGKQVCRTLEDGG 175
Query 178 EQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSA 237
QQGMP D+VAVQ++CPQF +GFH+L+T T++GSFTL DE PN Y PAI V GS C G+
Sbjct 176 PQQGMPADEVAVQHFCPQFVEGFHVLQTATISGSFTLNDEDPNPYFPAIEVDGSSCVGAG 235
Query 238 GYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGE 297
GY+D++ GT VTVKNG+G+IL T +L+ G+GGRF CTF F+F++TEG+DRYVV+V +RGE
Sbjct 236 GYSDVNPGTPVTVKNGKGEILTTTYLEEGKGGRFRCTFGFTFDVTEGQDRYVVAVGKRGE 295
Query 298 MSYSFADLKANGLSLVLG 315
+SYSF +L+A G++LVLG
Sbjct 296 LSYSFDELRAGGVALVLG 313
>gi|315446110|ref|YP_004078989.1| hypothetical protein Mspyr1_46030 [Mycobacterium sp. Spyr1]
gi|315264413|gb|ADU01155.1| hypothetical protein Mspyr1_46030 [Mycobacterium sp. Spyr1]
Length=306
Score = 375 bits (963), Expect = 5e-102, Method: Compositional matrix adjust.
Identities = 186/315 (60%), Positives = 233/315 (74%), Gaps = 9/315 (2%)
Query 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
M FCV+CG L D RC +CGA I TWH + + T GW+PDPTGRHEGRYFV
Sbjct 1 MGFCVFCGGALTDAMRCHSCGAVNIAGTWHESAY----SGGTGGGWQPDPTGRHEGRYFV 56
Query 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
GQPTDL+R+G EA+DP+G+ +L+ +G V VS R RR W A V+A L
Sbjct 57 GGQPTDLIRDGGVEALDPVGRHELEPAG---VDRLPVSAGRRG--RRGWIVAAAVLAVLA 111
Query 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 180
+ GAGV ++NRDR ++DD+YL AL++SG GEFNSDANA+A GKQVCR L+ GG QQ
Sbjct 112 IAGAGVGAYAYVNRDRTTVDDRYLVALKQSGFAGEFNSDANAVAHGKQVCRALEGGGPQQ 171
Query 181 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 240
GMP D+VAVQY+CPQF +GFH+LET T+TGSFTL DE PN Y+PAI V GS C G+ GY+
Sbjct 172 GMPADEVAVQYFCPQFVEGFHVLETATITGSFTLNDEDPNRYSPAIEVDGSSCVGAGGYS 231
Query 241 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 300
D++ GT VTVKNG+G+IL T +L+ G+GGRF CTF F+FE+ EG+DRYVV+V RRGE+SY
Sbjct 232 DVNPGTPVTVKNGKGEILTTTYLEDGRGGRFRCTFGFTFEVIEGQDRYVVAVGRRGELSY 291
Query 301 SFADLKANGLSLVLG 315
SF +L+A G+SLVLG
Sbjct 292 SFDELRAGGVSLVLG 306
>gi|145225759|ref|YP_001136437.1| hypothetical protein Mflv_5183 [Mycobacterium gilvum PYR-GCK]
gi|145218245|gb|ABP47649.1| putative membrane protein [Mycobacterium gilvum PYR-GCK]
Length=306
Score = 373 bits (957), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 188/315 (60%), Positives = 234/315 (75%), Gaps = 9/315 (2%)
Query 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
M FCV+CG L D RC +CGA I TWH + + T GW+PDPTGRHEGRYFV
Sbjct 1 MGFCVFCGGALTDAMRCHSCGAVNIAGTWHESAY----SGGTGGGWQPDPTGRHEGRYFV 56
Query 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
GQPTDL+R+G EA+DP+G+QQL+ AV S G R G RR W A V A L
Sbjct 57 GGQPTDLIRDGGVEALDPMGRQQLEP--AVVEHLSVPEG--RRGRRR-WMVAAAVAAVLA 111
Query 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQ 180
+ GAGV ++NRDR ++DD+YL A+++SG GEFNSDANA+A GKQVCR L+ GG QQ
Sbjct 112 IAGAGVGAYAYVNRDRTTVDDRYLVAIKQSGFAGEFNSDANAVAHGKQVCRALEGGGPQQ 171
Query 181 GMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYA 240
GMP D+VAVQY+CPQF +GFH+LET T++GSFTL DE PN Y+PAI V GS C G+ GY+
Sbjct 172 GMPADEVAVQYFCPQFVEGFHVLETATISGSFTLNDEDPNPYSPAIEVDGSSCVGAGGYS 231
Query 241 DIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSY 300
D++ GT VTVKNG+G+IL T +L+ G+GGRF CTF F+FE+TEG+DRYVV+V RRGE+SY
Sbjct 232 DVNPGTPVTVKNGKGEILTTTYLEDGRGGRFRCTFGFTFEVTEGQDRYVVAVGRRGELSY 291
Query 301 SFADLKANGLSLVLG 315
SF +L+A G+SLVLG
Sbjct 292 SFDELRAGGVSLVLG 306
>gi|339297300|gb|AEJ49410.1| hypothetical protein CCDC5180_0573 [Mycobacterium tuberculosis
CCDC5180]
Length=154
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/150 (100%), Positives = 150/150 (100%), Gaps = 0/150 (0%)
Query 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV
Sbjct 1 MSFCVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFV 60
Query 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG
Sbjct 61 AGQPTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLG 120
Query 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRS 150
LVGAGVVGTLFLNRDRESIDDKYLAALRRS
Sbjct 121 LVGAGVVGTLFLNRDRESIDDKYLAALRRS 150
>gi|339297301|gb|AEJ49411.1| hypothetical membrane protein [Mycobacterium tuberculosis CCDC5180]
Length=147
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/147 (99%), Positives = 147/147 (100%), Gaps = 0/147 (0%)
Query 169 VCRQLQDGGEQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITV 228
+CRQLQDGGEQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITV
Sbjct 1 MCRQLQDGGEQQGMPVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITV 60
Query 229 SGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRY 288
SGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRY
Sbjct 61 SGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRY 120
Query 289 VVSVSRRGEMSYSFADLKANGLSLVLG 315
VVSVSRRGEMSYSFADLKANGLSLVLG
Sbjct 121 VVSVSRRGEMSYSFADLKANGLSLVLG 147
>gi|118471760|ref|YP_890945.1| hypothetical protein MSMEG_6737 [Mycobacterium smegmatis str.
MC2 155]
gi|118173047|gb|ABK73943.1| putative membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=312
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/313 (46%), Positives = 183/313 (59%), Gaps = 26/313 (8%)
Query 4 CVYCGAELADPTRCGACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFVAGQ 63
C YCG E+A C CG + ++ + +GWRPDPT R+EGRY+ AG+
Sbjct 24 CPYCGFEVAADGTCSRCGRAE--------------SSVSLSGWRPDPTARYEGRYYTAGR 69
Query 64 PTDLVREGDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLGLVG 123
PT+ VR G EA DP G Q L + S RS R W V A + +
Sbjct 70 PTNRVRNGKHEASDPTGGQMLPDYVELPAS--------RSSIRTTWITTGAVTAIIVMAA 121
Query 124 AGVVGTLFLNRDRESIDDK-YLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQGM 182
A G L +R + YLAALR +GL +FNSDANAIA G QVCR+L+DG QQG
Sbjct 122 AMAWGLLVAHRRPPPPPETGYLAALRDTGLMNQFNSDANAIAHGHQVCRRLEDGEPQQGQ 181
Query 183 PVDQVAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADI 242
P D++AV +CP F+ GFH+L+T+ V+G F L D ++ A I V GS C+G++GY+DI
Sbjct 182 PADKIAVDTFCPHFAQGFHVLDTVKVSGIFVLTD---SLGAEGIAVDGSSCTGNSGYSDI 238
Query 243 DRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSYSF 302
T VTVKNG+G+IL T L G GG C F F+F +TEGED Y+VSV RRGE YSF
Sbjct 239 GPDTDVTVKNGKGEILTTTTLGRGTGGSAECRFTFAFPVTEGEDLYIVSVGRRGEFRYSF 298
Query 303 ADLKANGLSLVLG 315
L++ G+ + LG
Sbjct 299 DQLRSRGVQVHLG 311
>gi|326775626|ref|ZP_08234891.1| hypothetical protein SACT1_1440 [Streptomyces cf. griseus XylebKG-1]
gi|326655959|gb|EGE40805.1| hypothetical protein SACT1_1440 [Streptomyces griseus XylebKG-1]
Length=170
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/112 (38%), Positives = 57/112 (51%), Gaps = 9/112 (8%)
Query 205 TITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFLQ 264
T T+TG+F L D T G GC G+ GY DI GT VTV +G G + AT L
Sbjct 67 TFTLTGAFALTD--------GATPDGDGCIGTEGYDDIAEGTSVTVYDGAGKVAATGNLG 118
Query 265 AGQGGRFLCTFPFSF-EITEGEDRYVVSVSRRGEMSYSFADLKANGLSLVLG 315
+ C F S ++ +GE Y V VS RG++ + + +A LS+ LG
Sbjct 119 KSKYTGGACAFEVSVPDVPKGEKFYQVEVSHRGKVQLTGKEAEAGKLSVTLG 170
>gi|319948771|ref|ZP_08022889.1| hypothetical protein ES5_05285 [Dietzia cinnamea P4]
gi|319437566|gb|EFV92568.1| hypothetical protein ES5_05285 [Dietzia cinnamea P4]
Length=234
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/114 (38%), Positives = 60/114 (53%), Gaps = 10/114 (8%)
Query 205 TITVTGSFTLKDESPNVYAPAITVSG--SGCSGSAGYADIDRGTQVTVKNGQGDILATAF 262
T V GSFT+ V PA VSG +GC +DI GT +T+ G ++ATA
Sbjct 127 TFPVEGSFTV------VSTPADPVSGDDTGCDLPVSLSDIGEGTTITLLEGSTSVIATAR 180
Query 263 LQAGQGGRFLCTFPFSF-EITEGEDRYVVSVSRRGEMSYSFADLKANGLSLVLG 315
L G CTF F F E+ G YVV + RG+++Y+ +L+A G+ + LG
Sbjct 181 LTYSGGDLASCTFTFGFPEVPAGGSYYVVELPGRGQLTYTEDELRA-GVDITLG 233
>gi|256379087|ref|YP_003102747.1| hypothetical protein Amir_5079 [Actinosynnema mirum DSM 43827]
gi|255923390|gb|ACU38901.1| hypothetical protein Amir_5079 [Actinosynnema mirum DSM 43827]
Length=183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/87 (41%), Positives = 51/87 (59%), Gaps = 6/87 (6%)
Query 233 CSGSAGYADIDRGTQVTVKNGQGDILATAFLQAGQ---GGRFLCTFPFSF-EITEGEDRY 288
C G+ GY DI GTQV+V + G I+A + L GG +C F F+ ++ +GE Y
Sbjct 99 CEGTRGYDDISEGTQVSVYDASGTIVAISELTNSNYLSGG--MCRFNFAVPDVPDGERIY 156
Query 289 VVSVSRRGEMSYSFADLKANGLSLVLG 315
V VS RG++SY+ D +A ++L LG
Sbjct 157 QVEVSHRGKISYTEKDARAGAINLTLG 183
>gi|269125658|ref|YP_003299028.1| hypothetical protein Tcur_1410 [Thermomonospora curvata DSM 43183]
gi|268310616|gb|ACY96990.1| hypothetical protein Tcur_1410 [Thermomonospora curvata DSM 43183]
Length=178
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/127 (33%), Positives = 60/127 (48%), Gaps = 16/127 (12%)
Query 204 ETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFL 263
+ I +TG+ TLK S ++ A S C G GYADI RG QV V++ +G +A L
Sbjct 52 QPIPLTGTLTLKGGS-KAFSGARDSFSSSCEGIGGYADITRGAQVVVRDPEGRTIAVGAL 110
Query 264 QAGQ-----------GGR----FLCTFPFSFEITEGEDRYVVSVSRRGEMSYSFADLKAN 308
G+ GG + C FPF D Y V V+ RG+++++ A +
Sbjct 111 GPGKTQDVTEYKQYNGGTVRYAWSCVFPFEIPEVPWHDFYSVEVTHRGQVTFTQAQVLLG 170
Query 309 GLSLVLG 315
+ L LG
Sbjct 171 EVHLSLG 177
>gi|297191813|ref|ZP_06909211.1| protein kinase [Streptomyces pristinaespiralis ATCC 25486]
gi|197722003|gb|EDY65911.1| protein kinase [Streptomyces pristinaespiralis ATCC 25486]
Length=202
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/116 (38%), Positives = 57/116 (50%), Gaps = 13/116 (11%)
Query 205 TITVTGSFTLKDESPNVYAPAITVSGSG-CSG--SAGYADIDRGTQVTVKNGQGDILATA 261
T T+ GSFTL DE + G G C+G +GY DI GT VTV N GD++A
Sbjct 95 TFTLNGSFTLTDE--------VQRDGDGGCAGRYDSGYDDIQEGTDVTVYNAAGDVVAKG 146
Query 262 FLQAGQG-GRFLCTFPFSF-EITEGEDRYVVSVSRRGEMSYSFADLKANGLSLVLG 315
L A + C F S ++ +GE Y V VS RG + S + + L+ LG
Sbjct 147 ELGASEEIATGTCAFDVSVADVPKGETFYKVEVSHRGTVELSAEEAENGELAATLG 202
>gi|118472741|ref|YP_885582.1| serine/threonine protein kinase [Mycobacterium smegmatis str.
MC2 155]
gi|118174028|gb|ABK74924.1| serine/threonine-protein kinase PknD [Mycobacterium smegmatis
str. MC2 155]
Length=624
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/113 (32%), Positives = 58/113 (52%), Gaps = 5/113 (4%)
Query 204 ETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFL 263
E ++ G+ L P+V SG C+G++ Y DI T +TV+N G++LA +
Sbjct 356 EPFSIAGTLQLP---PDVVKTNGLPSGFMCAGTSDYGDIGPETPITVENESGELLAKGAI 412
Query 264 QAGQGGRFLCTFPFSF-EITEGEDRYVVSVSRRGEMSYSFADLKANGLSLVLG 315
++ G C F ++ G Y V V++R EMSY+ + KA G+ +LG
Sbjct 413 ESSSKGGNGCFLKFRVDDVPSGARFYRVHVAQRAEMSYTEEEAKA-GIQFLLG 464
>gi|334117900|ref|ZP_08491991.1| hypothetical protein MicvaDRAFT_2123 [Microcoleus vaginatus FGP-2]
gi|333461009|gb|EGK89617.1| hypothetical protein MicvaDRAFT_2123 [Microcoleus vaginatus FGP-2]
Length=399
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (31%), Positives = 51/101 (51%), Gaps = 8/101 (7%)
Query 207 TVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFLQAG 266
+ GS TLKD+ + + G C+G GY DI G QV VK+ +G+ +AT L G
Sbjct 294 NIKGSLTLKDD----FFGGV---GQFCNGKGGYGDIKSGRQVLVKDHKGETIATGELGIG 346
Query 267 Q-GGRFLCTFPFSFEITEGEDRYVVSVSRRGEMSYSFADLK 306
+ C F + Y + + RRG+++YS+ +++
Sbjct 347 KIISDNHCQFSIEVNGIRKAEFYTIQIGRRGDLTYSYQEME 387
>gi|258653060|ref|YP_003202216.1| hypothetical protein Namu_2887 [Nakamurella multipartita DSM
44233]
gi|258556285|gb|ACV79227.1| hypothetical protein Namu_2887 [Nakamurella multipartita DSM
44233]
Length=162
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/95 (38%), Positives = 51/95 (54%), Gaps = 17/95 (17%)
Query 236 SAGYADIDRGTQVTVKNGQGDILATAFLQAG--------------QGGRFLCTFPFSF-E 280
S+GY DI +G QVTVK G G+ +A L G Q G C +PFS +
Sbjct 70 SSGYNDIRQGAQVTVKVG-GNTVAVGQLGEGQEIEDLSDVDVDDIQQGAGTCRYPFSIAD 128
Query 281 ITEGEDRYVVSVSRRGEMSYSFADLKANGLSLVLG 315
I G D Y + VS RG ++Y+ +L++ G++L LG
Sbjct 129 IPGGHDFYEIQVSHRGGLTYTEEELRS-GVALSLG 162
>gi|29565827|ref|NP_817399.1| gp61 [Mycobacterium phage Che8]
gi|29424552|gb|AAN12459.1| gp61 [Mycobacterium phage Che8]
Length=114
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/88 (29%), Positives = 48/88 (55%), Gaps = 10/88 (11%)
Query 105 HRRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIA 164
H R WW + ++A G++G G+ + + +S++D+++A + G+TG +S+ +AI
Sbjct 5 HWRYWWTMPLLIA-AGIIGPGLAAP---HAEADSLNDRFIAVIESEGITG-VDSERDAIV 59
Query 165 RGKQVCRQLQDGGEQQGMPVDQVAVQYY 192
++VC L G+P +A Q Y
Sbjct 60 TARKVCAPL-----NAGVPEGPIAQQIY 82
>gi|29566471|ref|NP_818037.1| gp64 [Mycobacterium phage Che9d]
gi|29425196|gb|AAN07982.1| gp64 [Mycobacterium phage Che9d]
Length=114
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/87 (28%), Positives = 47/87 (55%), Gaps = 6/87 (6%)
Query 104 GHRRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAI 163
H + WW + ++A G++G G+ + +S++D+++A + G+TG ++D +AI
Sbjct 4 AHWKYWWTMPLLIA-AGIIGPGLAAP---HAQADSLNDRFIAVIESEGITG-VDNDRDAI 58
Query 164 ARGKQVCRQLQDGGEQQGMPVDQVAVQ 190
K+VC L D G +G Q+ +
Sbjct 59 VTAKKVC-ALLDAGVPEGPIAQQIYIN 84
>gi|290959740|ref|YP_003490922.1| hypothetical protein SCAB_53451 [Streptomyces scabiei 87.22]
gi|260649266|emb|CBG72380.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=139
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/112 (37%), Positives = 53/112 (48%), Gaps = 8/112 (7%)
Query 205 TITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFLQ 264
T T+TGSF L + A+ GC GS GY DI GT VTV + G ++AT L
Sbjct 35 TFTLTGSFELTE-------GAVGDGLGGCEGSGGYEDISEGTAVTVYDAAGTVVATGQLG 87
Query 265 AGQGGRFLCTFPFSFE-ITEGEDRYVVSVSRRGEMSYSFADLKANGLSLVLG 315
CTF + E + GED Y V +S RG + S + +A LG
Sbjct 88 DSTLSSGTCTFDVAVESVPRGEDFYKVEISHRGTVQLSADEAEAGQFGASLG 139
>gi|258652161|ref|YP_003201317.1| hypothetical protein Namu_1939 [Nakamurella multipartita DSM
44233]
gi|258555386|gb|ACV78328.1| hypothetical protein Namu_1939 [Nakamurella multipartita DSM
44233]
Length=129
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/79 (37%), Positives = 45/79 (57%), Gaps = 7/79 (8%)
Query 241 DIDRGTQVTVKNGQGDILATAFLQAGQ----GGRFLCTFPFSFE-ITEGEDRYVVSVSRR 295
D+ G Q+TV++ G ++A L+ G+ G LC FP + + G + Y V V+ R
Sbjct 52 DVRDGAQITVRS-DGQVVALGRLREGEQRDNGPVSLCRFPLVIDDVPAGHEFYEVEVAHR 110
Query 296 GEMSYSFADLKANGLSLVL 314
G ++YS ADL+ +GL L L
Sbjct 111 GAVTYSEADLR-DGLRLTL 128
>gi|108797772|ref|YP_637969.1| serine/threonine protein kinase [Mycobacterium sp. MCS]
gi|119866863|ref|YP_936815.1| protein kinase [Mycobacterium sp. KMS]
gi|108768191|gb|ABG06913.1| serine/threonine protein kinase [Mycobacterium sp. MCS]
gi|119692952|gb|ABL90025.1| protein kinase [Mycobacterium sp. KMS]
Length=623
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/105 (29%), Positives = 48/105 (46%), Gaps = 4/105 (3%)
Query 204 ETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFL 263
E T+ G+ L DE V G C+G+ + DI T VTV++ G +LA +
Sbjct 353 EPFTLAGTLRLPDE---VVTTGGLPGGYTCAGTKTFGDIGPNTPVTVEDEAGKLLAKGAI 409
Query 264 QAGQGGRFLCTFPFSF-EITEGEDRYVVSVSRRGEMSYSFADLKA 307
+ R C+ F E+ G Y V V+ +++Y+ + KA
Sbjct 410 RGSASEREGCSLAFRVNEVPSGAKFYRVQVADHPQVNYTEEEAKA 454
>gi|126433399|ref|YP_001069090.1| protein kinase [Mycobacterium sp. JLS]
gi|126233199|gb|ABN96599.1| protein kinase [Mycobacterium sp. JLS]
Length=621
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/105 (29%), Positives = 48/105 (46%), Gaps = 4/105 (3%)
Query 204 ETITVTGSFTLKDESPNVYAPAITVSGSGCSGSAGYADIDRGTQVTVKNGQGDILATAFL 263
E T+ G+ L DE V G C+G+ + DI T VTV++ G +LA +
Sbjct 351 EPFTLAGTLRLPDE---VVTTGGLPGGYTCAGTKTFGDIGPNTPVTVEDEAGKLLAKGAI 407
Query 264 QAGQGGRFLCTFPFSF-EITEGEDRYVVSVSRRGEMSYSFADLKA 307
+ R C+ F E+ G Y V V+ +++Y+ + KA
Sbjct 408 RGSASEREGCSLAFRVNEVPSGAKFYRVQVADHPQVNYTEEEAKA 452
>gi|339781991|gb|AEK07818.1| gp68 [Mycobacterium phage Yoshi]
Length=112
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/89 (26%), Positives = 48/89 (54%), Gaps = 10/89 (11%)
Query 104 GHRRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAI 163
H + WW + ++A G++G G+ + ++++D+++A + G+TG +++ +AI
Sbjct 2 AHWKYWWTMPLLIA-AGIIGPGLAAP---HAHADNLNDRFIAVIESEGITG-VDNNRDAI 56
Query 164 ARGKQVCRQLQDGGEQQGMPVDQVAVQYY 192
A ++VC L G+P +A Q Y
Sbjct 57 ATARKVCALL-----NVGVPEGTIAQQIY 80
>gi|118462738|ref|YP_880661.1| hypothetical protein MAV_1419 [Mycobacterium avium 104]
gi|118164025|gb|ABK64922.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=110
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/108 (30%), Positives = 46/108 (43%), Gaps = 21/108 (19%)
Query 106 RRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIAR 165
RR+ L + A +GL G+ G R ++ D+ +LA +R G++ F S A+
Sbjct 4 RRIITVL--ITAAIGLAAVGLAGPA-AARTVQTGDEMFLAQMRSLGVS--FPSPQEAVRE 58
Query 166 GKQVCRQLQDGGEQQGMPVD----------------QVAVQYYCPQFS 197
G QVC +L G + V A Q YCPQFS
Sbjct 59 GHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFS 106
>gi|41408599|ref|NP_961435.1| hypothetical protein MAP2501 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396957|gb|AAS04818.1| hypothetical protein MAP_2501 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=114
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/108 (30%), Positives = 45/108 (42%), Gaps = 20/108 (18%)
Query 106 RRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIAR 165
RR+ L A +GL G+ G R ++ D+ +LA +R G++ F S A+
Sbjct 7 RRIITVLTTAAA-IGLAAVGLAGPA-AARTVQTGDEMFLAQMRSLGVS--FPSPQEAVRE 62
Query 166 GKQVCRQLQDGGEQQGMPVD----------------QVAVQYYCPQFS 197
G QVC +L G + V A Q YCPQFS
Sbjct 63 GHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFS 110
>gi|336458546|gb|EGO37514.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=110
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/108 (30%), Positives = 45/108 (42%), Gaps = 20/108 (18%)
Query 106 RRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIAR 165
RR+ L A +GL G+ G R ++ D+ +LA +R G++ F S A+
Sbjct 4 RRIITVLTTAAA-IGLAAVGLAGPA-AARTVQTGDEMFLAQMRSLGVS--FPSPQEAVRE 59
Query 166 GKQVCRQLQDGGEQQGMPVD----------------QVAVQYYCPQFS 197
G QVC +L G + V A Q YCPQFS
Sbjct 60 GHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFS 107
>gi|254774297|ref|ZP_05215813.1| hypothetical protein MaviaA2_06470 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=111
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/108 (30%), Positives = 45/108 (42%), Gaps = 20/108 (18%)
Query 106 RRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIAR 165
RR+ L A +GL G+ G R ++ D+ +LA +R G++ F S A+
Sbjct 4 RRIITVLTTAAA-IGLAAVGLAGPA-AARAVQTGDEMFLAQMRSLGVS--FPSPQEAVRE 59
Query 166 GKQVCRQLQDGGEQQGMPVD----------------QVAVQYYCPQFS 197
G QVC +L G + V A Q YCPQFS
Sbjct 60 GHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFS 107
>gi|332289988|ref|YP_004420840.1| organic solvent tolerance protein [Gallibacterium anatis UMN179]
gi|330432884|gb|AEC17943.1| organic solvent tolerance protein [Gallibacterium anatis UMN179]
Length=783
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 56/132 (43%), Gaps = 16/132 (12%)
Query 110 WALAGVVAFLGLVGAGVVGTLFLNRDR----ESIDDKYLAALRRSGL---TGEFNSDANA 162
W + G +L ++G+GV+ ++ DR ++ D +YL R SG + FN +
Sbjct 263 WQMLGEARYLNILGSGVLAGEYIKDDRYEDYKADDPRYLLYWRNSGSLWDSWRFNVNYTK 322
Query 163 IARGKQVCRQLQD--GGEQQGMPVDQVAVQYYCPQFS-----DGFHILETITVTGSF-TL 214
++ KQ G G A+ YY P ++ F + +T+T G + TL
Sbjct 323 VS-DKQYFNDFTSPYGSSTDGYATQSFALSYYKPNYNLTVSATQFQVFDTLTGAGPYRTL 381
Query 215 KDESPNVYAPAI 226
N Y A+
Sbjct 382 PQIDFNYYRDAL 393
>gi|283458929|ref|YP_003363577.1| Rhs family protein [Rothia mucilaginosa DY-18]
gi|283134992|dbj|BAI65757.1| Rhs family protein [Rothia mucilaginosa DY-18]
Length=2132
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/110 (30%), Positives = 45/110 (41%), Gaps = 17/110 (15%)
Query 20 CGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFVAGQPTDLVREGDAEAVDPL 79
GA + S R T P AA GW DP V G P LV D + P+
Sbjct 1691 LGARVVDSRVARFTAPDPLAAPVGAGWGADPFS------LVGGNPVSLV---DPWGLSPV 1741
Query 80 GQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLGLVGAGVVGT 129
++ ++ PS ++GWVR+ W +AG + V G +GT
Sbjct 1742 SIEEFEKQA----RPSGIAGWVRNN----WEYVAGGAMVIAGVVVGAIGT 1783
>gi|91199602|emb|CAI77956.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
gi|96771649|emb|CAI78230.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
gi|117164197|emb|CAJ87737.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
gi|126347309|emb|CAJ89015.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
Length=196
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/121 (35%), Positives = 54/121 (45%), Gaps = 19/121 (15%)
Query 12 ADPTRC-GACGAYKIGSTWHRTTTPTVGAATTATGWRPDPTGRHEGRYFVAGQPTDLVRE 70
ADP R G YK+G HR PT+G T +PDP+G+ E Y AG D +
Sbjct 36 ADPARLYDLAGLYKMG---HRYYDPTLGRFT-----QPDPSGQEENAYLYAGG--DPINR 85
Query 71 GDAEAVDPLGQQQLDQSGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLGLVGAGVVGTL 130
D +D LG + A GV S V+G SG + A A VG GV G++
Sbjct 86 VDPRGLDFLGWDGGQWARAAGVGAS-VAGAFASGPLGIGLAAAS-------VGLGVTGSI 137
Query 131 F 131
Sbjct 138 M 138
>gi|194762328|ref|XP_001963302.1| GF15872 [Drosophila ananassae]
gi|190616999|gb|EDV32523.1| GF15872 [Drosophila ananassae]
Length=390
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/71 (31%), Positives = 32/71 (46%), Gaps = 6/71 (8%)
Query 87 SGAVGVSPSAVSGWVRSGHRRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESIDDKYLAA 146
S +G+ P W R HR W + GV LV AG+V + N D E+ + +
Sbjct 25 SWILGIFPFTFDSWTRKLHRSKWLMIYGV-----LVNAGLVALILCN-DTEAESQERMEV 78
Query 147 LRRSGLTGEFN 157
RR+ L + N
Sbjct 79 FRRNPLAEQIN 89
>gi|342861294|ref|ZP_08717942.1| hypothetical protein MCOL_20521 [Mycobacterium colombiense CECT
3035]
gi|342131194|gb|EGT84475.1| hypothetical protein MCOL_20521 [Mycobacterium colombiense CECT
3035]
Length=111
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/106 (32%), Positives = 43/106 (41%), Gaps = 28/106 (26%)
Query 107 RLWWALAGVVAFLGLVGAGVVGTLFLNRDRESIDDKYLAALRRSGLTGEFNSDANAIARG 166
R LAG VAF GL L +S DD +LAAL ++G+T + N D AI G
Sbjct 2 RFLPFLAGAVAFAGLA---------LPAHADSDDDAFLAALNKAGITYQ-NPD-RAIKAG 50
Query 167 KQVCRQLQDGGEQQGMPVD-----------------QVAVQYYCPQ 195
++VC G + + D Q A YCP
Sbjct 51 QKVCDLANSGTTELDIIRDVHDLNPAFTTAKAALFVQAAASVYCPD 96
>gi|108800570|ref|YP_640767.1| hypothetical protein Mmcs_3604 [Mycobacterium sp. MCS]
gi|119869709|ref|YP_939661.1| hypothetical protein Mkms_3677 [Mycobacterium sp. KMS]
gi|126436186|ref|YP_001071877.1| hypothetical protein Mjls_3609 [Mycobacterium sp. JLS]
gi|108770989|gb|ABG09711.1| protein of unknown function DUF732 [Mycobacterium sp. MCS]
gi|119695798|gb|ABL92871.1| protein of unknown function DUF732 [Mycobacterium sp. KMS]
gi|126235986|gb|ABN99386.1| protein of unknown function DUF732 [Mycobacterium sp. JLS]
Length=126
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (52%), Gaps = 18/70 (25%)
Query 143 YLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGE----------QQGMPVDQ------ 186
+L+AL R+G+ +++ + +A GK+VC L + G+ G+P D
Sbjct 37 FLSALNRAGV--RYDNPVDTVALGKRVCPMLVEPGKDFAKVVATVRNDGVPPDLAAFFAG 94
Query 187 VAVQYYCPQF 196
+A+Q YCPQ
Sbjct 95 IAIQMYCPQM 104
Lambda K H
0.319 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 546119936736
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40