BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0626
Length=86
Score E
Sequences producing significant alignments: (Bits) Value
gi|194320086|pdb|3DBO|A Chain A, Crystal Structure Of A Member O... 166 1e-39
gi|15607766|ref|NP_215140.1| hypothetical protein Rv0626 [Mycoba... 166 1e-39
gi|326905152|gb|EGE52085.1| antitoxin [Mycobacterium tuberculosi... 163 7e-39
gi|289752668|ref|ZP_06512046.1| conserved hypothetical protein [... 158 2e-37
gi|41408126|ref|NP_960962.1| hypothetical protein MAP2028c [Myco... 145 2e-33
gi|254774871|ref|ZP_05216387.1| hypothetical protein MaviaA2_093... 140 7e-32
gi|254820581|ref|ZP_05225582.1| hypothetical protein MintA_11671... 139 1e-31
gi|308405999|ref|ZP_07669485.1| prevent-host-death family protei... 64.3 6e-09
gi|289448540|ref|ZP_06438284.1| conserved hypothetical protein [... 63.5 1e-08
gi|15842415|ref|NP_337452.1| hypothetical protein MT2941 [Mycoba... 63.2 1e-08
gi|336179973|ref|YP_004585348.1| prevent-host-death family prote... 54.3 5e-06
gi|145595624|ref|YP_001159921.1| prevent-host-death family prote... 53.5 1e-05
gi|145226166|ref|YP_001136820.1| prevent-host-death family prote... 52.8 2e-05
gi|158312410|ref|YP_001504918.1| prevent-host-death family prote... 52.8 2e-05
gi|86742785|ref|YP_483185.1| prevent-host-death protein [Frankia... 52.4 2e-05
gi|256372767|ref|YP_003110591.1| hypothetical protein Afer_2017 ... 52.0 3e-05
gi|326384830|ref|ZP_08206506.1| prevent-host-death family protei... 51.2 5e-05
gi|325067178|ref|ZP_08125851.1| prevent-host-death family protei... 50.4 8e-05
gi|326771645|ref|ZP_08230930.1| toxin-antitoxin system, antitoxi... 50.4 8e-05
gi|15607736|ref|NP_215110.1| hypothetical protein Rv0596c [Mycob... 50.4 8e-05
gi|284046266|ref|YP_003396606.1| prevent-host-death family prote... 50.1 1e-04
gi|302525773|ref|ZP_07278115.1| predicted protein [Streptomyces ... 48.5 3e-04
gi|325000439|ref|ZP_08121551.1| prevent-host-death family protei... 48.1 5e-04
gi|340532620|gb|AEK47825.1| hypothetical protein RAM_46800 [Amyc... 47.4 8e-04
gi|288917700|ref|ZP_06412063.1| prevent-host-death family protei... 47.4 8e-04
gi|88812277|ref|ZP_01127528.1| hypothetical protein NB231_02718 ... 47.0 0.001
gi|256375675|ref|YP_003099335.1| prevent-host-death family prote... 46.6 0.001
gi|84497436|ref|ZP_00996258.1| hypothetical protein JNB_14618 [J... 46.6 0.001
gi|340358515|ref|ZP_08681032.1| prevent-host-death family antito... 45.8 0.002
gi|325002767|ref|ZP_08123879.1| prevent-host-death family protei... 45.1 0.003
gi|336177396|ref|YP_004582771.1| prevent-host-death family prote... 45.1 0.003
gi|15840067|ref|NP_335104.1| hypothetical protein MT0692.1 [Myco... 45.1 0.004
gi|240171944|ref|ZP_04750603.1| prevent-host-death family protei... 44.7 0.004
gi|333989900|ref|YP_004522514.1| prevent-host-death family prote... 44.7 0.005
gi|152964325|ref|YP_001360109.1| hypothetical protein Krad_0355 ... 44.7 0.005
gi|284034137|ref|YP_003384068.1| prevent-host-death family prote... 44.3 0.007
gi|296169351|ref|ZP_06850976.1| prevent-host-death family antito... 44.3 0.007
gi|312196108|ref|YP_004016169.1| hypothetical protein FraEuI1c_2... 43.9 0.009
gi|300790924|ref|YP_003771215.1| hypothetical protein AMED_9124 ... 43.1 0.014
gi|345301822|ref|YP_004831016.1| prevent-host-death family prote... 42.7 0.019
gi|152968334|ref|YP_001364118.1| hypothetical protein Krad_4395 ... 41.2 0.054
gi|302864893|ref|YP_003833530.1| prevent-host-death family prote... 41.2 0.055
gi|343925177|ref|ZP_08764707.1| putative prevent-host-death fami... 40.8 0.063
gi|308232445|ref|ZP_07664086.1| antitoxin [Mycobacterium tubercu... 40.8 0.066
gi|268318429|ref|YP_003292147.1| prevent-host-death family prote... 40.8 0.068
gi|15610521|ref|NP_217902.1| hypothetical protein Rv3385c [Mycob... 40.4 0.084
gi|239989891|ref|ZP_04710555.1| hypothetical protein SrosN1_2148... 40.0 0.11
gi|330469026|ref|YP_004406769.1| prevent-host-death family prote... 40.0 0.11
gi|88810220|ref|ZP_01125477.1| hypothetical protein NB231_14108 ... 40.0 0.11
gi|83590917|ref|YP_430926.1| prevent-host-death protein [Moorell... 40.0 0.12
>gi|194320086|pdb|3DBO|A Chain A, Crystal Structure Of A Member Of The Vapbc Family Of
Toxin- Antitoxin Systems, Vapbc-5, From Mycobacterium Tuberculosis
Length=93
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/86 (100%), Positives = 86/86 (100%), Gaps = 0/86 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 60
MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG
Sbjct 8 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 67
Query 61 AQADPGLRNDLAVLAGDTTEDLGPIR 86
AQADPGLRNDLAVLAGDTTEDLGPIR
Sbjct 68 AQADPGLRNDLAVLAGDTTEDLGPIR 93
>gi|15607766|ref|NP_215140.1| hypothetical protein Rv0626 [Mycobacterium tuberculosis H37Rv]
gi|15840027|ref|NP_335064.1| hypothetical protein MT0654 [Mycobacterium tuberculosis CDC1551]
gi|31791808|ref|NP_854301.1| hypothetical protein Mb0642 [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=86
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/86 (100%), Positives = 86/86 (100%), Gaps = 0/86 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 60
MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG
Sbjct 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 60
Query 61 AQADPGLRNDLAVLAGDTTEDLGPIR 86
AQADPGLRNDLAVLAGDTTEDLGPIR
Sbjct 61 AQADPGLRNDLAVLAGDTTEDLGPIR 86
>gi|326905152|gb|EGE52085.1| antitoxin [Mycobacterium tuberculosis W-148]
Length=86
Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/86 (99%), Positives = 85/86 (99%), Gaps = 0/86 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 60
MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFL RLRG
Sbjct 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLFRLRG 60
Query 61 AQADPGLRNDLAVLAGDTTEDLGPIR 86
AQADPGLRNDLAVLAGDTTEDLGPIR
Sbjct 61 AQADPGLRNDLAVLAGDTTEDLGPIR 86
>gi|289752668|ref|ZP_06512046.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289693255|gb|EFD60684.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=83
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/83 (99%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
Query 4 VASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRGAQA 63
+ASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRGAQA
Sbjct 1 MASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRGAQA 60
Query 64 DPGLRNDLAVLAGDTTEDLGPIR 86
DPGLRNDLAVLAGDTTEDLGPIR
Sbjct 61 DPGLRNDLAVLAGDTTEDLGPIR 83
>gi|41408126|ref|NP_960962.1| hypothetical protein MAP2028c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396481|gb|AAS04345.1| hypothetical protein MAP_2028c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461801|gb|EGO40659.1| prevent-host-death family protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length=86
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/86 (87%), Positives = 79/86 (92%), Gaps = 0/86 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 60
MSEVASRELRNDTAGVLRRVR GEDVTIT++GR VA+LTP+RP+RRRWLSK E LSRLR
Sbjct 1 MSEVASRELRNDTAGVLRRVREGEDVTITINGRAVAMLTPLRPQRRRWLSKAELLSRLRR 60
Query 61 AQADPGLRNDLAVLAGDTTEDLGPIR 86
AQADPGLR DLA LAGDTTEDLGPIR
Sbjct 61 AQADPGLRQDLATLAGDTTEDLGPIR 86
>gi|254774871|ref|ZP_05216387.1| hypothetical protein MaviaA2_09390 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=86
Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/86 (85%), Positives = 77/86 (90%), Gaps = 0/86 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 60
MSEVASRELRNDTAGVLRRVR GEDVTITV+GR VA+LT + P+RRRWLSK E LSRLR
Sbjct 1 MSEVASRELRNDTAGVLRRVREGEDVTITVNGRAVAMLTALGPQRRRWLSKAELLSRLRR 60
Query 61 AQADPGLRNDLAVLAGDTTEDLGPIR 86
AQADPGLR DLA LAGDTTEDLGPIR
Sbjct 61 AQADPGLRQDLATLAGDTTEDLGPIR 86
>gi|254820581|ref|ZP_05225582.1| hypothetical protein MintA_11671 [Mycobacterium intracellulare
ATCC 13950]
Length=86
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/86 (87%), Positives = 76/86 (89%), Gaps = 0/86 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 60
MSEVASRELRNDTAGVLRRVR GEDVTITVSGRPVAVLT V P+RRRWLSKTE LSRL
Sbjct 1 MSEVASRELRNDTAGVLRRVRDGEDVTITVSGRPVAVLTAVVPQRRRWLSKTELLSRLPR 60
Query 61 AQADPGLRNDLAVLAGDTTEDLGPIR 86
QADPGLR DL LAGDTTE+LGPIR
Sbjct 61 VQADPGLREDLHALAGDTTEELGPIR 86
>gi|308405999|ref|ZP_07669485.1| prevent-host-death family protein [Mycobacterium tuberculosis
SUMu012]
gi|308364890|gb|EFP53741.1| prevent-host-death family protein [Mycobacterium tuberculosis
SUMu012]
Length=49
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/43 (70%), Positives = 38/43 (89%), Gaps = 0/43 (0%)
Query 2 SEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPR 44
+EVASRELRN+TAG+LRRV+AGED+TIT +G+PVA+LT P
Sbjct 3 AEVASRELRNNTAGLLRRVQAGEDITITANGKPVALLTAGSPH 45
>gi|289448540|ref|ZP_06438284.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289421498|gb|EFD18699.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=63
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/43 (70%), Positives = 38/43 (89%), Gaps = 0/43 (0%)
Query 2 SEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPR 44
+EVASRELRN+TAG+LRRV+AGED+TIT +G+PVA+LT P
Sbjct 17 AEVASRELRNNTAGLLRRVQAGEDITITANGKPVALLTAGSPH 59
>gi|15842415|ref|NP_337452.1| hypothetical protein MT2941 [Mycobacterium tuberculosis CDC1551]
gi|148662717|ref|YP_001284240.1| hypothetical protein MRA_2898 [Mycobacterium tuberculosis H37Ra]
gi|167969503|ref|ZP_02551780.1| hypothetical protein MtubH3_16341 [Mycobacterium tuberculosis
H37Ra]
21 more sequence titles
Length=63
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/43 (70%), Positives = 38/43 (89%), Gaps = 0/43 (0%)
Query 2 SEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPR 44
+EVASRELRN+TAG+LRRV+AGED+TIT +G+PVA+LT P
Sbjct 17 AEVASRELRNNTAGLLRRVQAGEDITITANGKPVALLTAGSPH 59
>gi|336179973|ref|YP_004585348.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334860953|gb|AEH11427.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=82
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/49 (60%), Positives = 37/49 (76%), Gaps = 1/49 (2%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPR-RRRW 48
MSE+ RE+R + + ++RR +AGE +TITVSGRP AVL PV PR RRW
Sbjct 1 MSEIGLREVRQNASELVRRAQAGERLTITVSGRPAAVLGPVTPRAWRRW 49
>gi|145595624|ref|YP_001159921.1| prevent-host-death family protein [Salinispora tropica CNB-440]
gi|145304961|gb|ABP55543.1| prevent-host-death family protein [Salinispora tropica CNB-440]
Length=95
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/74 (45%), Positives = 43/74 (59%), Gaps = 3/74 (4%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 60
M EV RE+R + + ++RR +AGE VTITV+GRP AVL PV P R W + S +
Sbjct 14 MDEVGLREMRQNASDLVRRAQAGERVTITVAGRPAAVLGPVGP--RAWRGWDDIASVFQ- 70
Query 61 AQADPGLRNDLAVL 74
DPG D +L
Sbjct 71 QPTDPGWAADRHLL 84
>gi|145226166|ref|YP_001136820.1| prevent-host-death family protein [Mycobacterium gilvum PYR-GCK]
gi|145218629|gb|ABP48032.1| prevent-host-death family protein [Mycobacterium gilvum PYR-GCK]
Length=82
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/71 (46%), Positives = 39/71 (55%), Gaps = 5/71 (7%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPR-RRRWLSKTEFLSRLR 59
M V RELR + + ++RRV GE++TITV+GRP A L P PR RRW E
Sbjct 1 METVGLRELRQNASDLIRRVEEGEEITITVAGRPGARLVPATPRAWRRWSDVAELF---- 56
Query 60 GAQADPGLRND 70
G ADP D
Sbjct 57 GGPADPAWDAD 67
>gi|158312410|ref|YP_001504918.1| prevent-host-death family protein [Frankia sp. EAN1pec]
gi|158107815|gb|ABW10012.1| prevent-host-death family protein [Frankia sp. EAN1pec]
Length=82
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (47%), Positives = 38/58 (66%), Gaps = 1/58 (1%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPR-RRRWLSKTEFLSR 57
M E+ RE+R + + ++RR +AGE +TITV+GRP AVL PV PR R W E ++
Sbjct 1 MDEIGLREVRQNASDLVRRAQAGERLTITVAGRPAAVLGPVSPRVWRHWDDLAELFAQ 58
>gi|86742785|ref|YP_483185.1| prevent-host-death protein [Frankia sp. CcI3]
gi|86569647|gb|ABD13456.1| Prevent-host-death protein [Frankia sp. CcI3]
Length=82
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (47%), Positives = 39/58 (68%), Gaps = 1/58 (1%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPR-RRRWLSKTEFLSR 57
M E+ RE+R + + ++RR +AGE +TITV+GRP AVL PV PR RRW + ++
Sbjct 1 MDEIGLREVRQNASDLVRRAQAGERLTITVAGRPAAVLGPVSPRTWRRWDDLADLFAQ 58
>gi|256372767|ref|YP_003110591.1| hypothetical protein Afer_2017 [Acidimicrobium ferrooxidans DSM
10331]
gi|256009351|gb|ACU54918.1| conserved hypothetical protein [Acidimicrobium ferrooxidans DSM
10331]
Length=75
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/76 (45%), Positives = 48/76 (64%), Gaps = 2/76 (2%)
Query 7 RELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRGAQADPG 66
R+L N + V+RRV +GE +T+TV RPVA + P+ RRRR +S TE ++ AD G
Sbjct 2 RDLGNTVSEVIRRVESGERLTVTVDRRPVAEIVPL--RRRRTVSATEAVAIASRHPADRG 59
Query 67 LRNDLAVLAGDTTEDL 82
L ++ L DTT+DL
Sbjct 60 LLREVRSLLSDTTDDL 75
>gi|326384830|ref|ZP_08206506.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326196492|gb|EGD53690.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
Length=83
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/70 (43%), Positives = 40/70 (58%), Gaps = 3/70 (4%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRG 60
M+ V RELR D + ++RRV G++VTITVSGRPVA L P+ R + ++ L
Sbjct 1 MTTVGLRELRQDASNLVRRVEGGDEVTITVSGRPVARLVSAAPKAWR---EWSAVADLFN 57
Query 61 AQADPGLRND 70
ADP D
Sbjct 58 GTADPAWEAD 67
>gi|325067178|ref|ZP_08125851.1| prevent-host-death family protein [Actinomyces oris K20]
Length=88
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/41 (52%), Positives = 30/41 (74%), Gaps = 0/41 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPV 41
M + RELRN++A +L RV+AGE IT +G PVA+L+P+
Sbjct 4 MQTIMHRELRNNSAAILHRVQAGETFEITNNGEPVAILSPI 44
>gi|326771645|ref|ZP_08230930.1| toxin-antitoxin system, antitoxin component, PHD family [Actinomyces
viscosus C505]
gi|326637778|gb|EGE38679.1| toxin-antitoxin system, antitoxin component, PHD family [Actinomyces
viscosus C505]
Length=88
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/41 (52%), Positives = 30/41 (74%), Gaps = 0/41 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPV 41
M + RELRN++A +L RV+AGE IT +G PVA+L+P+
Sbjct 4 MQTIMHRELRNNSAAILHRVQAGETFEITNNGEPVAILSPI 44
>gi|15607736|ref|NP_215110.1| hypothetical protein Rv0596c [Mycobacterium tuberculosis H37Rv]
gi|15839999|ref|NP_335036.1| hypothetical protein MT0626 [Mycobacterium tuberculosis CDC1551]
gi|31791778|ref|NP_854271.1| hypothetical protein Mb0612c [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=85
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/55 (48%), Positives = 37/55 (68%), Gaps = 1/55 (1%)
Query 4 VASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRL 58
+ +R+LRN TA VLRRV AGE++ + RPVA + P++ RRR+WL E + L
Sbjct 5 IPARDLRNHTAEVLRRVAAGEEIEVLKDNRPVARIVPLK-RRRQWLPAAEVIGEL 58
>gi|284046266|ref|YP_003396606.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
gi|283950487|gb|ADB53231.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
Length=83
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/80 (43%), Positives = 45/80 (57%), Gaps = 0/80 (0%)
Query 2 SEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRGA 61
EV+ RELRN TA V+ VR GE +T+TV+ VA + P RR W+ + +R A
Sbjct 3 KEVSVRELRNHTADVVAAVRGGETMTLTVNRERVADIVPHVERRDPWVPASVLREIVREA 62
Query 62 QADPGLRNDLAVLAGDTTED 81
AD GL DLA + G +D
Sbjct 63 PADRGLLADLADVRGALLDD 82
>gi|302525773|ref|ZP_07278115.1| predicted protein [Streptomyces sp. AA4]
gi|302434668|gb|EFL06484.1| predicted protein [Streptomyces sp. AA4]
Length=95
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (49%), Positives = 35/56 (63%), Gaps = 4/56 (7%)
Query 2 SEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVR----PRRRRWLSKTE 53
S + RELRND A ++RRV AGE +T +G+PVA L P R PRR R L + +
Sbjct 3 SAIGQRELRNDNAEIMRRVAAGESFVVTRNGKPVADLVPHRAPEEPRRDRTLGEIQ 58
>gi|325000439|ref|ZP_08121551.1| prevent-host-death family protein [Pseudonocardia sp. P1]
Length=88
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/55 (46%), Positives = 35/55 (64%), Gaps = 3/55 (5%)
Query 4 VASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRL 58
+ +LRND A V++RV +GE T+TV+GRPVA L P +RR + E + RL
Sbjct 5 IKQSQLRNDNAAVMKRVASGESFTVTVNGRPVADLV---PHQRRTVVPAEEMDRL 56
>gi|340532620|gb|AEK47825.1| hypothetical protein RAM_46800 [Amycolatopsis mediterranei S699]
Length=90
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/43 (56%), Positives = 30/43 (70%), Gaps = 0/43 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRP 43
M++V REL DTAGVL RV+AGEDV IT G +A + P +P
Sbjct 1 MNQVGVRELNQDTAGVLARVKAGEDVEITERGTVIARIVPAQP 43
>gi|288917700|ref|ZP_06412063.1| prevent-host-death family protein [Frankia sp. EUN1f]
gi|288350915|gb|EFC85129.1| prevent-host-death family protein [Frankia sp. EUN1f]
Length=74
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/49 (49%), Positives = 33/49 (68%), Gaps = 1/49 (2%)
Query 9 LRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRR-RRWLSKTEFLS 56
+R + + ++RR +AGE +TITV+GRP AVL PV P R RRW + S
Sbjct 1 MRQNASELVRRAQAGEQLTITVTGRPAAVLGPVAPHRWRRWDDLADIFS 49
>gi|88812277|ref|ZP_01127528.1| hypothetical protein NB231_02718 [Nitrococcus mobilis Nb-231]
gi|88790528|gb|EAR21644.1| hypothetical protein NB231_02718 [Nitrococcus mobilis Nb-231]
Length=93
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/66 (49%), Positives = 41/66 (63%), Gaps = 5/66 (7%)
Query 3 EVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRGAQ 62
EV+ REL+N + LRR +AGE++TI GRPVA L P RP R + E L+RL
Sbjct 2 EVSVRELKNRLSEYLRRTQAGEEITIASRGRPVARLLPPRPATR--PTDDEALARL---M 56
Query 63 ADPGLR 68
A PG+R
Sbjct 57 ALPGIR 62
>gi|256375675|ref|YP_003099335.1| prevent-host-death family protein [Actinosynnema mirum DSM 43827]
gi|255919978|gb|ACU35489.1| prevent-host-death family protein [Actinosynnema mirum DSM 43827]
Length=94
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/55 (46%), Positives = 35/55 (64%), Gaps = 2/55 (3%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTP--VRPRRRRWLSKTE 53
++ + RELRND A ++RRV AGE +T +GRPVA L P PR R L++ +
Sbjct 3 VASIGQRELRNDNAEIMRRVEAGESFVVTRNGRPVADLVPHAAEPRPRATLAELQ 57
>gi|84497436|ref|ZP_00996258.1| hypothetical protein JNB_14618 [Janibacter sp. HTCC2649]
gi|84382324|gb|EAP98206.1| hypothetical protein JNB_14618 [Janibacter sp. HTCC2649]
Length=96
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (45%), Positives = 36/58 (63%), Gaps = 4/58 (6%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPR----RRRWLSKTEF 54
M+E++ R+LRND+ +LRRV AGE + +T G PVA L P R RRW+ +F
Sbjct 1 MTEISQRQLRNDSGEMLRRVEAGEVLVVTRRGVPVADLVPHREPVVKGPRRWVPAADF 58
>gi|340358515|ref|ZP_08681032.1| prevent-host-death family antitoxin [Actinomyces sp. oral taxon
448 str. F0400]
gi|339886365|gb|EGQ76023.1| prevent-host-death family antitoxin [Actinomyces sp. oral taxon
448 str. F0400]
Length=96
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/38 (53%), Positives = 29/38 (77%), Gaps = 0/38 (0%)
Query 4 VASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPV 41
+ RELRN +A +LRRV+AGE +T +G PVA+L+P+
Sbjct 15 ITHRELRNSSASILRRVQAGETFEVTNNGEPVALLSPM 52
>gi|325002767|ref|ZP_08123879.1| prevent-host-death family protein [Pseudonocardia sp. P1]
Length=97
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 35/59 (60%), Gaps = 2/59 (3%)
Query 2 SEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVR--PRRRRWLSKTEFLSRL 58
E+ ELRND A V+RRV GE +TV+GRPVA + P + +RR++ +E +
Sbjct 3 QEIRQSELRNDNASVMRRVAEGESFVVTVNGRPVADVVPHQRGTGKRRFVPVSELVDAF 61
>gi|336177396|ref|YP_004582771.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334858376|gb|AEH08850.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=87
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (42%), Positives = 33/56 (59%), Gaps = 2/56 (3%)
Query 3 EVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRL 58
E+ RELRND+ G+LR V G +T +G PVA L P+ RRR ++ + L+
Sbjct 8 EITQRELRNDSGGILRAVEQGSTFVVTRNGSPVAELVPL--RRRTFVPAAQVLAMF 61
>gi|15840067|ref|NP_335104.1| hypothetical protein MT0692.1 [Mycobacterium tuberculosis CDC1551]
gi|167967490|ref|ZP_02549767.1| hypothetical protein MtubH3_05422 [Mycobacterium tuberculosis
H37Ra]
gi|254549624|ref|ZP_05140071.1| hypothetical protein Mtube_04035 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|294992937|ref|ZP_06798628.1| hypothetical protein Mtub2_00120 [Mycobacterium tuberculosis
210]
gi|297633162|ref|ZP_06950942.1| hypothetical protein MtubK4_03510 [Mycobacterium tuberculosis
KZN 4207]
gi|297730142|ref|ZP_06959260.1| hypothetical protein MtubKR_03565 [Mycobacterium tuberculosis
KZN R506]
gi|313657469|ref|ZP_07814349.1| hypothetical protein MtubKV_03555 [Mycobacterium tuberculosis
KZN V2475]
gi|13880214|gb|AAK44918.1| hypothetical protein MT0692.1 [Mycobacterium tuberculosis CDC1551]
Length=108
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/48 (57%), Positives = 33/48 (69%), Gaps = 1/48 (2%)
Query 3 EVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLS 50
EV R+LRN T+ V+ V+AG VT+TV G PVA + P R RR RWLS
Sbjct 2 EVGVRDLRNRTSQVVDAVKAGVPVTLTVHGEPVADIVPHR-RRIRWLS 48
>gi|240171944|ref|ZP_04750603.1| prevent-host-death family protein [Mycobacterium kansasii ATCC
12478]
Length=82
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 0/50 (0%)
Query 4 VASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTE 53
+ R+LRN+ A V+ V AGE +T +G PVA L P+R RRR++++ E
Sbjct 5 IPQRDLRNNNAKVIDEVAAGETFVVTRNGEPVAELRPLRAVRRRFITRDE 54
>gi|333989900|ref|YP_004522514.1| prevent-host-death family protein [Mycobacterium sp. JDM601]
gi|333485868|gb|AEF35260.1| prevent-host-death family protein [Mycobacterium sp. JDM601]
Length=82
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (41%), Positives = 37/67 (56%), Gaps = 5/67 (7%)
Query 4 VASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLRGAQA 63
+ RELRND A V+ V GE +T +G PVA L P+R RR ++++ E A A
Sbjct 5 IPQRELRNDNAKVMDAVVGGETFIVTRNGEPVAELRPIRVTRRTFIARDEI-----AALA 59
Query 64 DPGLRND 70
D +R D
Sbjct 60 DAAVRID 66
>gi|152964325|ref|YP_001360109.1| hypothetical protein Krad_0355 [Kineococcus radiotolerans SRS30216]
gi|151358842|gb|ABS01845.1| hypothetical protein Krad_0355 [Kineococcus radiotolerans SRS30216]
Length=108
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/41 (49%), Positives = 26/41 (64%), Gaps = 0/41 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPV 41
M + R+LRND A +LR + GE T+T GRPVA +TP
Sbjct 1 MKTIRGRDLRNDYARILREIEGGETFTVTSDGRPVASITPY 41
>gi|284034137|ref|YP_003384068.1| prevent-host-death family protein [Kribbella flavida DSM 17836]
gi|283813430|gb|ADB35269.1| prevent-host-death family protein [Kribbella flavida DSM 17836]
Length=85
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/59 (45%), Positives = 32/59 (55%), Gaps = 2/59 (3%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLR 59
M + RELR + + ++RR AGE + ITVSGRP AVL P R W E LR
Sbjct 1 MDALGLRELRQNASDLVRRAEAGEHLVITVSGRPAAVLGPA--ERDHWRRYDEVADVLR 57
>gi|296169351|ref|ZP_06850976.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895973|gb|EFG75663.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=91
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/41 (54%), Positives = 29/41 (71%), Gaps = 0/41 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPV 41
MS V RELR + +LRRV AGE + IT GRP+A+L+P+
Sbjct 1 MSTVGVRELRQRASELLRRVEAGETIEITDRGRPIALLSPM 41
>gi|312196108|ref|YP_004016169.1| hypothetical protein FraEuI1c_2260 [Frankia sp. EuI1c]
gi|311227444|gb|ADP80299.1| hypothetical protein FraEuI1c_2260 [Frankia sp. EuI1c]
Length=90
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (38%), Positives = 33/56 (59%), Gaps = 2/56 (3%)
Query 3 EVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRL 58
++ RELR+D +LR V +GE +T G P+A LTP RR++++ E L+
Sbjct 11 KITQRELRDDAGDILRAVESGETFVVTRDGYPIAELTPA--RRQKFVPMDEILATF 64
>gi|300790924|ref|YP_003771215.1| hypothetical protein AMED_9124 [Amycolatopsis mediterranei U32]
gi|299800438|gb|ADJ50813.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=85
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/37 (60%), Positives = 26/37 (71%), Gaps = 0/37 (0%)
Query 7 RELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRP 43
REL DTAGVL RV+AGEDV IT G +A + P +P
Sbjct 2 RELNQDTAGVLARVKAGEDVEITERGTVIARIVPAQP 38
>gi|345301822|ref|YP_004831016.1| prevent-host-death family protein [Rhodothermus marinus SG0.5JP17-172]
gi|345113896|gb|AEN74727.1| prevent-host-death family protein [Rhodothermus marinus SG0.5JP17-172]
Length=79
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/47 (47%), Positives = 29/47 (62%), Gaps = 0/47 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRR 47
MSE+ + E + + +LRRV GE IT G PVA+L PV RR+R
Sbjct 1 MSEIGAYEAKTRFSELLRRVEKGECFVITRYGLPVAILKPVPSRRKR 47
>gi|152968334|ref|YP_001364118.1| hypothetical protein Krad_4395 [Kineococcus radiotolerans SRS30216]
gi|151362851|gb|ABS05854.1| hypothetical protein Krad_4395 [Kineococcus radiotolerans SRS30216]
Length=103
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/49 (43%), Positives = 29/49 (60%), Gaps = 4/49 (8%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVL----TPVRPRR 45
M ++ RELRND+ +LR +R GE + +T +G PV VL P P R
Sbjct 1 MRTISQRELRNDSGQILRALRDGEHLLVTSNGAPVGVLRMDPPPTEPHR 49
>gi|302864893|ref|YP_003833530.1| prevent-host-death family protein [Micromonospora aurantiaca
ATCC 27029]
gi|315501179|ref|YP_004080066.1| prevent-host-death family protein [Micromonospora sp. L5]
gi|302567752|gb|ADL43954.1| prevent-host-death family protein [Micromonospora aurantiaca
ATCC 27029]
gi|315407798|gb|ADU05915.1| prevent-host-death family protein [Micromonospora sp. L5]
Length=92
Score = 41.2 bits (95), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/41 (54%), Positives = 27/41 (66%), Gaps = 0/41 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPV 41
M ++A REL T+ VL RVRAGE V +T G P+A L PV
Sbjct 1 MEQIAVRELNQHTSRVLARVRAGETVEVTDRGEPIARLVPV 41
>gi|343925177|ref|ZP_08764707.1| putative prevent-host-death family protein [Gordonia alkanivorans
NBRC 16433]
gi|343764918|dbj|GAA11633.1| putative prevent-host-death family protein [Gordonia alkanivorans
NBRC 16433]
Length=83
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/49 (49%), Positives = 29/49 (60%), Gaps = 1/49 (2%)
Query 1 MSEVASRELRNDTAGVLRRV-RAGEDVTITVSGRPVAVLTPVRPRRRRW 48
M ++S E + VL V R G+ VTIT GRPVAVL P PR RR+
Sbjct 7 MKSISSTEAKARLNAVLAEVERTGQSVTITNHGRPVAVLAPATPRARRF 55
>gi|308232445|ref|ZP_07664086.1| antitoxin [Mycobacterium tuberculosis SUMu001]
gi|308370248|ref|ZP_07666900.1| antitoxin [Mycobacterium tuberculosis SUMu002]
gi|308371328|ref|ZP_07667137.1| antitoxin [Mycobacterium tuberculosis SUMu003]
22 more sequence titles
Length=91
Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/41 (52%), Positives = 28/41 (69%), Gaps = 0/41 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPV 41
M+ V R LR + +LRRV AGE + IT GRPVA+L+P+
Sbjct 1 MTSVGVRALRQRASELLRRVEAGETIEITDRGRPVALLSPL 41
>gi|268318429|ref|YP_003292147.1| prevent-host-death family protein [Rhodothermus marinus DSM 4252]
gi|262335963|gb|ACY49759.1| prevent-host-death family protein [Rhodothermus marinus DSM 4252]
Length=79
Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/52 (41%), Positives = 30/52 (58%), Gaps = 0/52 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKT 52
M E+ + E + + +LRRV GE IT G PVAVL P+ RR+R + +
Sbjct 1 MPEIGAYEAKTRFSELLRRVEKGERFVITRHGLPVAVLEPISFRRKRNIEEV 52
>gi|15610521|ref|NP_217902.1| hypothetical protein Rv3385c [Mycobacterium tuberculosis H37Rv]
gi|15842978|ref|NP_338015.1| hypothetical protein MT3493 [Mycobacterium tuberculosis CDC1551]
gi|31794565|ref|NP_857058.1| hypothetical protein Mb3417c [Mycobacterium bovis AF2122/97]
50 more sequence titles
Length=102
Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/41 (52%), Positives = 28/41 (69%), Gaps = 0/41 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPV 41
M+ V R LR + +LRRV AGE + IT GRPVA+L+P+
Sbjct 12 MTSVGVRALRQRASELLRRVEAGETIEITDRGRPVALLSPL 52
>gi|239989891|ref|ZP_04710555.1| hypothetical protein SrosN1_21485 [Streptomyces roseosporus NRRL
11379]
Length=92
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 33/59 (56%), Gaps = 2/59 (3%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRWLSKTEFLSRLR 59
M + RE RN++A V+ V GE IT +G VA L P+ R+R LS E ++R R
Sbjct 1 MKTITQREFRNNSAEVMDAVEGGETFHITRNGIEVAELRPI--SRKRQLSAEELVARHR 57
>gi|330469026|ref|YP_004406769.1| prevent-host-death family protein [Verrucosispora maris AB-18-032]
gi|328811997|gb|AEB46169.1| prevent-host-death family protein [Verrucosispora maris AB-18-032]
Length=69
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/39 (49%), Positives = 28/39 (72%), Gaps = 0/39 (0%)
Query 9 LRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRR 47
++ + + ++RR +AGE VTITV+GRP A+L PV R R
Sbjct 1 MQQNASDLVRRAQAGERVTITVAGRPAALLGPVSSRTWR 39
>gi|88810220|ref|ZP_01125477.1| hypothetical protein NB231_14108 [Nitrococcus mobilis Nb-231]
gi|88791850|gb|EAR22960.1| hypothetical protein NB231_14108 [Nitrococcus mobilis Nb-231]
Length=93
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/73 (35%), Positives = 40/73 (55%), Gaps = 13/73 (17%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTP------------VRPRRRRW 48
M ++ +REL+ + VLRR+R GE++++T G+ V L+P R RR W
Sbjct 1 MKQIGTRELKGHLSAVLRRMRDGEEISVTSHGKVVVRLSPPPAEGGVESDALARLRRHGW 60
Query 49 LSKTEFLSRLRGA 61
L + SR+RG+
Sbjct 61 L-RAGSGSRIRGS 72
>gi|83590917|ref|YP_430926.1| prevent-host-death protein [Moorella thermoacetica ATCC 39073]
gi|83573831|gb|ABC20383.1| Prevent-host-death protein [Moorella thermoacetica ATCC 39073]
Length=86
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/41 (47%), Positives = 24/41 (59%), Gaps = 0/41 (0%)
Query 1 MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPV 41
M + S+ELR +L +VRAGE IT G+PVA L P
Sbjct 1 MEFITSKELRVYAGKILEKVRAGERFAITHRGKPVAWLIPF 41
Lambda K H
0.319 0.135 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131009627400
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40