BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0631c Length=1097 Score E Sequences producing significant alignments: (Bits) Value gi|15607771|ref|NP_215145.1| exonuclease V gamma chain [Mycobact... 2152 0.0 gi|15840032|ref|NP_335069.1| exodeoxyribonuclease V, gamma subun... 2150 0.0 gi|148821833|ref|YP_001286587.1| exonuclease V gamma subunit rec... 2150 0.0 gi|121636550|ref|YP_976773.1| putative exonuclease V (gamma chai... 2150 0.0 gi|340625648|ref|YP_004744100.1| putative exonuclease V subunit ... 2147 0.0 gi|31791813|ref|NP_854306.1| exonuclease V gamma chain [Mycobact... 2147 0.0 gi|289744347|ref|ZP_06503725.1| exonuclease subunit V gamma recC... 1850 0.0 gi|289756713|ref|ZP_06516091.1| exodeoxyribonuclease subunit V g... 1731 0.0 gi|294996147|ref|ZP_06801838.1| exodeoxyribonuclease V, gamma su... 1691 0.0 gi|240169400|ref|ZP_04748059.1| exodeoxyribonuclease V subunit g... 1641 0.0 gi|298524121|ref|ZP_07011530.1| exonuclease V (gamma chain) recC... 1562 0.0 gi|333989284|ref|YP_004521898.1| exodeoxyribonuclease V (subunit... 1485 0.0 gi|41410192|ref|NP_963028.1| RecC [Mycobacterium avium subsp. pa... 1444 0.0 gi|336460586|gb|EGO39479.1| exodeoxyribonuclease V, gamma subuni... 1441 0.0 gi|118465804|ref|YP_883673.1| exodeoxyribonuclease V, gamma subu... 1437 0.0 gi|296168415|ref|ZP_06850295.1| exodeoxyribonuclease V gamma sub... 1437 0.0 gi|254776975|ref|ZP_05218491.1| exodeoxyribonuclease V, gamma su... 1436 0.0 gi|254823034|ref|ZP_05228035.1| exodeoxyribonuclease V, gamma su... 1420 0.0 gi|342858878|ref|ZP_08715532.1| exodeoxyribonuclease V, gamma su... 1400 0.0 gi|126433516|ref|YP_001069207.1| DNA helicase/exodeoxyribonuclea... 1382 0.0 gi|108797876|ref|YP_638073.1| DNA helicase/exodeoxyribonuclease ... 1373 0.0 gi|118616502|ref|YP_904834.1| exodeoxyribonuclease V (gamma chai... 1367 0.0 gi|289749132|ref|ZP_06508510.1| exonuclease subunit V gamma recC... 1366 0.0 gi|183980979|ref|YP_001849270.1| exodeoxyribonuclease V (gamma c... 1365 0.0 gi|169627504|ref|YP_001701153.1| exodeoxyribonuclease V subunit ... 1360 0.0 gi|120402222|ref|YP_952051.1| exodeoxyribonuclease V subunit gam... 1347 0.0 gi|118471772|ref|YP_885718.1| exodeoxyribonuclease V subunit gam... 1335 0.0 gi|5678921|gb|AAD46807.1|AF157643_1 RecC [Mycobacterium smegmatis] 1334 0.0 gi|307083131|ref|ZP_07492244.1| putative exodeoxyribonuclease V,... 1331 0.0 gi|145225705|ref|YP_001136383.1| exodeoxyribonuclease V subunit ... 1325 0.0 gi|315446056|ref|YP_004078935.1| DNA helicase/exodeoxyribonuclea... 1321 0.0 gi|284031864|ref|YP_003381795.1| exodeoxyribonuclease V subunit ... 1255 0.0 gi|307078568|ref|ZP_07487738.1| putative exodeoxyribonuclease V,... 1153 0.0 gi|326328710|ref|ZP_08195049.1| exodeoxyribonuclease V, gamma su... 1095 0.0 gi|307078567|ref|ZP_07487737.1| hypothetical protein TMKG_03913 ... 1000 0.0 gi|119714518|ref|YP_921483.1| DNA helicase/exodeoxyribonuclease ... 989 0.0 gi|258654034|ref|YP_003203190.1| exodeoxyribonuclease V subunit ... 911 0.0 gi|111018835|ref|YP_701807.1| exodeoxyribonuclease V gamma subun... 863 0.0 gi|226360934|ref|YP_002778712.1| exodeoxyribonuclease V gamma ch... 862 0.0 gi|229494271|ref|ZP_04388034.1| exodeoxyribonuclease V, gamma su... 829 0.0 gi|312139062|ref|YP_004006398.1| exodeoxyribonuclease v gamma su... 829 0.0 gi|226304346|ref|YP_002764304.1| exodeoxyribonuclease V gamma ch... 826 0.0 gi|325673660|ref|ZP_08153351.1| exodeoxyribonuclease V gamma sub... 824 0.0 gi|331697794|ref|YP_004334033.1| exodeoxyribonuclease V subunit ... 810 0.0 gi|333920628|ref|YP_004494209.1| exodeoxyribonuclease V subunit ... 803 0.0 gi|334336343|ref|YP_004541495.1| exodeoxyribonuclease V, gamma s... 801 0.0 gi|54024514|ref|YP_118756.1| putative RecC protein [Nocardia far... 775 0.0 gi|336118817|ref|YP_004573589.1| exodeoxyribonuclease V subunit ... 760 0.0 gi|296139999|ref|YP_003647242.1| exodeoxyribonuclease V subunit ... 747 0.0 gi|336321364|ref|YP_004601332.1| exodeoxyribonuclease V subunit ... 741 0.0 >gi|15607771|ref|NP_215145.1| exonuclease V gamma chain [Mycobacterium tuberculosis H37Rv] gi|148660403|ref|YP_001281926.1| exodeoxyribonuclease V subunit gamma [Mycobacterium tuberculosis H37Ra] gi|167969059|ref|ZP_02551336.1| exodeoxyribonuclease V subunit gamma [Mycobacterium tuberculosis H37Ra] 33 more sequence titles Length=1097 Score = 2152 bits (5577), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1097/1097 (100%), Positives = 1097/1097 (100%), Gaps = 0/1097 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV Sbjct 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL Sbjct 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP Sbjct 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA Sbjct 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD Sbjct 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 Query 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR Sbjct 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 Query 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR Sbjct 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 Query 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG Sbjct 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 Query 1081 ALAARLWLPLLAAEGSV 1097 ALAARLWLPLLAAEGSV Sbjct 1081 ALAARLWLPLLAAEGSV 1097 >gi|15840032|ref|NP_335069.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium tuberculosis CDC1551] gi|13880177|gb|AAK44883.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium tuberculosis CDC1551] gi|323720986|gb|EGB30051.1| exonuclease subunit V gamma recC [Mycobacterium tuberculosis CDC1551A] Length=1097 Score = 2150 bits (5572), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1096/1097 (99%), Positives = 1096/1097 (99%), Gaps = 0/1097 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRRRYGLDTVVHNTWR GLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV Sbjct 481 HRRRYGLDTVVHNTWRLGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL Sbjct 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP Sbjct 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA Sbjct 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD Sbjct 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 Query 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR Sbjct 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 Query 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR Sbjct 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 Query 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG Sbjct 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 Query 1081 ALAARLWLPLLAAEGSV 1097 ALAARLWLPLLAAEGSV Sbjct 1081 ALAARLWLPLLAAEGSV 1097 >gi|148821833|ref|YP_001286587.1| exonuclease V gamma subunit recC [Mycobacterium tuberculosis F11] gi|253797569|ref|YP_003030570.1| exonuclease subunit V gamma recC [Mycobacterium tuberculosis KZN 1435] gi|254549589|ref|ZP_05140036.1| exonuclease subunit V gamma recC [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] 11 more sequence titles Length=1097 Score = 2150 bits (5572), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1096/1097 (99%), Positives = 1096/1097 (99%), Gaps = 0/1097 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAG LAEFV Sbjct 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGMLAEFV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL Sbjct 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP Sbjct 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA Sbjct 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD Sbjct 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 Query 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR Sbjct 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 Query 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR Sbjct 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 Query 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG Sbjct 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 Query 1081 ALAARLWLPLLAAEGSV 1097 ALAARLWLPLLAAEGSV Sbjct 1081 ALAARLWLPLLAAEGSV 1097 >gi|121636550|ref|YP_976773.1| putative exonuclease V (gamma chain) recC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989022|ref|YP_002643709.1| putative exonuclease V gamma chain [Mycobacterium bovis BCG str. Tokyo 172] gi|289446186|ref|ZP_06435930.1| exonuclease subunit V gamma recC [Mycobacterium tuberculosis CPHL_A] 8 more sequence titles Length=1097 Score = 2150 bits (5570), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1096/1097 (99%), Positives = 1096/1097 (99%), Gaps = 0/1097 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRPA RSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPAERSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV Sbjct 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL Sbjct 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP Sbjct 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA Sbjct 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD Sbjct 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 Query 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR Sbjct 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 Query 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR Sbjct 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 Query 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG Sbjct 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 Query 1081 ALAARLWLPLLAAEGSV 1097 ALAARLWLPLLAAEGSV Sbjct 1081 ALAARLWLPLLAAEGSV 1097 >gi|340625648|ref|YP_004744100.1| putative exonuclease V subunit gamma [Mycobacterium canettii CIPT 140010059] gi|340003838|emb|CCC42968.1| putative exonuclease V (gamma chain) RECC (exodeoxyribonuclease V gamma chain)(exodeoxyribonuclease V polypeptide) [Mycobacterium canettii CIPT 140010059] Length=1097 Score = 2147 bits (5564), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1094/1097 (99%), Positives = 1095/1097 (99%), Gaps = 0/1097 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F+TTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FSTTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRP GRSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPVGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDL TITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLATITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV Sbjct 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL Sbjct 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP Sbjct 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA Sbjct 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD Sbjct 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 Query 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR Sbjct 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 Query 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR Sbjct 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 Query 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG Sbjct 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 Query 1081 ALAARLWLPLLAAEGSV 1097 ALAARLWLPLLAAEGSV Sbjct 1081 ALAARLWLPLLAAEGSV 1097 >gi|31791813|ref|NP_854306.1| exonuclease V gamma chain [Mycobacterium bovis AF2122/97] gi|31617400|emb|CAD93510.1| PROBABLE EXONUCLEASE V (GAMMA CHAIN) RECC (EXODEOXYRIBONUCLEASE V GAMMA CHAIN)(EXODEOXYRIBONUCLEASE V POLYPEPTIDE) [Mycobacterium bovis AF2122/97] Length=1097 Score = 2147 bits (5563), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1095/1097 (99%), Positives = 1095/1097 (99%), Gaps = 0/1097 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRPA RSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPAERSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV Sbjct 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL Sbjct 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP Sbjct 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA Sbjct 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 EWTVGERMLRDMLRGLH DDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD Sbjct 841 EWTVGERMLRDMLRGLHLDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 Query 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR Sbjct 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 Query 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR Sbjct 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 Query 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG Sbjct 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 Query 1081 ALAARLWLPLLAAEGSV 1097 ALAARLWLPLLAAEGSV Sbjct 1081 ALAARLWLPLLAAEGSV 1097 >gi|289744347|ref|ZP_06503725.1| exonuclease subunit V gamma recC [Mycobacterium tuberculosis 02_1987] gi|289684875|gb|EFD52363.1| exonuclease subunit V gamma recC [Mycobacterium tuberculosis 02_1987] Length=1007 Score = 1850 bits (4793), Expect = 0.0, Method: Compositional matrix adjust. Identities = 987/1007 (99%), Positives = 991/1007 (99%), Gaps = 1/1007 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR YGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAE V Sbjct 481 HRRSYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAELV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL Sbjct 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP Sbjct 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA Sbjct 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD Sbjct 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 Query 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR Sbjct 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 Query 961 EWSALCIGRSKTRNHIARRLF-VPPPDPVAVLRELVLLYDAGRREPL 1006 EWSALCIGRSKTRNHI ++ F + +VLLYDAGRREPL Sbjct 961 EWSALCIGRSKTRNHIGQKAFRAAAGPGGGIPGRVVLLYDAGRREPL 1007 >gi|289756713|ref|ZP_06516091.1| exodeoxyribonuclease subunit V gamma [Mycobacterium tuberculosis T85] gi|289712277|gb|EFD76289.1| exodeoxyribonuclease subunit V gamma [Mycobacterium tuberculosis T85] Length=950 Score = 1731 bits (4483), Expect = 0.0, Method: Compositional matrix adjust. Identities = 929/952 (98%), Positives = 932/952 (98%), Gaps = 5/952 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV Sbjct 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL Sbjct 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP Sbjct 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA Sbjct 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD Sbjct 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 Query 901 GHGQAHDVDVDL---GDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIG 949 GHGQAHD+++DL R G P GRTVS TYS PKHVLPA IG Sbjct 901 GHGQAHDINIDLRVRAATERHGG--HPCSAGRTVSETYSNWRPKHVLPARIG 950 >gi|294996147|ref|ZP_06801838.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium tuberculosis 210] Length=868 Score = 1691 bits (4380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 860/861 (99%), Positives = 861/861 (100%), Gaps = 0/861 (0%) Query 237 DLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAA 296 +LHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAA Sbjct 8 NLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAA 67 Query 297 RATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLRE 356 RATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLRE Sbjct 68 RATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLRE 127 Query 357 VLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALT 416 VLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALT Sbjct 128 VLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALT 187 Query 417 QTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWG 476 QTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWG Sbjct 188 QTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWG 247 Query 477 FDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRL 536 FDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRL Sbjct 248 FDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRL 307 Query 537 AEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSR 596 AEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSR Sbjct 308 AEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSR 367 Query 597 AAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPR 656 AAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPR Sbjct 368 AAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPR 427 Query 657 LSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVP 716 LSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVP Sbjct 428 LSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVP 487 Query 717 LAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAG 776 LAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAG Sbjct 488 LAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAG 547 Query 777 KRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQV 836 KRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQV Sbjct 548 KRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQV 607 Query 837 DALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAAL 896 DALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAAL Sbjct 608 DALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAAL 667 Query 897 AHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQ 956 AHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQ Sbjct 668 AHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQ 727 Query 957 EPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 EPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW Sbjct 728 EPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 787 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE 1076 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE Sbjct 788 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE 847 Query 1077 TRLGALAARLWLPLLAAEGSV 1097 TRLGALAARLWLPLLAAEGSV Sbjct 848 TRLGALAARLWLPLLAAEGSV 868 >gi|240169400|ref|ZP_04748059.1| exodeoxyribonuclease V subunit gamma [Mycobacterium kansasii ATCC 12478] Length=1094 Score = 1641 bits (4249), Expect = 0.0, Method: Compositional matrix adjust. Identities = 863/1094 (79%), Positives = 936/1094 (86%), Gaps = 3/1094 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADP PDPFA ELVLVAARG+ERWLSQ LS VLG Sbjct 1 MALHLHRAERTDLLADGLGALLADPLPDPFASELVLVAARGMERWLSQHLSQVLGSRGAH 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCA + FR+PQSLIAEITGT D DPWSPEA+ WPLL VID LDEPWCR+LA+HLGH Sbjct 61 GDGVCAAVTFRSPQSLIAEITGTADTDPWSPEAMTWPLLEVIDTVLDEPWCRSLATHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F T EAELRRGRRYSVARRLAGLFASYARQRP LLA WLDG L + DLAWQP LWR Sbjct 121 FDTDAVEAELRRGRRYSVARRLAGLFASYARQRPALLAGWLDGHLDGVDADLAWQPELWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV V A+PPH+RH++T+ARL GPADLPARLSLFGHTRLACTDVQLL ALA HHDLHL Sbjct 181 ALVAAVAAEPPHLRHERTVARLTAGPADLPARLSLFGHTRLACTDVQLLGALATHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD+LW+ALAG GA + RRQDTS AA+HPLL TLGRD+RELQRALPAA ATD Sbjct 241 WLPHPSDDLWQALAGVHGA---VQRRQDTSGHAARHPLLHTLGRDLRELQRALPAAPATD 297 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLG TTKPDTLLGWLQADIA N RP GR L+ DRSVQVHACHGPARQ+DVLREVLLG Sbjct 298 EFLGGTTKPDTLLGWLQADIAANEARPDGRRLAAGDRSVQVHACHGPARQVDVLREVLLG 357 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDI+TYAPLIVAGFGLGEVAG HP HRLRVRLADRALTQTNP Sbjct 358 LLEDDPTLQPRDIVVMCPDIETYAPLIVAGFGLGEVAGLGHPGHRLRVRLADRALTQTNP 417 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VAAELL IA RATASQ+LNLAQA PVRA+FGF+DDDLD IT WVR+SNIRWGFD Sbjct 418 LLGVAAELLVIAGGRATASQVLNLAQAIPVRARFGFSDDDLDVITDWVRQSNIRWGFDRR 477 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR YGL+ +HNTWRFG+DRILTGVAMS+DS+AWLDTALPLDDVGSNRV+LAGRLAE+V Sbjct 478 HRRPYGLERFLHNTWRFGIDRILTGVAMSDDSRAWLDTALPLDDVGSNRVDLAGRLAEYV 537 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 RLHHVV LSGA PL WLDAL G+ L+T C++ WQ+AQ+QREFADV A+AG RAA L Sbjct 538 ARLHHVVERLSGAMPLTDWLDALTDGVGLITRCDEDWQQAQLQREFADVRAQAGDRAATL 597 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDV ALLDA LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCL+GLDDG+FPR S P Sbjct 598 LRLPDVSALLDASLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLLGLDDGIFPRHSAP 657 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDD+LAR PMTGERD+RSEDRQLLLDAIG+AT+TLVITYTGADE TGQPRPPAVPLAEL Sbjct 658 DGDDLLARAPMTGERDVRSEDRQLLLDAIGSATETLVITYTGADEHTGQPRPPAVPLAEL 717 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALD+TT APVR +IL HPLQPFDRKNVTPGAL+ A PFTFDPAALAAA+AA G RC Sbjct 718 LDALDRTTVAPVRRQILTRHPLQPFDRKNVTPGALVPATPFTFDPAALAAAEAATGTRCA 777 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 P FI RLP PP DVTLADLLDFFK+PVKGFFRALD TLPWDVDTVED +PV++DAL Sbjct 778 PAPFIGDRLPEPPTGDVTLADLLDFFKNPVKGFFRALDVTLPWDVDTVEDEMPVEIDALQ 837 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 WTVG+R+L D+LRG+HPD AA++EWRRGTLPPGR+GVR+ KEI + A LA AAL H Sbjct 838 AWTVGDRILHDILRGMHPDAAANAEWRRGTLPPGRIGVRKTKEILDCACQLARAALPHMA 897 Query 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 G A+D+D+DLG GRRLSGTVTPV+G VSVTYSKLAPKHVL +WIGLV LAAQ PGR Sbjct 898 ADGDAYDIDIDLGTGRRLSGTVTPVYGEHLVSVTYSKLAPKHVLTSWIGLVALAAQLPGR 957 Query 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 EW+ALCIGR +RN ARR F P PDPVAVLR+LV LYDAGRREPLPLPLKTS AWAQAR Sbjct 958 EWAALCIGRGASRNRTARREFAPAPDPVAVLRDLVSLYDAGRREPLPLPLKTSYAWAQAR 1017 Query 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 RDG DP ARE W++NRFR GDD PAH+R WG + F VLLG PR GEE AGE TRLG Sbjct 1018 RDGDDPAAAARERWESNRFRDGDDREPAHLRVWGDKPAFGVLLGSPRPGEETAGEGTRLG 1077 Query 1081 ALAARLWLPLLAAE 1094 ALAARLWLPLL AE Sbjct 1078 ALAARLWLPLLNAE 1091 >gi|298524121|ref|ZP_07011530.1| exonuclease V (gamma chain) recC [Mycobacterium tuberculosis 94_M4241A] gi|298493915|gb|EFI29209.1| exonuclease V (gamma chain) recC [Mycobacterium tuberculosis 94_M4241A] Length=906 Score = 1562 bits (4044), Expect = 0.0, Method: Compositional matrix adjust. Identities = 795/797 (99%), Positives = 795/797 (99%), Gaps = 0/797 (0%) Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 FLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 110 NFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 169 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 170 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 229 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 230 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 289 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR YGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV Sbjct 290 HRRGYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 349 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 350 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 409 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 410 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 469 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 720 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL Sbjct 470 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAEL 529 Query 721 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 780 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP Sbjct 530 LDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCP 589 Query 781 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 840 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA Sbjct 590 PTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALA 649 Query 841 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 900 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD Sbjct 650 EWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRD 709 Query 901 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 960 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR Sbjct 710 GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGR 769 Query 961 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 1020 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR Sbjct 770 EWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQAR 829 Query 1021 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 1080 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG Sbjct 830 RDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLG 889 Query 1081 ALAARLWLPLLAAEGSV 1097 ALAARLWLPLLAAEGSV Sbjct 890 ALAARLWLPLLAAEGSV 906 >gi|333989284|ref|YP_004521898.1| exodeoxyribonuclease V (subunit gamma) RecC [Mycobacterium sp. JDM601] gi|333485252|gb|AEF34644.1| exodeoxyribonuclease V (gamma chain) RecC [Mycobacterium sp. JDM601] Length=1101 Score = 1485 bits (3844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 785/1103 (72%), Positives = 892/1103 (81%), Gaps = 18/1103 (1%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M LHLHRAERTD L DGLGALL P DPFA +LVLV ARGVERWLSQRLS VLG G G Sbjct 5 MGLHLHRAERTDALVDGLGALLVSPPADPFALDLVLVPARGVERWLSQRLSHVLGAGSG- 63 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG+ FR+P SLIAEITGT DDPWSP+A++WPLL+VIDASLDE WCRTLA+HLGH Sbjct 64 GDGVCAGVEFRSPASLIAEITGTDGDDPWSPDAMSWPLLSVIDASLDEDWCRTLATHLGH 123 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLG-----ELPGDLAWQ 175 F D +A++RRGRRY+VARRLAGLFASYARQRP +LA WLDG G +L DLAWQ Sbjct 124 FHDGD-DAQVRRGRRYAVARRLAGLFASYARQRPAMLADWLDGGCGDGAGGQLDPDLAWQ 182 Query 176 PPLWRALVTTVGADPPHVRHDKTIARLRDGPAD-LPARLSLFGHTRLACTDVQLLDALAV 234 PPLWRAL + ADPPHVRH + + RLR PAD LPARL+LFGHTRL+CTD++LLDALA Sbjct 183 PPLWRALAAAIPADPPHVRHRRAVDRLRGAPADTLPARLNLFGHTRLSCTDIELLDALAT 242 Query 235 HHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALP 294 HH+LHLWLPHPSD LW+AL G GA +PR D SR A HPLL+TLGRD+RELQRALP Sbjct 243 HHELHLWLPHPSDALWQALRGVHGA---VPRADDDSRDRATHPLLQTLGRDLRELQRALP 299 Query 295 AARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVL 354 AA A D++L A +P TLLGWLQADIA NA RP GR + ADRSVQVHACHGPARQ+DVL Sbjct 300 AAPAGDDYLAAAARPGTLLGWLQADIAANAVRPHGRCATRADRSVQVHACHGPARQVDVL 359 Query 355 REVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRA 414 REVLLGLLEDDPTLQPRDIVVMCPDI+TYAPLIVAGFGLGE+AG+ HPAH LRV+LADRA Sbjct 360 REVLLGLLEDDPTLQPRDIVVMCPDIETYAPLIVAGFGLGELAGESHPAHSLRVQLADRA 419 Query 415 LTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIR 474 LTQTNPLL VA +LL IA++RATAS +LNLAQAAPVRA+FGF DDDL+ IT+WV+++N+R Sbjct 420 LTQTNPLLGVAEQLLGIADSRATASAVLNLAQAAPVRARFGFTDDDLEDITSWVQQANVR 479 Query 475 WGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAG 534 W FD HR YGL T+ HNTWRFGLDRILTGVAMSEDS+AWL TALPLDDVGSNRVELAG Sbjct 480 WSFDAAHREPYGLKTIQHNTWRFGLDRILTGVAMSEDSRAWLGTALPLDDVGSNRVELAG 539 Query 535 RLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLT--ACNDGWQRAQVQREFADVLAR 592 RLAEFV RL L+G+RPL W+ AL G+ LT + +DGWQ Q+QRE ADV+ Sbjct 540 RLAEFVARLQTAADALTGSRPLTEWIAALIDGVTALTRVSIDDGWQTGQLQRELADVVIE 599 Query 593 AGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG 652 AGS AA L+L DVRALL QLAGRPTRANFRTG LTVCTMVPMRSVPHRVVCLVGLDDG Sbjct 600 AGSHAATALQLSDVRALLAGQLAGRPTRANFRTGGLTVCTMVPMRSVPHRVVCLVGLDDG 659 Query 653 VFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRP 712 VFPR H DGDDVL R P+TGERD+RSEDRQLLLDA+ AAT+TLVITY GADE TG+ RP Sbjct 660 VFPRADHVDGDDVLCRLPLTGERDVRSEDRQLLLDAVCAATETLVITYAGADESTGKLRP 719 Query 713 PAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGAL-LGAKPFTFDPAALAAA 771 PAVPLAELLDALD T APVRE+++V HPLQPFD +NV PGAL + +PFTFDP AL AA Sbjct 720 PAVPLAELLDALDIATEAPVREQVVVRHPLQPFDIRNVEPGALGVPGRPFTFDPTALTAA 779 Query 772 QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831 +AAAGKR PT + LP PP ADV L +L FFKDPVKG+FRALDYTLPW+V+ V+D+ Sbjct 780 EAAAGKRTEPTDTFAALLPPPPVADVELEELTRFFKDPVKGYFRALDYTLPWEVEGVQDA 839 Query 832 IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891 +PV+++ LA+W VG+RML DML G+HPDDAA++EWRRGTLPPGRLG+R A EIR+ +R L Sbjct 840 MPVEIEGLAQWAVGDRMLSDMLTGMHPDDAANAEWRRGTLPPGRLGMRTACEIRDLSRAL 899 Query 892 AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951 A AA AHR G A D+DVDL GRRL+GTV+ V+G RTVSV YS+LAPKHVL AWI L+ Sbjct 900 AEAAFAHRVGDPDAFDIDVDL-RGRRLTGTVSGVYGSRTVSVVYSRLAPKHVLAAWIPLL 958 Query 952 TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011 LAAQ P +WSALCIGR RNHI +RLF+PPPDPVAVL +LV +YDAGRREPLPLPL Sbjct 959 ALAAQYPDTQWSALCIGRGMGRNHIRQRLFLPPPDPVAVLGDLVAIYDAGRREPLPLPLA 1018 Query 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071 TSCAWA ARR+ +DP AR W +F G+ AH++ WG AP + L PR GEE Sbjct 1019 TSCAWAAARREKEDPVGAARGAW-GGKF--GESTDAAHIKVWGQNAPLDALRDVPRPGEE 1075 Query 1072 VAGEETRLGALAARLWLPLLAAE 1094 V GE TRLGALA RLW PLL+AE Sbjct 1076 VTGEGTRLGALAVRLWAPLLSAE 1098 >gi|41410192|ref|NP_963028.1| RecC [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399026|gb|AAS06644.1| RecC [Mycobacterium avium subsp. paratuberculosis K-10] Length=1096 Score = 1444 bits (3738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 776/1098 (71%), Positives = 876/1098 (80%), Gaps = 10/1098 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M LHLHRAERTDLLADGLGALLA+P DPFA ELV+V ARGVERWLSQRLS VLG Sbjct 1 MPLHLHRAERTDLLADGLGALLANPPADPFALELVVVPARGVERWLSQRLSHVLGRARD- 59 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG+ FR+P SLIAEITGT DDDPWSP+ALAWPLL ID SLDEPWCRTLA+HLGH Sbjct 60 GDGVCAGVQFRSPGSLIAEITGTADDDPWSPDALAWPLLEAIDCSLDEPWCRTLATHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F T AEAELRR RRY ARRLAGLFA YARQRP LL WLDGD G+L DL WQPPLWR Sbjct 120 F-DTGAEAELRRTRRYEAARRLAGLFAGYARQRPRLLVDWLDGDPGDLDEDLRWQPPLWR 178 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 AL+ V ADPPHVRH +TIARLR P+DLP RLSLFGHTRLACTDV+LLDALA HHDLHL Sbjct 179 ALLARVAADPPHVRHAETIARLRRAPSDLPQRLSLFGHTRLACTDVELLDALATHHDLHL 238 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LWRALAG G ++PRR DTS RA HPLL TLGRD+RELQR LPA TD Sbjct 239 WLPHPSDRLWRALAGTHG---VIPRRDDTSHRAVAHPLLATLGRDLRELQRGLPADPRTD 295 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E+L +PDTLLGWLQ+DIA NA RP GRSL+ DRSVQ+H CHGPARQ+DVLRE+LLG Sbjct 296 EYLAGDARPDTLLGWLQSDIAANAVRPVGRSLAAGDRSVQIHNCHGPARQVDVLREMLLG 355 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTLQPRDI+VMCPDI++YAPLI+A FGLG+V HPAH+LRVRLADR+L QTNP Sbjct 356 LLADDPTLQPRDILVMCPDIESYAPLIMADFGLGDVVHGAHPAHQLRVRLADRSLIQTNP 415 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VAA+LL +A R AS++LNLAQ VRA+FGF DDDLDTIT WVR++NIRWG D Sbjct 416 LLGVAAQLLALAGGRVRASEVLNLAQTPAVRARFGFTDDDLDTITGWVRQANIRWGLDRQ 475 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR Y +D VHNTWRFG+DRIL GVAMS+DS AW+D LPLDDV SNRV+LAG+LAEFV Sbjct 476 HRRPYHVD-FVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVQLAGQLAEFV 534 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 RL HV+ L+GARPL WL A+A GI LLT D WQ Q+QREFA V A+AGSRA Sbjct 535 ARLQHVLDSLTGARPLTDWLTAVADGIALLTRVRDADEWQSGQLQREFAAVSAQAGSRAD 594 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 +LRLPDVRALL L+GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG+FPRL Sbjct 595 TVLRLPDVRALLTRHLSGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPRLG 654 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD LAR PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQPRPPAVPLA Sbjct 655 VVDGDDALARCPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLA 714 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKR 778 ELLD LD TT+ PVR+RI+V HPLQPFD +N+ PG L+ PF+FDP L AA AA G+ Sbjct 715 ELLDTLDITTAEPVRDRIVVRHPLQPFDIRNIIPGELVPGVPFSFDPTVLRAAHAATGEH 774 Query 779 CPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDA 838 C P FIS LP PP ADV LADL+ FFKDPV+GFFRAL +TLP DVD V+D++PV +DA Sbjct 775 CEPPKFISAPLPPPPPADVILADLVGFFKDPVQGFFRALQFTLPHDVDGVQDAMPVDIDA 834 Query 839 LAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAH 898 L EWTVG+RMLRDMLRG+ P+DA +EWRRGTLPPG+LG RR EIR++A LA A H Sbjct 835 LQEWTVGDRMLRDMLRGMTPEDARQAEWRRGTLPPGQLGWRRVTEIRDQAARLALEAHQH 894 Query 899 R-DGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQE 957 R + G AHDVD+DLG GRRL+GTVTPV+G R V+VTYS+L +H+L +WI L+ LAA + Sbjct 895 RAEQPGGAHDVDIDLGRGRRLTGTVTPVYGDRLVAVTYSRLDGRHLLESWIPLLALAAHD 954 Query 958 PGREWSALCIGRSKTRNHI-ARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 GR+WSA+CIGR + I +RL P DPV +LRELV +YDAGRREP+PLPLKTS AW Sbjct 955 RGRDWSAVCIGRMRRGTGIRVQRLGSPDDDPVELLRELVSIYDAGRREPIPLPLKTSYAW 1014 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE 1076 A AR G DP AR W+++ PG+D APAHVRAWG AP + L+ R GEE GE+ Sbjct 1015 AAARYGGDDPVAEARYRWKSSDRYPGEDQAPAHVRAWGRGAPLDDLMRPVRPGEECDGED 1074 Query 1077 TRLGALAARLWLPLLAAE 1094 RLGA AARLWLP+L AE Sbjct 1075 NRLGAYAARLWLPMLRAE 1092 >gi|336460586|gb|EGO39479.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium avium subsp. paratuberculosis S397] Length=1096 Score = 1441 bits (3730), Expect = 0.0, Method: Compositional matrix adjust. Identities = 774/1098 (71%), Positives = 874/1098 (80%), Gaps = 10/1098 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M LHLHRAERTDLLADGLGALLA+P DPFA ELV+V ARGVERWLSQRLS LG Sbjct 1 MPLHLHRAERTDLLADGLGALLANPPADPFALELVVVPARGVERWLSQRLSHALGRARD- 59 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG+ FR+P SLIAEITGT DDDPWSP+ALAWPLL ID SLDEPWCRTLA+HLGH Sbjct 60 GDGVCAGVQFRSPGSLIAEITGTADDDPWSPDALAWPLLEAIDCSLDEPWCRTLATHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F T AEAELRR RRY ARRLAGLFA YARQRP LL WLDGD G+L DL WQPPLWR Sbjct 120 F-DTGAEAELRRTRRYEAARRLAGLFAGYARQRPRLLVDWLDGDPGDLDEDLRWQPPLWR 178 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 AL+ V ADPPHVRH +TIARLR P+DLP RLSLFGHTRLACTDV+LLDALA HHDLHL Sbjct 179 ALLARVAADPPHVRHAETIARLRRAPSDLPQRLSLFGHTRLACTDVELLDALATHHDLHL 238 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LWRALAG G ++PRR DTS RA HPLL TLGRD+RELQR LPA TD Sbjct 239 WLPHPSDRLWRALAGTHG---VIPRRDDTSHRAVAHPLLATLGRDLRELQRGLPADPRTD 295 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E+L +PDTLLGWLQ+DIA NA RP GRSL+ DRSVQ+H CHGPARQ+DVLRE+LLG Sbjct 296 EYLAGDARPDTLLGWLQSDIAANAVRPVGRSLAAGDRSVQIHNCHGPARQVDVLREMLLG 355 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTLQPRDI+VMCPDI++YAPLI+A FGLG+V HPAH+LRVRLADR+L QTNP Sbjct 356 LLADDPTLQPRDILVMCPDIESYAPLIMADFGLGDVVHGAHPAHQLRVRLADRSLIQTNP 415 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VAA+LL +A R AS++LNLAQ VRA+FGF DDDLDTIT WVR++NIRWG D Sbjct 416 LLGVAAQLLALAGGRVRASEVLNLAQTPAVRARFGFTDDDLDTITGWVRQANIRWGLDRQ 475 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR Y +D VHNTWRFG+DRIL GVAMS+DS AW+D LPLDDV SNRV+LAG+LAEFV Sbjct 476 HRRPYHVD-FVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVQLAGQLAEFV 534 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 RL HV+ L+GARPL WL A+A GI LLT D WQ Q+QREFA V A+AGSRA Sbjct 535 ARLQHVLDSLTGARPLTDWLTAVADGIALLTRVRDADEWQSGQLQREFAAVSAQAGSRAD 594 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 +LRLPDVRALL L+GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG+FPRL Sbjct 595 TVLRLPDVRALLTRHLSGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPRLG 654 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD LAR PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQPRPPAVPLA Sbjct 655 VVDGDDALARCPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLA 714 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKR 778 ELLD LD TT+ PVR+RI+V HPLQPFD +N+ PG L+ PF+FDP L AA AA G+ Sbjct 715 ELLDTLDITTAEPVRDRIVVRHPLQPFDIRNIIPGELVPGVPFSFDPTVLRAAHAATGEH 774 Query 779 CPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDA 838 C P FIS LP PP ADV LADL+ FFKDPV+GFFRAL +TLP DVD V+D++PV +DA Sbjct 775 CEPPKFISAPLPPPPPADVILADLVGFFKDPVQGFFRALQFTLPHDVDGVQDAMPVDIDA 834 Query 839 LAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAH 898 L EWTVG+ MLRDMLRG+ P+DA +EWRRGTLPPG+LG RR EIR++A LA A H Sbjct 835 LQEWTVGDHMLRDMLRGMTPEDARQAEWRRGTLPPGQLGWRRVTEIRDQAARLALEAHQH 894 Query 899 R-DGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQE 957 R + G AHDVD+DLG GRRL+GTVTPV+G R V+VTYS+L +H+L +WI L+ LAA + Sbjct 895 RAEQPGGAHDVDIDLGRGRRLTGTVTPVYGDRLVAVTYSRLDGRHLLESWIPLLALAAHD 954 Query 958 PGREWSALCIGRSKTRNHI-ARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 GR+WSA+CIGR + I +RL P DPV +LRELV +YDAGRREP+PLPLKTS AW Sbjct 955 RGRDWSAVCIGRMRRGTGIRVQRLGSPDDDPVELLRELVSIYDAGRREPIPLPLKTSYAW 1014 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE 1076 A AR G DP AR W+++ PG+D APAHVRAWG AP + L+ R GEE GE+ Sbjct 1015 AAARYGGDDPVAEARYRWKSSDRYPGEDQAPAHVRAWGRGAPLDDLMRPVRPGEECDGED 1074 Query 1077 TRLGALAARLWLPLLAAE 1094 RLGA AARLWLP+L AE Sbjct 1075 NRLGAYAARLWLPMLRAE 1092 >gi|118465804|ref|YP_883673.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium avium 104] gi|118167091|gb|ABK67988.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium avium 104] Length=1096 Score = 1437 bits (3720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 772/1098 (71%), Positives = 875/1098 (80%), Gaps = 10/1098 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M LHLHRAERTDLLADGLGALLA+P DPFA ELV+V ARGVERWLSQRLS VLG Sbjct 1 MPLHLHRAERTDLLADGLGALLANPPADPFALELVVVPARGVERWLSQRLSHVLGRARD- 59 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG+ FR+P SLIAEITGT +DDPWSP+ALAWPLL ID SLDEPWCRTLA+HLGH Sbjct 60 GDGVCAGVQFRSPGSLIAEITGTAEDDPWSPDALAWPLLEAIDCSLDEPWCRTLATHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F + AEAELRR RRY ARRLAGLFA YARQRP LL WLDGD G+L DL WQPPLWR Sbjct 120 FHSG-AEAELRRTRRYEAARRLAGLFAGYARQRPRLLVDWLDGDPGDLDEDLRWQPPLWR 178 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV V ADPPHVRH +TIARLR P+DLP RLSLFGHTRLACTDV+LLDALA HHDLHL Sbjct 179 ALVARVAADPPHVRHAETIARLRRAPSDLPQRLSLFGHTRLACTDVELLDALATHHDLHL 238 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LWRALAG +G++PRR DTS RA HPLL TLGRD+RELQR LPA TD Sbjct 239 WLPHPSDRLWRALAG---TNGVIPRRDDTSHRAVAHPLLATLGRDLRELQRGLPADPRTD 295 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E+L +PDTLLGWLQ+DIA NA RP GRSL+ DRSVQ+H CHGPARQ+DVLREVLLG Sbjct 296 EYLAGDARPDTLLGWLQSDIAANAIRPVGRSLAAGDRSVQIHNCHGPARQVDVLREVLLG 355 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTLQPRDI+VMCPDI++YAPLI+A FGLG+V HPAH+LRVRLADR+L QTNP Sbjct 356 LLADDPTLQPRDILVMCPDIESYAPLIMADFGLGDVVHGAHPAHQLRVRLADRSLIQTNP 415 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VAA+LL +A R AS++LNLAQ VRA+FGF DDDL+ IT WVR++NIRWG D Sbjct 416 LLGVAAQLLALAGGRVRASEVLNLAQTPAVRARFGFTDDDLEAITGWVRQANIRWGLDRQ 475 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR Y +D VHNTWRFG+DRIL GVAMS+DS AW+D LPLDDV SNRV+LAG+LAEFV Sbjct 476 HRRPYHVD-FVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVQLAGQLAEFV 534 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 RL HV+ L+GARPL WL A+A GI LLT D WQ Q+QREFA V A+AGSRA Sbjct 535 ARLQHVLDSLTGARPLTEWLTAVADGIALLTRVRDADEWQSGQLQREFAAVSAQAGSRAD 594 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 +LRLPDVRALL L+GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG+FPRL Sbjct 595 TVLRLPDVRALLTRHLSGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPRLG 654 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD L+R PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQPRPPAVPLA Sbjct 655 VVDGDDALSRCPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLA 714 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKR 778 ELLD LD TT+ PVR+RI+V HPLQPFD +NV P L+ PF+FDP L AA+AA G+ Sbjct 715 ELLDTLDITTAEPVRDRIVVRHPLQPFDIRNVIPDELVPGVPFSFDPTVLRAARAATGEH 774 Query 779 CPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDA 838 C P FIS LP PP ADV LADL+ FFKDPV+GFFRAL +TLP DVD V+D++PV +DA Sbjct 775 CEPPKFISAPLPPPPPADVILADLVGFFKDPVQGFFRALQFTLPHDVDGVQDAMPVDIDA 834 Query 839 LAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAH 898 L EWTVG+RMLRDMLRG+ P+DA +EWRRGTLPPG+LG RR EIR++A LA A H Sbjct 835 LQEWTVGDRMLRDMLRGMTPEDARQAEWRRGTLPPGQLGWRRVTEIRDQAARLAREAHQH 894 Query 899 R-DGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQE 957 R + G AHDVD+DLG GRRL+GTVTPV+G R V+VTYS+L +H+L +WI L+ LAA + Sbjct 895 RAEQPGGAHDVDIDLGRGRRLTGTVTPVYGNRLVAVTYSRLDGRHLLESWIPLLALAAHD 954 Query 958 PGREWSALCIGRSKTRNHI-ARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 GR+WSA+CIGR + I +RL P DPV +L ELV +YDAGRREP+PLPLKTS AW Sbjct 955 RGRDWSAVCIGRMRRGTGIRVQRLGSPDDDPVELLHELVSIYDAGRREPIPLPLKTSYAW 1014 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE 1076 A AR G DP AR W+++ PG+D APAHVRAWG AP + L+ R GEE GE+ Sbjct 1015 AAARYGGDDPVAEARYRWKSSDRYPGEDQAPAHVRAWGRGAPLDDLMQPVRPGEECDGED 1074 Query 1077 TRLGALAARLWLPLLAAE 1094 RLGA AARLWLP+L AE Sbjct 1075 NRLGAYAARLWLPMLRAE 1092 >gi|296168415|ref|ZP_06850295.1| exodeoxyribonuclease V gamma subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896709|gb|EFG76344.1| exodeoxyribonuclease V gamma subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length=1090 Score = 1437 bits (3719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 784/1101 (72%), Positives = 880/1101 (80%), Gaps = 16/1101 (1%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLA P DPFA+ELVLV ARGVERWLSQRLS VLG G Sbjct 1 MALHLHRAERTDLLADGLGALLAHPLTDPFAEELVLVPARGVERWLSQRLSHVLGRARG- 59 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG+AFR+P SLIAE+TGT D+DPWSP+A+AWPLLAVID+SLDEPWCRTLA+HLGH Sbjct 60 GDGVCAGVAFRSPASLIAELTGTADEDPWSPDAMAWPLLAVIDSSLDEPWCRTLATHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FA T+AEAELRRGRRYSVARRLAGLFASYARQRP LLA WL GD G+L DLAWQP LWR Sbjct 120 FAPTEAEAELRRGRRYSVARRLAGLFASYARQRPRLLADWLAGDAGDLDPDLAWQPELWR 179 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV V ADPPHVRH T+ RLRDGP LP RLSLFGHTRLA TDV+LLDA+A HHDLHL Sbjct 180 ALVAAVPADPPHVRHHNTVTRLRDGPGGLPPRLSLFGHTRLASTDVELLDAVAAHHDLHL 239 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LWRAL G +GA +PRR DTS R+ HPLL TLGRD+RELQRALPAA TD Sbjct 240 WLPHPSDHLWRALGGDRGA---IPRRADTSHRSVGHPLLATLGRDLRELQRALPAAAQTD 296 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E L A +P TLLGWLQADIA NA RP GR L+ DRSVQVH CHGPARQ+DVLREVLLG Sbjct 297 ECLPAPARPATLLGWLQADIAANAVRPQGRILAADDRSVQVHNCHGPARQVDVLREVLLG 356 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL+DDPTLQPRDI+VMCPDI+TYAPLIVA FGLG+V HPAHRLRVRLADR+ QTNP Sbjct 357 LLQDDPTLQPRDILVMCPDIETYAPLIVADFGLGDVVHGAHPAHRLRVRLADRSPLQTNP 416 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VAA+LL +A +R TAS++L+ A+AAPVRA+FG DDDL+ I WVR++NIRWGFD Sbjct 417 LLGVAAQLLALAGSRVTASEVLDFAEAAPVRARFGLTDDDLEAIARWVRQANIRWGFDQE 476 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR Y +D VHNTWRFG+DR+L GVAMS+DS AW+D LPLDDV SNRVELAG+ AEFV Sbjct 477 HRRPYHVD-FVHNTWRFGIDRVLAGVAMSDDSHAWIDATLPLDDVSSNRVELAGQFAEFV 535 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 RL VV L+GAR L WL ALA G+DLLT D WQ Q+QREFA LA AG RA Sbjct 536 ARLQRVVDSLTGARALRDWLAALAEGVDLLTRVADADLWQTGQLQREFASALADAGPRAD 595 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 +LRLPDVR LLD +LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRL Sbjct 596 TVLRLPDVRVLLDGRLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLG 655 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD LAR+PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQPRPPAVPLA Sbjct 656 VVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLA 715 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKR 778 ELLD LD TT+ VR+RI+V HPLQPFD +NV PGAL+ PF+FDP L AA+AA G+R Sbjct 716 ELLDTLDSTTAGRVRDRIVVAHPLQPFDIRNVVPGALVPDVPFSFDPTVLRAARAATGER 775 Query 779 CPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDA 838 FISG LP PPA DV LADL+ FFKDPVKGFFRAL++TLP DVD V+D++PV +D Sbjct 776 GEKPRFISGPLPPPPAGDVILADLVGFFKDPVKGFFRALEFTLPRDVDGVQDAMPVDLDG 835 Query 839 LAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAH 898 L EWTVG+RML D+LRG PDDA +EWRRGTLPPG+LG R A +IR++A LAAAA H Sbjct 836 LEEWTVGDRMLGDILRGWTPDDARQAEWRRGTLPPGQLGWRTATDIRDQAALLAAAAREH 895 Query 899 RDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEP 958 R A+DVDVDLG GRRL+GTV+PV+G R VSVTYSKL KH+L +WI L+ L A +P Sbjct 896 RGPDASAYDVDVDLGSGRRLTGTVSPVYGDRLVSVTYSKLDGKHLLESWIPLLALFAHDP 955 Query 959 GREWSALCIGRSKTRNHIAR--RLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 GR+WSA+CIGR K R R L P D VAVLRELV +YDAGRREP+PLP+KTS AW Sbjct 956 GRDWSAICIGRRK-RGTAPRVEGLGRPREDAVAVLRELVAVYDAGRREPIPLPVKTSYAW 1014 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE 1076 A AR G DP A+ W+ + + PAHVRAWG L+ RAGEE GE+ Sbjct 1015 AAARHCGDDPLREAQYRWKY------EHEEPAHVRAWGRNTRLAELMRPVRAGEECDGED 1068 Query 1077 TRLGALAARLWLPLLAAEGSV 1097 TRLGA AAR+WLP+L AEG+V Sbjct 1069 TRLGAYAARVWLPMLRAEGAV 1089 >gi|254776975|ref|ZP_05218491.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium avium subsp. avium ATCC 25291] Length=1096 Score = 1436 bits (3716), Expect = 0.0, Method: Compositional matrix adjust. Identities = 771/1098 (71%), Positives = 874/1098 (80%), Gaps = 10/1098 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M LHLHRAERTDLLADGLGALLA+P DPFA ELV+V ARGVERWLSQRLS VLG Sbjct 1 MPLHLHRAERTDLLADGLGALLANPPADPFALELVVVPARGVERWLSQRLSHVLGRARD- 59 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG+ FR+P SLIAEITGT +DDPWSP+ALAWPLL ID SLDEPWCRTLA+HLGH Sbjct 60 GDGVCAGVQFRSPGSLIAEITGTAEDDPWSPDALAWPLLEAIDCSLDEPWCRTLATHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F + AEAELRR RRY ARRLAGLFA YARQRP LL WLDGD G+L DL WQPPLWR Sbjct 120 FHSG-AEAELRRTRRYEAARRLAGLFAGYARQRPRLLVDWLDGDPGDLDEDLRWQPPLWR 178 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV V ADPPHVRH +TIARLR P+DLP RLSLFGHTRLACTDV+LLDALA HHDLHL Sbjct 179 ALVARVAADPPHVRHAETIARLRRAPSDLPQRLSLFGHTRLACTDVELLDALATHHDLHL 238 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LWRALAG +G++PRR DTS RA HPLL TLGRD+RELQR LPA TD Sbjct 239 WLPHPSDRLWRALAG---TNGVIPRRDDTSHRAVAHPLLATLGRDLRELQRGLPADPRTD 295 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E+L +PDTLLGWLQ+DIA NA RP GRSL+ DRSVQ+H CHGPARQ+DVLREVLLG Sbjct 296 EYLAGDARPDTLLGWLQSDIAANAIRPVGRSLAAGDRSVQIHNCHGPARQVDVLREVLLG 355 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTLQPRDI+VMCPDI++YAPLI+A FGLG+V HPAH+LRVRLADR+L QTNP Sbjct 356 LLADDPTLQPRDILVMCPDIESYAPLIMADFGLGDVVHGAHPAHQLRVRLADRSLIQTNP 415 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VAA+LL +A R AS++LNLAQ VRA+FGF DDDL+ IT WVR++NIRWG D Sbjct 416 LLGVAAQLLALAGGRVRASEVLNLAQTPAVRARFGFTDDDLEAITGWVRQANIRWGLDRQ 475 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR Y +D VHNTWRFG+DRIL GVAMS+DS AW+D LPLDDV SNRV+LAG+LAEFV Sbjct 476 HRRPYHVD-FVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVQLAGQLAEFV 534 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 RL HV+ L+GARPL WL A+A GI LLT D WQ Q+QREFA V A+AGSRA Sbjct 535 ARLQHVLDSLTGARPLTEWLTAVADGIALLTRVRDADEWQSGQLQREFAAVSAQAGSRAD 594 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 +LRLPDVRALL L+GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG+FPRL Sbjct 595 TVLRLPDVRALLTRHLSGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPRLG 654 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD L+R PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQPRPPAVPLA Sbjct 655 VVDGDDALSRCPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLA 714 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKR 778 ELLD LD TT+ PVR+RI+V HPLQPFD +NV P L+ PF+FDP L AA+AA G+ Sbjct 715 ELLDTLDITTAEPVRDRIVVRHPLQPFDIRNVIPDELVPGVPFSFDPTVLRAARAATGEH 774 Query 779 CPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDA 838 C P FIS LP PP ADV LADL+ FFKDPV+GFFRAL +TLP DVD V+D++PV +DA Sbjct 775 CEPPKFISAPLPPPPPADVILADLVGFFKDPVQGFFRALQFTLPHDVDGVQDAMPVDIDA 834 Query 839 LAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAH 898 L EWTVG+RMLRDMLRG+ P+DA +EWRRGTLPPG+LG RR EIR++A LA A H Sbjct 835 LQEWTVGDRMLRDMLRGMTPEDARQAEWRRGTLPPGQLGWRRVTEIRDQAARLAREAHQH 894 Query 899 R-DGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQE 957 R + G AHDVD+DLG GRRL+GTVTPV+G R V+VTYS+L +H+L +WI L+ LAA + Sbjct 895 RAEQPGGAHDVDIDLGRGRRLTGTVTPVYGNRLVAVTYSRLDGRHLLESWIPLLALAAHD 954 Query 958 PGREWSALCIGRSKTRNHI-ARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 GR+WSA+CIGR + I +RL P DPV +L ELV +YDAGRREP+PLPLKTS AW Sbjct 955 RGRDWSAVCIGRMRRGTGIRVQRLGSPDDDPVELLHELVSIYDAGRREPIPLPLKTSYAW 1014 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE 1076 A AR G DP AR W+++ PG+D APAHVRAWG AP + L+ R GEE GE+ Sbjct 1015 AAARYGGDDPVAEARYRWKSSDRYPGEDQAPAHVRAWGRGAPLDDLMQPVRPGEECDGED 1074 Query 1077 TRLGALAARLWLPLLAAE 1094 RLG AARLWLP+L AE Sbjct 1075 NRLGTYAARLWLPMLRAE 1092 >gi|254823034|ref|ZP_05228035.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium intracellulare ATCC 13950] Length=1100 Score = 1420 bits (3676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 761/1101 (70%), Positives = 872/1101 (80%), Gaps = 12/1101 (1%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGC--GP 58 M LHLHRAERTDLLADGLGALLADP DPFA ELV+V ARGVERWLSQRLS VLG G Sbjct 1 MPLHLHRAERTDLLADGLGALLADPPADPFAPELVVVPARGVERWLSQRLSHVLGRARGG 60 Query 59 GRADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHL 118 G + GVCAG++FR+P SLIAEI GT DDDPWSPEA+AWPLL ID SLDEPWCR LA+H+ Sbjct 61 GVSGGVCAGVSFRSPGSLIAEIAGTADDDPWSPEAMAWPLLEAIDHSLDEPWCRPLATHV 120 Query 119 GHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPL 178 GHF T AEAELRRGRRY VARRLAGLFASYARQRP LL WL GD G+L DL WQP L Sbjct 121 GHF-HTGAEAELRRGRRYEVARRLAGLFASYARQRPQLLIDWLGGDPGDLDEDLRWQPEL 179 Query 179 WRALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDL 238 WRALV+ V ADPPH+RH KT+ARL + P+DLPARLSLFGHTRL+ TD +LL ALA+HH+L Sbjct 180 WRALVSRVAADPPHIRHAKTLARLSEAPSDLPARLSLFGHTRLSRTDSELLAALAIHHEL 239 Query 239 HLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARA 298 HLWLPHPSD LWRALAG +GA +PRR+DTS RA HPLL TLGRD+RELQR LPA Sbjct 240 HLWLPHPSDRLWRALAGTRGA---IPRREDTSHRAVGHPLLATLGRDLRELQRGLPADAQ 296 Query 299 TDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVL 358 TDE+L +PDTLLGW+Q+DIA NA RP GR+L+D DRSVQ+H CHGPARQ+DVLREVL Sbjct 297 TDEYLPGEARPDTLLGWVQSDIAANAVRPQGRALTDDDRSVQIHNCHGPARQVDVLREVL 356 Query 359 LGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQT 418 LGLL DDPTL+PRDI+VMCPDI+TYAPLIVA FGLG+V HPAH+LRVRLADR+L QT Sbjct 357 LGLLADDPTLEPRDILVMCPDIETYAPLIVADFGLGDVVHGAHPAHQLRVRLADRSLVQT 416 Query 419 NPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFD 478 N LL+VA++LL +A R TA+++LNLAQAAPVRA+FGF DDDL+ IT WVR++NIRWG D Sbjct 417 NSLLAVASQLLGLAGGRVTATEVLNLAQAAPVRARFGFTDDDLEAITRWVRQANIRWGLD 476 Query 479 PTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAE 538 HRR Y +D VHNTWRFG+DRIL GVAMS+DS AW+D LPLDDV SNRV LAG+ AE Sbjct 477 QEHRRPYHVD-FVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVPLAGQFAE 535 Query 539 FVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSR 596 FV RLHHVV L+G R L WL LA I LT ++ WQ QVQREFA VLA+AGSR Sbjct 536 FVARLHHVVDSLTGTRTLTEWLATLAGAIASLTRVHESEEWQTGQVQREFAAVLAQAGSR 595 Query 597 AAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPR 656 +LRLPD+RALL LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG+FPR Sbjct 596 GGTVLRLPDIRALLTRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPR 655 Query 657 LSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVP 716 L DGDD LAR PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQPRPPAVP Sbjct 656 LGVVDGDDALARRPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVP 715 Query 717 LAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAG 776 LAELLDALD TT VR RI++ HPLQPFD +NV PG L+ PF+FDP L AA+AA+G Sbjct 716 LAELLDALDVTTPTKVRHRIVIEHPLQPFDIRNVIPGELVPKVPFSFDPTVLRAARAASG 775 Query 777 KRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQV 836 + F++ LP PPA DV LADL+ FFKDPVKGFFRAL++TLP+DVD V+D++PV + Sbjct 776 EHTEQPKFVAALLPPPPADDVNLADLVGFFKDPVKGFFRALEFTLPYDVDGVQDAMPVDI 835 Query 837 DALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAAL 896 + L EWTVG+RML D+LRG+ PDDA +EWRRG LPPG+LG R+ EIR++A LA AL Sbjct 836 NGLEEWTVGDRMLGDILRGMSPDDARQAEWRRGRLPPGQLGWRKVTEIRDQAAALALEAL 895 Query 897 AHRDGH--GQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLA 954 HR H A+DVDVDLG GRRL+GTV+PV+ VSVTYS+L KH+L +WI L+ LA Sbjct 896 RHRQDHRSAAAYDVDVDLGAGRRLTGTVSPVYDDALVSVTYSRLDGKHLLESWIPLLALA 955 Query 955 AQEPGREWSALCIGRSKTRNHIARRLFVPPP-DPVAVLRELVLLYDAGRREPLPLPLKTS 1013 A +P R+WSA+CIGR + I PP DPV VLRELV +YDAGRREP+PLP+KTS Sbjct 956 AHDPVRDWSAVCIGRMRRGRSIRVEGLGPPDGDPVEVLRELVTIYDAGRREPIPLPIKTS 1015 Query 1014 CAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVA 1073 AWA AR G DP AR W+T+ PG+D APAHVRAWG AP + L+ R GEE Sbjct 1016 YAWAAARHGGDDPAAEARRRWKTSDRFPGEDQAPAHVRAWGRGAPLDDLMQPVRPGEECD 1075 Query 1074 GEETRLGALAARLWLPLLAAE 1094 GE+ RLGA AARLWLP+L AE Sbjct 1076 GEDNRLGAYAARLWLPMLRAE 1096 >gi|342858878|ref|ZP_08715532.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium colombiense CECT 3035] gi|342133119|gb|EGT86322.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium colombiense CECT 3035] Length=1100 Score = 1400 bits (3624), Expect = 0.0, Method: Compositional matrix adjust. Identities = 747/1103 (68%), Positives = 860/1103 (78%), Gaps = 16/1103 (1%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M LHLHRAERTDLLADGLGALLA+P DPFA ELV+V ARGVERWLSQRLS VLG G Sbjct 1 MPLHLHRAERTDLLADGLGALLANPPADPFATELVVVPARGVERWLSQRLSHVLGARAG- 59 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG+AFR P SLIAEITGT D+DPWSP+A+AWPLL ID SLDEPWCR LA H+GH Sbjct 60 -DGVCAGVAFRTPGSLIAEITGTADNDPWSPDAMAWPLLEAIDCSLDEPWCRALAMHVGH 118 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F T AE ELR+GRRY VARRLAGLF SYARQRP LL W +G+ G+L DL WQP LWR Sbjct 119 F-HTGAEGELRQGRRYEVARRLAGLFDSYARQRPQLLVDWGNGEPGDLDEDLRWQPELWR 177 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV V ADPPHVRH +TIARLR+ P +LP+RLSLFGHTRL TD++LL+A+A HHDLHL Sbjct 178 ALVARVAADPPHVRHARTIARLREAPTELPSRLSLFGHTRLTRTDIELLEAVATHHDLHL 237 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LWRALAG +GA +PRR D S RA HPLL TLGRD+RELQR LPA ATD Sbjct 238 WLPHPSDALWRALAGARGA---VPRRDDVSHRAVSHPLLATLGRDLRELQRGLPADPATD 294 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 ++L +PDTLLGWLQ+DIA NA RP R+++ DRSVQ+H CHGPARQ+DVLREVLLG Sbjct 295 DYLAGAARPDTLLGWLQSDIAANAVRPLDRTMAAGDRSVQIHNCHGPARQVDVLREVLLG 354 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTL+PRDI+VMCPDI+TYAPLI+A FGLG+V HPAH+LRVRLADR+ QTNP Sbjct 355 LLADDPTLEPRDILVMCPDIETYAPLIMADFGLGDVVHGAHPAHQLRVRLADRSPIQTNP 414 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VAA+LLT+A R TAS++LNLAQA PVRA+FGF DDDL+ IT WVR++NIRWG D Sbjct 415 LLGVAAQLLTLAAGRVTASEVLNLAQAPPVRAQFGFTDDDLEAITRWVRQANIRWGLDQR 474 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR Y +D VHNTWRFG+DRIL GVAMS+DS AW+D LPLDDV SNRV+LAG+ AEFV Sbjct 475 HRRPYHVD-FVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVQLAGQFAEFV 533 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 RL H + LSG RPL WL A+ G+ LLT D WQ Q+ REFA L +AG R Sbjct 534 ARLQHTLDALSGTRPLSEWLAAITEGVALLTRVRDADEWQTGQMNREFAQTLGQAGPRGD 593 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 LRLPD+RALL +LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG+FPRL Sbjct 594 IALRLPDIRALLTRRLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPRLG 653 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD LAR PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQPRPPAVPLA Sbjct 654 IVDGDDALARCPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLA 713 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKR 778 ELLD LD TT+ VR+RI+V HPLQPFD +NV PG L+ PF+FDP L AA+AAAG Sbjct 714 ELLDTLDVTTATKVRDRIVVEHPLQPFDIRNVIPGGLVPDVPFSFDPTVLRAARAAAGDH 773 Query 779 CPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDA 838 FIS LPAPPA DV LADL+ FFKDPVKGFFRAL++TLP+DVD V+D++PV +D Sbjct 774 AEQPKFISAPLPAPPAGDVILADLVGFFKDPVKGFFRALEFTLPYDVDGVQDAMPVDIDG 833 Query 839 LAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAH 898 L EWTVG+RML D+LRG+ PDDA +EWRRGTLPPG+LG R+ EIR++A LA+ AL H Sbjct 834 LEEWTVGDRMLGDILRGMTPDDARQAEWRRGTLPPGQLGWRKVTEIRDQAALLASEALRH 893 Query 899 ----RDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLA 954 R A+DVDVDLG GRRL+GTV+PV+ R VSVTYS+L KH+L +WI L+ L Sbjct 894 MHRDRPADASAYDVDVDLGGGRRLTGTVSPVYDDRLVSVTYSRLDGKHLLESWIPLLALV 953 Query 955 AQEPGREWSALCIGRSKTRNHIARRLFVPPPD---PVAVLRELVLLYDAGRREPLPLPLK 1011 A +PGR+W+A+C+GR + P D V VLRELV +YDAGRREP+PLP+K Sbjct 954 AHDPGRDWAAVCVGRMRRGVSTRTEGLGRPGDGEQAVGVLRELVAIYDAGRREPIPLPIK 1013 Query 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071 TS AWA AR G+DP AR W+++ PG+D APAH RAWG AP E L+ R GEE Sbjct 1014 TSYAWAAARYGGEDPVAEARYRWKSSDRFPGEDQAPAHARAWGKGAPLEELMAPVRPGEE 1073 Query 1072 VAGEETRLGALAARLWLPLLAAE 1094 GE+ RLGA AAR+WLP+L AE Sbjct 1074 CDGEDNRLGAYAARVWLPMLRAE 1096 >gi|126433516|ref|YP_001069207.1| DNA helicase/exodeoxyribonuclease V subunit gamma [Mycobacterium sp. JLS] gi|126233316|gb|ABN96716.1| DNA helicase/exodeoxyribonuclease V, gamma subunit [Mycobacterium sp. JLS] Length=1080 Score = 1382 bits (3576), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/1097 (68%), Positives = 858/1097 (79%), Gaps = 22/1097 (2%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M HLHRAERTDLLADGLGALL+ P DPFA+ELVLV A+GVERWLSQRLS VLG G G Sbjct 1 MPFHLHRAERTDLLADGLGALLSTPLADPFAEELVLVPAKGVERWLSQRLSHVLGRGSG- 59 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAGI FRNP+SLIA+ITGT DDDPW+P++L WPLL VID +LD+PWC TLA+HLGH Sbjct 60 DDGVCAGITFRNPRSLIADITGTRDDDPWAPDSLVWPLLEVIDDNLDQPWCTTLATHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F + E ELR+ RRY+VARRLAGLFASYARQRPGLL WL GD +L DL WQP LWR Sbjct 120 FEHGE-EQELRQSRRYAVARRLAGLFASYARQRPGLLVDWLAGDPADLDDDLHWQPHLWR 178 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 LV V ADPPH+RH KT+ARL + P+DLP RLSLFGHTRL T+V+LLDALA HHDLHL Sbjct 179 HLVDRVPADPPHIRHAKTVARLHESPSDLPERLSLFGHTRLPSTEVELLDALATHHDLHL 238 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD+LW L +GA + RR+D + R HPLL TLGRD+RELQR+LP TD Sbjct 239 WLPHPSDDLWTTLEPHRGA---VRRREDNTHREVGHPLLATLGRDLRELQRSLPDDAQTD 295 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E+LG PDTLLGWLQ+DIA NA RP GR L D DRSVQVH+CHG ARQIDVLREVLLG Sbjct 296 EYLGTADHPDTLLGWLQSDIAANAVRPDGRRLHDHDRSVQVHSCHGAARQIDVLREVLLG 355 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTL+PRDI+VMCPDI+ YAPLIVAGFGLG+V HPAHRLRV+LADRALTQTNP Sbjct 356 LLVDDPTLEPRDILVMCPDIEHYAPLIVAGFGLGDVIHGAHPAHRLRVKLADRALTQTNP 415 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VAA+LL +A RATA+++LNLA+A +RA+F F+DDDLD I WVRE+NIRWGFD Sbjct 416 LLGVAAQLLALAGGRATATEVLNLAEAPSIRARFTFSDDDLDAIGDWVREANIRWGFDRE 475 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HR YG+D V NTWRFGLDR+L GVAMS+DS AWLDT LPLDDVGS+RVELAGRLAE+V Sbjct 476 HRHPYGVD-FVQNTWRFGLDRVLAGVAMSDDSHAWLDTTLPLDDVGSDRVELAGRLAEYV 534 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTAC--NDGWQRAQVQREFADVLARAGSRAA 598 +RL H V LSG RPL WLDAL TGID LT+ +D WQ +Q++REFADVL +AG R Sbjct 535 DRLQHCVENLSGTRPLHEWLDALRTGIDQLTSVPDDDTWQTSQLEREFADVLTQAGPRKD 594 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 LLRLPDV+ALLD LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG FPRL Sbjct 595 TLLRLPDVKALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGAFPRLG 654 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD LAR+PMTGERDIRSEDRQLLLDAIGAAT+ LV+TYTGA+E +GQ +PPAVPL Sbjct 655 VVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATERLVVTYTGANEYSGQRKPPAVPLV 714 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGAL-LGAKPFTFDPAALAAAQAAAGK 777 ELLDALD TT APVRE+ILV HPLQPFD +NVTPGAL + PFTFD AL AA A+G Sbjct 715 ELLDALDVTTEAPVREQILVEHPLQPFDVRNVTPGALGVPGTPFTFDSTALTAATVASGD 774 Query 778 RCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVD 837 R ++ LPAPP DV L DL+ FFKDPV+GFFRALD+TLPWDVD VED++PV++D Sbjct 775 RAERPGLLTHPLPAPPEDDVALDDLIGFFKDPVRGFFRALDFTLPWDVDAVEDAMPVEID 834 Query 838 ALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALA 897 ALAEW VGERML DMLRGL+P+ A +EWRRG+LPPGRLG R+A+E+R++A LA AA Sbjct 835 ALAEWQVGERMLDDMLRGLNPEQAQQAEWRRGSLPPGRLGWRKAQELRDQAAALATAAHR 894 Query 898 HRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQE 957 HR +A+DVD+ LG GRR++GTV V+G RTV+VTYSKL +H+L +WI L L+AQ Sbjct 895 HRRQPPRAYDVDIHLGGGRRVTGTVPKVYGDRTVTVTYSKLDGRHLLASWIQLAALSAQM 954 Query 958 PGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWA 1017 PG +W+A+CIGR K R+ P D VL++LV +YDAGRREP+PLP KTS AWA Sbjct 955 PGTDWAAVCIGRPKRGTTPRERMLGAPGDAAGVLQDLVNMYDAGRREPIPLPPKTSYAWA 1014 Query 1018 QARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEET 1077 +AR D AR W+++R+ PG+D PA+VR WG AP + LL AG Sbjct 1015 EARHSRGDAEREARYRWKSDRY-PGEDAEPANVRVWGAHAPLDTLLA---AG-------- 1062 Query 1078 RLGALAARLWLPLLAAE 1094 + A RLWLP+L AE Sbjct 1063 -MDGYAGRLWLPMLEAE 1078 >gi|108797876|ref|YP_638073.1| DNA helicase/exodeoxyribonuclease V subunit gamma [Mycobacterium sp. MCS] gi|119866970|ref|YP_936922.1| DNA helicase/exodeoxyribonuclease V subunit gamma [Mycobacterium sp. KMS] gi|108768295|gb|ABG07017.1| DNA helicase/exodeoxyribonuclease V, gamma subunit [Mycobacterium sp. MCS] gi|119693059|gb|ABL90132.1| DNA helicase/exodeoxyribonuclease V, gamma subunit [Mycobacterium sp. KMS] Length=1082 Score = 1373 bits (3555), Expect = 0.0, Method: Compositional matrix adjust. Identities = 736/1097 (68%), Positives = 855/1097 (78%), Gaps = 22/1097 (2%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M HLHRAERTDLLADGLGALL+ P DPFA+ELVLV A+GVERWLSQRLS VLG G G Sbjct 1 MPFHLHRAERTDLLADGLGALLSTPLADPFAEELVLVPAKGVERWLSQRLSHVLGRGSG- 59 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAGI FRNP+SLIA+ITGT DDDPW+P++L WPLL VID +LD+PWC TLA+HLGH Sbjct 60 DDGVCAGITFRNPRSLIADITGTRDDDPWAPDSLVWPLLEVIDDNLDQPWCTTLATHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F E ELR+ RRY+VARRLAGLFASYARQRPGLL WL G+ +L DL WQP LWR Sbjct 120 FEHG-QEQELRQSRRYAVARRLAGLFASYARQRPGLLVDWLAGNPADLDDDLHWQPHLWR 178 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 LV V ADPPH+RH KT+ARL + P++LP R+SLFGHTRL T+V+LLDALA HHDLHL Sbjct 179 HLVERVPADPPHIRHAKTVARLHESPSNLPERMSLFGHTRLPSTEVELLDALATHHDLHL 238 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD+LW L +GA + RR+D + R HPLL TLGRD+RELQR+LP TD Sbjct 239 WLPHPSDDLWTTLEPHRGA---VRRREDNTHREVGHPLLATLGRDLRELQRSLPDDSQTD 295 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E+LG PDTLLGWLQ+DIA NA RP GR L D DRSVQVH+CHG ARQIDVLREVLLG Sbjct 296 EYLGTADHPDTLLGWLQSDIAANAVRPDGRRLHDHDRSVQVHSCHGAARQIDVLREVLLG 355 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTL+PRDI+VMCPDI+ YA LIVAGFGLG+V HPAHRLRV+LADRALTQTNP Sbjct 356 LLVDDPTLEPRDILVMCPDIEHYAALIVAGFGLGDVIHGAHPAHRLRVKLADRALTQTNP 415 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VA +LL +A RATA+++LNLA+A +RA+F F+DDDLD I WVRE+NIRWGFD Sbjct 416 LLGVAGQLLALAGGRATATEVLNLAEAPSIRARFTFSDDDLDAIGDWVREANIRWGFDRE 475 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HR YG+D V NTWRFGLDR+L GVAMS+DS AWLDT LPLDDVGS+RVELAGRLAE+V Sbjct 476 HRHPYGVD-FVQNTWRFGLDRVLAGVAMSDDSHAWLDTTLPLDDVGSDRVELAGRLAEYV 534 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTAC--NDGWQRAQVQREFADVLARAGSRAA 598 +RL H V LSG +PL WL+AL TGID LTA +D WQ +Q++REFADVL +AGSR Sbjct 535 DRLQHCVENLSGTKPLHEWLEALRTGIDQLTAVPDDDTWQTSQLEREFADVLTQAGSRKD 594 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 LLRLPDV+ALLD LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG FPRL Sbjct 595 TLLRLPDVKALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGAFPRLG 654 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD LAR+PMTGERDIRSEDRQLLLDAIGAAT+ LV+TYTGA+E +GQ +PPAVPL Sbjct 655 VVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATERLVVTYTGANEYSGQRKPPAVPLV 714 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGAL-LGAKPFTFDPAALAAAQAAAGK 777 ELLDALD TT APVR++ILV HPLQPFD +NVTPGAL + PFTFD AL AA A+G Sbjct 715 ELLDALDVTTEAPVRKQILVEHPLQPFDVRNVTPGALGVPGTPFTFDSTALTAATVASGD 774 Query 778 RCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVD 837 R ++ LPAPP DV L DL+ FFKDPVKGFFRALD+TLPWDVD V+D++PV++D Sbjct 775 RAERPGLLTHPLPAPPEDDVALDDLIGFFKDPVKGFFRALDFTLPWDVDAVQDAMPVEID 834 Query 838 ALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALA 897 ALAEW VGERML DMLRGL+P+ A +EWRRG+LPPGRLG R+A+E+R++A LA AA Sbjct 835 ALAEWQVGERMLDDMLRGLNPEQAQQAEWRRGSLPPGRLGWRKAQELRDQAAALATAAHR 894 Query 898 HRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQE 957 HR +A+DVD+ LG GRR++GTV V+G RTV+VTYSKL +H+L +WI L L AQ Sbjct 895 HRRQPARAYDVDIHLGGGRRVTGTVPKVYGDRTVTVTYSKLDGRHLLASWIQLAALTAQL 954 Query 958 PGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWA 1017 PG +W+A+CIGR K R+ P D VLR+LV +YDAGRREP+PLP KTS AWA Sbjct 955 PGTDWAAVCIGRPKRGATPRERMLGAPGDATGVLRDLVNMYDAGRREPIPLPPKTSYAWA 1014 Query 1018 QARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEET 1077 +AR D +R W+++R+ PG+D PA+VR WG AP + LL AG Sbjct 1015 EARHSRGDAERESRYRWKSDRY-PGEDAEPANVRVWGAHAPLDTLLA---AG-------- 1062 Query 1078 RLGALAARLWLPLLAAE 1094 + A RLWLP+L AE Sbjct 1063 -MDGYAGRLWLPMLEAE 1078 >gi|118616502|ref|YP_904834.1| exodeoxyribonuclease V (gamma chain), RecC [Mycobacterium ulcerans Agy99] gi|118568612|gb|ABL03363.1| exodeoxyribonuclease V (gamma chain), RecC [Mycobacterium ulcerans Agy99] Length=1099 Score = 1367 bits (3537), Expect = 0.0, Method: Compositional matrix adjust. Identities = 748/1102 (68%), Positives = 856/1102 (78%), Gaps = 15/1102 (1%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M HLHRAERTDLLADGLGALLA P DPFA+ELVLV ARGVERWLSQRLS +LG PG Sbjct 1 MPFHLHRAERTDLLADGLGALLAQPLADPFAEELVLVPARGVERWLSQRLSHLLGHAPGG 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG++FRNP+SLIAEITGT DDPWS EA+ WPLL VID SL+EPWC TLA HLGH Sbjct 61 GDGVCAGVSFRNPRSLIAEITGTAADDPWSAEAMTWPLLEVIDGSLEEPWCATLARHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F EAELRRGRRYSVARRLAGLFASYARQRP +L+ WLDG G+L DL+WQP LW Sbjct 121 F-DVGPEAELRRGRRYSVARRLAGLFASYARQRPRVLSDWLDGGRGDLDPDLSWQPELWC 179 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV VGADPPH+RH+KT+ LR PA LP RLSLFGHTR+A TD++LL ALA HH+LHL Sbjct 180 ALVAVVGADPPHLRHEKTLTALRARPAGLPPRLSLFGHTRMAVTDIELLGALATHHELHL 239 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPS LWR+LA G ++PRR D S R HPLL TLGRD+RELQR LPA ATD Sbjct 240 WLPHPSAALWRSLADLHG---VVPRRADASHRRVVHPLLATLGRDLRELQRGLPADPATD 296 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E LGATT+PDTLLGWLQ+D+A N RP R+L DRS+QVH+CHGPARQIDVLREVLLG Sbjct 297 EALGATTRPDTLLGWLQSDLAANQVRPENRTLVAGDRSIQVHSCHGPARQIDVLREVLLG 356 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTL+PRDI+VMCPDI+TYAPLIVA FGLG+V HPAHRLRVRLADR+L QTNP Sbjct 357 LLADDPTLEPRDILVMCPDIETYAPLIVADFGLGDVMHGVHPAHRLRVRLADRSLLQTNP 416 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VA++LL +A +R TAS++LNLAQAAPVRA+FGFADD L+ IT WVR+SNIRWGFD Sbjct 417 LLGVASQLLMLAGSRVTASEVLNLAQAAPVRARFGFADDHLEDITRWVRQSNIRWGFDQE 476 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HR+ YG+D VHNTWRFG+DR+L GVAMSE S AW+D LPLDDVGSNRVELAGR AE++ Sbjct 477 HRKPYGVD-FVHNTWRFGIDRVLAGVAMSEASHAWIDATLPLDDVGSNRVELAGRFAEYI 535 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 +RL VV L+G RPL WL AL GI LLT ++G WQ Q++REFA+V AG Sbjct 536 DRLRQVVDSLTGTRPLREWLAALTDGIALLTRVDEGEAWQSDQMRREFAEVSRTAGRWVE 595 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 +LR+PD+RALL LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPR Sbjct 596 TMLRVPDIRALLQRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRQG 655 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDDVLAR PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQ +PPAVPLA Sbjct 656 VVDGDDVLARSPMTGERDIRSEDRQLLLDAIGAATENLVITYTGANEYSGQRKPPAVPLA 715 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKR 778 ELL LD TT+ VR R++V HPLQPFD +NVT GAL+ PF+FDP L AA+AAAG+R Sbjct 716 ELLGTLDMTTTEQVRGRVVVEHPLQPFDVRNVTRGALMPGVPFSFDPTVLRAARAAAGER 775 Query 779 CPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDA 838 FI L PPA DV LADL+ FFKDPVKGFFRALDYTLPWDVD VED++PV ++A Sbjct 776 AQQPRFIGAPLAPPPADDVALADLVAFFKDPVKGFFRALDYTLPWDVDGVEDAMPVDINA 835 Query 839 LAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAH 898 L EWTVG+RML D+L G+ PD+A +EWRRGTLPPG+LG R+ EIR++A LAAAA+ H Sbjct 836 LEEWTVGDRMLADILSGMAPDEARQAEWRRGTLPPGQLGWRKVTEIRDQAALLAAAAMRH 895 Query 899 RDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEP 958 R A+DVD+DLG RRL+GTV VFG R VSVTYSKL KH+L +WI L+ L A Sbjct 896 RRDDAAAYDVDIDLG-SRRLTGTVAQVFGDRLVSVTYSKLDGKHLLESWIPLLALFAHAG 954 Query 959 GREWSALCIGRSKTRNHIARR--LFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 +WSA+CIGR K R + R+ L P PV +LR+LV +YDAGRREP+PLP+KTS AW Sbjct 955 AHDWSAVCIGRQK-RGTVPRQAGLGRPRGQPVELLRDLVAIYDAGRREPIPLPIKTSYAW 1013 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVA--- 1073 A AR G DP A W+++ P +D APAHVR WG A L+ A E A Sbjct 1014 AAARHCGDDPVREASFRWKSSDRYPAEDQAPAHVRTWGRNARLTDLMQPVHAESERAACP 1073 Query 1074 -GEETRLGALAARLWLPLLAAE 1094 GE+ RLGA AARLWLP+L AE Sbjct 1074 NGEDNRLGAFAARLWLPMLRAE 1095 >gi|289749132|ref|ZP_06508510.1| exonuclease subunit V gamma recC [Mycobacterium tuberculosis T92] gi|289689719|gb|EFD57148.1| exonuclease subunit V gamma recC [Mycobacterium tuberculosis T92] Length=734 Score = 1366 bits (3536), Expect = 0.0, Method: Compositional matrix adjust. Identities = 699/699 (100%), Positives = 699/699 (100%), Gaps = 0/699 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV Sbjct 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 Query 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP Sbjct 601 LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHP 660 Query 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVIT 699 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVIT Sbjct 661 DGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVIT 699 >gi|183980979|ref|YP_001849270.1| exodeoxyribonuclease V (gamma chain), RecC [Mycobacterium marinum M] gi|183174305|gb|ACC39415.1| exodeoxyribonuclease V (gamma chain), RecC [Mycobacterium marinum M] Length=1099 Score = 1365 bits (3532), Expect = 0.0, Method: Compositional matrix adjust. Identities = 751/1102 (69%), Positives = 858/1102 (78%), Gaps = 15/1102 (1%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M LHLHRAERTDLLADGLGALLA P DPFA+ELVLV ARGVERWLSQRLS +LG PG Sbjct 1 MPLHLHRAERTDLLADGLGALLAQPLADPFAEELVLVPARGVERWLSQRLSHLLGHAPGG 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG++FRNP+SLIAEITGT DDPWS EA+ WPLL VID SL++PWC TLA HLGH Sbjct 61 GDGVCAGVSFRNPRSLIAEITGTAADDPWSAEAMTWPLLEVIDGSLEQPWCATLARHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F EAELRRGRRYSVARRLAGLFASYARQRP +L+ WLDG G+L DL+WQP LW Sbjct 121 F-DVGPEAELRRGRRYSVARRLAGLFASYARQRPRVLSDWLDGGRGDLDPDLSWQPELWC 179 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV VGADPPH+RH+KT+ LR PA LP RLSLFGHTR+A TD++LL A+A HH+LHL Sbjct 180 ALVAVVGADPPHLRHEKTLTALRARPAGLPPRLSLFGHTRMAVTDIELLGAVATHHELHL 239 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPS LWR+LA G ++PRR D S R HPLL TLGRD+RELQR LPA ATD Sbjct 240 WLPHPSAALWRSLADLHG---VVPRRADASHRRVVHPLLATLGRDLRELQRGLPADPATD 296 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E LGATT+PDTLLGWLQ+D+A N RP R+L DRS+QVH+CHGPARQIDVLREVLLG Sbjct 297 EALGATTRPDTLLGWLQSDLAANQVRPENRTLVAGDRSIQVHSCHGPARQIDVLREVLLG 356 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTL+PRDI+VMCPDI+TYAPLIVA FGLG+V HPAHRLRVRLADR+L QTNP Sbjct 357 LLADDPTLEPRDILVMCPDIETYAPLIVADFGLGDVMHGVHPAHRLRVRLADRSLLQTNP 416 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VA++LL +A +R TAS++LNLAQAAPVRA+FGFADD L+ IT WVR+SNIRWGFD Sbjct 417 LLGVASQLLMLAGSRVTASEVLNLAQAAPVRARFGFADDHLEDITRWVRQSNIRWGFDQE 476 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HR+ YG+D VHNTWRFG+DR+L GVAMSE S AW+D LPLDDVGSNRVELAGR AE++ Sbjct 477 HRKPYGVD-FVHNTWRFGIDRVLAGVAMSEASHAWIDATLPLDDVGSNRVELAGRFAEYI 535 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 +RL VV L+G RPL WL AL GI LLT ++G WQ Q+QREFA+V AG Sbjct 536 DRLRQVVDSLTGTRPLREWLAALTDGIALLTRVDEGDAWQSDQMQREFAEVSRTAGRWVE 595 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 +LRLPD+RALL LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPR Sbjct 596 TMLRLPDIRALLQRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRQG 655 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDDVLAR PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQ +PPAVPLA Sbjct 656 VVDGDDVLARSPMTGERDIRSEDRQLLLDAIGAATENLVITYTGANEYSGQRKPPAVPLA 715 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKR 778 ELLD LD TT+ VR R++V HPLQPFD +NVT GAL+ PF+FDP L AA+AAAG+R Sbjct 716 ELLDTLDMTTTEQVRGRVVVEHPLQPFDVRNVTCGALMPGVPFSFDPTVLRAARAAAGER 775 Query 779 CPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDA 838 FI L PPA DV LADL+ FFKDPVKGFFRALDYTLPWDVD VED++PV ++A Sbjct 776 AQQPRFIGAPLAPPPADDVALADLVAFFKDPVKGFFRALDYTLPWDVDGVEDAMPVDINA 835 Query 839 LAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAH 898 L EWTVG+RML D+L G+ PD+A +EWRRGTLPPG+LG R+ EIR++A LAAAAL H Sbjct 836 LEEWTVGDRMLADILSGMAPDEARQAEWRRGTLPPGQLGWRKVTEIRDQAALLAAAALRH 895 Query 899 RDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEP 958 R A+DVD+DLG RRL+GTV VFG R VSVTYSKL KH+L +WI L+ L A Sbjct 896 RRADAAAYDVDIDLG-SRRLTGTVAQVFGDRLVSVTYSKLDGKHLLESWIPLLALFAHAG 954 Query 959 GREWSALCIGRSKTRNHIARR--LFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 +WSA+CIGR K R + R+ L P PV +LR+LV +YDAGRREP+PLP+KTS AW Sbjct 955 AHDWSAVCIGRQK-RGTVPRQAGLGRPREQPVELLRDLVAIYDAGRREPIPLPIKTSYAW 1013 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVA--- 1073 AR G DP A W+++ P +D APAHVR WG A L+ RA E A Sbjct 1014 GAARHCGDDPVREASFRWKSSDRYPAEDQAPAHVRTWGRNARLTDLMQPVRAESERAACP 1073 Query 1074 -GEETRLGALAARLWLPLLAAE 1094 GE+ RLGA AARLWLP+L AE Sbjct 1074 NGEDNRLGAFAARLWLPMLRAE 1095 >gi|169627504|ref|YP_001701153.1| exodeoxyribonuclease V subunit gamma [Mycobacterium abscessus ATCC 19977] gi|169239471|emb|CAM60499.1| Exodeoxyribonuclease V, gamma subunit (RecC) [Mycobacterium abscessus] Length=1077 Score = 1360 bits (3520), Expect = 0.0, Method: Compositional matrix adjust. Identities = 727/1095 (67%), Positives = 843/1095 (77%), Gaps = 22/1095 (2%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHL RAERTD+LADGL LLA P PDPFA+ELVLV A+G+ERWLSQRLS LG Sbjct 1 MALHLRRAERTDMLADGLARLLAVPAPDPFAEELVLVPAKGIERWLSQRLSDRLG----- 55 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 VCAG+ FR+P+SLIAEITGT+D+DPWSP+AL WPLL VID +L + W LASHLG Sbjct 56 ---VCAGVRFRSPRSLIAEITGTVDNDPWSPDALVWPLLTVIDENLHQSWAVPLASHLGA 112 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F + E ELR+GRRY+VARRLAGLFASYARQRP LL +WLDGD E DLAWQPPLWR Sbjct 113 FEAGE-ERELRQGRRYAVARRLAGLFASYARQRPELLVSWLDGDPAE--PDLAWQPPLWR 169 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV V A PPHVRHD+ ARLR+ P+DLP R+SLFGHTRL TD++LLDALA HHDL+L Sbjct 170 ALVARVDAVPPHVRHDRVRARLREAPSDLPPRISLFGHTRLPVTDIELLDALATHHDLYL 229 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LW+ LA G +PRR+D + R+ +HPLL TLGRDVRELQRALP +D Sbjct 230 WLPHPSDALWQTLASDHGP---VPRREDIAHRSVRHPLLATLGRDVRELQRALPEP-TSD 285 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E+L TT D+LLGWLQ+D+A + RP GR+L+ D +VQVH+CHGPARQIDVLREVLLG Sbjct 286 EYLSGTTFSDSLLGWLQSDLAADEVRPQGRALAAHDHTVQVHSCHGPARQIDVLREVLLG 345 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTL+PRDI+VMCPDI+TYAPLI A FGLGE HPAH+LRVRLADRAL QTNP Sbjct 346 LLADDPTLEPRDILVMCPDIETYAPLISARFGLGESVPGAHPAHQLRVRLADRALVQTNP 405 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL+VA ++L++A RATAS++LNLA+++PVR +FGF DDDLD IT WVRE+NIRWGFDP Sbjct 406 LLTVAGQILSLASGRATASEVLNLAESSPVRMRFGFTDDDLDAITAWVREANIRWGFDPE 465 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HR YG+D +HNTWRFG+DR+L GVA+SED+ AWL LPLDDV SNRVELAGR AEFV Sbjct 466 HRAPYGVD-FLHNTWRFGIDRVLAGVALSEDAHAWLGATLPLDDVSSNRVELAGRFAEFV 524 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPL 600 +LH V LSG RPL WL L+TGID L ++ W RAQ+ REFA++ A P+ Sbjct 525 SQLHTTVTALSGTRPLAEWLTILSTGIDALATDSEDWPRAQMLREFAEI----QDAAVPV 580 Query 601 -LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSH 659 LRL D+RALLD LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRL Sbjct 581 SLRLSDIRALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGA 640 Query 660 PDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAE 719 DGDD LAR+PMTGERDIRSEDRQLLLDAIGAAT+TLV+TYTGA+E +GQ RPPAVPLAE Sbjct 641 VDGDDALARDPMTGERDIRSEDRQLLLDAIGAATETLVLTYTGANEYSGQARPPAVPLAE 700 Query 720 LLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRC 779 LLD LD TTS PVR+RI +THPLQPFD +NVTPG+++ PFTFD AL AA+AAAG R Sbjct 701 LLDTLDITTSQPVRDRIHITHPLQPFDIRNVTPGSVIPGHPFTFDSTALIAARAAAGARA 760 Query 780 PPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDAL 839 FI G LPA DV L DL FF P+KGFFRALDYTLPWDVD V D +PV++DAL Sbjct 761 ERPPFICGPLPALDVTDVALTDLAAFFNHPIKGFFRALDYTLPWDVDGVSDDMPVEIDAL 820 Query 840 AEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHR 899 EWTVG+R+L DMLRG+ P DA +EWRRGTLPPG+LG RR E+R R LAA ++ Sbjct 821 EEWTVGDRLLADMLRGMTPADAQQAEWRRGTLPPGQLGWRRVSELRERCAALAAETRGYQ 880 Query 900 DGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPG 959 +A D+D+DLGDGRRL+GTV+PVFG R VSVTYS+L KH+L +WI LV L+A + Sbjct 881 TDDSRAFDIDIDLGDGRRLAGTVSPVFGERLVSVTYSRLDAKHLLQSWIPLVALSAHDHQ 940 Query 960 REWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAWAQA 1019 R+WSA+CIGR++ R P DP+ VLR LV +YDAGRREPLPLPLKTS AWAQA Sbjct 941 RDWSAVCIGRARRGPQPLVRSLGRPMDPLGVLRGLVAIYDAGRREPLPLPLKTSYAWAQA 1000 Query 1020 RRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRL 1079 RRD DP A W++ F PG+D PA RA+G L+ R GEE GE RL Sbjct 1001 RRDRDDPELQAGYRWRSGNF-PGEDADPAVERAFGQGVWLRHLMQPLRPGEETEGETNRL 1059 Query 1080 GALAARLWLPLLAAE 1094 GA +ARLWLPLL AE Sbjct 1060 GAYSARLWLPLLRAE 1074 >gi|120402222|ref|YP_952051.1| exodeoxyribonuclease V subunit gamma [Mycobacterium vanbaalenii PYR-1] gi|119955040|gb|ABM12045.1| DNA helicase/exodeoxyribonuclease V, gamma subunit [Mycobacterium vanbaalenii PYR-1] Length=1084 Score = 1347 bits (3486), Expect = 0.0, Method: Compositional matrix adjust. Identities = 726/1099 (67%), Positives = 842/1099 (77%), Gaps = 24/1099 (2%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRA+RTDLLADGLGA+LADP DPFA++LVLV+ARG ERWLSQRLS +LG G G+ Sbjct 1 MALHLHRADRTDLLADGLGAMLADPPADPFAEDLVLVSARGTERWLSQRLSHILGRGSGQ 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DG+CAG+ FR+P+SL+AE+TGT +DDPWSP+A+ WPLL VID + EPWC TLA+HLGH Sbjct 61 -DGICAGVTFRHPRSLMAELTGTDEDDPWSPDAMVWPLLDVIDGCITEPWCATLATHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FA + E LR+GRRY+VARRLAGLF SYARQRP LL W+DG G L DL WQP L+R Sbjct 120 FADGE-EKVLRQGRRYAVARRLAGLFDSYARQRPQLLIDWIDGRTGALDEDLRWQPELYR 178 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 AL+ V +PPH+RH +T+ARLR+ P++LP RLS+FGHTRL T+++LL AL+ HHDLHL Sbjct 179 ALLAHVDTEPPHIRHAETVARLRESPSELPQRLSMFGHTRLPATEIELLAALSTHHDLHL 238 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD+LW +L G GA PRR DTS R HPLL TLGRD+RELQR LPA TD Sbjct 239 WLPHPSDKLWTSLRGVHGA---APRRTDTSHRDVDHPLLATLGRDLRELQRVLPADAQTD 295 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E LG +PDTLLGWLQ+D+ +A RP GRS + DRSVQVH+CHG ARQIDVLREVLLG Sbjct 296 ESLGPADRPDTLLGWLQSDLGADAVRPQGRSCAPGDRSVQVHSCHGAARQIDVLREVLLG 355 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LL DDPTL+PRDI+VMCPDI+TYAPLIVAGFGLG+V HPAHRLRV LADRALTQTNP Sbjct 356 LLADDPTLEPRDILVMCPDIETYAPLIVAGFGLGDVVSGAHPAHRLRVTLADRALTQTNP 415 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VA +LL +A RATAS++LNLA+AAPVR +FGF DDDLD I WVRE+NIRWGFD Sbjct 416 LLGVARQLLGLAGGRATASEVLNLAEAAPVRLRFGFTDDDLDAIGDWVREANIRWGFDRG 475 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HR YG+D V NTWRFG+DR+L GVAMS+DS AWLDT LPLDDV SNRVELAGRLAE+V Sbjct 476 HRHPYGVD-FVQNTWRFGIDRVLAGVAMSDDSHAWLDTTLPLDDVSSNRVELAGRLAEYV 534 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 +RL VV LSGA L WL L+ G+D LTA +D WQ +QV RE AD+LA AG+ A Sbjct 535 DRLRSVVESLSGAAALNDWLARLSEGLDALTAVSDADLWQTSQVGRELADILAAAGAHAD 594 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 LRL D+RALLD LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPR Sbjct 595 VELRLSDIRALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRSG 654 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDDVLAR+PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQ +PPAVP+ Sbjct 655 VVDGDDVLARDPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQRKPPAVPVM 714 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGAL--LGAKPFTFDPAALAAAQAAAG 776 ELLD LD TTSAPVRE +LV HPLQPFD NVTPG L +PFTFDP AL AA AAAG Sbjct 715 ELLDTLDVTTSAPVRETVLVEHPLQPFDVDNVTPGKLGMPAGRPFTFDPTALTAATAAAG 774 Query 777 KRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQV 836 R P + LPAPP ADV L +L+ FFKDPVKGFFRALDYTLPWDV+ VED++PV++ Sbjct 775 HRGPRPHLLGRPLPAPPPADVALDELIGFFKDPVKGFFRALDYTLPWDVEAVEDAMPVEI 834 Query 837 DALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAAL 896 DAL EW +G+RML DMLRG+ P DA +EWRRG+LPPGRLG R+A+EI +R+ LAAAA Sbjct 835 DALQEWKIGDRMLDDMLRGMTPADAQQAEWRRGSLPPGRLGWRKAQEIASRSAALAAAAR 894 Query 897 AHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQ 956 HR +A DVDV +G RR++GTV V+G RTV+VTYSKL +H+L +WI LV L A Sbjct 895 QHRTPDPRAIDVDVAIGPARRVTGTVPRVYGSRTVAVTYSKLDGRHLLASWIRLVALTAH 954 Query 957 EPGREWSALCIGR-SKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCA 1015 PG +W+A+CIGR + N RL PP VLR+LV +YDAGR P+PLPLKTS A Sbjct 955 HPGTDWTAVCIGRGGRGGNQTKERLLGPPEAAAEVLRDLVAMYDAGRCAPIPLPLKTSYA 1014 Query 1016 WAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGE 1075 WA+ P A W+T RF PG+D PAHVR WGP P L+ AG Sbjct 1015 WAETEYHRGTPLREAGWKWKTGRF-PGEDAEPAHVRVWGPHFPLSGLVS---AG------ 1064 Query 1076 ETRLGALAARLWLPLLAAE 1094 L + RLW P+L AE Sbjct 1065 ---LPDYSTRLWQPMLLAE 1080 >gi|118471772|ref|YP_885718.1| exodeoxyribonuclease V subunit gamma [Mycobacterium smegmatis str. MC2 155] gi|118173059|gb|ABK73955.1| exodeoxyribonuclease V, gamma subunit [Mycobacterium smegmatis str. MC2 155] Length=1087 Score = 1335 bits (3454), Expect = 0.0, Method: Compositional matrix adjust. Identities = 739/1106 (67%), Positives = 845/1106 (77%), Gaps = 31/1106 (2%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGL ALL+DP PDPFA ELVLV A+GVERWLSQRLS LG Sbjct 3 MALHLHRAERTDLLADGLAALLSDPLPDPFATELVLVPAKGVERWLSQRLSNRLG----- 57 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH Sbjct 58 ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F + E ELR+GRRY+VARRLAGLFASYARQRP LL W DG LP DLAWQ LW+ Sbjct 115 FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 AL + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL T+V+LL ALA HHDLHL Sbjct 169 ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVELLTALATHHDLHL 228 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LW+AL+ +G LPRR+DTS R HPLL TLGRD+RE+QR LP TD Sbjct 229 WLPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEP-DTD 284 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EF G + PDTLLGWLQ+DIA +A RP GR DRS+QVH+CHGP+RQIDVLREVLLG Sbjct 285 EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411 LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V HPAH+LRVRLA Sbjct 345 LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404 Query 412 DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471 DRAL QTNPLL+VAA+LL +A RATAS++LNLA++APVRA+FGF DDDLD IT W RE+ Sbjct 405 DRALVQTNPLLAVAAQLLALAGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464 Query 472 NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531 NIRWGFD HRR YG++ +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE Sbjct 465 NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523 Query 532 LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591 LAGR A+FVE+L V LSG RPL WLDAL GID L ++ W AQ+QREFA++ A Sbjct 524 LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583 Query 592 RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651 RAG A L RL DVRALLD LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD Sbjct 584 RAGDTATSL-RLADVRALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642 Query 652 GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711 GVFPRL DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R Sbjct 643 GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702 Query 712 PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771 PPAVPLAEL+D L TT + +L HPLQPFD++NV PGAL+ +PFTFD AL AA Sbjct 703 PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761 Query 772 QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831 +A++G+R AF S LP P DV L DLL+FFKDPVKGFFRALDYTLPWDV+ V D Sbjct 762 RASSGERAMRPAFFSDPLPPPLPDDVALEDLLNFFKDPVKGFFRALDYTLPWDVEGVSDV 821 Query 832 IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891 +PV +DAL EWTVG+RML D+LRG+ P A +EWRRGTLPPG+LG RRA +R++ L Sbjct 822 MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881 Query 892 AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951 AA AL RD GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL KH+L +WI L+ Sbjct 882 AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941 Query 952 TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011 LAA P R+W A+CIGR P +PV +L +LV +YDAGRREPLPLP+K Sbjct 942 ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001 Query 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071 TS AWA+AR G DP A W++ R+ PG+D PAHVRAWG A L+ R GEE Sbjct 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060 Query 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097 GE RLGA ++RLWLPLL AE V Sbjct 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086 >gi|5678921|gb|AAD46807.1|AF157643_1 RecC [Mycobacterium smegmatis] Length=1085 Score = 1334 bits (3453), Expect = 0.0, Method: Compositional matrix adjust. Identities = 739/1106 (67%), Positives = 845/1106 (77%), Gaps = 31/1106 (2%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGL ALL+DP PDPFA ELVLV A+GVERWLSQRLS LG Sbjct 1 MALHLHRAERTDLLADGLAALLSDPLPDPFATELVLVPAKGVERWLSQRLSNRLG----- 55 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH Sbjct 56 ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 112 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 F + E ELR+GRRY+VARRLAGLFASYARQRP LL W DG LP DLAWQ LW+ Sbjct 113 FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 166 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 AL + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL T+V+LL ALA HHDLHL Sbjct 167 ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVELLTALATHHDLHL 226 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LW+AL+ +G LPRR+DTS R HPLL TLGRD+RE+QR LP TD Sbjct 227 WLPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEP-DTD 282 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EF G + PDTLLGWLQ+DIA +A RP GR DRS+QVH+CHGP+RQIDVLREVLLG Sbjct 283 EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 342 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411 LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V HPAH+LRVRLA Sbjct 343 LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 402 Query 412 DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471 DRAL QTNPLL+VAA+LL +A RATAS++LNLA++APVRA+FGF DDDLD IT W RE+ Sbjct 403 DRALVQTNPLLAVAAQLLALAGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 462 Query 472 NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531 NIRWGFD HRR YG++ +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE Sbjct 463 NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 521 Query 532 LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591 LAGR A+FVE+L V LSG RPL WLDAL GID L ++ W AQ+QREFA++ A Sbjct 522 LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 581 Query 592 RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651 RAG A L RL DVRALLD LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD Sbjct 582 RAGDTATSL-RLADVRALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 640 Query 652 GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711 GVFPRL DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R Sbjct 641 GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 700 Query 712 PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771 PPAVPLAEL+D L TT + +L HPLQPFD++NV PGAL+ +PFTFD AL AA Sbjct 701 PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 759 Query 772 QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831 +A++G+R AF S LP P DV L DLL+FFKDPVKGFFRALDYTLPWDV+ V D Sbjct 760 RASSGERAMRPAFFSDPLPPPLPDDVALEDLLNFFKDPVKGFFRALDYTLPWDVEGVSDV 819 Query 832 IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891 +PV +DAL EWTVG+RML D+LRG+ P A +EWRRGTLPPG+LG RRA +R++ L Sbjct 820 MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 879 Query 892 AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951 AA AL RD GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL KH+L +WI L+ Sbjct 880 AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 939 Query 952 TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011 LAA P R+W A+CIGR P +PV +L +LV +YDAGRREPLPLP+K Sbjct 940 ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 999 Query 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071 TS AWA+AR G DP A W++ R+ PG+D PAHVRAWG A L+ R GEE Sbjct 1000 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1058 Query 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097 GE RLGA ++RLWLPLL AE V Sbjct 1059 FEGETHRLGAYSSRLWLPLLRAERPV 1084 >gi|307083131|ref|ZP_07492244.1| putative exodeoxyribonuclease V, gamma subunit [Mycobacterium tuberculosis SUMu012] gi|308367158|gb|EFP56009.1| putative exodeoxyribonuclease V, gamma subunit [Mycobacterium tuberculosis SUMu012] Length=676 Score = 1331 bits (3445), Expect = 0.0, Method: Compositional matrix adjust. Identities = 675/676 (99%), Positives = 676/676 (100%), Gaps = 0/676 (0%) Query 312 LLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLGLLEDDPTLQPR 371 +LGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLGLLEDDPTLQPR Sbjct 1 MLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLGLLEDDPTLQPR 60 Query 372 DIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNPLLSVAAELLTI 431 DIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNPLLSVAAELLTI Sbjct 61 DIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNPLLSVAAELLTI 120 Query 432 AETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPTHRRRYGLDTVV 491 AETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPTHRRRYGLDTVV Sbjct 121 AETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPTHRRRYGLDTVV 180 Query 492 HNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFVERLHHVVGGLS 551 HNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFVERLHHVVGGLS Sbjct 181 HNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFVERLHHVVGGLS 240 Query 552 GARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPLLRLPDVRALLD 611 GARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPLLRLPDVRALLD Sbjct 241 GARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLARAGSRAAPLLRLPDVRALLD 300 Query 612 AQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHPDGDDVLAREPM 671 AQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHPDGDDVLAREPM Sbjct 301 AQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHPDGDDVLAREPM 360 Query 672 TGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAELLDALDQTTSAP 731 TGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAELLDALDQTTSAP Sbjct 361 TGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAELLDALDQTTSAP 420 Query 732 VRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCPPTAFISGRLPA 791 VRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCPPTAFISGRLPA Sbjct 421 VRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCPPTAFISGRLPA 480 Query 792 PPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRD 851 PPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRD Sbjct 481 PPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRD 540 Query 852 MLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVD 911 MLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVD Sbjct 541 MLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVD 600 Query 912 LGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGREWSALCIGRSK 971 LGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGREWSALCIGRSK Sbjct 601 LGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGREWSALCIGRSK 660 Query 972 TRNHIARRLFVPPPDP 987 TRNHIARRLFVPPPDP Sbjct 661 TRNHIARRLFVPPPDP 676 >gi|145225705|ref|YP_001136383.1| exodeoxyribonuclease V subunit gamma [Mycobacterium gilvum PYR-GCK] gi|145218191|gb|ABP47595.1| DNA helicase/exodeoxyribonuclease V, gamma subunit [Mycobacterium gilvum PYR-GCK] Length=1083 Score = 1325 bits (3429), Expect = 0.0, Method: Compositional matrix adjust. Identities = 710/1100 (65%), Positives = 830/1100 (76%), Gaps = 23/1100 (2%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRA+RTDLLADGLGA+L+DP DPFA++LVLV+ARG ERWLSQRLS VLG G G+ Sbjct 1 MALHLHRADRTDLLADGLGAMLSDPPADPFAEDLVLVSARGTERWLSQRLSHVLGRGSGQ 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DG+CAG+ FR+P+SLIAE+TGT + DPWSP+A+ WPLLAVID L EPWC TL +HLGH Sbjct 61 -DGICAGVTFRHPRSLIAELTGTREHDPWSPDAMVWPLLAVIDDCLAEPWCSTLGAHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FA + E ELR+GRRY+VARRLAGLFASYA QRP LL WL G L DL WQP L+R Sbjct 120 FADGE-ERELRQGRRYAVARRLAGLFASYATQRPRLLEDWLAGRTDGLDADLRWQPELYR 178 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV V ADPPHVRH +T+ARL D P DLP RLSLFGHTRL T+++LL A+A HHDLHL Sbjct 179 ALVDRVQADPPHVRHAETVARLVDSPTDLPERLSLFGHTRLPVTEIELLAAVATHHDLHL 238 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LW +L + ++PRR DTS R HPLL TLGRD+RELQR LP +D Sbjct 239 WLPHPSDALWTSLRDVRD---VIPRRDDTSHRRVGHPLLATLGRDLRELQRCLPTDTVSD 295 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E LG+ +PDTLLGWLQ+DI + R GR+ DRSVQVH+CHGPARQ+DVLREVLLG Sbjct 296 ESLGSVARPDTLLGWLQSDIGADRVRAEGRTHDAGDRSVQVHSCHGPARQVDVLREVLLG 355 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 +LEDDPTL+PRDI+VMCPDI+ YAPLIVAGFGLG+V HPAHRLRV+LADRALTQTNP Sbjct 356 MLEDDPTLEPRDILVMCPDIEAYAPLIVAGFGLGDVVSGAHPAHRLRVKLADRALTQTNP 415 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VA LL +A +RATA ++L++A+AAPVRA+FGF+DDDLD + TWVRESNIRWGFD Sbjct 416 LLGVARRLLELAGSRATAGEVLDVAEAAPVRARFGFSDDDLDAVGTWVRESNIRWGFDRD 475 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR YG+D V NTWRFG+DR+L GVAMS+DS+AWLDT LPLDDV SNRVELAGRLAEFV Sbjct 476 HRRPYGVD-FVQNTWRFGIDRVLAGVAMSDDSRAWLDTTLPLDDVSSNRVELAGRLAEFV 534 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 +RL V L+G L WL + TG+ LTA D WQ +Q++RE AD+ A AG A Sbjct 535 DRLRDAVESLTGTAMLADWLARIRTGVSELTAVPDSDLWQHSQLERELADIAAAAGVHAG 594 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 LRL DVR+LLD LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPR+ Sbjct 595 TELRLSDVRSLLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRVG 654 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD LAR+PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQ RPPAVP+ Sbjct 655 VVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQRRPPAVPVV 714 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLG--AKPFTFDPAALAAAQAAAG 776 ELLD LD TTS+PVR+R+ +HPLQPFD NVTPG L PFTFDP L AA+A G Sbjct 715 ELLDTLDVTTSSPVRDRVHTSHPLQPFDIANVTPGELGMPVGTPFTFDPTTLTAARATTG 774 Query 777 KRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQV 836 R ++ LPAPPA DV L DL+ FF+DPVKGFFRALD+TLPWDVD ++D+IPV V Sbjct 775 DREEHRPLLAEPLPAPPADDVALDDLIGFFRDPVKGFFRALDFTLPWDVDGLDDAIPVDV 834 Query 837 DALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAAL 896 DAL EW +G+R+L DM RG+ P A +EWRRG+LPPGRLG RRA+EI R+ LAAAA Sbjct 835 DALQEWKIGQRLLDDMQRGMSPAQAQQAEWRRGSLPPGRLGWRRAQEITTRSAALAAAAQ 894 Query 897 AHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQ 956 +R A D+DV +G RRL+GTV ++G R V+VTYSKLA +H+L +WI LV L A Sbjct 895 QYRTPDPHAVDIDVAVGPARRLTGTVPRLYGERMVAVTYSKLAGRHLLESWIRLVALTAH 954 Query 957 EPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 PG +W+A+CIGR RL PP VL +L+ +YDAGRR P+PLPLKTS AW Sbjct 955 RPGTDWTAVCIGRGDRGRPTRERLLGPPDSAAEVLADLIAMYDAGRRAPIPLPLKTSYAW 1014 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE 1076 A+ P A W+T R+ PG+D PAH+R WGP P E L+ AG Sbjct 1015 AETDFHRGQPLREAGWKWKTGRY-PGEDQDPAHIRVWGPHLPLEDLVA---AG------- 1063 Query 1077 TRLGALAARLWLPLLAAEGS 1096 L AARLWLP+L AE S Sbjct 1064 --LPGFAARLWLPMLRAERS 1081 >gi|315446056|ref|YP_004078935.1| DNA helicase/exodeoxyribonuclease V, subunit gamma [Mycobacterium sp. Spyr1] gi|315264359|gb|ADU01101.1| DNA helicase/exodeoxyribonuclease V, gamma subunit [Mycobacterium sp. Spyr1] Length=1083 Score = 1321 bits (3418), Expect = 0.0, Method: Compositional matrix adjust. Identities = 711/1100 (65%), Positives = 831/1100 (76%), Gaps = 23/1100 (2%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRA+RTDLLADGLGA+L+DP DPFA++LVLV+ARG ERWLSQRLS VLG G G+ Sbjct 1 MALHLHRADRTDLLADGLGAMLSDPPADPFAEDLVLVSARGTERWLSQRLSHVLGRGSGQ 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DG+CAG+ FR+P+SLIAE+TGT + DPWSP+A+ WPLLAVID L EPWC TL +HLGH Sbjct 61 -DGICAGVTFRHPRSLIAELTGTREHDPWSPDAMVWPLLAVIDDCLAEPWCSTLGAHLGH 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FA + E ELR+GRRY+VARRLAGLFASYA QRP LL WL G L DL WQP L+R Sbjct 120 FADGE-ERELRQGRRYAVARRLAGLFASYATQRPRLLEDWLAGRTDGLDADLRWQPELYR 178 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALV V ADPPHVRH +T+ARL D P DLP RLSLFGHTRL T+++LL A+A HHDLHL Sbjct 179 ALVDRVQADPPHVRHAETVARLVDSPTDLPERLSLFGHTRLPVTEIELLAAVATHHDLHL 238 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSD LW +L + ++PRR DTS R HPLL TLGRD+RELQR LP +D Sbjct 239 WLPHPSDALWTSLRDVRD---VIPRRDDTSHRRVGHPLLATLGRDLRELQRCLPTDTVSD 295 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 E LG+ +PDTLLGWLQ+DI + R GR+ DRSVQVH+CHGPARQ+DVLREVLLG Sbjct 296 ESLGSVARPDTLLGWLQSDIGADRVRAEGRTHDAGDRSVQVHSCHGPARQVDVLREVLLG 355 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 +LEDDPTL+PRDI+VMCPDI+ YAPLIVAGFGLG+V HPAHRLRV+LADRALTQTNP Sbjct 356 MLEDDPTLEPRDILVMCPDIEAYAPLIVAGFGLGDVVSGAHPAHRLRVKLADRALTQTNP 415 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LL VA LL +A +RATA ++L++A+AAPVRA+FGF+DDDLD + TWVRESNIRWGFD Sbjct 416 LLGVARRLLELAGSRATAGEVLDVAEAAPVRARFGFSDDDLDAVGTWVRESNIRWGFDRD 475 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRR YG+D V NTWRFG+DR+L GVAMS+DS+AWLDT LPLDDV SNRVELAGRLAEFV Sbjct 476 HRRPYGVD-FVQNTWRFGIDRVLAGVAMSDDSRAWLDTTLPLDDVSSNRVELAGRLAEFV 534 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--WQRAQVQREFADVLARAGSRAA 598 +RL V L+G L WL + TG+ LTA D WQ +Q++RE AD+ A AG A Sbjct 535 DRLRDAVESLTGTAMLADWLARIRTGVSELTAVPDSDLWQHSQLERELADIAAAAGVHAG 594 Query 599 PLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLS 658 LRL DVR+LLD LAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPR+ Sbjct 595 TELRLSDVRSLLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRVG 654 Query 659 HPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLA 718 DGDD LAR+PMTGERDIRSEDRQLLLDAIGAAT+ LVITYTGA+E +GQ RPPAVP+ Sbjct 655 VVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQRRPPAVPVV 714 Query 719 ELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLG--AKPFTFDPAALAAAQAAAG 776 ELLD LD TTS+PVR+R+ +HPLQPFD NVTPGAL PFTFDP L AA+A G Sbjct 715 ELLDTLDVTTSSPVRDRVHTSHPLQPFDIANVTPGALNMPVNTPFTFDPTTLTAARATTG 774 Query 777 KRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDSIPVQV 836 R ++ LPAPPA DV L DL+ FF+DPVKGFFRALD+TLPW+VD ++D+IPV V Sbjct 775 DREEHRPLLAEPLPAPPADDVALDDLIGFFRDPVKGFFRALDFTLPWEVDGLDDAIPVDV 834 Query 837 DALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAAL 896 DAL EW +G+R+L DM RG+ P A +EWRRG+LPPGRLG RRA+EI R+ LAAAA Sbjct 835 DALQEWKIGQRLLDDMQRGMSPAQAQQAEWRRGSLPPGRLGWRRAQEITARSAALAAAAQ 894 Query 897 AHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQ 956 +R A D+DV +G RRL+GTV ++G R V+VTYSKLA +H+L +WI LV L A Sbjct 895 QYRTPDPHAVDIDVAVGPARRLTGTVPRLYGERMVAVTYSKLAGRHLLESWIRLVALTAH 954 Query 957 EPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKTSCAW 1016 PG +W+A+CIGR RL PP VL +L+ +YDAGRR P+PLPLKTS AW Sbjct 955 RPGTDWTAVCIGRGDRGRPTRERLLGPPDSAAEVLADLIAMYDAGRRAPIPLPLKTSYAW 1014 Query 1017 AQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEE 1076 A+ P A W+T R+ PG+D PAHVR WGP P E L+ AG Sbjct 1015 AETDFHRGQPLREAGWKWKTGRY-PGEDQDPAHVRVWGPHFPLEDLVA---AG------- 1063 Query 1077 TRLGALAARLWLPLLAAEGS 1096 L AARLWLP+L AE S Sbjct 1064 --LPDFAARLWLPMLRAERS 1081 >gi|284031864|ref|YP_003381795.1| exodeoxyribonuclease V subunit gamma [Kribbella flavida DSM 17836] gi|283811157|gb|ADB32996.1| exodeoxyribonuclease V, gamma subunit [Kribbella flavida DSM 17836] Length=1102 Score = 1255 bits (3247), Expect = 0.0, Method: Compositional matrix adjust. Identities = 681/1104 (62%), Positives = 809/1104 (74%), Gaps = 16/1104 (1%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M L+LHRAERTD+LADGLG LLA P DPFA+ELV+V A+G+ERWLSQRL+ LG G Sbjct 1 MTLYLHRAERTDVLADGLGELLATPLADPFAEELVVVPAKGIERWLSQRLAHRLGAAEGS 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG+ F +P+SL++ + G DDPW+ +A+AWPLLAV+D SLD+ WC +A HLG Sbjct 61 GDGVCAGVRFTSPRSLVSAVLGLDQDDPWAADAMAWPLLAVLDESLDDAWCEPVARHLGQ 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPG-----DLAWQ 175 F + AEAELRRGRRY+VA RLA LFA+YA QRP LL W DG + G DLAWQ Sbjct 121 F-DSGAEAELRRGRRYAVAARLARLFAAYAVQRPALLVDWGDGRDTDGRGVTIDDDLAWQ 179 Query 176 PPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACTDVQLLDALA 233 P LWR LV + A PP RH T+A+LRD DLPARLSLFGHTRL T+V+LL ALA Sbjct 180 PELWRRLVDRIDAPPPPARHLSTVAQLRDRSESLDLPARLSLFGHTRLPLTEVELLSALA 239 Query 234 VHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRAL 293 H D+HLWLPHPS ELW L G D R DTS + A+HPLL TLGRD RELQ AL Sbjct 240 EHRDVHLWLPHPSGELWDRLTGRTAGD----RAADTSHQMAEHPLLATLGRDSRELQLAL 295 Query 294 PAARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDV 353 A A D L + ++LLGWLQ D+ GN GR + DRSVQVHACHG ARQ+DV Sbjct 296 AAVPAVDRHLPSPAARESLLGWLQNDLRGNKVSAEGRRPAAEDRSVQVHACHGTARQVDV 355 Query 354 LREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADR 413 LR+VLLG+L+ DPTL+PRDI+VMCPDI+TYAPLI A FGLG++ HPAHRLRV+LADR Sbjct 356 LRDVLLGMLQADPTLEPRDILVMCPDIETYAPLISARFGLGDLDRYGHPAHRLRVQLADR 415 Query 414 ALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNI 473 +LTQTNPLL VA++LL +A +RATASQ+L+LA+ PVR +F F DDDLDT+T WVRE+ + Sbjct 416 SLTQTNPLLGVASQLLDLAGSRATASQVLDLAETEPVRRRFRFTDDDLDTVTAWVREAGV 475 Query 474 RWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELA 533 RW FD R R+GL NTWRFGLDR+L GV MS D+ AW+ T LPLDDVGS R+ELA Sbjct 476 RWAFDRGDRDRFGLADYPQNTWRFGLDRVLAGVTMSADAHAWIGTTLPLDDVGSTRIELA 535 Query 534 GRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLT--ACNDGWQRAQVQREFADVLA 591 GR AE+V+RL L G +PL WLDAL GI+ LT +DGWQ QV REFA+V A Sbjct 536 GRFAEYVDRLRAATDRLDGTQPLATWLDALRDGIERLTRVGADDGWQVGQVHREFAEVAA 595 Query 592 RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651 AG A LRLPDVR+LL A LAGRPTRANFR+G+LTVCTMVPMRSVPHRVVCL+GLDD Sbjct 596 GAGELAVTPLRLPDVRSLLSAHLAGRPTRANFRSGSLTVCTMVPMRSVPHRVVCLLGLDD 655 Query 652 GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711 GVFPR DGDDVLAR P+TGERD+RSEDRQL+LDAI AAT++LVITYTGA+E +GQPR Sbjct 656 GVFPRFGLADGDDVLARCPVTGERDVRSEDRQLMLDAILAATESLVITYTGANEYSGQPR 715 Query 712 PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771 PPAVPL ELLDALD+TT +PVRE ++V HPLQPFDRKN+ G L PFTFDPAAL AA Sbjct 716 PPAVPLGELLDALDRTTESPVRETVVVNHPLQPFDRKNLEAGRLGTPGPFTFDPAALVAA 775 Query 772 QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831 + G R P AF++ L P DV LADLL FF+DPVKGFFRALD TLPW+VD V D+ Sbjct 776 RVGGGSRPPRPAFLAEPLTLPGGEDVALADLLAFFRDPVKGFFRALDVTLPWEVDGVSDA 835 Query 832 IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891 +PV++D L +W+VG+RMLRDML G+HPD A ++EWRRGTLPPGRLG R A ++R+ AR L Sbjct 836 MPVEIDNLEKWSVGDRMLRDMLAGIHPDAALNAEWRRGTLPPGRLGWRTATDLRDIARGL 895 Query 892 AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951 A AA HR G A+DVDVDLG GRRL+GTV V G R VSV+YS+L K +L +WI L+ Sbjct 896 AVAAYPHRQGGATAYDVDVDLGGGRRLTGTVPGVHGYRLVSVSYSRLDAKQLLTSWIQLL 955 Query 952 TLAAQEPGREWSALCIGRSKTRNHIARRLFVP-PPDPVAVLRELVLLYDAGRREPLPLPL 1010 L+A + W+AL IGR ++ A RLF P +L +L+ +YD GRREPLPLPL Sbjct 956 ALSANDEDHNWTALAIGRPRSGRTPASRLFGPVGAQARTLLADLISVYDGGRREPLPLPL 1015 Query 1011 KTSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGE 1070 KTS AW QARR +P A W+ + G++ PAHVR WGP AP +VLL R GE Sbjct 1016 KTSFAWCQARRTDDEPMIAAGRRWRPANY-DGENADPAHVRVWGPNAPLKVLLEPTRPGE 1074 Query 1071 EVAGEETRLGALAARLWLPLLAAE 1094 + GE TRLGA AAR+W P+L E Sbjct 1075 QWPGEPTRLGAYAARVWEPMLRFE 1098 >gi|307078568|ref|ZP_07487738.1| putative exodeoxyribonuclease V, gamma subunit [Mycobacterium tuberculosis SUMu011] gi|308363484|gb|EFP52335.1| putative exodeoxyribonuclease V, gamma subunit [Mycobacterium tuberculosis SUMu011] Length=594 Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/590 (99%), Positives = 589/590 (99%), Gaps = 0/590 (0%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR Sbjct 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH Sbjct 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR Sbjct 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180 Query 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL Sbjct 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240 Query 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD Sbjct 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300 Query 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG Sbjct 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360 Query 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP Sbjct 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNP 420 Query 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT Sbjct 421 LLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPT 480 Query 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV Sbjct 481 HRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFV 540 Query 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVL 590 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFA+ L Sbjct 541 ERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFAEHL 590 >gi|326328710|ref|ZP_08195049.1| exodeoxyribonuclease V, gamma subunit [Nocardioidaceae bacterium Broad-1] gi|325953520|gb|EGD45521.1| exodeoxyribonuclease V, gamma subunit [Nocardioidaceae bacterium Broad-1] Length=1121 Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 627/1122 (56%), Positives = 760/1122 (68%), Gaps = 33/1122 (2%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M +HLHRA RTDLLAD LG LL+ P DPFA E+V+V ARGVERWLSQRL+ LG GR Sbjct 1 MVVHLHRAPRTDLLADSLGELLSVPLGDPFATEVVVVPARGVERWLSQRLAHRLGAAEGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 +DG+CAG+ FR P SL AEI GT D+DPW+PE+L WP+LA IDASLDEPW R LA HLGH Sbjct 61 SDGICAGVDFRTPWSLFAEIAGTGDEDPWAPESLTWPVLAAIDASLDEPWARPLAQHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAW-----LDGDLGELPGDLAWQ 175 T+ E RRGRR ++ARRLA LFA+YA QRP ++A W DG E+ DLAWQ Sbjct 121 GDATE-EGVRRRGRRLALARRLARLFAAYADQRPAVVADWSAGRDKDGLGAEIAEDLAWQ 179 Query 176 PPLWRALVTTVGADPPHVRHDKTIARLRDGPAD--LPARLSLFGHTRLACTDVQLLDALA 233 PPLWRA+ VG P R T+A+L+ P + LP R+SLFGHTRL+ TDV+L+ AL Sbjct 180 PPLWRAVAGLVGGPTPMERQAATVAKLKKAPGEFELPERVSLFGHTRLSATDVELVAALG 239 Query 234 VHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRAL 293 H ++HLWLPHPS+ LW ALAG DG + R D S A HPLL TLGRD RELQR+L Sbjct 240 EHREVHLWLPHPSEALWEALAGL---DGTVARTADRSHDAVGHPLLATLGRDTRELQRSL 296 Query 294 PAARATDEFLGATTKPDTLLGWLQADIAGN-APRPAGRSLSDADRSVQVHACHGPARQID 352 G LLGWLQADI GN A R L+ DRS+QVHACHG ARQ++ Sbjct 297 NGFSGEAITDGVFDTDGRLLGWLQADIRGNTVGEAAARVLAPEDRSIQVHACHGEARQVE 356 Query 353 VLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDC-HPAHRLRVRLA 411 VLREVLLGLLEDDPTL+PRD++VMCPDI+T+APLI AGFGLGE+ G+ HPAHRLRV+LA Sbjct 357 VLREVLLGLLEDDPTLEPRDVLVMCPDIETFAPLIEAGFGLGEMIGETGHPAHRLRVKLA 416 Query 412 DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471 DR+LT+TNPLL VA LL +A RA S +L+LA PVR +FG DD L+ + W +++ Sbjct 417 DRSLTRTNPLLDVATRLLDLAGGRAGVSDVLDLAHLDPVRRRFGLNDDALEQLEDWAKDA 476 Query 472 NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531 IRWGFD HR +GL+T V NTWRFG+DRILTGVAMSEDS WLDT LPLDDVGS VE Sbjct 477 GIRWGFDAEHREPFGLETYVANTWRFGMDRILTGVAMSEDSATWLDTTLPLDDVGSGSVE 536 Query 532 LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTAC--NDGWQRAQVQREFADV 589 LAG+ AE V+RL V L+G PL WL + G+ LT+ ND WQ QV RE + V Sbjct 537 LAGKFAELVDRLEQVTDELAGVHPLEHWLKVIEEGVAALTSVSANDEWQSGQVTRELSRV 596 Query 590 LARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGL 649 A LRLPDVRALL A+LAGR TRANFRTGTLTV T+VPMRSVPHRVVCL+G+ Sbjct 597 RDAARGHEVDELRLPDVRALLGARLAGRATRANFRTGTLTVSTLVPMRSVPHRVVCLLGM 656 Query 650 DDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQ 709 DDGVFPR+ DGDD+LAR+P TGERD+RSEDRQL LDA+ AAT+TLV+TYTGA+E +GQ Sbjct 657 DDGVFPRVGITDGDDLLARDPQTGERDLRSEDRQLFLDALLAATETLVVTYTGANEYSGQ 716 Query 710 PRPPAVPLAELLDALDQTTSA----PVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDP 765 PRPPAVPL ELLDALD T + PV+E + HPLQPFD +N+TPGAL+ F+FD Sbjct 717 PRPPAVPLGELLDALDATAVSADGRPVKEVVTTRHPLQPFDPRNLTPGALVAGHSFSFDR 776 Query 766 AALAAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFR-ALDYTLPWD 824 +A A A AA R P + L A DVTL +LL F++ PV+ FFR L+ LP D Sbjct 777 SAEAGAVAAVSDRVEPPELLPAPLMPTAAGDVTLEELLAFYRGPVRAFFRDRLELALPRD 836 Query 825 VDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEI 884 D + +++PV++D L +W+VG+R+L D+L G+ + A EWRRG LPP LG R ++ Sbjct 837 DDPLSEALPVELDGLGQWSVGDRLLHDLLAGMSEEQATQQEWRRGVLPPKWLGWRILTDV 896 Query 885 RNRARDLAAAALAHRD-----GHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLA 939 +A+ +AA AL R G +A DV+VDLGDGRRL+GTV V+G R V VTYS+L Sbjct 897 ITKAKPIAAEALRVRHAGISTGQARAVDVEVDLGDGRRLTGTVPQVYGDRLVPVTYSRLG 956 Query 940 PKHVLPAWIGLVTLAAQEPGREWSALCIGR---SKTRNHIARRLFVP-PPDPVAVLRELV 995 + + +W+ LV LAA + R WSA +GR S++R P V VLR+LV Sbjct 957 ARQRIESWVQLVALAASDEDRAWSAWTLGRPGNSRSRTPFGLSQLGPLDHTAVDVLRDLV 1016 Query 996 LLYDAGRREPLPLPLKTSCAWAQARRDG---QDPYPPARECWQTNRFRPGDDDAPAHVRA 1052 L D G PLPLPLKTS A+A+ RR D A W RF G++ VRA Sbjct 1017 RLRDKGLSAPLPLPLKTSLAYARQRRTQAGVDDALYKAGWEWNDGRFE-GEESDVEQVRA 1075 Query 1053 WGPRAPFEVLLGKPRAGEEVAGEETRLGALAARLWLPLLAAE 1094 WG ++ L P GEE GE +R GALA R+W PLL AE Sbjct 1076 WGAKSAIPGLGDPPEPGEEFDGETSRFGALAMRVWSPLLQAE 1117 >gi|307078567|ref|ZP_07487737.1| hypothetical protein TMKG_03913 [Mycobacterium tuberculosis SUMu011] gi|308363507|gb|EFP52358.1| hypothetical protein TMKG_03913 [Mycobacterium tuberculosis SUMu011] Length=509 Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/509 (99%), Positives = 509/509 (100%), Gaps = 0/509 (0%) Query 589 VLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVG 648 +LARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVG Sbjct 1 MLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVG 60 Query 649 LDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTG 708 LDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTG Sbjct 61 LDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTG 120 Query 709 QPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAAL 768 QPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAAL Sbjct 121 QPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAAL 180 Query 769 AAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTV 828 AAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTV Sbjct 181 AAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTV 240 Query 829 EDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRA 888 EDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRA Sbjct 241 EDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRA 300 Query 889 RDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWI 948 RDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWI Sbjct 301 RDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWI 360 Query 949 GLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPL 1008 GLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPL Sbjct 361 GLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPL 420 Query 1009 PLKTSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRA 1068 PLKTSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRA Sbjct 421 PLKTSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRA 480 Query 1069 GEEVAGEETRLGALAARLWLPLLAAEGSV 1097 GEEVAGEETRLGALAARLWLPLLAAEGSV Sbjct 481 GEEVAGEETRLGALAARLWLPLLAAEGSV 509 >gi|119714518|ref|YP_921483.1| DNA helicase/exodeoxyribonuclease V subunit gamma [Nocardioides sp. JS614] gi|119535179|gb|ABL79796.1| DNA helicase/exodeoxyribonuclease V, gamma subunit [Nocardioides sp. JS614] Length=1113 Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust. Identities = 598/1134 (53%), Positives = 728/1134 (65%), Gaps = 73/1134 (6%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M L +HRA RTD+LAD LG LL P DPFA+E+V+V A+GVERWL+QRLS LG GP Sbjct 1 MTLQIHRASRTDVLADALGDLLRTPLADPFAEEVVVVPAKGVERWLTQRLSHRLGAGPRG 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 DGVCAG+ F NP+SL++ + G DDPW PE L WPLLA ID SL E TL HLGH Sbjct 61 DDGVCAGVRFLNPRSLVSLLLGRERDDPWDPERLVWPLLATIDESLGEREFATLGRHLGH 120 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGE------LPGDLAW 174 A+ ELRR RRYSVA RLA LFASYA QRP L+ AW +G GE LP DLAW Sbjct 121 -GVDGADGELRRNRRYSVALRLAHLFASYALQRPSLVTAWREGRDGEHGGEQGLPPDLAW 179 Query 175 QPPLWRALVTTVGADPPHVRHDKTIARLRDGPADLPA--RLSLFGHTRLACTDVQLLDAL 232 QP LWR L+ V A PP VRH +T A L+ G LP RLSLFGHTR+ T+V LL AL Sbjct 180 QPELWRRLIAQVDAPPPDVRHAQTCAALQAGGDGLPLPDRLSLFGHTRIPVTEVALLKAL 239 Query 233 AVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRA 292 H D+HL+LP PS LW LA G G++PR D S HPLL +LGRD REL+R Sbjct 240 GEHRDVHLFLPQPSPVLWDDLADLGGPGGVVPRAADDSVERVGHPLLASLGRDARELRRL 299 Query 293 LPAARATD------EFLGATTKPDTLLGWLQADI-AGNAP---RPAGRSLSDADRSVQVH 342 L + + G+TT P TLLGWLQ D+ A +AP + R L D S+QVH Sbjct 300 LDGVSSEEVRPPAGTPTGSTTDPVTLLGWLQHDLRANHAPSYDERSTRELDPDDHSLQVH 359 Query 343 ACHGPARQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHP 402 ACHGPARQ+DVLREVL+GLLEDDPTL+PRD++VMCPDI+TYAPLI AGFGL D HP Sbjct 360 ACHGPARQVDVLREVLVGLLEDDPTLEPRDVLVMCPDIETYAPLISAGFGLATT--DGHP 417 Query 403 AHRLRVRLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLD 462 AHRLRV+LADRALT TNPLL+VA +LL +A R TAS +L+LA PVR +FGF DD+LD Sbjct 418 AHRLRVKLADRALTSTNPLLAVAGDLLDLAGGRVTASDVLDLAGTDPVRRRFGFTDDELD 477 Query 463 TITTWVRESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPL 522 ++ WV + +RWG D R + ++ HNTWR GLDRIL GVAMS D L LPL Sbjct 478 RVSRWVARAGVRWGLDEESRAAFRMERFPHNTWRTGLDRILLGVAMSGDDHHHLGRGLPL 537 Query 523 DDVGSNRVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLT--ACNDGWQRA 580 DDV S+ ++LAGRLAE V R+ + L+GAR + W L G+ L A +D WQ Sbjct 538 DDVASSEIDLAGRLAELVARVDRTLTVLAGARTVADWATGLRDGVRSLVDVAADDAWQVP 597 Query 581 QVQREFADVLARAGSRAAPL-LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSV 639 Q +RE A A S L LRL DVRA+L+++LAGRPTRANFRTG+LTV TMVPMRSV Sbjct 598 QFERELGR--AAASSHEGGLELRLADVRAMLESRLAGRPTRANFRTGSLTVATMVPMRSV 655 Query 640 PHRVVCLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVIT 699 PHRVVCLVGLDDGVFPR DGDDVL R P+TGERD+RSEDRQLLLDA+ AAT+ LVIT Sbjct 656 PHRVVCLVGLDDGVFPRAGAVDGDDVLGRHPLTGERDVRSEDRQLLLDAVLAATEHLVIT 715 Query 700 YTGADERTGQPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAK 759 Y+GADE++G PPAVPL E+LDA D+TT+APVR+R+L HPLQP+D +N T + Sbjct 716 YSGADEQSGASLPPAVPLGEILDAADRTTNAPVRDRVLTRHPLQPYDARNFTR-----ER 770 Query 760 PFTFDPAALAAAQAAAGKR----------CPPTAFISGRLPAPPAADVTLADLLDFFKDP 809 PF+FD AALA A++A G R PP + GR AADV+L DL DF P Sbjct 771 PFSFDTAALAGARSARGVRREPPPLLDGPLPPRLALDGR-----AADVSLQDLRDFLGHP 825 Query 810 VKGFFRA-LDYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRR 868 V+ F R LD P++ D + D+IPV +D+L +W +G+R+LR +L G P +E Sbjct 826 VRAFLRGRLDVATPFEPDDLADAIPVSLDSLEKWQIGDRLLRQLLAGQDPVAVLTAEQLA 885 Query 869 GTLPPGRLGVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGG 928 GTLPP LG E+ + L + RDG ++ DVDVDL DGRRL+GTV V+G Sbjct 886 GTLPPRGLGTLALHEVAEECQRLWSRTADLRDGERRSVDVDVDLRDGRRLTGTVPGVYGS 945 Query 929 RTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPV 988 R VS+ YS+L + L AW+ L+ L+A P + W+A +G+ + +R P D Sbjct 946 RVVSLGYSRLNARQRLHAWVDLLALSATYPDQHWTAHAVGKDRAG---PKRALCGPLDHR 1002 Query 989 AV--LRELVLLYDAGRREPLPLPLKTSCAWAQARRD---GQD--PYPPARECWQT---NR 1038 AV LR+LV L D G PLP+P+KT AWA A GQD P AR W+T N+ Sbjct 1003 AVGWLRDLVDLRDRGLCAPLPVPVKTGAAWADAHARELMGQDHPPVEAARREWETDPHNQ 1062 Query 1039 FR-PGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAGEETRLGALAARLWLPLL 1091 F G+D P H R +GP AP E LL + LG A +W PLL Sbjct 1063 FGITGEDADPYHQRVYGPAAPVEALL------------DAGLGEHAWAIWEPLL 1104 >gi|258654034|ref|YP_003203190.1| exodeoxyribonuclease V subunit gamma [Nakamurella multipartita DSM 44233] gi|258557259|gb|ACV80201.1| exodeoxyribonuclease V, gamma subunit [Nakamurella multipartita DSM 44233] Length=1141 Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 568/1138 (50%), Positives = 704/1138 (62%), Gaps = 46/1138 (4%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M LH+HRA+R D LA LG LLA+P DPF ++V V RGVERWL+QRL+ LG GR Sbjct 1 MGLHVHRAQRADALAAALGDLLAEPPADPFGVDVVAVPTRGVERWLTQRLAHRLGTRDGR 60 Query 61 ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120 +DG+CA + F +P +L+ E+ G DDPW+P+A WPLLA I+AS+ EPWC LA HLG Sbjct 61 SDGICAAVRFPSPTTLVDELAGDRADDPWTPDAAVWPLLAAIEASVHEPWCALLAEHLG- 119 Query 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGD----LGE-LPGDLAWQ 175 + DA+AE RRGRRY+VARR+AGLF YA RP ++AAW G GE +P DL+WQ Sbjct 120 YRGDDAQAEHRRGRRYAVARRIAGLFDGYAEHRPEMVAAWSQGGDDDGWGEPVPADLSWQ 179 Query 176 PPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACTDVQLLDALA 233 P LWR L + A P + ARL P DLP R+SLFG T L V LL ALA Sbjct 180 PRLWRRLRDRIDAPDPVATFAQVAARLAADPGAVDLPERVSLFGATALPHRQVLLLSALA 239 Query 234 VHHDLHLWLPHPSDELWRALAGFQG-ADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRA 292 H D+HLWLPHPS LW + + G + RR D + AA HPLL ++GRDVREL+ Sbjct 240 HHRDVHLWLPHPSPVLWDRVGELRPPVPGRIRRRDDPTAGAATHPLLASMGRDVRELRTV 299 Query 293 LPAARATDEFLGATTKPDTLLGWLQADIAGN---APRPAGRSLSDA-DRSVQVHACHGPA 348 L D + A P TLLG LQ D++ N P A + + DA D SV+VHA HGP Sbjct 300 LAGRIDRDTWHRADDPPATLLGRLQRDLSDNRRPGPGMADKPVVDATDDSVRVHAAHGPG 359 Query 349 RQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRV 408 RQ+DVLR+V++GLL DDPTL P DI++MCPDI+ +APL+ FGL + D HPAH+L+V Sbjct 360 RQVDVLRDVVIGLLADDPTLHPADILIMCPDIEAFAPLLQGAFGLADSVPDGHPAHQLQV 419 Query 409 RLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWV 468 RLADRAL QTNPLL+ LL +A +R TAS +L+ A APVR +FGF DD+L T+ WV Sbjct 420 RLADRALRQTNPLLATLDRLLDLAGSRVTASDVLDFAAFAPVRHRFGFDDDELSTLADWV 479 Query 469 RESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSN 528 + RWG D HRRRYGL NTWR LDRIL GV MS++ L+TALPLD++GS Sbjct 480 AAAGARWGLDAEHRRRYGLAEYGQNTWRAALDRILLGVCMSDEPGNRLETALPLDEIGSA 539 Query 529 RVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTAC--NDGWQRAQVQREF 586 V+LAGRLAE ++RL VV LS + W L G+ LT+ WQ A+ + E Sbjct 540 DVDLAGRLAELIDRLATVVDTLSSRHSVQRWCAELLAGVQSLTSVPARAAWQVAEFRAEV 599 Query 587 ADVLARAGSRAAPLLR--LPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVV 644 A V A + + L L DVRALL LAGRPTRANFRTGTLTVCTM+PMRSVPHRV+ Sbjct 600 AAVQRHAAAAGSTGLELGLADVRALLAGALAGRPTRANFRTGTLTVCTMMPMRSVPHRVI 659 Query 645 CLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGAD 704 CL+GLDDGVFPR + DGDD+L REP GERD+RS+DRQL+LDAI AAT+ LVITY+GAD Sbjct 660 CLLGLDDGVFPRGAREDGDDLLIREPACGERDLRSQDRQLMLDAIVAATEKLVITYSGAD 719 Query 705 ERTGQPRPPAVPLAELLDALDQT----TSAPVRERILVTHPLQPFDRKNVTPGALLGAKP 760 ERTG RPPAVP+ ELLDALD T T VR+ +LV HPLQPFD + +T GAL P Sbjct 720 ERTGAQRPPAVPVGELLDALDDTATTATGGAVRDLVLVRHPLQPFDARTLTAGALGRVGP 779 Query 761 FTFDPAALAAAQAAAGKRCPPTAFISGRLPAP--PAADVTLADLLDFFKDPVKGFF-RAL 817 FTFDP AL A+A AG R P + LPAP P ADV LA++++ P KGF R L Sbjct 780 FTFDPVALGGARALAGPRRPAGRLVPAPLPAPDRPPADVELAEVIEVLTHPAKGFLRRRL 839 Query 818 DYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLG 877 D +P++ D D +PV +DAL EW VG+R+LRD L G+ + +EWRRG LPP LG Sbjct 840 DVAVPFEQDDPPDDLPVDLDALQEWGVGDRILRDRLAGVPEQECRQAEWRRGVLPPAALG 899 Query 878 VRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSK 937 R + + R L R +V V L DGRRL GTV V G V+V+YSK Sbjct 900 GRALERVLRDVRPLVDRTATLRAAPRHTVEVSVPLPDGRRLRGTVGGVHGIGLVTVSYSK 959 Query 938 LAPKHVLPAWIGLVTLAAQEPGREWSALCIGRS-KTRNHIARRLFVPPPDPVAVLRELVL 996 LAP+ L +W+ + L A +P W+A +GR+ + R A +P +L +LV Sbjct 960 LAPRARLQSWLAFLALTASDPALAWTAAAVGRAERGRPQCATLAALPGERARELLIDLVG 1019 Query 997 LYDAGRREPLPLPLKTSCAWAQARRDGQD---PYPPARECWQTNRFRPGDDDAPAHVRAW 1053 LY+ G R PLPLPLKT +A ARR G D A W ++ PG+ A++R W Sbjct 1020 LYEEGLRAPLPLPLKTGEKYADARRRGMDHDKAQDQAAATWTGGKY-PGERQDAANMRVW 1078 Query 1054 GPRAPFEVLLGK---PRAGEEVAGE--------------ETRLGALAARLWLPLLAAE 1094 G APF VL G P G + + R LA RLW PL E Sbjct 1079 GRDAPFSVLTGSGTDPDTGIDTGTDPGIDADTGTDRGTATGRFALLAGRLWRPLQQHE 1136 >gi|111018835|ref|YP_701807.1| exodeoxyribonuclease V gamma subunit [Rhodococcus jostii RHA1] gi|110818365|gb|ABG93649.1| exodeoxyribonuclease V gamma subunit [Rhodococcus jostii RHA1] Length=1086 Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/1111 (49%), Positives = 662/1111 (60%), Gaps = 50/1111 (4%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRAD 62 L LHRAER+ LA LG +LA P DPFA+E+V V A+GVERWL+QRLS LG PG D Sbjct 2 LVLHRAERSTTLASALGDVLATPLSDPFAREVVAVPAKGVERWLTQRLSTALGARPGVGD 61 Query 63 GVCAGIAFRNPQSLIAEI----TG-TLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASH 117 GV A I F +P L+ E TG + DDDPW+P + W LL V+D L EPWC LA H Sbjct 62 GVAANIDFPSPTRLVDECLAAATGVSADDDPWNPSRVLWALLGVVDDCLSEPWCAVLAKH 121 Query 118 LGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAW-----LDGDLGELPGDL 172 LGH + R GRRY+ A L LF SYA QRP +L W DG G L DL Sbjct 122 LGHGLPDRDPDDHRPGRRYATASHLTDLFRSYAAQRPAMLVDWAGGRDTDGAGGPLDDDL 181 Query 173 AWQPPLWRALVTTVGADPPHVRHDKTIARLRDGP--ADLPARLSLFGHTRLACTDVQLLD 230 WQ LWR L +G+ P R D ARLR P +LPARLSLFG TRLA + +L Sbjct 182 LWQAELWRRLREKIGSPAPAERLDSACARLRAEPDLVELPARLSLFGPTRLATDQIAVLA 241 Query 231 ALAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQ 290 ALAV+ D+HLWLPHPS +W +L+ AD +L R D + + HPLL +L RDVREL+ Sbjct 242 ALAVNRDVHLWLPHPSPTMWSSLST---ADSVLARADDPTALSVAHPLLSSLARDVRELE 298 Query 291 RALPAARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQ 350 L D D+LLG LQAD+ + R + AD SVQVHACHGPARQ Sbjct 299 SRLTRLDVDDLHHEGPAPRDSLLGCLQADVRDD--RAPALAECTADTSVQVHACHGPARQ 356 Query 351 IDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRL 410 ++VLRE LL L EDDPTL+PRD++VMCPD+++YAPLI A FG +V G HP HRLRVRL Sbjct 357 VEVLRECLLHLFEDDPTLEPRDVLVMCPDVESYAPLIRAAFG-QDVLG--HPGHRLRVRL 413 Query 411 ADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRE 470 ADRAL QTNP+L+V + LL +A+ R TASQ+L+L+ AAPVR +F F DDDL+ I W Sbjct 414 ADRALHQTNPVLAVVSTLLELADARVTASQVLDLSAAAPVRRRFRFGDDDLERIREWATA 473 Query 471 SNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRV 530 + RWG P R +GL NT+ LDRIL G A E WL ALPLDDV SN + Sbjct 474 TGARWGIGPRQRAAFGLGDFPQNTFTTALDRILLGAAADESDGEWLALALPLDDVDSNDI 533 Query 531 ELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLT--ACNDGWQRAQVQREFAD 588 +L GRLAEFV+RL + GL G + + W AL +DLL + D WQ AQ +RE Sbjct 534 DLTGRLAEFVDRLDVALRGLGGPQSVADWSSALTRALDLLVDVSAADTWQLAQARRELGS 593 Query 589 VLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVG 648 + G +LRL DVRA+L +LAGRPTRANFRTG LTVCTMVPMRSVPHRVV L+G Sbjct 594 AMEHGGD---AVLRLSDVRAMLATRLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLLG 650 Query 649 LDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTG 708 LDD VFPR DGDDVLAR P+ GERD RSEDRQLLLDA+ +A++ L++ YTGAD TG Sbjct 651 LDDEVFPRGVSVDGDDVLARNPLLGERDPRSEDRQLLLDAVMSASEKLLLFYTGADPVTG 710 Query 709 QPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAAL 768 RPPA+PL+ELLDA+ T + I+ HPLQPFD +N P PF+FD AAL Sbjct 711 MSRPPAIPLSELLDAVAATVGSDALPGIVTRHPLQPFDARNFRP-----EHPFSFDRAAL 765 Query 769 AAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRA-LDYTLPWDVDT 827 A A+AA P AF+ L PP DV LADL+ F P + F R L +P DVD Sbjct 766 AGARAAQHPPEPEPAFLPAPLVPPPLGDVDLADLIAFLVHPTQAFLRQRLGLRVP-DVDE 824 Query 828 -VEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRN 886 + D++ V D LA W +G+RML L G+ D +EWRRGTLPP +LG I + Sbjct 825 DLADALEVSPDPLARWDLGQRMLVARLTGVELADFRAAEWRRGTLPPFKLGESVLGGIEH 884 Query 887 RARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPA 946 L A + + G + DVDVDLG GRRL+GTV V G + TYSKL PKH L A Sbjct 885 AVESLVAVSGSVHVGRAETVDVDVDLGSGRRLTGTVGGVHGSVIATTTYSKLGPKHRLAA 944 Query 947 WIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPL 1006 W L+ +AA + EW+A+ GR R P + + L LV L D G PL Sbjct 945 WAQLLAVAASDNETEWTAVTTGRGAYSRPAWRSTLTAPENALEELVRLVELRDLGLHAPL 1004 Query 1007 PLPLKTSCAWAQARRDG---QDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLL 1063 P+ S A+A+ R G +D AR+ W ++ F D +V P Sbjct 1005 PIATGASAAYAERRHGGSSMEDAIEAARKEWSSD-FGDSRDRHITYVYGSSP-------- 1055 Query 1064 GKPRAGEEVAGEETRLGALAARLWLPLLAAE 1094 G +V G+ + A +LW PLLAAE Sbjct 1056 -----GIDVLGDAVTIENYARQLWAPLLAAE 1081 >gi|226360934|ref|YP_002778712.1| exodeoxyribonuclease V gamma chain [Rhodococcus opacus B4] gi|226239419|dbj|BAH49767.1| exodeoxyribonuclease V gamma chain [Rhodococcus opacus B4] Length=1089 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/1113 (49%), Positives = 663/1113 (60%), Gaps = 51/1113 (4%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRAD 62 L LHRAER+ LA LG +L+ P DPFA+E+V V A+GVERWL+QRLS LG PG D Sbjct 2 LVLHRAERSTTLASALGDVLSTPLSDPFAREIVAVPAKGVERWLTQRLSTALGARPGVGD 61 Query 63 GVCAGIAFRNPQSLIAEI----TG-TLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASH 117 GV A I F +P L+ E TG + DDDPW P + W LLAV+D LDEPWC LA H Sbjct 62 GVAANIDFPSPARLVDECLAAATGVSADDDPWHPSRVLWALLAVVDDCLDEPWCAVLAKH 121 Query 118 LGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAW-----LDGDLGELPGDL 172 LGH + R GRRY+ A L L+ SYA QRP +L W DG G L DL Sbjct 122 LGHCRPGSDPDDHRPGRRYATALHLTDLYRSYAAQRPEMLVDWAAGRDTDGAGGSLDDDL 181 Query 173 AWQPPLWRALVTTVGADPPHVRHDKTIARLRDGP--ADLPARLSLFGHTRLACTDVQLLD 230 WQ LWR L +G P R D ARLR+ P +LP RLSLFG TRLA + ++ Sbjct 182 LWQAELWRRLRARIGGPAPAERLDSACARLREEPDLVELPGRLSLFGPTRLATDQLAVIA 241 Query 231 ALAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQ 290 ALAV+ D+HLWLPHPS LW +L+ A G+L R D + + H LL +L RDVREL+ Sbjct 242 ALAVNRDVHLWLPHPSPALWSSLST---AGGVLARADDRTALSVTHLLLSSLARDVRELE 298 Query 291 RALPAARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQ 350 L D PD+LLG LQAD+ + R S AD SVQVHACHGPARQ Sbjct 299 SRLTRLDVDDLHHPGPPPPDSLLGRLQADVRDD--RAPALSECTADASVQVHACHGPARQ 356 Query 351 IDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRL 410 ++VLRE LL L EDDPTL+PRD++VMCPD+++YAPLI A FG +V G HP HRLRVRL Sbjct 357 VEVLRECLLHLFEDDPTLEPRDVLVMCPDVESYAPLIRAAFG-QDVLG--HPGHRLRVRL 413 Query 411 ADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRE 470 ADRAL QTNP+L+V + LL +A+ R TASQ+L+L+ AAPVR +F F DDDL+ I W Sbjct 414 ADRALHQTNPVLAVVSSLLELADARVTASQILDLSAAAPVRRRFRFGDDDLERIREWATA 473 Query 471 SNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRV 530 + RWG P R +GL NT+ LDRIL G A E WL ALPLDDV SN + Sbjct 474 TGARWGIGPRQRAAFGLGDFPQNTFTTALDRILLGAAADESEGEWLALALPLDDVDSNDI 533 Query 531 ELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLT--ACNDGWQRAQVQREFAD 588 +L GRLAEFV+RL + GL+G + + AW AL +DLL + D WQ AQ +RE Sbjct 534 DLTGRLAEFVDRLDVALRGLAGPQSVAAWSSALTRALDLLVDVSAGDTWQLAQARRELGA 593 Query 589 VLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVG 648 + G +LRL DVRA+L +LAGRPTRANFRTG LTVCTMVPMRSVPHRVV L+G Sbjct 594 AMEHGGDT---VLRLSDVRAMLATRLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLLG 650 Query 649 LDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTG 708 LDD VFPR + DGDDVLAR P+ GERD RSEDRQLLLDA+ +A++ L++ YTGAD TG Sbjct 651 LDDEVFPRGASVDGDDVLARNPLIGERDPRSEDRQLLLDAVMSASEKLLLFYTGADPVTG 710 Query 709 QPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAAL 768 RPPA+PL+ELLDA+ T + I+ HPLQPFD +N P PF+FD AAL Sbjct 711 MSRPPAIPLSELLDAVAATAGSDALPAIVTRHPLQPFDARNFRP-----EHPFSFDRAAL 765 Query 769 AAAQAAAGKRCPPTAFISGRLPAPPAADVT-LADLLDFFKDPVKGFFRA-LDYTLPWDVD 826 A A+AA P AF+ L P DV LADL+ F P + F R L +P + + Sbjct 766 AGARAAQYPPEPEPAFLPAPLGPPQRGDVVDLADLVAFLVHPTQAFLRQRLGLRVPDEDE 825 Query 827 TVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRN 886 + D++ V D LA W +G+RML L G P D +EWRRGTLPP +LG +I Sbjct 826 DLADALDVAPDPLARWDLGQRMLVARLSGTEPADFRAAEWRRGTLPPFKLGESVLGDIER 885 Query 887 RARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPA 946 L A + + G + DVDV LG+GRRL+GTV V G + TYS+L PKH L A Sbjct 886 AVESLVAVSGSVHVGRAETVDVDVALGNGRRLTGTVGGVHGSVIANTTYSRLGPKHRLTA 945 Query 947 WIGLVTLAA--QEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRRE 1004 W L+ +AA ++ EW+A+ GR R P + L LV L DAG Sbjct 946 WAQLLAVAASDRDGDTEWTAVTTGRGSYSRPAWRSTLTAPENAAEELVRLVELRDAGLHA 1005 Query 1005 PLPLPLKTSCAWAQARRDG---QDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEV 1061 PLP+ S A+A+ R G +D AR+ W ++ F D +V P Sbjct 1006 PLPIATGASAAYAERRYGGSGMEDAIEAARKEWSSD-FGDARDRHITYVYGASP------ 1058 Query 1062 LLGKPRAGEEVAGEETRLGALAARLWLPLLAAE 1094 G +V G+ + A +LW PLL AE Sbjct 1059 -------GIDVLGDAVTIENYARQLWAPLLTAE 1084 >gi|229494271|ref|ZP_04388034.1| exodeoxyribonuclease V, gamma subunit [Rhodococcus erythropolis SK121] gi|229318633|gb|EEN84491.1| exodeoxyribonuclease V, gamma subunit [Rhodococcus erythropolis SK121] Length=1093 Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/1117 (47%), Positives = 656/1117 (59%), Gaps = 53/1117 (4%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLG-CGPGRA 61 L L+RAER+D L L LL P DPFA+E V V A+GVERWL+QRLS LG GP Sbjct 2 LKLYRAERSDTLVSALATLLRTPLSDPFARETVAVPAKGVERWLNQRLSSQLGTSGPSAV 61 Query 62 DGVCAGIAFRNPQSLIAE----ITG-TLDDDPWSPEALAWPLLAVIDASLDEPWCRTLAS 116 DG+ A IAF +P L+AE ++G T DDDPWSP L W +L VID SL EPWC LA Sbjct 62 DGISANIAFPSPARLVAESVAAVSGITADDDPWSPTRLVWTVLDVIDESLGEPWCGVLAK 121 Query 117 HL-GHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGE-----LPG 170 HL GH R GRR++ A + LF SYA QRP +L W G L + L Sbjct 122 HLEGH----------REGRRFASATHVTELFRSYAAQRPQMLIDWAAGRLTDGHGLALSE 171 Query 171 DLAWQPPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACTDVQL 228 D WQ LW + + P R + L + PA DLP RLS+FG TRL + Sbjct 172 DFEWQARLWCIVADKIDVPGPAERLGQVSRALVEDPALVDLPERLSVFGPTRLPVDQRMI 231 Query 229 LDALAVHHDLHLWLPHPSDELWRALAGF--QGADGLLPRRQDTSRRAAQHPLLETLGRDV 286 L AL+ + D+H+WLPHPS LW ++ ++ + R +D S + +PLL +L RDV Sbjct 232 LSALSANRDVHIWLPHPSPALWTKMSSRIPPRSESTIRRSEDGSALISANPLLSSLARDV 291 Query 287 RELQRALPAARATDEFLGATTKPDTLLGWLQAD-IAGNAPRPAGRSLSDADRSVQVHACH 345 RELQ +L AA L P +LL ++AD IA AP A ++ D +VQVHACH Sbjct 292 RELQISLGAAEFESVHLPEPAGPKSLLATVKADVIADRAPSVA----AEPDGTVQVHACH 347 Query 346 GPARQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHR 405 GPARQ++VLRE LL L EDDPTLQPRD++VMCPD++TYAPL+ A FG G V G HP H Sbjct 348 GPARQVEVLRECLLRLFEDDPTLQPRDVLVMCPDVETYAPLVRAAFGQG-VHG--HPGHL 404 Query 406 LRVRLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTIT 465 LRVRLADR L Q+NP+L+V LL +A+ RATAS++L+LA PVR +F + DD+L+ + Sbjct 405 LRVRLADRGLRQSNPVLAVLGSLLELADGRATASEVLDLAATEPVRTRFSWGDDELERLR 464 Query 466 TWVRESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDV 525 W E+ RWG R +GLD NT+ +DRIL GV+ E AWLD ALPLDDV Sbjct 465 EWTTEAGARWGIGSRQRATFGLDAFPQNTFNTAMDRILLGVSADESENAWLDLALPLDDV 524 Query 526 GSNRVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLT--ACNDGWQRAQVQ 583 ++L GR AEFV+RL + L+G WL L +DLLT A D WQ A Sbjct 525 DGTDIDLTGRFAEFVDRLAVSLRDLAGPHSPAEWLRVLMRALDLLTDTAPADSWQSAGAH 584 Query 584 REFADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRV 643 RE + G +LRL DVRA+L LAGRPTRANFRTG LTVCTMVPMRSVPHRV Sbjct 585 RELVAAVEFGGET---VLRLADVRAMLSRSLAGRPTRANFRTGELTVCTMVPMRSVPHRV 641 Query 644 VCLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGA 703 V L+GLDD VFPR DGDD+L+R+P+ GERD+RSEDRQLLLDA+ +A + L++ YTGA Sbjct 642 VVLIGLDDEVFPRTGGVDGDDILSRDPVVGERDLRSEDRQLLLDAVMSAGEHLILLYTGA 701 Query 704 DERTGQPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTF 763 D TG RPPA+PL+ LLD L T +L HPLQ FD +N P KPF+F Sbjct 702 DPVTGVVRPPAIPLSGLLDVLSATVGPDAVNGVLTRHPLQSFDNRNFAP-----HKPFSF 756 Query 764 DPAALAAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRA-LDYTLP 822 D AALA A+AAAG +S L +V LADL++F P +GF R L +P Sbjct 757 DTAALAGARAAAGTPIELPTVLSAELLEVHPKEVNLADLVNFLVHPARGFLRQRLGVRVP 816 Query 823 WDVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAK 882 D + DS+ ++D L+ W +G+RML L G D +EWRRGTLPP LG Sbjct 817 ELDDDIADSLATELDPLSTWALGDRMLLSRLAGRSSADFRAAEWRRGTLPPYNLGATVLG 876 Query 883 EIRNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKH 942 + +A AL H DG +A DVD+DLGDG RL+GTVT V G V +YS LAPKH Sbjct 877 NVEWVVDQIAGLALPHFDGDSEAVDVDIDLGDGHRLTGTVTGVHGNSVVRASYSSLAPKH 936 Query 943 VLPAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGR 1002 + AWI L+ L A A+ IGR + + AR + P + V +L++LV L + G Sbjct 937 RMTAWINLLALKAHGRPGPLDAVSIGRGRGKTAAARSVLDAPGNAVEILQQLVDLRERGL 996 Query 1003 REPLPLPLKTSCAWAQARRDGQ---DPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPF 1059 + PLP+ TS +A+ R G+ D A W T ++ G+ P++ +G Sbjct 997 QRPLPMWAATSAEYARRRFGGESVDDATNGADTQW-TGQY--GEMIDPSNTYVFGEARTL 1053 Query 1060 EVLLGKPRAGEEV--AGEETRLGALAARLWLPLLAAE 1094 L P + +E A E TR G LA RLW PLL E Sbjct 1054 AELAADPPSDDEFVWAEEPTRFGVLARRLWDPLLTNE 1090 >gi|312139062|ref|YP_004006398.1| exodeoxyribonuclease v gamma subunit recc [Rhodococcus equi 103S] gi|311888401|emb|CBH47713.1| exodeoxyribonuclease V gamma subunit RecC [Rhodococcus equi 103S] Length=1085 Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/1114 (48%), Positives = 653/1114 (59%), Gaps = 57/1114 (5%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRAD 62 L LHRAE LA L +L P DPF +E++ V A+GVERWL+QRLS VLG G D Sbjct 2 LTLHRAESAGTLASALAQVLVTPLADPFEREVIAVPAKGVERWLTQRLSHVLGAGDSGHD 61 Query 63 GVCAGIAFRNPQSLI----AEITGT-LDDDPWSPEALAWPLLAVIDASLDEPWCRTLASH 117 GV A I F +P LI A TG +DDDPW P + W LL VID L EPWC LA H Sbjct 62 GVAANIDFPSPNRLIDQALAAATGYDVDDDPWHPSRMLWTLLQVIDDCLAEPWCTVLARH 121 Query 118 LGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDG----DLGELPGDLA 173 LGH A + R GRRY A LA LF +Y QRP +L W G L DL Sbjct 122 LGHGAD-----DHRAGRRYGTAAHLAELFRAYGSQRPAMLVDWAAGRDTDGFAPLDADLC 176 Query 174 WQPPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACTDVQLLDA 231 WQ LWR L +G+ P R D ARLRD PA +LP RLSLFG TRL + +L A Sbjct 177 WQAQLWRRLRERIGSPSPAERLDAACARLRDEPALLELPERLSLFGPTRLGADQIAVLSA 236 Query 232 LAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRA--AQHPLLETLGRDVREL 289 L + D+H+W+PHPS E+W LA D PRR+ RA HPLL +L RDVREL Sbjct 237 LGANRDVHVWIPHPSIEMWGELA-----DSEPPRRRADDVRALDVAHPLLASLARDVREL 291 Query 290 QRALPAARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPAR 349 Q L A D ++P TLLG LQ+DIA + +P+ + D +V++H+CHGPAR Sbjct 292 QSRLGAIGMVDVHHPGPSRPATLLGQLQSDIAADR-QPSSWPVDD---TVEIHSCHGPAR 347 Query 350 QIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVR 409 Q++ LRE LL L ++DPTL+PRD+VVMCPD++TYAPL+ A FG G HP HRLRVR Sbjct 348 QVEALRERLLHLFQNDPTLEPRDVVVMCPDVETYAPLVRAAFGQGVQGPLTHPGHRLRVR 407 Query 410 LADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVR 469 LADRAL QTNP+L V A LL +A++R T SQ+L+LA APVR +F F DD+L+ + W Sbjct 408 LADRALHQTNPVLGVVATLLDLADSRVTVSQVLDLAATAPVRRRFRFDDDNLERMREWTV 467 Query 470 ESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNR 529 + RWG R +GL NT + LDRIL G A + WL ALPLDDV SN Sbjct 468 AAGARWGIGRRERGAFGLGDFEQNTLKAALDRILLGAAADDADGEWLSLALPLDDVESND 527 Query 530 VELAGRLAEFVERLHHVVGGLSGARPLVAW----LDALATGIDLLTACNDGWQRAQVQRE 585 ++L GRLAE+V+RL + GL+G + W AL +D+ A D WQ Q +RE Sbjct 528 IDLTGRLAEYVDRLDVSLRGLTGPQSAEQWSAALARALDLLVDVTEA--DAWQLGQARRE 585 Query 586 FADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVC 645 A + G LLRL DVRA+L ++LAGRPTRANFRTG LTVCTMVPMRSVPHRVV Sbjct 586 LAAAVEHGGD---TLLRLADVRAMLRSRLAGRPTRANFRTGELTVCTMVPMRSVPHRVVV 642 Query 646 LVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADE 705 L+GLDD VFPR + DGDDVLAR+P+ GERD RSEDRQLLLDAI +A++ L++ YTGAD Sbjct 643 LLGLDDDVFPRGTGIDGDDVLARDPLLGERDPRSEDRQLLLDAIMSASERLLLFYTGADP 702 Query 706 RTGQPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDP 765 G RPPAVPLAEL D L A V +R HPLQPFD +N P P +FD Sbjct 703 VNGTARPPAVPLAELRDVLAAMAGADVVQR----HPLQPFDPRNFDP-----VGPRSFDH 753 Query 766 AALAAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRA-LDYTLPWD 824 AAL A+AA P AF+ LP DV LA+L+ F ++P++GF R L + +P Sbjct 754 AALGGARAAQQPSVPAPAFLPEPLPPIEPGDVDLAELIAFLENPIQGFLRQRLGFRVPDL 813 Query 825 VDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEI 884 + V D++ +++D LA W +GERML L G P +EWRRGTLPP RLG +I Sbjct 814 DEDVADTLDLELDPLARWGIGERMLGARLAGADPAAFRAAEWRRGTLPPARLGDAALSDI 873 Query 885 RNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVL 944 LA A+ G +A D+DVDLG GRRL GTV V G T+S+LAPKH + Sbjct 874 EWTVDSLARASAPVHAGPSEAVDIDVDLG-GRRLVGTVDGVHGEVIARTTFSRLAPKHRI 932 Query 945 PAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRRE 1004 AW+ L+ + A +A+ GR RN + R V P + +L LV + D G E Sbjct 933 GAWVRLLAVTATGRSGNLTAVTTGRGSGRNPVMRSTLVAPENAAEILTRLVEMRDRGLVE 992 Query 1005 PLPLPLKTSCAWAQARRDGQD---PYPPARECWQTNRFRPGDDDAPAHVR-AWGPRAPFE 1060 PLP+ +S A+A R G+ A W T F G D HVR GP A Sbjct 993 PLPMTAASSAAYADQRFRGRSIELALVAAERAW-TGDFGDGKD---RHVRFVHGPDAELA 1048 Query 1061 VLLGKPRAGEEVAGEETRLGALAARLWLPLLAAE 1094 VL KP A E + G AA LW LLAAE Sbjct 1049 VLTAKP--APPGAYEPSCFGTEAAVLWGSLLAAE 1080 >gi|226304346|ref|YP_002764304.1| exodeoxyribonuclease V gamma chain [Rhodococcus erythropolis PR4] gi|226183461|dbj|BAH31565.1| exodeoxyribonuclease V gamma chain [Rhodococcus erythropolis PR4] Length=1093 Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/1117 (47%), Positives = 656/1117 (59%), Gaps = 53/1117 (4%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLG-CGPGRA 61 L L+RAER+D L L LL P DPFA+E V V A+GVERWL+QRLS LG GP Sbjct 2 LKLYRAERSDTLVSALATLLRTPLSDPFARETVAVPAKGVERWLNQRLSSQLGTSGPSAV 61 Query 62 DGVCAGIAFRNPQSLIAE----ITG-TLDDDPWSPEALAWPLLAVIDASLDEPWCRTLAS 116 DG+ A IAF +P L+AE ++G T DDDPWSP L W +L VID SL EPWC LA Sbjct 62 DGISANIAFPSPARLVAESVAAVSGITADDDPWSPTRLVWTVLDVIDESLGEPWCGVLAK 121 Query 117 HL-GHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGE-----LPG 170 HL GH R GRR++ A + LF SYA QRP +L W G L + L Sbjct 122 HLEGH----------REGRRFASATHVTELFRSYAAQRPQMLIDWAAGRLTDGHGLALSE 171 Query 171 DLAWQPPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACTDVQL 228 D WQ LW + + P R + L + PA DLP RLS+FG TRL + Sbjct 172 DFEWQARLWCIVADKIDVPGPAERLGQVSRALVEDPALVDLPERLSVFGPTRLPVDQRMI 231 Query 229 LDALAVHHDLHLWLPHPSDELWRALAGF--QGADGLLPRRQDTSRRAAQHPLLETLGRDV 286 L AL+ + D+H+WLPHPS LW ++ ++ + R +D S + +PLL +L RDV Sbjct 232 LSALSANRDVHIWLPHPSPALWTKMSSRIPPRSESTIRRSEDGSALISANPLLSSLARDV 291 Query 287 RELQRALPAARATDEFLGATTKPDTLLGWLQAD-IAGNAPRPAGRSLSDADRSVQVHACH 345 RELQ +L AA L P +LL ++AD IA AP A ++ D +VQVHACH Sbjct 292 RELQISLGAAEFESVHLPEPAGPKSLLATVKADVIADRAPSVA----AEPDGTVQVHACH 347 Query 346 GPARQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHR 405 GPARQ++VLRE LL L EDDPTLQPRD++VMCPD++TYAPL+ A FG G V G HP H Sbjct 348 GPARQVEVLRECLLRLFEDDPTLQPRDVLVMCPDVETYAPLVRAAFGQG-VHG--HPGHL 404 Query 406 LRVRLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTIT 465 LRVRLADR L QTNP+L+V LL +A+ RATAS++L+LA A PVR +F + +D+L+ + Sbjct 405 LRVRLADRGLRQTNPVLAVLGSLLELADGRATASEVLDLAAADPVRTRFSWGEDELERLR 464 Query 466 TWVRESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDV 525 W E+ RWG R +GLD NT+ +DRIL GV+ E AWLD ALPLDDV Sbjct 465 EWTTEAGARWGIGSRQRATFGLDAFPQNTFNTAMDRILLGVSADESENAWLDLALPLDDV 524 Query 526 GSNRVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLT--ACNDGWQRAQVQ 583 ++L GR AEFV+RL + L+G WL L +DLLT A D WQ A Sbjct 525 DGTDIDLTGRFAEFVDRLAVSLRDLAGPHSPAEWLRVLMRALDLLTDTAPADSWQSAGAH 584 Query 584 REFADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRV 643 RE + G +LRL DVRA+L LAGRPTRANFRTG LTVCTMVPMRSVPHRV Sbjct 585 RELVAAVEFGGET---MLRLADVRAMLSRSLAGRPTRANFRTGELTVCTMVPMRSVPHRV 641 Query 644 VCLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGA 703 V L+GLDD VFPR DGDD+L+R P+ GERD+RSEDRQLLLDA+ +A + L++ YTGA Sbjct 642 VVLIGLDDEVFPRTGGVDGDDILSRHPVVGERDLRSEDRQLLLDAVMSAGEHLILLYTGA 701 Query 704 DERTGQPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTF 763 D TG RPPA+PL+ LLD L T +L HPLQ FD +N +P +PF+F Sbjct 702 DPVTGVVRPPAIPLSGLLDVLSATVGPEAINGVLTRHPLQSFDNRNFSPD-----QPFSF 756 Query 764 DPAALAAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRA-LDYTLP 822 D AALA A+AAAG +S L +V LADL++F P +GF R L +P Sbjct 757 DTAALAGARAAAGTPIELPTVLSAELLEVHPKEVNLADLVNFLVHPARGFLRQRLGVRVP 816 Query 823 WDVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAK 882 D + DS+ ++D L+ W +G+RML L G D +EWRRGTLPP LG Sbjct 817 ELDDDIADSLATELDPLSTWALGDRMLLSRLAGRSSADFRAAEWRRGTLPPYNLGASVLG 876 Query 883 EIRNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKH 942 + LA AL H +G +A DVD+DLGDG RL+GTVT V G V +YS LAPKH Sbjct 877 NVEWVVDQLAGLALPHLEGDSEAVDVDIDLGDGHRLTGTVTGVHGNSVVRASYSSLAPKH 936 Query 943 VLPAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGR 1002 + AWI L+ L A A+ IGR + + AR + P + +L++LV L + G Sbjct 937 RMTAWINLLALKAHGRPGALDAVSIGRGRGKIAAARSVLDAPGNAAEILQQLVDLRERGL 996 Query 1003 REPLPLPLKTSCAWAQARRDGQ---DPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPF 1059 + PLP+ TS +A+ R G+ D A W T ++ G+ P++ +G Sbjct 997 QRPLPMWAATSAEYARRRFGGESVDDATNGADTQW-TGQY--GEMIDPSNAYVFGEARTL 1053 Query 1060 EVLLGKPRAGEEV--AGEETRLGALAARLWLPLLAAE 1094 L P + +E A E TR G LA RLW PLL E Sbjct 1054 AELAADPPSDDEFVWAEEPTRFGVLARRLWDPLLTNE 1090 >gi|325673660|ref|ZP_08153351.1| exodeoxyribonuclease V gamma subunit [Rhodococcus equi ATCC 33707] gi|325555681|gb|EGD25352.1| exodeoxyribonuclease V gamma subunit [Rhodococcus equi ATCC 33707] Length=1085 Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/1114 (48%), Positives = 651/1114 (59%), Gaps = 57/1114 (5%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRAD 62 L LHRAE LA LG +L P DPF +E++ V A+GVERWL+QRLS VLG G D Sbjct 2 LTLHRAESAGTLASALGQVLVTPLADPFEREVIAVPAKGVERWLTQRLSHVLGAGDSGHD 61 Query 63 GVCAGIAFRNPQSLI----AEITGT-LDDDPWSPEALAWPLLAVIDASLDEPWCRTLASH 117 GV A I F +P LI A TG +DDDPW P + W LL VID L EPWC LA H Sbjct 62 GVAANIDFPSPNRLIDQALAAATGYDVDDDPWHPSRMLWTLLQVIDDCLAEPWCTVLARH 121 Query 118 LGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDG----DLGELPGDLA 173 LGH A + R GRRY A LA LF +Y QRP +L W G L DL Sbjct 122 LGHGAD-----DHRAGRRYGTAAHLAELFRAYGSQRPAMLVDWAAGRDTDGTSPLDADLC 176 Query 174 WQPPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACTDVQLLDA 231 WQ LWR L +G+ P R D ARLRD PA +LP RLSLFG TRL + +L A Sbjct 177 WQAQLWRRLRERIGSPSPAERLDAACARLRDEPALLELPERLSLFGPTRLGADQIAVLSA 236 Query 232 LAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRA--AQHPLLETLGRDVREL 289 L + D+H+W+PHPS E+W LA D PRR+ RA HPLL +L RDVREL Sbjct 237 LGANRDVHVWIPHPSIEMWGELA-----DSEPPRRRADDVRALDVAHPLLASLARDVREL 291 Query 290 QRALPAARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPAR 349 Q L A D ++P TLLG LQ+DIA + +P+ + D +V++H+CHGPAR Sbjct 292 QSRLGAIGMVDVHHPGPSRPATLLGQLQSDIAADR-QPSSWPVDD---TVEIHSCHGPAR 347 Query 350 QIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVR 409 Q++ LRE LL L + DPTL+PRD+VVMCPD++TYAPL+ A FG G HP HRLRVR Sbjct 348 QVEALRERLLHLFQKDPTLEPRDVVVMCPDVETYAPLVRAAFGQGVQGPLTHPGHRLRVR 407 Query 410 LADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVR 469 LADRAL QTNP+L V A LL +A++R T SQ+L+LA APVR +F F DD+L+ + W Sbjct 408 LADRALHQTNPVLGVVAALLDLADSRVTVSQVLDLAATAPVRRRFRFDDDNLERMREWTV 467 Query 470 ESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNR 529 + RWG R +GL NT + LDRIL G A + WL ALPLDDV SN Sbjct 468 AAGARWGIGRRERGAFGLGDFEQNTLKSALDRILLGAAADDADGEWLSLALPLDDVESND 527 Query 530 VELAGRLAEFVERLHHVVGGLSGARPLVAW----LDALATGIDLLTACNDGWQRAQVQRE 585 ++L GRLAE+V+RL + GL+G + W AL +D+ A D WQ Q +RE Sbjct 528 IDLTGRLAEYVDRLDVSLRGLTGPQSAEQWSAALARALDLLVDVAEA--DAWQLGQARRE 585 Query 586 FADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVC 645 A + G LLRL DVRA+L ++LAGRPTRANFRTG LTVCTMVPMRSVPHRVV Sbjct 586 LAAAVEHGGD---TLLRLADVRAMLRSRLAGRPTRANFRTGELTVCTMVPMRSVPHRVVV 642 Query 646 LVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADE 705 L+GLDD VFPR + DGDDVLAR+P+ GERD RSEDRQLLLDAI +A++ L++ YTGAD Sbjct 643 LLGLDDDVFPRGTGIDGDDVLARDPLLGERDPRSEDRQLLLDAIMSASERLLLFYTGADP 702 Query 706 RTGQPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDP 765 G RPPAVPLAEL D L A V +R HPLQPFD +N P P +FD Sbjct 703 VNGTARPPAVPLAELRDVLAAMAGADVVQR----HPLQPFDPRNFDP-----VGPRSFDH 753 Query 766 AALAAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRA-LDYTLPWD 824 AAL A+AA AF+ LP DV LA+L+ F ++P++GF R L + +P Sbjct 754 AALGGARAAQQPSVQAPAFLPEPLPPIEPGDVDLAELISFLENPIQGFLRQRLGFRVPDL 813 Query 825 VDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEI 884 + V D++ +++D LA W +GERML L G P +EWRRGTLPP RLG +I Sbjct 814 DEDVADTLDLELDPLARWGIGERMLGARLAGADPAAFRAAEWRRGTLPPARLGDAALSDI 873 Query 885 RNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVL 944 LA A+ G +A D+DVDLG GRRL GTV V G T+S+LAPKH + Sbjct 874 EWTVDSLARASAPVHAGPSEAVDIDVDLG-GRRLVGTVDGVHGEVIARTTFSRLAPKHRI 932 Query 945 PAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRRE 1004 AW+ L+ + A +A+ GR R + R V P + +L LV + D G E Sbjct 933 GAWVRLLAVTATGRPGNLTAVTTGRGSGRTPVMRSTLVAPENAAEILTRLVEMRDRGLAE 992 Query 1005 PLPLPLKTSCAWAQARRDGQD---PYPPARECWQTNRFRPGDDDAPAHVR-AWGPRAPFE 1060 PLP+ +S A+A R G+ A W T F G D HVR GP A Sbjct 993 PLPMTAASSAAYADQRFRGRSIELALVAAERAW-TGDFGDGKD---RHVRYVHGPDAELS 1048 Query 1061 VLLGKPRAGEEVAGEETRLGALAARLWLPLLAAE 1094 VL KP A E + G AA LW LLAAE Sbjct 1049 VLTDKP--APPGAYEPSCFGTEAAVLWGSLLAAE 1080 >gi|331697794|ref|YP_004334033.1| exodeoxyribonuclease V subunit gamma [Pseudonocardia dioxanivorans CB1190] gi|326952483|gb|AEA26180.1| exodeoxyribonuclease V, gamma subunit [Pseudonocardia dioxanivorans CB1190] Length=1124 Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust. Identities = 556/1130 (50%), Positives = 666/1130 (59%), Gaps = 53/1130 (4%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRAD 62 LH+HRAER D LAD L +LA DPFA E+V V RGVERWL+QRL+ LG GRAD Sbjct 5 LHVHRAERADTLADALAGVLAQVLADPFAAEVVAVPERGVERWLAQRLAHRLGTRDGRAD 64 Query 63 GVCAGIAFRNPQSLIAEITGTLD-----DDPWSPEALAWPLLAVIDASLDEPWCRTLASH 117 GVCA + F +P ++ E+ DDPW P WPLL ++D + EP L +H Sbjct 65 GVCANVRFPSPAEVVDEVVCAATGVDPADDPWRPARAVWPLLELVDEAAAEPGFALLGAH 124 Query 118 LGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGE------LPGD 171 LG TD+ RRGRRY++ARRLA L+ASYA RPG+L WL G + L D Sbjct 125 LG----TDSADAHRRGRRYALARRLAELYASYAAHRPGMLGEWLAGADVDAAGGAALAPD 180 Query 172 LAWQPPLWRALVTTVGADPPHVRHDKTIARLRDGP--ADLPARLSLFGHTRLACTDVQLL 229 L WQ LWR L +G P R + A LR P A L RLS+FG TRLA + + +L Sbjct 181 LRWQAELWRRLRARIGVPGPAERVETACALLRADPGRAALGPRLSVFGPTRLAASRLTVL 240 Query 230 DALAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQ-HPLLETLGRDVRE 288 ALAVH D+HLWL HPS LW AL G PRR D + A +PLL +LGRDVRE Sbjct 241 AALAVHRDVHLWLAHPSPVLWAALTPQAGT---APRRADDASAAVVANPLLASLGRDVRE 297 Query 289 LQRALPAARATDEFLGATTKPDTLLGWLQADIAGN-APRPAGRSLSDADRSVQVHACHGP 347 LQ LP TD P TLLG LQ + + AP L ADRSVQVHACHGP Sbjct 298 LQLRLPVG--TDVHHPGPPPPPTLLGALQCALRDDVAPGAVPTVLDPADRSVQVHACHGP 355 Query 348 ARQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGD--CHPAHR 405 RQ++VLREV+LGLL DPTL+PRD+VVMCPDI+T+APLI A FGL D HP HR Sbjct 356 DRQVEVLREVVLGLLAADPTLEPRDVVVMCPDIETFAPLISATFGLAAGTDDDTGHPGHR 415 Query 406 LRVRLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTIT 465 L VRLADRAL Q NPLL A LL +A+ R TA+Q+L+LA PVR +F F DD LD + Sbjct 416 LPVRLADRALRQVNPLLDTVATLLELADARLTATQVLDLAATEPVRRRFRFDDDALDRLR 475 Query 466 TWVRESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDV 525 V S +RWG D HR + L NTW GLDR+L GVAM E + WL TALPLDDV Sbjct 476 DLVVGSGVRWGLDADHRGPFALGAFAQNTWSAGLDRMLLGVAMDEADRQWLGTALPLDDV 535 Query 526 GSNRVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACN--DGWQRAQVQ 583 GS+ V+ GR AE ++RL V+ GL G R L W ALA G+D LT D WQ AQ + Sbjct 536 GSSDVDTVGRFAELLDRLAAVLAGLRGERTLAEWGAALAAGLDALTTTTPTDAWQAAQAR 595 Query 584 REFADVLARAGSRAAPL-LRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHR 642 E A+V A AG AA + L LPDVR LL +L GRPTRANFRTGTLTV T+VPMRSVPHR Sbjct 596 AELAEVTASAGPHAASVPLGLPDVRGLLADRLRGRPTRANFRTGTLTVATLVPMRSVPHR 655 Query 643 VVCLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTG 702 VVCL+GLDDG FPR PDGDD LAR+P GERD RSEDRQLLLDA+GAAT+ LV+ ++G Sbjct 656 VVCLLGLDDGAFPRAGEPDGDDALARDPRVGERDPRSEDRQLLLDAVGAATEHLVVVHSG 715 Query 703 ADERTGQPRPPAVPLAELLDALDQTTSAP----VRERILVTHPLQPFDRKNVTPGALLGA 758 ADERTG RPP+VP+ ELLDALD P R+ ++V HPLQPFD +N L G Sbjct 716 ADERTGVRRPPSVPVGELLDALDAVAVGPDGRRARDHVVVRHPLQPFDTRNFAAAVLGGP 775 Query 759 KPFTFDPAALAAAQAAAGKRC-PPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRA- 816 PF+FD AALA A+AA G R PP PP A+V L DL+ F + P K F R Sbjct 776 GPFSFDRAALAGARAATGVRTPPPRPLPGPLPVLPPPAEVELDDLVRFLEGPAKAFLRQR 835 Query 817 LDYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRL 876 + +L D +D++PV++D L W +G R+L D L G D +EWRRG LPPG L Sbjct 836 VGVSLFSADDDPDDALPVELDQLQRWHIGARLLADRLAGHDLDACRAAEWRRGALPPGGL 895 Query 877 GVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVDLG-------DGRRLSGTVTPVFGGR 929 G R E+ + AA L R ++ DV + G + P G Sbjct 896 GRRILDEVAADVEPIVAATLPLRSAPPESLDVSAVVAGTRVVGTVGGVVRVGSGPGATGD 955 Query 930 TVSVTYSKLAPKHVLPAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVA 989 VS +S+L K + AW+ L+ L A P W A+ IGR + V P Sbjct 956 IVSAGFSRLGAKQRVGAWVRLLALTAARPDTTWRAVTIGRGSDGPERSVLGPVEPGRAAV 1015 Query 990 VLRELVLLYDAGRREPLPLPLKTSCAWAQAR----RDGQDPYPPARECWQTNRFRPGDDD 1045 VL +L+ L+ G LPL LK S A+A R R +D AR W RF P + D Sbjct 1016 VLADLLALHRDGLCAALPLVLKASHAYAGRRRLRNRTVEDAVDAARSAW-AGRFSP-ERD 1073 Query 1046 APAHVRAWGPRAPFEVLLGKP-RAGEEVAGEETRLGALAARLWLPLLAAE 1094 PAH WGP AP E LL P R GE E + G LA R+W PLLAAE Sbjct 1074 EPAHRLLWGPSAPLEDLLSAPARTGE----EPSLFGELAMRVWTPLLAAE 1119 >gi|333920628|ref|YP_004494209.1| exodeoxyribonuclease V subunit gamma [Amycolicicoccus subflavus DQS3-9A1] gi|333482849|gb|AEF41409.1| Exodeoxyribonuclease V gamma chain [Amycolicicoccus subflavus DQS3-9A1] Length=1095 Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/1116 (45%), Positives = 642/1116 (58%), Gaps = 45/1116 (4%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCG--PGR 60 L LHRA LA L L P DPFA E++ V A+GVERWL QRLS VLG G P R Sbjct 2 LKLHRAGSAAQLATELARHLGRPLADPFAAEVISVPAKGVERWLCQRLSTVLGAGGGPDR 61 Query 61 ADGVCAGIAFRNPQSL----IAEITGTL-DDDPWSPEALAWPLLAVIDASLDEPWCRTLA 115 ADG+ A I F P + IA +G + DDDPW+ E + W LL V+DAS+ +PWC LA Sbjct 62 ADGIAANIEFPAPARVVDEAIAAASGVMADDDPWANERVVWHLLDVLDASVGQPWCTVLA 121 Query 116 SHLGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAW-----LDGDLGELPG 170 H GH D + R GRRY+ A L GLF Y+ +RP ++ W DG + Sbjct 122 RHFGHH--PDGRHDFRVGRRYATAAHLTGLFRRYSTERPDMIVDWAVGRRTDGAGSPIDA 179 Query 171 DLAWQPPLWRALVTTVGADPPHVRHDKTIARLRDGP--ADLPARLSLFGHTRLACTDVQL 228 DL WQP LW+ L +G P R + AR+RD P LP RLS FG TRL +++ Sbjct 180 DLDWQPQLWQELRKHIGHPSPAERLAEVCARIRDTPECVPLPERLSFFGPTRLTTEQLRI 239 Query 229 LDALAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRE 288 + AL+ +H+W+PHPS LW+ L +GA R DTS ++PLL +L RDVRE Sbjct 240 IKALSAGRAVHVWIPHPSPALWKHL---RGAPQRARRATDTSVLGIRNPLLASLSRDVRE 296 Query 289 LQRALPAARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPA 348 LQ + + P T L LQA I + P PA L+ D S+++H+CHG A Sbjct 297 LQLRIEPLCDEVAHYEDSGAPGTTLRRLQAGIQDDEP-PA--PLAHVDPSIEIHSCHGVA 353 Query 349 RQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRV 408 RQ++VLRE LL L D P L+PRD++VMCPD++T+AP I A FG ++A HP +LRV Sbjct 354 RQVEVLRECLLHLFSDMPDLEPRDVLVMCPDVETFAPHIRAVFG-QDIA--THPGQQLRV 410 Query 409 RLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWV 468 RLADR L QTNPLL+V A LL +A +R TAS++L+ A PVR FGF D+D++ + W Sbjct 411 RLADRNLRQTNPLLNVVAALLELAASRVTASEMLDFAANGPVRRAFGFKDEDIERLREWT 470 Query 469 RESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSN 528 S RWG R R+ L NT+ GLDRIL GVA E AW+D ALPLDD+GS Sbjct 471 VASGARWGLGDQQRARFRLGGFPQNTFATGLDRILLGVAADESGLAWIDKALPLDDIGSG 530 Query 529 RVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTAC--NDGWQRAQVQREF 586 ++LAGR AE +RL V+ L G + W L +D+LT + WQ + + Sbjct 531 DIDLAGRFAELTDRLDTVLRSLQGLKSARQWTHDLVDALDILTEVPAGEAWQLGEARSAL 590 Query 587 ADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCL 646 D +GS LRLPDVR LL+ LAGRPTRANFRTG LTVCTMVPMRSVPHRVV L Sbjct 591 GDATQHSGSAE---LRLPDVRVLLERLLAGRPTRANFRTGELTVCTMVPMRSVPHRVVIL 647 Query 647 VGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADER 706 +GLDD +FPR + DGDDVL+REP GERD RSEDRQLLLDA+ AA + L++ +TG D Sbjct 648 LGLDDDMFPRGAGIDGDDVLSREPCIGERDARSEDRQLLLDALMAAQERLLLFFTGCDPV 707 Query 707 TGQPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPA 766 TG RPPAVPL E++DA+ +A + THPLQPFD +N P A+P ++D Sbjct 708 TGNRRPPAVPLGEVVDAV----TALAGSNPVTTHPLQPFDVRNFDP-----AEPHSYDVN 758 Query 767 ALAAAQAAAGKRCPPTAFISGRLP--APPAADVTLADLLDFFKDPVKGFFRA-LDYTLPW 823 ALA A+A+ P F+ LP A A L+DL++F PV+ F R L LP Sbjct 759 ALAGARASQQPPKPARPFLDSPLPRAAENTAITDLSDLVNFMAHPVQAFLRQRLGVVLPS 818 Query 824 DVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKE 883 D ++D+ ++D L +W +G+RML +L G DD ++E RRGTLPP LG + + Sbjct 819 AEDEIDDAFSAELDNLVKWNIGDRMLNAVLSGHSIDDFRNAELRRGTLPPFALGTQILDD 878 Query 884 IRNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHV 943 I L+AA+ + G Q D+D+DLG GRR++G+V+ V G YSKL PKH Sbjct 879 ISTTVDILSAASHSFHSGQPQTFDIDIDLGQGRRVTGSVSGVHGETLARTIYSKLGPKHR 938 Query 944 LPAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRR 1003 L AW+ LV L+ + G +W A+ GR + + R + P DP++V+R+LV L + G Sbjct 939 LHAWVQLVALSCMQRG-DWRAVTTGRGQGQRPAWRSVICAPEDPISVMRKLVELRERGLT 997 Query 1004 EPLPLPLKTSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLL 1063 PLP+ S +A R G+ P + R GD + +GP A L Sbjct 998 APLPIAQNASAEYANRRHSGRSPDEALEAASKAFDGRFGDGTDEHYSFVYGPGAQLASLA 1057 Query 1064 GKPRAGEEV--AGEETRLGALAARLWLPLLAAEGSV 1097 +E + + TR G LA RLW PLL E V Sbjct 1058 SAAPETDEAPWSDDPTRFGVLACRLWFPLLDHESQV 1093 >gi|334336343|ref|YP_004541495.1| exodeoxyribonuclease V, gamma subunit [Isoptericola variabilis 225] gi|334106711|gb|AEG43601.1| exodeoxyribonuclease V, gamma subunit [Isoptericola variabilis 225] Length=1137 Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/1145 (46%), Positives = 666/1145 (59%), Gaps = 61/1145 (5%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRAD 62 LH+HR+ER D L L A+LA P DPF ++V V RGVERWL+QRL+ LG GP Sbjct 2 LHVHRSERADALVAPLAAVLAPPPSDPFTPDVVAVPTRGVERWLAQRLAHHLGTGPDGEA 61 Query 63 GVCAGIAFRNPQSLIAEITGTL-----DDDPWSPEALAWPLLAVIDASLDEPWCRTLASH 117 GVCA + F +P L+A++ L + DPW E L W +L V+D ++ E W LA + Sbjct 62 GVCANVEFASPARLVADVVARLGGHDAESDPWQAERLTWTVLEVLDDAVGEAWAAPLARY 121 Query 118 LGHFATTDAEA-ELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLG---------- 166 LG + A + RRGRR VARRLA LF SYA QRP ++AAW Sbjct 122 LGADDVAEGTAGDARRGRRLGVARRLARLFTSYAAQRPDMVAAWAGESAAGTPDVPTDVP 181 Query 167 -ELPGDLAWQPPLWRALVTTVGADPPHVRHDKTIARLRDGP--ADLPARLSLFGHTRLAC 223 ++P DLAWQ LWR + VG P R + + + P DLP R+S+FG TRL Sbjct 182 TDVPTDLAWQVELWRRVRERVGEPGPAERLAGVVRAVVERPDEVDLPERVSVFGPTRLPE 241 Query 224 TDVQLLDALAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLG 283 +++L AL H D+HLWLPHPS LW +A A + +R HP+L ++ Sbjct 242 DQLRVLHALGAHRDVHLWLPHPSPALWDRVAAAGPAAARRREQVVHAR----HPVLASMA 297 Query 284 RDVRELQR-----ALPAARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRS 338 RD ELQ A+ A P TLLG LQ + + L ADRS Sbjct 298 RDATELQVRLARLAVGGEAHAHAHHPAPEPPSTLLGELQRRLRADDAASPPAELDPADRS 357 Query 339 VQVHACHGPARQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG 398 V+VHACHG ARQ++VLR+VL GLL DDPTL+PRD+VVMCPD++ APL+ A FGL + G Sbjct 358 VEVHACHGLARQVEVLRDVLAGLLADDPTLEPRDVVVMCPDVEAVAPLVAATFGLADGDG 417 Query 399 DC----HPAHRLRVRLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKF 454 D HP LRVR+ADR+ Q NP+L + A LL +A+ R TAS++L+LA + PVR +F Sbjct 418 DAAGAAHPGQALRVRVADRSPRQVNPVLMLLATLLDLADGRVTASEVLDLAASEPVRRRF 477 Query 455 GFADDDLDTITTWVRESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQA 514 +DDDL + W E+ + WG D + R R+GL V TW LDRIL G AM+E+ Sbjct 478 RLSDDDLARVRDWAVEAGVHWGEDASRRARFGLPAVRQGTWDTALDRILLGAAMAEEDHR 537 Query 515 WLDTALPLDDVGSNRVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLT--A 572 ++ +ALPLDDV S V+LAGRLAE ++RL V+ L GARP AWLDAL I LL A Sbjct 538 YVSSALPLDDVDSTDVDLAGRLAELLDRLRTVLADLDGARPRDAWLDALDRAITLLADAA 597 Query 573 CNDGWQRAQVQREFADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCT 632 + WQ +Q +R ADV A LLRLPDVRALL +L GRPTRA FRTG LTVC+ Sbjct 598 PTEEWQLSQARRVLADVRVAAAGHDGVLLRLPDVRALLADRLQGRPTRAGFRTGALTVCS 657 Query 633 MVPMRSVPHRVVCLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAA 692 + PMR+VPHRVVCL+GLDDG FPR DGDDVL R+P GERD RSEDRQL LDA+ AA Sbjct 658 LEPMRAVPHRVVCLLGLDDGAFPRGGAEDGDDVLLRDPCVGERDRRSEDRQLFLDAVSAA 717 Query 693 TQTLVITYTGADERTGQPRPPAVPLAELLDALDQTT----SAPVRERILVTHPLQPFDRK 748 ++ LV+ Y+GADERTG PRPPAVP+ ELLDALD P RE +LV HPLQP D + Sbjct 718 SERLVVLYSGADERTGAPRPPAVPVGELLDALDAAARRRDGRPAREHVLVRHPLQPVDER 777 Query 749 NVTPGALLGAKPFTFDPAALAAAQAAAGKRCPPTAFISGRLPAPPA------ADVTLADL 802 N GAL PF+FD A AAA A G+R F+ R P PPA A V L DL Sbjct 778 NFAAGALGRPGPFSFDAHAFAAAVAGRGERVDRVPFL--REPLPPAEPEGPGAQVDLDDL 835 Query 803 LDFFKDPVKGFF-RALDYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDA 861 + + PV+ F R L +L + D V+D +P++++ L +W +GER+L +L G+ P+ A Sbjct 836 VAALEHPVRWFLRRRLQVSLAGEADDVDDRLPLELEPLGQWPLGERLLGALLDGVEPNRA 895 Query 862 AHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDV--DLGDGRRLS 919 + EWRRG +PP LG RA + + + L A AHR A VDV +L G ++ Sbjct 896 LNVEWRRGEVPPKELG--RATLLAVQEKVLPVAQAAHRYAGEPASGVDVTAELPGGAVVT 953 Query 920 GTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARR 979 GTV V G + T+SKL PKH L AW+ L+ L A P W A+ IGR+ R A Sbjct 954 GTVPGVRGDVVLRSTFSKLGPKHRLRAWVQLLALVAARPETPWRAVTIGRAPVRAPRAAV 1013 Query 980 LFVPPPDPVAVLR---ELVLLYDAGRREPLPLPLKTSCAWAQARRDGQDPYP--PARECW 1034 + P LR ELV L DA REPLPLP+ +CA+A +R G + A Sbjct 1014 STLRTPTRAEALRHLGELVALRDAAAREPLPLPVACACAYATSRDGGAEEVQALEAASLE 1073 Query 1035 QTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEV--AGEETRLGALAARLWLPLLA 1092 + F DD HV WG A + G P A E E TRLG LA R+W PLLA Sbjct 1074 WSQGFERTDDH---HVLCWGAGATLREVAGVPSAAERAWWPEERTRLGVLARRVWQPLLA 1130 Query 1093 AEGSV 1097 E +V Sbjct 1131 HEETV 1135 >gi|54024514|ref|YP_118756.1| putative RecC protein [Nocardia farcinica IFM 10152] gi|54016022|dbj|BAD57392.1| putative RecC protein [Nocardia farcinica IFM 10152] Length=1112 Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/1126 (48%), Positives = 658/1126 (59%), Gaps = 51/1126 (4%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M LH+ RAER D+LAD L A LA PQPDPFA E+V V A+GVERWL+QRLS VLG G Sbjct 1 MPLHIRRAERADILADALAARLAVPQPDPFAAEVVAVPAKGVERWLTQRLSAVLGVSAGG 60 Query 61 ADGVCAGIAFRNPQSLIAE----ITGTL-DDDPWSPEALAWPLLAVIDASLDEPWCRTLA 115 DGV A I F +P +L+AE TG +DDPW+ + + W LL VID ++ EPWC LA Sbjct 61 RDGVAANIRFPSPAALVAEALAACTGIAPEDDPWAHQRVVWTLLRVIDRAVAEPWCAVLA 120 Query 116 SHLGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLG-----ELPG 170 HLG + R GRRY+ A +LA LF SYA QRP LL W G G E+P Sbjct 121 RHLG---APSRGRDHRIGRRYATAAQLAALFDSYAAQRPALLLDWAAGGDGDGAGGEVPA 177 Query 171 DLAWQPPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACTDVQL 228 DL WQP LWR L +G+ P R RLR P DLP RLSLFG TRL + + Sbjct 178 DLRWQPRLWRMLRAEIGSPSPAERLAPACERLRAEPGLLDLPERLSLFGVTRLTTDQLAV 237 Query 229 LDALAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRE 288 LDA+ ++ +WL HPS LW ALA A R DTS A +HPLL L RDVRE Sbjct 238 LDAVGAGREVDVWLVHPSPALWSALADRPPARA---RAADTSASAVRHPLLTGLARDVRE 294 Query 289 LQRALPAARATDEF-LGATTKPD----TLLGWLQADIAGNAPRPAGRSLSDADRSVQVHA 343 LQ+ L A D L A P +LL +QA I +A PA AD +VQVHA Sbjct 295 LQQRLAGTGAIDTGPLSAPEAPSPQQLSLLAGVQAGIRDDAWPPARLP---ADGTVQVHA 351 Query 344 CHGPARQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGL----GEVAGD 399 CHGPARQ++VLR+ LLGL DPTL+PRD+++MCP+++ YAPL+ A FG E Sbjct 352 CHGPARQVEVLRDCLLGLFAADPTLEPRDVLIMCPEVEAYAPLVRAAFGARGGADEAPES 411 Query 400 CHPAHRLRVRLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADD 459 HPAH LRVRLADR TNPLL+V LL +A+ R T +Q+L+LA + VR + GF DD Sbjct 412 AHPAHLLRVRLADRGRGVTNPLLAVVQTLLELADGRVTVTQVLDLAASETVRRRCGFDDD 471 Query 460 DLDTITTWVRESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTA 519 ++ + W + RWG R+ +GL NT +DRIL GV E WLD A Sbjct 472 AIERLREWAAAAGARWGIGQRQRQAFGLADFAQNTLNGAVDRILLGVTADESGDDWLDLA 531 Query 520 LPLDDVGSNRVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDG--W 577 LPLDDV SN V+LAGR AEFV+RL + L G RP W L ++LLT D W Sbjct 532 LPLDDVDSNDVDLAGRFAEFVDRLAVCLRDLRGPRPATEWAQVLGRALELLTDVPDSQSW 591 Query 578 QRAQVQREFADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMR 637 R + + E A AG LRL DV L +LA RPTRANFRTG LTVCTMVPMR Sbjct 592 VRTEARAEIAAATEHAGDVP---LRLADVAVLFADRLAARPTRANFRTGELTVCTMVPMR 648 Query 638 SVPHRVVCLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLV 697 SVPHRVV L+GLDD VFPR DGDDVLAREP+ GERD RSEDRQLLLDA+ AA + L+ Sbjct 649 SVPHRVVVLLGLDDDVFPRTGGVDGDDVLAREPLLGERDPRSEDRQLLLDAVLAARERLL 708 Query 698 ITYTGADERTGQPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLG 757 I +TGAD TG PRPPA+P+AELLD + A ++L HPLQ FDR+N P A Sbjct 709 IFHTGADPVTGSPRPPAIPVAELLDVVRAHVGADAMAQVLTRHPLQSFDRRNFDPAA--- 765 Query 758 AKPFTFDPAALAAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGF-FRA 816 PF+FD ALA A+AAA P F+ LP DV LADL+ F + PV+GF ++ Sbjct 766 --PFSFDTVALAGARAAARVPEPAPPFLPEPLPPAERGDVALADLIAFAEHPVRGFLWQR 823 Query 817 LDYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRL 876 L +P + + D++P+++D LA+W +GERML L G P +EWRRGTLPP RL Sbjct 824 LGLRVPEHEEDLADALPIELDGLAKWELGERMLAARLTGADPAGLRAAEWRRGTLPPFRL 883 Query 877 GVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYS 936 G EI + L A +A D+ VDLGDGRRL+GTV V G V T+S Sbjct 884 GGAVLDEIEHTVDTLVRVAQPDYAAAPRAVDIAVDLGDGRRLTGTVPEVRGETLVRTTFS 943 Query 937 KLAPKHVLPAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPP--PDPVAVLREL 994 ++A KH + AW+ L+ LAA E R W A+ GR K R R P P VAVLR+L Sbjct 944 RVAAKHRIGAWVALLALAATE-DRSWRAVTTGRGKFRRPAWRCELTAPDRPAAVAVLRDL 1002 Query 995 VLLYDAGRREPLPLPLKTSCAWAQARRDG---QDPYPPARECWQTNRFRPGD--DDAPAH 1049 V L D G EPLP+ +S A+A+ R G +D + A + P + H Sbjct 1003 VRLRDEGLTEPLPIAPASSAAYAERRVRGGSAEDAFAAAEREFDGGPNGPDKFGEHTDRH 1062 Query 1050 VR-AWGPRAPFEVLLGKPRAGEEVAGEETRLGALAARLWLPLLAAE 1094 +R WG AP L A GE TR GALA RLW PLLAAE Sbjct 1063 LRYVWG-TAPRLDHLAAAPAPAGSPGEPTRFGALAVRLWTPLLAAE 1107 >gi|336118817|ref|YP_004573589.1| exodeoxyribonuclease V subunit gamma [Microlunatus phosphovorus NM-1] gi|334686601|dbj|BAK36186.1| exodeoxyribonuclease V gamma chain [Microlunatus phosphovorus NM-1] Length=1125 Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/1152 (46%), Positives = 656/1152 (57%), Gaps = 88/1152 (7%) Query 1 MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60 M+L LHRAER+D L GL LL DP PDPFA ELV V RGVERWL+Q++S LG Sbjct 1 MSLQLHRAERSDRLVAGLADLLTDPLPDPFASELVAVPTRGVERWLAQQVSNRLG----- 55 Query 61 ADGVCAGIAFRNPQSLIAEITGTL-----DDDPWSPEALAWPLLAVIDASLDEPWCRTLA 115 VCAG+ F + + L+A+ G++ D+DPW P WP+L ++DA+ DE W L Sbjct 56 ---VCAGVEFPSVRRLVADALGSVTGIEPDEDPWQPALAVWPILTILDAAHDEAWAELLW 112 Query 116 SHLGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGE-----LPG 170 SHL + E R GRR+ ARR A LFA YA +RP LLA W G+ + L Sbjct 113 SHL----RGGSSEETRGGRRWLTARRAATLFARYASERPELLARWRQGEDVDSAGRPLAA 168 Query 171 DLAWQPPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACTDVQL 228 D AWQ LWR L + + P R +AR+ PA DLP RLS+FG T L T Q+ Sbjct 169 DRAWQAELWRRLRSELEIPSPAERLPGALARIAADPAAVDLPDRLSVFGLTGLDRTQHQV 228 Query 229 LDALAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRE 288 L ALA D+HLWL HPS LW LA A L R DTS A +H LL LGRD RE Sbjct 229 LLALAARRDVHLWLNHPSPALWNVLAARPPAP-LGRRADDTSLSAVRHRLLGYLGRDSRE 287 Query 289 LQRALPAARATDEFL--------------------GATTKPDTLLGWLQADIAGN-APRP 327 LQ L AA+ D L KP TLL LQ DI+ N APR Sbjct 288 LQLVLAAAQPVDRPLPGPADPEHDDSDPPDSPPFDSPQAKPVTLLRQLQRDISANSAPRL 347 Query 328 AGRS--LSDADRSVQVHACHGPARQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAP 385 + L+ ADRSVQVHA HGP RQ++VLRE+L+GLL+DDPTL+PRDIVV+CPDI+ +AP Sbjct 348 SADRPLLTTADRSVQVHAAHGPDRQVEVLRELLVGLLDDDPTLEPRDIVVLCPDIERFAP 407 Query 386 LIVAGFGLGEVAGD-CHPAHRLRVRLADRALTQTNPLLSVAAELLTIAETRATASQLLNL 444 L+ A FGL + GD HP HR+RVRLADRAL + NPLL V + +L +A R AS +L+L Sbjct 408 LVSAAFGLADEDGDTVHPGHRIRVRLADRALRRVNPLLEVLSTVLALAGGRVAASTVLDL 467 Query 445 AQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILT 504 + V +F F +DLD +T V S +RWG D HR+ YGL + NTW GLDR+L Sbjct 468 STQPAVARRFSFTGEDLDRLTQLVSASGVRWGLDAAHRKPYGLGHLGQNTWAAGLDRLLL 527 Query 505 GVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALA 564 G+AM + ++ TALPLD+V S+ VEL GRLAE + RL + PL WL+ Sbjct 528 GIAMDGEDNHFIGTALPLDEVDSSDVELIGRLAELMNRLGTALDAFDADHPLHEWLELTR 587 Query 565 TGIDLLT--ACNDGWQRAQVQREFADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRAN 622 ID LT D WQ R + L A A +L + +ALL +L GR RAN Sbjct 588 QTIDALTDTTARDSWQTGHAYRILSS-LGSAELAADTVLSRAEFQALLADRLGGRAGRAN 646 Query 623 FRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDR 682 FRTGTLTVCTM PMRSVPHRVVCL+G+DD FPR S DGDD+L +P G+RD RSEDR Sbjct 647 FRTGTLTVCTMYPMRSVPHRVVCLLGMDDLSFPRRSRDDGDDLLNGDPWVGDRDRRSEDR 706 Query 683 QLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAELLDALDQTT-----SAPVRERIL 737 QLLLDAI +AT+ L++ YTGAD RTG RPPAVP+ ELLDA+D T S P ++ ++ Sbjct 707 QLLLDAIMSATEHLIVLYTGADPRTGVSRPPAVPIGELLDAVDLTVRTEDGSVP-QDLVV 765 Query 738 VTHPLQPFDRKNVTPGALLG---AKPFTFDPAALAAAQAAAGKRCP-PTAFISGRLP-AP 792 HPLQPFD N A G +PF+FD AAL A+AAA +R P + + LP Sbjct 766 HRHPLQPFDAANFATSAQSGDSADRPFSFDLAALRGARAAAAERSSGPAVYPTEPLPDRE 825 Query 793 PAADVTLADLLDFFKDPVKGFFRALDYTLPW-DVDTVEDSIPVQVDALAEWTVGERMLRD 851 P V LADL+ F PVK R W + D V D +PV++D LA W +G R+L Sbjct 826 PTTRVELADLVRFLSHPVKALLRERGGLPTWEESDPVTDQLPVELDGLASWQIGNRLLTQ 885 Query 852 MLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVD 911 +LRG PD +EWRRGTLPP LG R + A ++A A G +HD+ ++ Sbjct 886 LLRGADPDQLRGAEWRRGTLPPRALGDRVLDRLMRLALEIADRARPWSSGESTSHDIAIE 945 Query 912 LGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQEPGREWSALCIGRSK 971 LG+ R L+GTV PV G +SV +S L+ + L A+ L+ L A PG W A+ IGR Sbjct 946 LGE-RLLTGTVAPVHGPTLLSVGFSWLSARQRLAAFSQLLALTAAHPGTPWQAVTIGRGG 1004 Query 972 TRNHIARRLFVPPPDP---VAVLRELVLLYDAGRREPLPLPLKTSCAWAQARRDGQDPYP 1028 T + P DP VL + + LY+ G REPLP + S +A+ R P Sbjct 1005 TS-------VLGPVDPGWAALVLDDQLDLYETGLREPLPFAPRASAEYARLRSRDFQVSP 1057 Query 1029 ---PARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEEVAG---EETRLGAL 1082 PA + W +R A+ R +GP LL E G E +R G L Sbjct 1058 ADSPAAKQWDQDR-------DSAYERFFGPGVTLAQLLDIASVTREERGTLAEPSRFGTL 1110 Query 1083 AARLWLPLLAAE 1094 A R++ P+L+AE Sbjct 1111 ARRVFHPMLSAE 1122 >gi|296139999|ref|YP_003647242.1| exodeoxyribonuclease V subunit gamma [Tsukamurella paurometabola DSM 20162] gi|296028133|gb|ADG78903.1| exodeoxyribonuclease V, gamma subunit [Tsukamurella paurometabola DSM 20162] Length=1103 Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/1123 (45%), Positives = 627/1123 (56%), Gaps = 55/1123 (4%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRAD 62 L +HR+ER D+L D L +LA P DPFA E+V V ARGVERW++Q L+ LG Sbjct 2 LTVHRSERGDVLVDALAEVLATPGADPFAAEVVAVPARGVERWITQSLAARLG------- 54 Query 63 GVCAGIAFRNPQSLIAEITG-----TLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASH 117 + A I F P +L+A LDDDPW E L W +LA +D EP LA H Sbjct 55 -IAANIDFPTPDALVAAAVAAASGIALDDDPWRGERLVWLVLAAVDELAFEPGGEVLARH 113 Query 118 LGHFATTDAEAEL---RRGRRYSVARRLAGLFASYARQRPGLLAAWL-----DGDLGELP 169 LG AE R RRY A LAGL SY RPG+L W DG G LP Sbjct 114 LG-VTRPGGWAEQPGHRPRRRYPTADMLAGLLRSYGANRPGMLVDWTAGRETDGTGGALP 172 Query 170 GDLAWQPPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACTDVQ 227 DL WQ L+R + G P R D ARLRD PA LP+R S++G TRL Sbjct 173 ADLRWQAELFRRVRDLAGVPSPAERLDAACARLRDEPALVALPSRFSVYGPTRLPADQAT 232 Query 228 LLDALAVHHDLHLWLPHPSDELWRALAGFQGA--DGLLPRRQDTSRRAAQHPLLETLGRD 285 + ALA H D+HLWLPHPS LW A A +PR + A +PLL +LGR+ Sbjct 233 VFAALAAHRDVHLWLPHPSPALWAASRERPSAAVGAAVPRVPGAT---ATNPLLASLGRE 289 Query 286 VRELQRALPAARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACH 345 ELQ + D A +P TLLG LQA +AG+AP PAG ++ D +V+ HACH Sbjct 290 ASELQERVSPVAGADVHHPAPARPGTLLGRLQAAVAGDAPLPAG--TAEPDGTVEFHACH 347 Query 346 GPARQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLI-------VAGFGLGEVAG 398 G AR I+VLRE L+ L EDDPTLQPR+++V CPDI++YAPLI V+G G E Sbjct 348 GAARMIEVLRERLVRLFEDDPTLQPREVLVTCPDIESYAPLIRSAFGQAVSGAGAVESGD 407 Query 399 DCHPAHRLRVRLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFAD 458 HP RLRVRLADR+L NPLL +L +A+ RAT +Q+L+LA PVR +F F+D Sbjct 408 PVHPGQRLRVRLADRSLRFANPLLDALVTVLELADGRATVAQVLDLAATDPVRRRFRFSD 467 Query 459 DDLDTITTWVRESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDT 518 D++ + W S RWG D + R R+GL NT LDRI+ GVA E WL Sbjct 468 SDIERLREWAGPSGARWGLDASGRERFGLGGFPQNTLATALDRIVLGVAADETESQWLGL 527 Query 519 ALPLDDVGSNRVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTAC--NDG 576 LPLDDV S ++L GR A++++ L G R AW ++L + A ++G Sbjct 528 GLPLDDVDSTDIDLVGRFADYLDVLTRATADSRGRRTAQAWAESLNALALAVAAVAPSEG 587 Query 577 WQRAQVQREFADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPM 636 WQ Q RE A L G R L LP+VRA+L ++LA +PTRANFRTG LTVCT+VPM Sbjct 588 WQVTQAGREIATALRGGGDRD---LTLPEVRAMLASRLAAKPTRANFRTGELTVCTLVPM 644 Query 637 RSVPHRVVCLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTL 696 RSVPHRVV L+GLDD VFPR + GDDVL R P GERD R+EDRQL LDA+ +AT L Sbjct 645 RSVPHRVVVLLGLDDEVFPRSTRYSGDDVLGRTPCVGERDPRAEDRQLFLDAVTSATDRL 704 Query 697 VITYTGADERTGQPRPPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALL 756 ++ YTGAD G PRPPAVP+AEL DA + + H LQPFD N P Sbjct 705 LVFYTGADPVKGTPRPPAVPVAELRDATRALLTDSDTTGLEFRHSLQPFDSDNFDPDRFG 764 Query 757 GAKPFTFDPAALAAAQAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRA 816 PF+FDPAA A A AA G PP F+ G L A DV L LL F + PVK F R Sbjct 765 LTVPFSFDPAAYAGAVAAGGTPEPPAPFLDGPL-AAVIEDVDLESLLRFCEHPVKAFLRQ 823 Query 817 -LDYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGR 875 L +T+P + + +++ + D L W +G+RML L G+ D A +E RRGTLPP Sbjct 824 RLGFTVPDQDEELAEALTIAPDGLQRWDIGDRMLASALAGVESDRFAAAEMRRGTLPPFA 883 Query 876 LGVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTY 935 LG I +L+ H G D+ VDLG GRRL G+V V+ G V ++ Sbjct 884 LGSAVLDAIAGTVAELSRVVSPHLTGPATTVDIAVDLGAGRRLVGSVPSVYPGGIVRSSF 943 Query 936 SKLAPKHVLPAWIGLVTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELV 995 S+LAPKH + AW+ L+ LAA E SA+ IGR + R + RL V P DPVA LR LV Sbjct 944 SRLAPKHRVAAWVSLLALAAGG-HSERSAVAIGRGRFRGVLTSRLTV-PADPVAELRALV 1001 Query 996 LLYDAGRREPLPLPLKTSCAWAQ---ARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRA 1052 L D G EPLPL S +A+ A Q AR +++ F G D + +R Sbjct 1002 DLRDRGLTEPLPLFPSASAVYAERGIAGDSQQMALDAARGEFESG-FGDGKDRS---IRY 1057 Query 1053 WGPRAPFEVLLGKPRAGE-EVAGEETRLGALAARLWLPLLAAE 1094 + F+ LG PR E E + TR GALAARLW+PLL E Sbjct 1058 ALGESAFDDALGPPRGSEAEFSRAGTRFGALAARLWVPLLTHE 1100 >gi|336321364|ref|YP_004601332.1| exodeoxyribonuclease V subunit gamma [Cellvibrio gilvus ATCC 13127] gi|336104945|gb|AEI12764.1| exodeoxyribonuclease V, gamma subunit [Cellvibrio gilvus ATCC 13127] Length=1173 Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/1158 (44%), Positives = 658/1158 (57%), Gaps = 83/1158 (7%) Query 3 LHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCG--PGR 60 LH+H AER D L + L A LA P DPFA++LV V RGVERW++QRL+ LG G PG Sbjct 27 LHVHVAERADALVEALAAELAAPPDDPFAEDLVAVPTRGVERWVAQRLAHRLGVGAAPGA 86 Query 61 ADGVCAGIAFRNPQSLIAEITGTL-----DDDPWSPEALAWPLLAVIDASLDEPWCRTLA 115 DGVCA + F +P ++A++ + + DPW E++ W +L ++D EPW T+A Sbjct 87 GDGVCAHVRFASPARVVAQVLAGVTGVEREQDPWRAESVVWDVLEILDERAGEPWLATVA 146 Query 116 SHLGHFATTDA----EAELRRGRRYSVARRLAGLFASYARQRPGLLAAWL-----DGDLG 166 H+G + + E+R GRR+ +A+RLA L +Y +RP L+ +W DG Sbjct 147 RHVGAVPGAGSRDGDDDEVRAGRRFHLAQRLAHLLTAYDARRPALVRSWTAGGDDDGTGQ 206 Query 167 ELPGDLAWQPPLWRALVTTVGADPPHVRHDKTIARLRDGPA--DLPARLSLFGHTRLACT 224 L DLAWQP LWRALV +G PP VR + ARL P DLP RL +FG T L Sbjct 207 PLAPDLAWQPVLWRALVDRLGP-PPAVRLEDAAARLVADPGLVDLPPRLHVFGPTALPAG 265 Query 225 DVQLLDALAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRA----AQHPLLE 280 +++L ALA D+HLWLP PS LW A+ G D RR A+HPLL Sbjct 266 HLRVLSALAHARDVHLWLPQPSLALWSAVGPVVG---------DVRRRELPAPARHPLLR 316 Query 281 TLGRDVRELQRALPAARATDEFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSD------ 334 ++ D EL + A A + A T+LG LQA + + P R D Sbjct 317 SMATDATELAARVGALAAHITHVPAPPPRATVLGALQARVRADTPADGARPADDRVPVAP 376 Query 335 ADRSVQVHACHGPARQIDVLREVLLGLLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLG 394 DRSVQVHACHG +RQ++VLR+V++GLL DDPTL+PRD++VMCPD++ +APL+ A G Sbjct 377 GDRSVQVHACHGRSRQVEVLRDVVVGLLADDPTLEPRDVLVMCPDVEAFAPLVHAVLGPA 436 Query 395 -EVAGDC----HPAHRLRVRLADRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAP 449 +VAGD HP LRVR+ADR+ +TNP+L+V LL +A++R TAS +++LA AAP Sbjct 437 PDVAGDQDVPDHPGRTLRVRIADRSPARTNPVLAVLETLLGLADSRVTASAVVDLAGAAP 496 Query 450 VRAKFGFADDDLDTITTWVRESNIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMS 509 VR +F F DD LD + W ES + WG D R R+ L V TW LDR+L GV M+ Sbjct 497 VRRRFAFDDDALDRLRAWALESGVHWGEDVGRRARFRLGAVAQGTWSAALDRLLLGVTMA 556 Query 510 EDSQAWLDTALPLDDVGSNRVELAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDL 569 E ++ LP+DDVGS+ V L GR+AE ++RL V+ L+GA P W D L + L Sbjct 557 EQDARFVGAVLPIDDVGSSDVALVGRVAEMLDRLAAVLADLTGAHPAAYWCDVLDRALTL 616 Query 570 LTACNDG--WQRAQVQREFADVLARAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGT 627 LTA WQ + + V ++ R LLRLPDV AL+ +LAGRPTRA FRTG Sbjct 617 LTAVEPAHRWQELEAAQVLTAVRTQSAGRET-LLRLPDVVALVRPRLAGRPTRAGFRTGA 675 Query 628 LTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLD 687 LTVC+M PMR+VPHRVV L+G+DDG FPR DGDDVLAR+PM GE D R EDRQL LD Sbjct 676 LTVCSMAPMRAVPHRVVVLLGMDDGAFPRAGRRDGDDVLARDPMVGEHDRRQEDRQLFLD 735 Query 688 AIGAATQTLVITYTGADERTGQPRPPAVPLAELLDALDQTTSAP--VRERILVTHPLQPF 745 A+ AAT LV+ +TGADERTG RPP VP+ ELLDA+D + P R ++V HPLQP Sbjct 736 AVMAATDHLVVLHTGADERTGARRPPCVPVGELLDAVDDAVTLPGGARGALVVEHPLQPV 795 Query 746 DRKNVTPGALLGAKPFTFDPAALAAAQAAAGKRCPPTAFISGRLPAP--PAADVTLADLL 803 D + TPGAL PF FD L AA+ AAG R P ++ LP A D L DL+ Sbjct 796 DPRVFTPGALGRPGPFGFDALDLTAARTAAGPREPAGPLVTEPLPPDDGSAPDHDLDDLI 855 Query 804 DFFKDPVKGF-FRALDYTLPWDVDTVEDSIPVQVDALAEWTVGERMLRDMLRGLHPDDAA 862 + P + F + L LP D ++D +P+ DAL W VG+R+L L G D A Sbjct 856 AVLQHPPRAFVVQRLGARLPRDTPQLDDRMPLAPDALTRWGVGDRLLSAALDGADLADVA 915 Query 863 HSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRDGHGQAHDVDVDLGDGRRLSGTV 922 +E RRG LPP LG EI +AR + A ++ DV + L G ++GTV Sbjct 916 AAERRRGHLPPRDLGAAALDEIVAQARAILETARPLLAAPHESRDVRIALAGG-EVTGTV 974 Query 923 TPVFGGRTVSVTYSKLAPKHVLPAWIGLVTLAAQE-------PG----REWSALCIGRSK 971 V G R V+V YS+LAPKH++ W+ L+ L+A PG R AL IGR Sbjct 975 RGVRGHRLVNVVYSRLAPKHLIATWVQLLALSAGTVPPPAAGPGSAAERVRVALTIGRGA 1034 Query 972 TRNHIARRLFVPPPDPVA-VLRELVLLYDAGRREPLPLPLKTSCAWAQARRDGQDPYPPA 1030 ++ L P P+ A +L +L+ ++D + P+PL +TS A+A AR + Sbjct 1035 GDAAVS-VLRAPEPEHAAELLTDLLAVHDEALQAPVPLLTRTSHAYAAARWERGS----T 1089 Query 1031 RECWQTNRFRPGD-DDA-----------PAHVRAWGPRAPFEVLLGKPRAGEEV--AGEE 1076 RE Q R G DDA P HV AWG + LLG+P + E Sbjct 1090 REATQAARRALGSLDDAESGRGGFERVDPYHVLAWGDGFELDDLLGEPTPLDRALRPDEP 1149 Query 1077 TRLGALAARLWLPLLAAE 1094 TR GALA+R+W LL E Sbjct 1150 TRFGALASRVWRALLEHE 1167 Lambda K H 0.321 0.138 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2762511442020 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40