BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0633c
Length=279
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607773|ref|NP_215147.1| hypothetical protein Rv0633c [Mycob... 565 3e-159
gi|15840034|ref|NP_335071.1| hypothetical protein MT0661 [Mycoba... 565 3e-159
gi|289442025|ref|ZP_06431769.1| hypothetical exported protein [M... 563 9e-159
gi|308377481|ref|ZP_07479313.2| hypothetical exported protein [M... 557 7e-157
gi|289749134|ref|ZP_06508512.1| LOW QUALITY PROTEIN: hypothetica... 551 3e-155
gi|31791815|ref|NP_854308.1| hypothetical protein Mb0650c [Mycob... 527 9e-148
gi|240169405|ref|ZP_04748064.1| hypothetical protein MkanA1_0883... 410 1e-112
gi|296168420|ref|ZP_06850300.1| conserved hypothetical protein [... 404 6e-111
gi|254823025|ref|ZP_05228026.1| hypothetical protein MintA_24059... 400 2e-109
gi|41410201|ref|NP_963037.1| hypothetical protein MAP4103c [Myco... 387 1e-105
gi|183980984|ref|YP_001849275.1| hypothetical protein MMAR_0963 ... 387 1e-105
gi|118616506|ref|YP_904838.1| hypothetical protein MUL_0714 [Myc... 383 2e-104
gi|118466633|ref|YP_883664.1| hypothetical protein MAV_4533 [Myc... 383 2e-104
gi|342858870|ref|ZP_08715524.1| hypothetical protein MCOL_08338 ... 381 5e-104
gi|333989295|ref|YP_004521909.1| hypothetical protein JDM601_065... 347 2e-93
gi|118471537|ref|YP_885722.1| hypothetical protein MSMEG_1332 [M... 234 1e-59
gi|289568570|ref|ZP_06448797.1| hypothetical exported protein [M... 184 1e-44
gi|183983568|ref|YP_001851859.1| hypothetical protein MMAR_3588 ... 73.9 3e-11
gi|116669565|ref|YP_830498.1| hypothetical protein Arth_1001 [Ar... 71.2 1e-10
gi|260430752|ref|ZP_05784724.1| phosphonate monoester hydrolase ... 44.3 0.019
gi|167648439|ref|YP_001686102.1| hypothetical protein Caul_4484 ... 44.3 0.021
gi|300115361|ref|YP_003761936.1| hypothetical protein Nwat_2868 ... 43.9 0.026
gi|220910946|ref|YP_002486255.1| hypothetical protein Achl_0163 ... 43.9 0.028
gi|120536867|ref|YP_956925.1| hypothetical protein Maqu_4157 [Ma... 42.4 0.083
gi|71278509|ref|YP_266959.1| hypothetical protein CPS_0191 [Colw... 42.0 0.11
gi|330825256|ref|YP_004388559.1| hypothetical protein Alide2_268... 40.8 0.24
gi|271963381|ref|YP_003337577.1| hypothetical protein Sros_1846 ... 40.0 0.35
gi|210634737|ref|ZP_03298265.1| hypothetical protein COLSTE_0219... 40.0 0.37
gi|257884221|ref|ZP_05663874.1| conserved hypothetical protein [... 40.0 0.38
gi|325958873|ref|YP_004290339.1| hypothetical protein Metbo_1122... 39.3 0.73
gi|229199664|ref|ZP_04326309.1| hypothetical protein bcere0001_5... 38.9 0.77
gi|32419264|gb|AAN85152.1| unknown [Pseudomonas syringae pv. syr... 38.9 0.84
gi|300115218|ref|YP_003761793.1| hypothetical protein Nwat_2704 ... 38.5 1.0
gi|296119298|ref|ZP_06837866.1| conserved hypothetical protein [... 38.1 1.4
gi|193214160|ref|YP_001995359.1| type 11 methyltransferase [Chlo... 38.1 1.6
gi|336397761|ref|ZP_08578561.1| hypothetical protein Premu_0658 ... 36.2 6.3
gi|254474644|ref|ZP_05088030.1| phosphonate monoester hydrolase ... 35.8 8.0
gi|315501687|ref|YP_004080574.1| hypothetical protein ML5_0881 [... 35.4 8.5
>gi|15607773|ref|NP_215147.1| hypothetical protein Rv0633c [Mycobacterium tuberculosis H37Rv]
gi|148660405|ref|YP_001281928.1| hypothetical protein MRA_0642 [Mycobacterium tuberculosis H37Ra]
gi|148821835|ref|YP_001286589.1| hypothetical protein TBFG_10644 [Mycobacterium tuberculosis F11]
40 more sequence titles
Length=279
Score = 565 bits (1456), Expect = 3e-159, Method: Compositional matrix adjust.
Identities = 279/279 (100%), Positives = 279/279 (100%), Gaps = 0/279 (0%)
Query 1 MVDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY 60
MVDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY
Sbjct 1 MVDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY 60
Query 61 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 120
VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ
Sbjct 61 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 120
Query 121 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 180
ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET
Sbjct 121 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 180
Query 181 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 240
KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI
Sbjct 181 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 240
Query 241 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 279
NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG
Sbjct 241 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 279
>gi|15840034|ref|NP_335071.1| hypothetical protein MT0661 [Mycobacterium tuberculosis CDC1551]
gi|253797571|ref|YP_003030572.1| hypothetical protein TBMG_00642 [Mycobacterium tuberculosis KZN
1435]
gi|254230965|ref|ZP_04924292.1| hypothetical exported protein [Mycobacterium tuberculosis C]
18 more sequence titles
Length=286
Score = 565 bits (1455), Expect = 3e-159, Method: Compositional matrix adjust.
Identities = 279/279 (100%), Positives = 279/279 (100%), Gaps = 0/279 (0%)
Query 1 MVDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY 60
MVDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY
Sbjct 8 MVDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY 67
Query 61 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 120
VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ
Sbjct 68 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 127
Query 121 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 180
ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET
Sbjct 128 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 187
Query 181 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 240
KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI
Sbjct 188 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 247
Query 241 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 279
NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG
Sbjct 248 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 286
>gi|289442025|ref|ZP_06431769.1| hypothetical exported protein [Mycobacterium tuberculosis T46]
gi|289752675|ref|ZP_06512053.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289414944|gb|EFD12184.1| hypothetical exported protein [Mycobacterium tuberculosis T46]
gi|289693262|gb|EFD60691.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=279
Score = 563 bits (1452), Expect = 9e-159, Method: Compositional matrix adjust.
Identities = 278/279 (99%), Positives = 278/279 (99%), Gaps = 0/279 (0%)
Query 1 MVDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY 60
MVDSMGWVLSSWHEVTGVDSGTWLAW AWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY
Sbjct 1 MVDSMGWVLSSWHEVTGVDSGTWLAWVAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY 60
Query 61 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 120
VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ
Sbjct 61 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 120
Query 121 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 180
ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET
Sbjct 121 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 180
Query 181 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 240
KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI
Sbjct 181 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 240
Query 241 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 279
NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG
Sbjct 241 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 279
>gi|308377481|ref|ZP_07479313.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu009]
gi|308379829|ref|ZP_07487740.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu011]
gi|308355675|gb|EFP44526.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu009]
gi|308363486|gb|EFP52337.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu011]
Length=275
Score = 557 bits (1435), Expect = 7e-157, Method: Compositional matrix adjust.
Identities = 275/275 (100%), Positives = 275/275 (100%), Gaps = 0/275 (0%)
Query 5 MGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMF 64
MGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMF
Sbjct 1 MGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMF 60
Query 65 MEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELPM 124
MEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELPM
Sbjct 61 MEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELPM 120
Query 125 LAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVL 184
LAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVL
Sbjct 121 LAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVL 180
Query 185 DWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAA 244
DWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAA
Sbjct 181 DWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAA 240
Query 245 AETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 279
AETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG
Sbjct 241 AETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 275
>gi|289749134|ref|ZP_06508512.1| LOW QUALITY PROTEIN: hypothetical exported protein [Mycobacterium
tuberculosis T92]
gi|289689721|gb|EFD57150.1| LOW QUALITY PROTEIN: hypothetical exported protein [Mycobacterium
tuberculosis T92]
Length=280
Score = 551 bits (1421), Expect = 3e-155, Method: Compositional matrix adjust.
Identities = 272/273 (99%), Positives = 272/273 (99%), Gaps = 0/273 (0%)
Query 1 MVDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY 60
MVDSMGWVLSSWHEVTGVDSGTWLAW AWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY
Sbjct 1 MVDSMGWVLSSWHEVTGVDSGTWLAWVAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY 60
Query 61 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 120
VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ
Sbjct 61 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 120
Query 121 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 180
ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET
Sbjct 121 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 180
Query 181 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 240
KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI
Sbjct 181 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 240
Query 241 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQP 273
NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQP
Sbjct 241 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQP 273
>gi|31791815|ref|NP_854308.1| hypothetical protein Mb0650c [Mycobacterium bovis AF2122/97]
gi|121636552|ref|YP_976775.1| hypothetical protein BCG_0680c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224989024|ref|YP_002643711.1| hypothetical protein JTY_0650 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31617402|emb|CAD93512.1| POSSIBLE EXPORTED PROTEIN [Mycobacterium bovis AF2122/97]
gi|121492199|emb|CAL70666.1| Possible exported protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772137|dbj|BAH24943.1| hypothetical protein JTY_0650 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341600568|emb|CCC63238.1| possible exported protein [Mycobacterium bovis BCG str. Moreau
RDJ]
Length=276
Score = 527 bits (1357), Expect = 9e-148, Method: Compositional matrix adjust.
Identities = 276/279 (99%), Positives = 276/279 (99%), Gaps = 3/279 (1%)
Query 1 MVDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPY 60
MVDSMGWVLSSWHEVTGVDSGTWLAWAA LGLGVVALVVTKRQIQRNRRLAAEQTRPY
Sbjct 1 MVDSMGWVLSSWHEVTGVDSGTWLAWAA---LGLGVVALVVTKRQIQRNRRLAAEQTRPY 57
Query 61 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 120
VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ
Sbjct 58 VAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQ 117
Query 121 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 180
ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET
Sbjct 118 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLET 177
Query 181 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 240
KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI
Sbjct 178 KVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRI 237
Query 241 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 279
NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG
Sbjct 238 NRAAAETQDRWRARQVEVPTEVSQRSEGQGPQPTRIPAG 276
>gi|240169405|ref|ZP_04748064.1| hypothetical protein MkanA1_08833 [Mycobacterium kansasii ATCC
12478]
Length=277
Score = 410 bits (1054), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 221/261 (85%), Positives = 235/261 (91%), Gaps = 0/261 (0%)
Query 5 MGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMF 64
MGWV SSWH VT V+SGTW A AAWAAL LGV+ALVV QI+RNR L EQTRPYV+M
Sbjct 1 MGWVQSSWHGVTDVESGTWFAVAAWAALALGVIALVVMNYQIRRNRELTFEQTRPYVSML 60
Query 65 MEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELPM 124
MEPHVADWHVIELVVRNFGRTAAYD+RFSFPNPPTVA+YENA++GYADVVEL+LP+ELP
Sbjct 61 MEPHVADWHVIELVVRNFGRTAAYDIRFSFPNPPTVAEYENASDGYADVVELQLPRELPT 120
Query 125 LAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVL 184
LAPGQEWRMVWDSALDRAEIG G+ESRF GTV YYDRPEQ WRFWRRGRRPLETKVVL
Sbjct 121 LAPGQEWRMVWDSALDRAEIGHGVESRFEGTVIYYDRPEQRPGWRFWRRGRRPLETKVVL 180
Query 185 DWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAA 244
DWDALPPV RIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRA
Sbjct 181 DWDALPPVQRIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAV 240
Query 245 AETQDRWRARQVEVPTEVSQR 265
ETQDRWR RQ++ PT+VS R
Sbjct 241 QETQDRWRTRQLDEPTDVSLR 261
>gi|296168420|ref|ZP_06850300.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896714|gb|EFG76349.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=280
Score = 404 bits (1039), Expect = 6e-111, Method: Compositional matrix adjust.
Identities = 212/264 (81%), Positives = 232/264 (88%), Gaps = 0/264 (0%)
Query 2 VDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYV 61
+DSMGWV SWH +T V SGTW+AWAAWAA+ L VV LV T RQI RNRRLAAEQTRP V
Sbjct 1 MDSMGWVQDSWHGITHVGSGTWIAWAAWAAIVLAVVTLVFTSRQIARNRRLAAEQTRPQV 60
Query 62 AMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQE 121
AMFMEPH ADWHVIELVVRNFG+TAAYD+ FSF NPPTVA+YENA +GYADVVELRLP+E
Sbjct 61 AMFMEPHPADWHVIELVVRNFGQTAAYDITFSFTNPPTVAEYENATDGYADVVELRLPRE 120
Query 122 LPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETK 181
LP+LAPGQEWRMVWDSALDRAEIG GIESRF GT++Y+D PE+PR WRFW R R PLET
Sbjct 121 LPVLAPGQEWRMVWDSALDRAEIGSGIESRFTGTISYFDGPERPRGWRFWERERLPLETP 180
Query 182 VVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRIN 241
VVLDWD+LPPV RIELMTTHDLAKREKQKLELLR LLTYFHYASKETRP+VFRSEI+RIN
Sbjct 181 VVLDWDSLPPVQRIELMTTHDLAKREKQKLELLRGLLTYFHYASKETRPEVFRSEIERIN 240
Query 242 RAAAETQDRWRARQVEVPTEVSQR 265
A ETQDRWR RQ++ PT+VS R
Sbjct 241 GAVRETQDRWRTRQLDEPTDVSLR 264
>gi|254823025|ref|ZP_05228026.1| hypothetical protein MintA_24059 [Mycobacterium intracellulare
ATCC 13950]
Length=277
Score = 400 bits (1027), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 205/261 (79%), Positives = 228/261 (88%), Gaps = 0/261 (0%)
Query 5 MGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMF 64
MGW+ SWH VT V S TW+AWAAWAA+ L VV LV T QI RNRR AAEQTRP+V +F
Sbjct 1 MGWIQDSWHGVTHVGSSTWIAWAAWAAIALAVVTLVFTNSQITRNRRAAAEQTRPHVGVF 60
Query 65 MEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELPM 124
MEPH ADWHVIELVVRNFG+TAAYD++FSF NPPTVA+YE+A +GYADVVELRLP+ELP+
Sbjct 61 MEPHSADWHVIELVVRNFGQTAAYDIQFSFDNPPTVAEYESATDGYADVVELRLPRELPV 120
Query 125 LAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVL 184
LAPGQEWR+VWDSALDRAEIG GIESRF GTV+YYDRP+QPR WRFW+R R PL T VVL
Sbjct 121 LAPGQEWRLVWDSALDRAEIGSGIESRFTGTVSYYDRPDQPRGWRFWQRERSPLHTDVVL 180
Query 185 DWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAA 244
DWDALPPV RIELMTTHDLAKREK+KLELLR LLTYFHYASKETRP+VFRSEI+RIN A
Sbjct 181 DWDALPPVQRIELMTTHDLAKREKEKLELLRGLLTYFHYASKETRPEVFRSEIERINAAV 240
Query 245 AETQDRWRARQVEVPTEVSQR 265
ETQDRWR RQ++ PT+VS R
Sbjct 241 RETQDRWRTRQLDEPTDVSLR 261
>gi|41410201|ref|NP_963037.1| hypothetical protein MAP4103c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399035|gb|AAS06653.1| hypothetical protein MAP_4103c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=280
Score = 387 bits (994), Expect = 1e-105, Method: Compositional matrix adjust.
Identities = 203/264 (77%), Positives = 226/264 (86%), Gaps = 0/264 (0%)
Query 2 VDSMGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYV 61
+DSMGW+ SWH VT V S TW+AWAAWAA+ L V+ L+ T QI RNRR AAEQTRP+V
Sbjct 1 MDSMGWIQDSWHGVTHVGSSTWIAWAAWAAIALAVITLIFTNSQIARNRRAAAEQTRPHV 60
Query 62 AMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQE 121
AMFMEPH ADWHVIELVVRNFG+TAAYD+ FSF NPPTVA+YE+A +GYADVVELRLP++
Sbjct 61 AMFMEPHPADWHVIELVVRNFGQTAAYDIEFSFDNPPTVAEYESATDGYADVVELRLPRQ 120
Query 122 LPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETK 181
LP+LAPGQEWR VWDSALDRAEIG GIESRF GTVTYYDRP RFW+R R PL T
Sbjct 121 LPVLAPGQEWRTVWDSALDRAEIGSGIESRFTGTVTYYDRPAPAGGRRFWQRERTPLHTD 180
Query 182 VVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRIN 241
VVLDWDALPPV RIELMTTHDLAKREK+KLELLR LLTYFHYASKETRP+VFRSEI+RIN
Sbjct 181 VVLDWDALPPVQRIELMTTHDLAKREKEKLELLRGLLTYFHYASKETRPEVFRSEIERIN 240
Query 242 RAAAETQDRWRARQVEVPTEVSQR 265
A ETQDRWR+RQ++ PT+VS R
Sbjct 241 AAVRETQDRWRSRQLDEPTDVSLR 264
>gi|183980984|ref|YP_001849275.1| hypothetical protein MMAR_0963 [Mycobacterium marinum M]
gi|183174310|gb|ACC39420.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=276
Score = 387 bits (993), Expect = 1e-105, Method: Compositional matrix adjust.
Identities = 184/222 (83%), Positives = 206/222 (93%), Gaps = 0/222 (0%)
Query 44 RQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQY 103
RQIQRN++L +EQ RPYV+M MEPH+ DWHVIELVVRNFGRTAAY+V+FSFP PPTVA+Y
Sbjct 39 RQIQRNQQLTSEQARPYVSMLMEPHITDWHVIELVVRNFGRTAAYNVQFSFPRPPTVAEY 98
Query 104 ENAANGYADVVELRLPQELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPE 163
ENA++GYADVVEL+LP+ELP LAPGQEWRMVWDSALDRAEIG+G+ESRF GTVTYYDRP+
Sbjct 99 ENASDGYADVVELQLPRELPTLAPGQEWRMVWDSALDRAEIGQGVESRFEGTVTYYDRPD 158
Query 164 QPRRWRFWRRGRRPLETKVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHY 223
QPR WRFW R RR L+T+VVLDW+ALPPV RIELMTTHDLAKREKQKLELLRS+LTYFHY
Sbjct 159 QPRGWRFWHRPRRQLQTQVVLDWEALPPVQRIELMTTHDLAKREKQKLELLRSVLTYFHY 218
Query 224 ASKETRPDVFRSEIDRINRAAAETQDRWRARQVEVPTEVSQR 265
ASKETRPDVFRSEI+RINRA AETQDRWR RQV+ PT+VS R
Sbjct 219 ASKETRPDVFRSEIERINRAVAETQDRWRTRQVDQPTDVSLR 260
>gi|118616506|ref|YP_904838.1| hypothetical protein MUL_0714 [Mycobacterium ulcerans Agy99]
gi|118568616|gb|ABL03367.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=290
Score = 383 bits (984), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 206/274 (76%), Positives = 233/274 (86%), Gaps = 10/274 (3%)
Query 2 VDSMGWVLS-SWHEVTG---------VDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRR 51
+ SMGW S SW + G V+S TWLA AAWAAL + VAL+V RQIQRN++
Sbjct 1 MQSMGWGQSNSWQVMAGKAGTAGLGNVESSTWLAIAAWAALAVVAVALIVMYRQIQRNQQ 60
Query 52 LAAEQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYA 111
L +EQ RPYV+M MEPH+ DWHVIELVVRNFGRTAAY+V+FSFP PTVA+YENA++ YA
Sbjct 61 LTSEQARPYVSMLMEPHITDWHVIELVVRNFGRTAAYNVQFSFPRTPTVAEYENASDSYA 120
Query 112 DVVELRLPQELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFW 171
DVVEL+LP+ELP LAPGQEWRMVWDSALDRAEIG+G+ESRF GTVTYYDRP+QPR WRFW
Sbjct 121 DVVELQLPRELPTLAPGQEWRMVWDSALDRAEIGQGVESRFEGTVTYYDRPDQPRGWRFW 180
Query 172 RRGRRPLETKVVLDWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPD 231
R RR L+T+VVLDW+ALPPV RIELMTTHDLAKREKQKLELLRS+LTYFHYASKETRPD
Sbjct 181 HRPRRQLQTQVVLDWEALPPVQRIELMTTHDLAKREKQKLELLRSVLTYFHYASKETRPD 240
Query 232 VFRSEIDRINRAAAETQDRWRARQVEVPTEVSQR 265
VFRSEI+RINRA AETQDRWR RQV+ PT+VS R
Sbjct 241 VFRSEIERINRAVAETQDRWRTRQVDQPTDVSLR 274
>gi|118466633|ref|YP_883664.1| hypothetical protein MAV_4533 [Mycobacterium avium 104]
gi|254776966|ref|ZP_05218482.1| hypothetical protein MaviaA2_20176 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118167920|gb|ABK68817.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336460577|gb|EGO39470.1| hypothetical protein MAPs_39330 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=277
Score = 383 bits (983), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 201/261 (78%), Positives = 223/261 (86%), Gaps = 0/261 (0%)
Query 5 MGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMF 64
MGW+ SWH VT V S TW+AWAAWAA+ L V+ L+ T QI RNRR AAEQTRP+VAMF
Sbjct 1 MGWIQDSWHGVTHVGSSTWIAWAAWAAIALAVITLIFTNSQIARNRRAAAEQTRPHVAMF 60
Query 65 MEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELPM 124
MEPH ADWHVIELVVRNFG+TAAYD+ FSF NPPTVA+YE+A +GYADVVELRLP++LP+
Sbjct 61 MEPHPADWHVIELVVRNFGQTAAYDIEFSFDNPPTVAEYESATDGYADVVELRLPRQLPV 120
Query 125 LAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVL 184
LAPGQEWR VWDSALDRAEIG GIESRF GTVTYYDRP RFW+R R PL T VVL
Sbjct 121 LAPGQEWRTVWDSALDRAEIGSGIESRFTGTVTYYDRPAPAGGRRFWQRERTPLHTDVVL 180
Query 185 DWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAA 244
DWDALPPV RIELMTTHDLAKREK+KLELLR LLTYFHYASKETRP+VFRSEI+RIN A
Sbjct 181 DWDALPPVQRIELMTTHDLAKREKEKLELLRGLLTYFHYASKETRPEVFRSEIERINAAV 240
Query 245 AETQDRWRARQVEVPTEVSQR 265
ETQDRWR+RQ++ PT+VS R
Sbjct 241 RETQDRWRSRQLDEPTDVSLR 261
>gi|342858870|ref|ZP_08715524.1| hypothetical protein MCOL_08338 [Mycobacterium colombiense CECT
3035]
gi|342133111|gb|EGT86314.1| hypothetical protein MCOL_08338 [Mycobacterium colombiense CECT
3035]
Length=277
Score = 381 bits (979), Expect = 5e-104, Method: Compositional matrix adjust.
Identities = 207/261 (80%), Positives = 226/261 (87%), Gaps = 0/261 (0%)
Query 5 MGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMF 64
MGW+ SWH+VT V S TW+AWAAWAA+ L VV L+ T QI RNRR AAEQTRP VAMF
Sbjct 1 MGWIQDSWHDVTHVGSSTWIAWAAWAAIVLAVVTLIFTNAQINRNRRAAAEQTRPQVAMF 60
Query 65 MEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELPM 124
MEPH ADWHVIELVVRNFGRTAAYD+ FSF NPPTVA+YENA +GYADV+ELRLP+ELPM
Sbjct 61 MEPHSADWHVIELVVRNFGRTAAYDIGFSFVNPPTVAEYENATDGYADVIELRLPRELPM 120
Query 125 LAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVL 184
LAPGQEWRMVWDSALDRAEIG GIESRF GT+TYYDRP++PR RFW R R PL T VVL
Sbjct 121 LAPGQEWRMVWDSALDRAEIGSGIESRFTGTLTYYDRPDRPRGRRFWERERSPLHTDVVL 180
Query 185 DWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAA 244
DWDALPPV RIELMTTHDLAKREK+KLELLR LLTYFHYASKETRP+VFRSEI+RIN A
Sbjct 181 DWDALPPVQRIELMTTHDLAKREKEKLELLRGLLTYFHYASKETRPEVFRSEIERINAAV 240
Query 245 AETQDRWRARQVEVPTEVSQR 265
ETQDRWR RQ++ PT+VS R
Sbjct 241 RETQDRWRTRQLDEPTDVSLR 261
>gi|333989295|ref|YP_004521909.1| hypothetical protein JDM601_0655 [Mycobacterium sp. JDM601]
gi|333485263|gb|AEF34655.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=276
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/251 (71%), Positives = 204/251 (82%), Gaps = 1/251 (0%)
Query 5 MGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMF 64
MG V W+++T WLA AAW A+G+ V+AL+ RQ+QRNRR AAEQTRP+VAMF
Sbjct 1 MGSVEDRWYDITHAGPEAWLACAAWLAIGITVLALIYLNRQLQRNRRAAAEQTRPHVAMF 60
Query 65 MEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELPM 124
MEPH ADWHVIELVVRNFG+TAAYD+ FSF PPTVA+YE A++GYADVV L+LP+EL +
Sbjct 61 MEPHAADWHVIELVVRNFGKTAAYDIGFSFAQPPTVARYETASDGYADVVALQLPEELTV 120
Query 125 LAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVL 184
LAP QEWR VWDSA+DRAE+G GIESRF GTV+YYD PE+P+ W F R R E KV L
Sbjct 121 LAPNQEWRTVWDSAIDRAELGEGIESRFTGTVSYYDTPEEPKGW-FGRGKRTRYENKVTL 179
Query 185 DWDALPPVARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAA 244
DW LPPV R+ELMTTHDLAKREKQKLELLRSLL+YFHYASKETRPDVFR+EI+RIN AA
Sbjct 180 DWGDLPPVRRVELMTTHDLAKREKQKLELLRSLLSYFHYASKETRPDVFRAEIERINGAA 239
Query 245 AETQDRWRARQ 255
E QDR R R+
Sbjct 240 REIQDRLRGRE 250
>gi|118471537|ref|YP_885722.1| hypothetical protein MSMEG_1332 [Mycobacterium smegmatis str.
MC2 155]
gi|118172824|gb|ABK73720.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=285
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/242 (51%), Positives = 163/242 (68%), Gaps = 6/242 (2%)
Query 14 EVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWH 73
E+ D GTW A AAW AL + V+ALV RQ + + AE T+P V+MFMEP +DWH
Sbjct 13 ELAEFDPGTWTALAAWVALAVTVIALVYAWRQYLKAKERRAELTQPNVSMFMEPSSSDWH 72
Query 74 VIELVVRNFGRTAAYDVRFSFPNPPTVAQYENA-ANGYADVVELRLPQELPMLAPGQEWR 132
++ELVVRN+G+ AY +RF F NPPTV +YE++ + + D+ L LP E+P LAP QEWR
Sbjct 73 LVELVVRNYGQRPAYGLRFEFANPPTVGKYESSYDDNFVDITPLNLPAEIPYLAPNQEWR 132
Query 133 MVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVLDWDALPPV 192
+VWDSALDR ++G I SRF G +TYYD P + + R VLDW LPPV
Sbjct 133 IVWDSALDRKQLGEAIASRFDGAITYYDEPPEN-----GKPSGRKFRNTAVLDWATLPPV 187
Query 193 ARIELMTTHDLAKREKQKLELLRSLLTYFHYASKETRPDVFRSEIDRINRAAAETQDRWR 252
R+EL+TTHD A++EKQKLELLR++L Y+ YA+KET R+EI+R+ E ++RWR
Sbjct 188 DRMELLTTHDRARQEKQKLELLRAVLAYYQYAAKETDEQTLRTEINRVKALGNEVRERWR 247
Query 253 AR 254
+R
Sbjct 248 SR 249
>gi|289568570|ref|ZP_06448797.1| hypothetical exported protein [Mycobacterium tuberculosis T17]
gi|289542324|gb|EFD45972.1| hypothetical exported protein [Mycobacterium tuberculosis T17]
Length=132
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/128 (77%), Positives = 100/128 (79%), Gaps = 2/128 (1%)
Query 152 FPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVLDWDALPPVARIELMTTHDLAKREKQKL 211
PG YYDRP G ++ L A VARIELMTTHDLAKREKQKL
Sbjct 7 LPGHGDYYDRPSSAPMRSGGADGVVGDQSGAGLGCPAA--VARIELMTTHDLAKREKQKL 64
Query 212 ELLRSLLTYFHYASKETRPDVFRSEIDRINRAAAETQDRWRARQVEVPTEVSQRSEGQGP 271
ELLRSLLTYFHYASKETRPDVFRSEIDRINRAAAETQDRWRARQVEVPTEVSQRSEGQGP
Sbjct 65 ELLRSLLTYFHYASKETRPDVFRSEIDRINRAAAETQDRWRARQVEVPTEVSQRSEGQGP 124
Query 272 QPTRIPAG 279
QPTRIPAG
Sbjct 125 QPTRIPAG 132
>gi|183983568|ref|YP_001851859.1| hypothetical protein MMAR_3588 [Mycobacterium marinum M]
gi|183176894|gb|ACC42004.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=198
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (31%), Positives = 67/125 (54%), Gaps = 1/125 (0%)
Query 38 ALVVTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNP 97
ALV + Q++ R T+P V ++++ + ++ ++ VV+NFG T AY +R +
Sbjct 24 ALVYARGQVREARETRERVTQPNVVVYIDHNPKNFQYLDFVVKNFGETPAYSIRVTLARL 83
Query 98 PTVAQYENAANGYADVVELRLPQELPMLAPGQEWRMVWDSALDRAEIGRGIESR-FPGTV 156
+ N V EL +P+ + +LAPGQEWR +WDSA+ R + + G V
Sbjct 84 DVSPYHNNITGEDVGVTELAVPEHIAVLAPGQEWRSLWDSAVKRKQHSDELSDEPVLGHV 143
Query 157 TYYDR 161
+++D+
Sbjct 144 SFWDK 148
>gi|116669565|ref|YP_830498.1| hypothetical protein Arth_1001 [Arthrobacter sp. FB24]
gi|116609674|gb|ABK02398.1| hypothetical protein Arth_1001 [Arthrobacter sp. FB24]
Length=309
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/187 (28%), Positives = 86/187 (46%), Gaps = 19/187 (10%)
Query 20 SGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMFME-PHVADWHVIELV 78
+G W A+ + L + VA RQ+ R L EQ +PYVA +++ + D+ + V
Sbjct 54 AGEWQAFGSVGTLLVAAVAAGFAWRQVNEARALRREQAQPYVAAYLDVNNEVDFSFMTFV 113
Query 79 VRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELPMLAPGQEWRMVWDSA 138
++NFG+TAA+D+R S +PP + AN L + + L P QEW+ ++D A
Sbjct 114 IKNFGQTAAHDIRISI-DPPMKRAWGKVANPE----PLDVASTITTLVPRQEWKTLFDWA 168
Query 139 LDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVVLDWDALPPVARIELM 198
R + + + + Y D G+ +DW+ + +I +
Sbjct 169 PHR--LAAKLYDVYKVKIQYKD-----------SHGKEMAAATFTIDWNQYRTMRKIGVK 215
Query 199 TTHDLAK 205
TTHD+ K
Sbjct 216 TTHDIGK 222
>gi|260430752|ref|ZP_05784724.1| phosphonate monoester hydrolase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260418193|gb|EEX11451.1| phosphonate monoester hydrolase [Silicibacter lacuscaerulensis
ITI-1157]
Length=511
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/60 (42%), Positives = 32/60 (54%), Gaps = 5/60 (8%)
Query 82 FGRT-AAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELP----MLAPGQEWRMVWD 136
FG T + D R PN P V YEN NG+ +VVE+RL + P +L G E+ WD
Sbjct 99 FGYTDTSADPRVHHPNDPAVKTYENPMNGFHEVVEMRLEESFPWQSHLLRKGYEFDDYWD 158
>gi|167648439|ref|YP_001686102.1| hypothetical protein Caul_4484 [Caulobacter sp. K31]
gi|167350869|gb|ABZ73604.1| hypothetical protein Caul_4484 [Caulobacter sp. K31]
Length=237
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/142 (27%), Positives = 61/142 (43%), Gaps = 16/142 (11%)
Query 41 VTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTV 100
VTK +R+A +RP + +EP+ +LV+ N G A+D+ F +PP
Sbjct 33 VTKVLAIETKRMADANSRPQIVATLEPNQWSLRHADLVIANTGNATAFDIGIQF-DPPI- 90
Query 101 AQYENAANGYADVVELRLP-QELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYY 159
ANG A E+ +P Q + +L PGQ +E G +E F ++ +
Sbjct 91 ------ANGEARGDEMPIPLQNISVLKPGQSISSYL------SEFGPLLEISFSVSIEWL 138
Query 160 DRPEQPRRWRF-WRRGRRPLET 180
P R + + RP+ +
Sbjct 139 TDPSSKERGKITYTLDMRPIAS 160
>gi|300115361|ref|YP_003761936.1| hypothetical protein Nwat_2868 [Nitrosococcus watsonii C-113]
gi|299541298|gb|ADJ29615.1| hypothetical protein Nwat_2868 [Nitrosococcus watsonii C-113]
Length=216
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/121 (24%), Positives = 57/121 (48%), Gaps = 3/121 (2%)
Query 18 VDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIEL 77
+D + L W+ W +V ++T ++ R + A + P V + + +++L
Sbjct 5 LDIASALDWSDWITAIATLVLAILTFIYVRLTRSILATPSDPCVVLTVVHDEERVSILQL 64
Query 78 VVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELR---LPQELPMLAPGQEWRMV 134
V +N G A ++RF F +P + A + + VE++ L + +P L PG+ R+
Sbjct 65 VAKNIGTGLATEIRFEFNHPVPDRAWGVAESDAKEAVEMKHGPLIEGIPALGPGETRRID 124
Query 135 W 135
W
Sbjct 125 W 125
>gi|220910946|ref|YP_002486255.1| hypothetical protein Achl_0163 [Arthrobacter chlorophenolicus
A6]
gi|219857824|gb|ACL38166.1| hypothetical protein Achl_0163 [Arthrobacter chlorophenolicus
A6]
Length=210
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/121 (28%), Positives = 58/121 (48%), Gaps = 7/121 (5%)
Query 37 VALVVTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPN 96
+A V +Q + +++A + +PYV + M P ++ L+V N G T A DV F
Sbjct 30 IAAVAAYKQTRLQKQIAEDAAQPYVWVDMRPDTKQGGLLNLIVGNSGPTVATDVTVGF-E 88
Query 97 PPTVAQYENAANGYADVVELRLPQELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTV 156
PP +E+ A +V L + +P L PG+ +VW+ + +G R+ T+
Sbjct 89 PPLQMPFEDEAGHALEV----LRRGIPSLPPGRT--LVWNLGVAWQIVGADSPKRYKLTI 142
Query 157 T 157
+
Sbjct 143 S 143
>gi|120536867|ref|YP_956925.1| hypothetical protein Maqu_4157 [Marinobacter aquaeolei VT8]
gi|120326701|gb|ABM21010.1| hypothetical protein Maqu_4157 [Marinobacter aquaeolei VT8]
Length=207
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/146 (27%), Positives = 65/146 (45%), Gaps = 9/146 (6%)
Query 30 AALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYD 89
+A + +VA++V + L + P+V ++ +P + VI L++ N GR+AA+D
Sbjct 4 SAFIVSLVAVIVATTSTLISYLLFRDAKDPHVVVYADPDLKRPSVINLIIENTGRSAAWD 63
Query 90 VRFSFPNP-PTVAQYENAANGYADVVELRLPQELPMLAPGQEWRMVWDSALDRAEIGRGI 148
V F P P A A A + + +P PG + + W D I +GI
Sbjct 64 VTFQSTKPVPQEAFGIERAPKPAQMNRGPIVNGIPCFGPGSKRVITW-GQFD--GIRQGI 120
Query 149 ESRFPG-TVTYYDRPEQPRRWRFWRR 173
+ + T TY +P FW+R
Sbjct 121 DGDYLDITATYRSQPS----LAFWKR 142
>gi|71278509|ref|YP_266959.1| hypothetical protein CPS_0191 [Colwellia psychrerythraea 34H]
gi|71144249|gb|AAZ24722.1| hypothetical protein CPS_0191 [Colwellia psychrerythraea 34H]
Length=289
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/95 (29%), Positives = 47/95 (50%), Gaps = 9/95 (9%)
Query 20 SGTWLAW-AAWAALGLGVVALVVTKR-------QIQRNRRLAAEQTRPYVAMFMEPHVAD 71
S + +W AA A + + V+ ++ K QI++ + E RP V + ++P +
Sbjct 45 SDSLSSWVAAIATVSIAVLTFILAKETWHLRNAQIEQLNEIKKESMRPNVVVNVQPSMVS 104
Query 72 WHVIELVVRNFGRTAAYDVRFSFPN-PPTVAQYEN 105
++V++N G+ A +V F F N TVA EN
Sbjct 105 ISFWDVVIQNLGKGIAQNVNFEFKNIDGTVATDEN 139
>gi|330825256|ref|YP_004388559.1| hypothetical protein Alide2_2687 [Alicycliphilus denitrificans
K601]
gi|329310628|gb|AEB85043.1| hypothetical protein Alide2_2687 [Alicycliphilus denitrificans
K601]
Length=457
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/112 (29%), Positives = 52/112 (47%), Gaps = 14/112 (12%)
Query 55 EQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYE-NAANGYADV 113
+ ++P + + +P +IELV+ N G A D++FS P P + Y A +G+
Sbjct 260 KNSQPQIVAYYQPSERQQSIIELVIENVGTGNATDIKFSKPIP--IGWYGIEAPSGHGSY 317
Query 114 VELRLPQELPMLAPGQEWRMVWDSALDRA---EIGRGIESRFPGTVTYYDRP 162
+ +P+LAPGQ R+V+ E+G G P +TY P
Sbjct 318 IPT---SGIPLLAPGQ--RLVFHGGQFGGLAKELGAG---GLPLDITYKFNP 361
>gi|271963381|ref|YP_003337577.1| hypothetical protein Sros_1846 [Streptosporangium roseum DSM
43021]
gi|270506556|gb|ACZ84834.1| hypothetical protein Sros_1846 [Streptosporangium roseum DSM
43021]
Length=249
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/196 (23%), Positives = 79/196 (41%), Gaps = 24/196 (12%)
Query 32 LGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVR 91
+ LG L V RQ++ +++ EQ PY+ + ++P +V+ N G T A +V+
Sbjct 57 VALGKDQLDVALRQLELEQQVRREQQEPYIVVDIQPSAFVSKAFLIVIENIGPTVARNVQ 116
Query 92 FSFPNPPTVAQYENAANGYADVV---ELRLPQELPMLAPGQEWRMVWDSALDRAEIGRGI 148
F P + ++ + +G V +P + PG+ +++D R +
Sbjct 117 IKF--DPEIERFMD-TDGMGIFVLAESFLFKNGIPAMPPGRRIELLFDFGYKR------L 167
Query 149 ESRFPGTVTYYDRPEQPRRWRFWRRGRRPLETKVV-LDWDALPPVARIELMTTHDLAKRE 207
S P T E P G RP+ET +D ++ + HD K
Sbjct 168 NSDLPKEYTVTVDCEGP--------GGRPVETMTYKIDLRIYEGTEQLTVKNMHDGVKAL 219
Query 208 KQ---KLELLRSLLTY 220
+ +L +R LL Y
Sbjct 220 ENVTDELAGIRKLLPY 235
>gi|210634737|ref|ZP_03298265.1| hypothetical protein COLSTE_02190 [Collinsella stercoris DSM
13279]
gi|210158677|gb|EEA89648.1| hypothetical protein COLSTE_02190 [Collinsella stercoris DSM
13279]
Length=178
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/134 (30%), Positives = 58/134 (44%), Gaps = 24/134 (17%)
Query 59 PYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYENAANGYADVVELRL 118
P V ++ E + D + ELV +NFG AYDVR N + + Y D V+
Sbjct 36 PDVMVYFEAN-KDDGITELVTKNFGIGVAYDVRIDGFNVGVIQK------EYQDNVKQTF 88
Query 119 PQE-LPMLAPGQEWRMVW---DSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRG 174
Q +PML PG E R + D A D ++ V++ RR F R
Sbjct 89 VQNGIPMLVPGAERRTIVFENDWAKDALR-----TTQMTVQVSF------ERRSLF--RT 135
Query 175 RRPLETKVVLDWDA 188
RR + +LD+D+
Sbjct 136 RRKMSMSCILDYDS 149
>gi|257884221|ref|ZP_05663874.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|293570343|ref|ZP_06681402.1| conserved hypothetical protein [Enterococcus faecium E980]
gi|257820059|gb|EEV47207.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|291609589|gb|EFF38852.1| conserved hypothetical protein [Enterococcus faecium E980]
Length=175
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query 20 SGTWL-AWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIELV 78
S W+ A L + V+++V + R I+ + E RPYV+ +++ + LV
Sbjct 3 SSDWIQVIAICLTLIVSVISIVQSNRSIKLTEKTIEESNRPYVSAYVDIIDTTFFAKYLV 62
Query 79 VRNFGRTAAYDVRFSF 94
++NFG T A + +F
Sbjct 63 LKNFGNTMATISKLTF 78
>gi|325958873|ref|YP_004290339.1| hypothetical protein Metbo_1122 [Methanobacterium sp. AL-21]
gi|325330305|gb|ADZ09367.1| hypothetical protein Metbo_1122 [Methanobacterium sp. AL-21]
Length=340
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/128 (23%), Positives = 61/128 (48%), Gaps = 12/128 (9%)
Query 41 VTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTV 100
V++ +Q + ++ PYV + E + +I L+V N G+ A DV+ F +P +
Sbjct 48 VSQLTLQEMKETRDQEIAPYVVAYFE---FENRIINLIVENVGKGLAKDVKIKF-DPKLI 103
Query 101 AQYENAANGYADVVELRLPQE-LPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYY 159
+ G+ D+ E+ +E + + P + + +DS + I + +++ +TYY
Sbjct 104 SSI-----GH-DINEIAFIKEGIGSMPPKYKIKTFFDSTIGYYGI-KNFPNKYNAKITYY 156
Query 160 DRPEQPRR 167
E+ +R
Sbjct 157 GGLEESKR 164
>gi|229199664|ref|ZP_04326309.1| hypothetical protein bcere0001_51470 [Bacillus cereus m1293]
gi|228583810|gb|EEK41983.1| hypothetical protein bcere0001_51470 [Bacillus cereus m1293]
Length=174
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/133 (21%), Positives = 56/133 (43%), Gaps = 22/133 (16%)
Query 9 LSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMFMEPH 68
+S W +++G+ T +A + ++ + + ++ R+ E RPYV F+
Sbjct 3 ISDWIQISGIIVSTLVA----------ITSIFIALKSLKLTRKSIEEANRPYVTCFVSAI 52
Query 69 VADWHVIELVVRNFGRTAAYDVRFSFPNP-PTVAQYENAANGYADVVELRLPQELPMLAP 127
+ +++NFG++ A + F P + + NG D + L +AP
Sbjct 53 DTGFQAKYFIIKNFGKSGARIINIEFNKSLPDLGR-----NGTIDSITNSL------IAP 101
Query 128 GQEWRMVWDSALD 140
Q++ S +D
Sbjct 102 NQKFMTAVPSEMD 114
>gi|32419264|gb|AAN85152.1| unknown [Pseudomonas syringae pv. syringae]
Length=243
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/93 (30%), Positives = 44/93 (48%), Gaps = 9/93 (9%)
Query 41 VTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTV 100
VTK + R+ +P++ + P+ +LVV N G AYD+R F +PP
Sbjct 33 VTKLLAKETTRMVEASDQPHIVSTLIPNRWSLRHYDLVVDNTGNATAYDIRIVF-DPP-- 89
Query 101 AQYENAANGYADVVELRLP-QELPMLAPGQEWR 132
NG A + ++P +++ +L PGQ R
Sbjct 90 -----LENGEARKNDAKIPFEKISVLKPGQGLR 117
>gi|300115218|ref|YP_003761793.1| hypothetical protein Nwat_2704 [Nitrosococcus watsonii C-113]
gi|299541155|gb|ADJ29472.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length=274
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/148 (25%), Positives = 65/148 (44%), Gaps = 12/148 (8%)
Query 5 MGWVLSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKR-------QIQRNRRLAAEQT 57
+G + E+T +W+A A A + + V+ ++ QI++ L E
Sbjct 30 LGPSFQAQLELTADSISSWVA--ALATVAIAVLTFILAMETWRLRAAQIEQIEELRREAL 87
Query 58 RPYVAMFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPPTVAQYE-NAANGYADVVEL 116
RP V ++ P A + I + + N G+ AA +++F P + + E N A ++ L
Sbjct 88 RPNVEFYLLPAPASFQFINVHIENNGKGAAKNIKFDIK-PDAIGENEKNERQLIAQLLSL 146
Query 117 R-LPQELPMLAPGQEWRMVWDSALDRAE 143
L + L G+E R S ++ AE
Sbjct 147 NMLYNGIVSLGSGKERRSFVFSFIEYAE 174
>gi|296119298|ref|ZP_06837866.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295967690|gb|EFG80947.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
Length=225
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (30%), Positives = 44/78 (57%), Gaps = 3/78 (3%)
Query 34 LGVVALVVTKRQIQRNRRLAAEQTRP-YVAMFMEPHVADWHVIELVVRNFGRTAAYDVRF 92
+ +V+L+V +R ++ NR++ RP +A + P A + L+V N G++ A +V+
Sbjct 27 IALVSLLVARRSLRLNRQININANRPMMMAQILMPDYAK-ETLRLMVSNRGKSVAKNVKV 85
Query 93 SF-PNPPTVAQYENAANG 109
+F P+ P+ + AA G
Sbjct 86 TFEPDLPSTTEQNGAAVG 103
>gi|193214160|ref|YP_001995359.1| type 11 methyltransferase [Chloroherpeton thalassium ATCC 35110]
gi|193087637|gb|ACF12912.1| Methyltransferase type 11 [Chloroherpeton thalassium ATCC 35110]
Length=292
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/85 (36%), Positives = 42/85 (50%), Gaps = 8/85 (9%)
Query 16 TGVDSGTWLAWAAWAALGLGVVALVVTKRQIQRNRRLAAEQTRPYVAMFMEPHVADWHVI 75
G GT+ +A LG VVA+ V+ I+R R+ +T P +A + VADWH I
Sbjct 77 VGCGPGTYAI--PFAKLGAEVVAIDVSSAMIERLRK----ETPPELAGKISSIVADWHDI 130
Query 76 ELVVRNFGRTAAYDVRFSFPNPPTV 100
+L R G A+D F+ P T
Sbjct 131 DLRAR--GLMHAFDFVFARMTPATT 153
>gi|336397761|ref|ZP_08578561.1| hypothetical protein Premu_0658 [Prevotella multisaccharivorax
DSM 17128]
gi|336067497|gb|EGN56131.1| hypothetical protein Premu_0658 [Prevotella multisaccharivorax
DSM 17128]
Length=407
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/81 (35%), Positives = 34/81 (42%), Gaps = 6/81 (7%)
Query 90 VRFSFPNPPTVAQYENAANGYADVVELRLPQELPMLAPGQEWRMVWDSALDRAEIGRGIE 149
VR + NPP + + A Y D + RL QE P PG+ AL A R
Sbjct 302 VRLLYANPP---KGQKAKAVYIDTIIDRLMQEYPYWTPGEHVNQDVGFALQEAGFTR--- 355
Query 150 SRFPGTVTYYDRPEQPRRWRF 170
SR G Y P PRR+ F
Sbjct 356 SRIHGRSCYRIIPRDPRRFDF 376
>gi|254474644|ref|ZP_05088030.1| phosphonate monoester hydrolase [Ruegeria sp. R11]
gi|214028887|gb|EEB69722.1| phosphonate monoester hydrolase [Ruegeria sp. R11]
Length=519
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query 82 FGRT-AAYDVRFSFPNPPTVAQYENAANGYADVVELRLPQELP----MLAPGQEWRMVWD 136
FG T ++D R PN PTV YE G+ +++E+RL P +L G + WD
Sbjct 103 FGYTDTSHDPRVHHPNDPTVRTYEYPMAGFQEMLEMRLEMSHPWRAHLLGKGYTFDSYWD 162
>gi|315501687|ref|YP_004080574.1| hypothetical protein ML5_0881 [Micromonospora sp. L5]
gi|315408306|gb|ADU06423.1| hypothetical protein ML5_0881 [Micromonospora sp. L5]
Length=232
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 43/178 (25%), Positives = 69/178 (39%), Gaps = 32/178 (17%)
Query 9 LSSWHEVTGVDSGTWLAWAAWAALGLGVVALVVTKR------QIQRNRRLAAEQTRPYVA 62
+S+ +T + + A AAL G A+ T + Q+ ++ +Q +PYV
Sbjct 1 MSTLEAITLLVAIISALTAVVAALFAGSQAVAATHQARYAQAQLSLAEQVRKDQAQPYVF 60
Query 63 MFMEPHVADWHVIELVVRNFGRTAAYDVRFSFPNPP--TVAQYENAANGYADVVELRLPQ 120
+ P D + LVV N G T A ++R +F +PP +VA
Sbjct 61 ADLRPDEQDPVKVMLVVHNTGSTVAKNIRVTF-DPPLSSVA------------------- 100
Query 121 ELPMLAPGQEWRMVWDSALDRAEIGRGIESRFPGTVTYYDRPEQPRRWRFWRRGRRPL 178
+P A E V A+ GR ++ F + +D P PRR+ P
Sbjct 101 -MPDFAAEME---VLRGAIATLPPGRAVKWFFDISFQLFDTPNAPRRYTVTVNADGPF 154
Lambda K H
0.321 0.134 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 439663874064
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40