BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0634A
Length=83
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840036|ref|NP_335073.1| hypothetical protein MT0662.1 [Myco... 171 5e-41
gi|340625652|ref|YP_004744104.1| hypothetical protein MCAN_06321... 169 1e-40
gi|289760758|ref|ZP_06520136.1| conserved hypothetical protein [... 162 1e-38
gi|167969063|ref|ZP_02551340.1| hypothetical protein MtubH3_1395... 142 1e-32
gi|15828026|ref|NP_302289.1| hypothetical protein ML1911A [Mycob... 87.0 8e-16
gi|296168422|ref|ZP_06850302.1| conserved hypothetical protein [... 84.0 7e-15
gi|41410203|ref|NP_963039.1| hypothetical protein MAP4105 [Mycob... 84.0 7e-15
gi|118616508|ref|YP_904840.1| hypothetical protein MUL_0716 [Myc... 83.6 8e-15
gi|183980986|ref|YP_001849277.1| hypothetical protein MMAR_0966 ... 83.2 1e-14
gi|240169407|ref|ZP_04748066.1| hypothetical protein MkanA1_0884... 82.4 2e-14
gi|118465705|ref|YP_883662.1| hypothetical protein MAV_4531 [Myc... 80.1 9e-14
gi|342858868|ref|ZP_08715522.1| hypothetical protein MCOL_08328 ... 75.9 2e-12
gi|254823023|ref|ZP_05228024.1| hypothetical protein MintA_24049... 73.9 7e-12
gi|118465333|ref|YP_880567.1| hypothetical protein MAV_1323 [Myc... 53.5 1e-05
gi|336458663|gb|EGO37625.1| hypothetical protein (DUF2191) [Myco... 53.1 1e-05
gi|31793189|ref|NP_855682.1| hypothetical protein Mb2032 [Mycoba... 42.4 0.024
gi|167970462|ref|ZP_02552739.1| hypothetical protein MtubH3_2149... 41.6 0.043
gi|15609146|ref|NP_216525.1| hypothetical protein Rv2009 [Mycoba... 41.2 0.052
gi|333989208|ref|YP_004521822.1| hypothetical protein JDM601_056... 39.7 0.15
gi|15608698|ref|NP_216076.1| hypothetical protein Rv1560 [Mycoba... 39.3 0.17
gi|336179604|ref|YP_004584979.1| hypothetical protein FsymDg_378... 39.3 0.18
gi|345302429|ref|YP_004824331.1| hypothetical protein Rhom172_05... 38.9 0.25
gi|297563900|ref|YP_003682873.1| Protein of unknown function DUF... 38.5 0.33
gi|268316119|ref|YP_003289838.1| hypothetical protein Rmar_0549 ... 37.7 0.53
gi|167967386|ref|ZP_02549663.1| hypothetical protein MtubH3_0485... 37.4 0.80
gi|296166367|ref|ZP_06848802.1| toxin-antitoxin system [Mycobact... 37.4 0.83
gi|284990201|ref|YP_003408755.1| hypothetical protein Gobs_1668 ... 37.0 0.89
gi|289761723|ref|ZP_06521101.1| conserved hypothetical protein [... 36.6 1.2
gi|312115922|ref|YP_004013518.1| hypothetical protein Rvan_3224 ... 35.0 4.0
>gi|15840036|ref|NP_335073.1| hypothetical protein MT0662.1 [Mycobacterium tuberculosis CDC1551]
gi|31791817|ref|NP_854310.1| hypothetical protein Mb0652 [Mycobacterium bovis AF2122/97]
gi|57116763|ref|YP_177629.1| hypothetical protein Rv0634A [Mycobacterium tuberculosis H37Rv]
40 more sequence titles
Length=83
Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/83 (99%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
Query 1 LGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG 60
+GSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG
Sbjct 1 MGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG 60
Query 61 HDDEYDEFSDPNAWVPRRSRDTG 83
HDDEYDEFSDPNAWVPRRSRDTG
Sbjct 61 HDDEYDEFSDPNAWVPRRSRDTG 83
>gi|340625652|ref|YP_004744104.1| hypothetical protein MCAN_06321 [Mycobacterium canettii CIPT
140010059]
gi|340003842|emb|CCC42972.1| hypothetical protein MCAN_06321 [Mycobacterium canettii CIPT
140010059]
Length=83
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/83 (98%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
Query 1 LGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG 60
+GSDCGCGGYLWSMLKRVEIEVDDDLIQ+VIRRYRVKGAREAVNLALRTLLGEADTAEHG
Sbjct 1 MGSDCGCGGYLWSMLKRVEIEVDDDLIQEVIRRYRVKGAREAVNLALRTLLGEADTAEHG 60
Query 61 HDDEYDEFSDPNAWVPRRSRDTG 83
HDDEYDEFSDPNAWVPRRSRDTG
Sbjct 61 HDDEYDEFSDPNAWVPRRSRDTG 83
>gi|289760758|ref|ZP_06520136.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289708264|gb|EFD72280.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=94
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/79 (99%), Positives = 79/79 (100%), Gaps = 0/79 (0%)
Query 1 LGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG 60
+GSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG
Sbjct 1 MGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG 60
Query 61 HDDEYDEFSDPNAWVPRRS 79
HDDEYDEFSDPNAWVPRRS
Sbjct 61 HDDEYDEFSDPNAWVPRRS 79
>gi|167969063|ref|ZP_02551340.1| hypothetical protein MtubH3_13957 [Mycobacterium tuberculosis
H37Ra]
gi|254230967|ref|ZP_04924294.1| hypothetical protein TBCG_00629 [Mycobacterium tuberculosis C]
gi|254549593|ref|ZP_05140040.1| hypothetical protein Mtube_03880 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
30 more sequence titles
Length=70
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/70 (100%), Positives = 70/70 (100%), Gaps = 0/70 (0%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 73
MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA
Sbjct 1 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 60
Query 74 WVPRRSRDTG 83
WVPRRSRDTG
Sbjct 61 WVPRRSRDTG 70
>gi|15828026|ref|NP_302289.1| hypothetical protein ML1911A [Mycobacterium leprae TN]
gi|221230503|ref|YP_002503919.1| hypothetical protein MLBr_01911A [Mycobacterium leprae Br4923]
gi|25397670|pir||B87148 conserved hypothetical protein ML1911A [imported] - Mycobacterium
leprae
gi|13093579|emb|CAC30866.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933610|emb|CAR72008.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=71
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/71 (65%), Positives = 54/71 (77%), Gaps = 1/71 (1%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG-HDDEYDEFSDPN 72
MLK+VEIEVDDDL+Q+VIRRY + G REAV+LAL+ LLGE D EYDEFS+P+
Sbjct 1 MLKKVEIEVDDDLVQEVIRRYGLLGRREAVHLALKALLGEPGVGGLSEQDPEYDEFSNPD 60
Query 73 AWVPRRSRDTG 83
AW RRS DTG
Sbjct 61 AWRTRRSSDTG 71
>gi|296168422|ref|ZP_06850302.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896716|gb|EFG76351.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=69
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/68 (67%), Positives = 52/68 (77%), Gaps = 2/68 (2%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 73
M+K+VEIEVD DLI + +RR+ + AREAVNLALRTLL EADT E G +EYDEFSD A
Sbjct 1 MIKKVEIEVDVDLIDEAVRRFHLADAREAVNLALRTLLTEADTGEPG--EEYDEFSDLRA 58
Query 74 WVPRRSRD 81
W PRR D
Sbjct 59 WQPRRGGD 66
>gi|41410203|ref|NP_963039.1| hypothetical protein MAP4105 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399037|gb|AAS06655.1| hypothetical protein MAP_4105 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=76
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/76 (57%), Positives = 55/76 (73%), Gaps = 2/76 (2%)
Query 8 GGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDE 67
GY M K+VEIEVD +L+ + IRR+ + AREAVNLALRTLL E D+ +DEYDE
Sbjct 3 SGYCCRMRKKVEIEVDLELVDEAIRRFHLADAREAVNLALRTLLHEGDSV--ASEDEYDE 60
Query 68 FSDPNAWVPRRSRDTG 83
FSD +AW PRR+ ++G
Sbjct 61 FSDLSAWQPRRNAESG 76
>gi|118616508|ref|YP_904840.1| hypothetical protein MUL_0716 [Mycobacterium ulcerans Agy99]
gi|118568618|gb|ABL03369.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=69
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/70 (62%), Positives = 53/70 (76%), Gaps = 1/70 (1%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 73
MLK+VEIE+DDDL+Q+ IRRYR+ G RE V+LALRTLL EA + G DDEYDEFSD +
Sbjct 1 MLKKVEIEIDDDLVQEAIRRYRLAGPREVVHLALRTLLAEA-GEKGGGDDEYDEFSDLSV 59
Query 74 WVPRRSRDTG 83
W P + +G
Sbjct 60 WDPHKGGRSG 69
>gi|183980986|ref|YP_001849277.1| hypothetical protein MMAR_0966 [Mycobacterium marinum M]
gi|183174312|gb|ACC39422.1| conserved protein [Mycobacterium marinum M]
Length=69
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/70 (62%), Positives = 52/70 (75%), Gaps = 1/70 (1%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 73
MLK+VEIE+DDDL+Q+ IRRYR+ G RE V+LALRTLL EA G DDEYDEFSD +
Sbjct 1 MLKKVEIEIDDDLVQEAIRRYRLAGPREVVHLALRTLLAEA-GENGGGDDEYDEFSDLSV 59
Query 74 WVPRRSRDTG 83
W P + +G
Sbjct 60 WDPHKGGRSG 69
>gi|240169407|ref|ZP_04748066.1| hypothetical protein MkanA1_08843 [Mycobacterium kansasii ATCC
12478]
Length=86
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/76 (57%), Positives = 53/76 (70%), Gaps = 1/76 (1%)
Query 8 GGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDE 67
GGY W M K+VEIE+DDDL+Q+ IRRY + AREAV+LALRTLL E + E ++EYDE
Sbjct 12 GGYCWRMRKKVEIEIDDDLVQEAIRRYGLADAREAVHLALRTLLAEGGSGE-ADEEEYDE 70
Query 68 FSDPNAWVPRRSRDTG 83
FSD + P R G
Sbjct 71 FSDLSVLDPHRGHRGG 86
>gi|118465705|ref|YP_883662.1| hypothetical protein MAV_4531 [Mycobacterium avium 104]
gi|254776964|ref|ZP_05218480.1| hypothetical protein MaviaA2_20166 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118166992|gb|ABK67889.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336460575|gb|EGO39468.1| hypothetical protein (DUF2191) [Mycobacterium avium subsp. paratuberculosis
S397]
Length=68
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/70 (59%), Positives = 53/70 (76%), Gaps = 2/70 (2%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 73
M K+VEIEVD +L+ + IRR+ + AREAVNLALRTLL E D+ +DEYDEFSD +A
Sbjct 1 MRKKVEIEVDLELVDEAIRRFHLADAREAVNLALRTLLHEGDSV--ASEDEYDEFSDLSA 58
Query 74 WVPRRSRDTG 83
W PRR+ ++G
Sbjct 59 WQPRRNAESG 68
>gi|342858868|ref|ZP_08715522.1| hypothetical protein MCOL_08328 [Mycobacterium colombiense CECT
3035]
gi|342133109|gb|EGT86312.1| hypothetical protein MCOL_08328 [Mycobacterium colombiense CECT
3035]
Length=69
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/66 (61%), Positives = 49/66 (75%), Gaps = 2/66 (3%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 73
M K+VEIEVD DL+ + IRR+ + AREAVNLALRTLL + D+ E DD YDEFSD +A
Sbjct 1 MKKKVEIEVDVDLVDEAIRRFHLLDAREAVNLALRTLLHDGDSVE--QDDAYDEFSDLSA 58
Query 74 WVPRRS 79
W P R+
Sbjct 59 WQPHRN 64
>gi|254823023|ref|ZP_05228024.1| hypothetical protein MintA_24049 [Mycobacterium intracellulare
ATCC 13950]
Length=68
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/70 (68%), Positives = 54/70 (78%), Gaps = 2/70 (2%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 73
M K+VEIEVD DL+ + I+R+RV AREAVNLALRTLL E A +DEYDEFSD NA
Sbjct 1 MRKKVEIEVDLDLVDEAIQRFRVADAREAVNLALRTLLREG--ASDEEEDEYDEFSDLNA 58
Query 74 WVPRRSRDTG 83
W PRRSR+TG
Sbjct 59 WRPRRSRETG 68
>gi|118465333|ref|YP_880567.1| hypothetical protein MAV_1323 [Mycobacterium avium 104]
gi|254774198|ref|ZP_05215714.1| hypothetical protein MaviaA2_05925 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118166620|gb|ABK67517.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=67
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/61 (55%), Positives = 38/61 (63%), Gaps = 5/61 (8%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 73
M K VEIEVD ++I IRR+ + AREAVNLALRTL+ D A GH D EF D
Sbjct 1 MKKTVEIEVDVNMIDDAIRRFHLADAREAVNLALRTLI---DDAGPGHHD--GEFGDLGP 55
Query 74 W 74
W
Sbjct 56 W 56
>gi|336458663|gb|EGO37625.1| hypothetical protein (DUF2191) [Mycobacterium avium subsp. paratuberculosis
S397]
Length=67
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/61 (55%), Positives = 38/61 (63%), Gaps = 5/61 (8%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA 73
M K VEIEVD ++I IRR+ + AREAVNLALRTL+ D A GH D EF D
Sbjct 1 MKKTVEIEVDVNMIDDAIRRFHLADAREAVNLALRTLI---DDAGPGHHD--GEFGDLGP 55
Query 74 W 74
W
Sbjct 56 W 56
>gi|31793189|ref|NP_855682.1| hypothetical protein Mb2032 [Mycobacterium bovis AF2122/97]
gi|121637893|ref|YP_978116.1| hypothetical protein BCG_2026 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990387|ref|YP_002645074.1| hypothetical protein JTY_2021 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31618781|emb|CAD96885.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493540|emb|CAL72014.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773500|dbj|BAH26306.1| hypothetical protein JTY_2021 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601930|emb|CCC64604.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=80
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/69 (40%), Positives = 37/69 (54%), Gaps = 10/69 (14%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEA-----DTAEHG-----HDD 63
++ R IE+DD+L+ R YR+ R AV+LALR L+GE A G DD
Sbjct 5 VVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSDD 64
Query 64 EYDEFSDPN 72
E + FSD +
Sbjct 65 EIESFSDTD 73
>gi|167970462|ref|ZP_02552739.1| hypothetical protein MtubH3_21498 [Mycobacterium tuberculosis
H37Ra]
gi|254551032|ref|ZP_05141479.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|308232003|ref|ZP_07414583.2| antitoxin [Mycobacterium tuberculosis SUMu001]
23 more sequence titles
Length=75
Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/39 (49%), Positives = 26/39 (67%), Gaps = 0/39 (0%)
Query 15 LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGE 53
+ R IE+DD+L+ R YR+ R AV+LALR L+GE
Sbjct 1 MSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGE 39
>gi|15609146|ref|NP_216525.1| hypothetical protein Rv2009 [Mycobacterium tuberculosis H37Rv]
gi|15841491|ref|NP_336528.1| hypothetical protein MT2064.1 [Mycobacterium tuberculosis CDC1551]
gi|148661823|ref|YP_001283346.1| hypothetical protein MRA_2025 [Mycobacterium tuberculosis H37Ra]
44 more sequence titles
Length=80
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/40 (48%), Positives = 27/40 (68%), Gaps = 0/40 (0%)
Query 14 MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGE 53
++ R IE+DD+L+ R YR+ R AV+LALR L+GE
Sbjct 5 VVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGE 44
>gi|333989208|ref|YP_004521822.1| hypothetical protein JDM601_0568 [Mycobacterium sp. JDM601]
gi|333485176|gb|AEF34568.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=70
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/45 (45%), Positives = 29/45 (65%), Gaps = 0/45 (0%)
Query 15 LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEH 59
+ R IE+DD+L +V+RR+ V + AV+LALR L+G T E
Sbjct 1 MARTNIEIDDELTAEVMRRFGVTTKKAAVDLALRRLVGAPLTREF 45
>gi|15608698|ref|NP_216076.1| hypothetical protein Rv1560 [Mycobacterium tuberculosis H37Rv]
gi|15841027|ref|NP_336064.1| hypothetical protein MT1611 [Mycobacterium tuberculosis CDC1551]
gi|31792745|ref|NP_855238.1| hypothetical protein Mb1586 [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=72
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query 10 YLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEH 59
Y W M R I++DD+L +V+RR+ + R AV+LALR L+G + E
Sbjct 2 YRWCM-SRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREF 50
>gi|336179604|ref|YP_004584979.1| hypothetical protein FsymDg_3781 [Frankia symbiont of Datisca
glomerata]
gi|334860584|gb|AEH11058.1| Protein of unknown function DUF2191 [Frankia symbiont of Datisca
glomerata]
Length=102
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/39 (52%), Positives = 27/39 (70%), Gaps = 0/39 (0%)
Query 17 RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEAD 55
R I VDD+LI++ +R + V RE V+LALR L+G AD
Sbjct 7 RASIAVDDELIEEAMRLFGVNTRREIVDLALRHLIGRAD 45
>gi|345302429|ref|YP_004824331.1| hypothetical protein Rhom172_0553 [Rhodothermus marinus SG0.5JP17-172]
gi|345111662|gb|AEN72494.1| Protein of unknown function DUF2191 [Rhodothermus marinus SG0.5JP17-172]
Length=70
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/35 (58%), Positives = 26/35 (75%), Gaps = 0/35 (0%)
Query 17 RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLL 51
R IE+DD+L++KV+R +K REAV L LRTLL
Sbjct 2 RTSIEIDDELMRKVLRVTGLKTKREAVELGLRTLL 36
>gi|297563900|ref|YP_003682873.1| Protein of unknown function DUF2191 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848349|gb|ADH70367.1| Protein of unknown function DUF2191 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=73
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/45 (38%), Positives = 28/45 (63%), Gaps = 0/45 (0%)
Query 15 LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEH 59
+ R I++DD+L+ + R++V REAV++ALR +G T E
Sbjct 1 MSRTNIDIDDELVTTAMERFQVSTKREAVDIALRRAVGTPLTKEF 45
>gi|268316119|ref|YP_003289838.1| hypothetical protein Rmar_0549 [Rhodothermus marinus DSM 4252]
gi|262333653|gb|ACY47450.1| conserved hypothetical protein [Rhodothermus marinus DSM 4252]
Length=70
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/35 (55%), Positives = 26/35 (75%), Gaps = 0/35 (0%)
Query 17 RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLL 51
R IE+DD+L++KV+R +K REA+ L LRTLL
Sbjct 2 RTSIEIDDELMRKVLRVTGLKTKREAMELGLRTLL 36
>gi|167967386|ref|ZP_02549663.1| hypothetical protein MtubH3_04852 [Mycobacterium tuberculosis
H37Ra]
gi|254550580|ref|ZP_05141027.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=67
Score = 37.4 bits (85), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (65%), Gaps = 0/45 (0%)
Query 15 LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEH 59
+ R I++DD+L +V+RR+ + R AV+LALR L+G + E
Sbjct 1 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREF 45
>gi|296166367|ref|ZP_06848802.1| toxin-antitoxin system [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898277|gb|EFG77848.1| toxin-antitoxin system [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=70
Score = 37.4 bits (85), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/40 (48%), Positives = 26/40 (65%), Gaps = 0/40 (0%)
Query 17 RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADT 56
R IE++D IQ ++ RY V+ EAV+LALR L G+ T
Sbjct 5 RTNIELEDTYIQTIMDRYGVRTKTEAVDLALRHLAGQPMT 44
>gi|284990201|ref|YP_003408755.1| hypothetical protein Gobs_1668 [Geodermatophilus obscurus DSM
43160]
gi|284063446|gb|ADB74384.1| Protein of unknown function DUF2191 [Geodermatophilus obscurus
DSM 43160]
Length=81
Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/47 (41%), Positives = 28/47 (60%), Gaps = 0/47 (0%)
Query 15 LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGH 61
+ R I++DDDLI V+RRY + ++AV+ ALR + TA H
Sbjct 6 VSRTNIDIDDDLIAGVMRRYGLATKKDAVDFALRQVSVVPMTAREMH 52
>gi|289761723|ref|ZP_06521101.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709229|gb|EFD73245.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=72
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/42 (46%), Positives = 28/42 (67%), Gaps = 1/42 (2%)
Query 10 YLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLL 51
Y W M R I++DD+L +V+RR+ + R AV+LALR L+
Sbjct 2 YRWCM-SRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLV 42
>gi|312115922|ref|YP_004013518.1| hypothetical protein Rvan_3224 [Rhodomicrobium vannielii ATCC
17100]
gi|311221051|gb|ADP72419.1| Protein of unknown function DUF2191 [Rhodomicrobium vannielii
ATCC 17100]
Length=70
Score = 35.0 bits (79), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/35 (49%), Positives = 24/35 (69%), Gaps = 0/35 (0%)
Query 17 RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLL 51
R I++DD LI +V+R VK +EAV+LA+R L
Sbjct 2 RTNIDLDDTLIDEVMRIANVKTKKEAVHLAMREFL 36
Lambda K H
0.318 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127525940264
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40