BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0634A

Length=83
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15840036|ref|NP_335073.1|  hypothetical protein MT0662.1 [Myco...   171    5e-41
gi|340625652|ref|YP_004744104.1|  hypothetical protein MCAN_06321...   169    1e-40
gi|289760758|ref|ZP_06520136.1|  conserved hypothetical protein [...   162    1e-38
gi|167969063|ref|ZP_02551340.1|  hypothetical protein MtubH3_1395...   142    1e-32
gi|15828026|ref|NP_302289.1|  hypothetical protein ML1911A [Mycob...  87.0    8e-16
gi|296168422|ref|ZP_06850302.1|  conserved hypothetical protein [...  84.0    7e-15
gi|41410203|ref|NP_963039.1|  hypothetical protein MAP4105 [Mycob...  84.0    7e-15
gi|118616508|ref|YP_904840.1|  hypothetical protein MUL_0716 [Myc...  83.6    8e-15
gi|183980986|ref|YP_001849277.1|  hypothetical protein MMAR_0966 ...  83.2    1e-14
gi|240169407|ref|ZP_04748066.1|  hypothetical protein MkanA1_0884...  82.4    2e-14
gi|118465705|ref|YP_883662.1|  hypothetical protein MAV_4531 [Myc...  80.1    9e-14
gi|342858868|ref|ZP_08715522.1|  hypothetical protein MCOL_08328 ...  75.9    2e-12
gi|254823023|ref|ZP_05228024.1|  hypothetical protein MintA_24049...  73.9    7e-12
gi|118465333|ref|YP_880567.1|  hypothetical protein MAV_1323 [Myc...  53.5    1e-05
gi|336458663|gb|EGO37625.1|  hypothetical protein (DUF2191) [Myco...  53.1    1e-05
gi|31793189|ref|NP_855682.1|  hypothetical protein Mb2032 [Mycoba...  42.4    0.024
gi|167970462|ref|ZP_02552739.1|  hypothetical protein MtubH3_2149...  41.6    0.043
gi|15609146|ref|NP_216525.1|  hypothetical protein Rv2009 [Mycoba...  41.2    0.052
gi|333989208|ref|YP_004521822.1|  hypothetical protein JDM601_056...  39.7    0.15 
gi|15608698|ref|NP_216076.1|  hypothetical protein Rv1560 [Mycoba...  39.3    0.17 
gi|336179604|ref|YP_004584979.1|  hypothetical protein FsymDg_378...  39.3    0.18 
gi|345302429|ref|YP_004824331.1|  hypothetical protein Rhom172_05...  38.9    0.25 
gi|297563900|ref|YP_003682873.1|  Protein of unknown function DUF...  38.5    0.33 
gi|268316119|ref|YP_003289838.1|  hypothetical protein Rmar_0549 ...  37.7    0.53 
gi|167967386|ref|ZP_02549663.1|  hypothetical protein MtubH3_0485...  37.4    0.80 
gi|296166367|ref|ZP_06848802.1|  toxin-antitoxin system [Mycobact...  37.4    0.83 
gi|284990201|ref|YP_003408755.1|  hypothetical protein Gobs_1668 ...  37.0    0.89 
gi|289761723|ref|ZP_06521101.1|  conserved hypothetical protein [...  36.6    1.2  
gi|312115922|ref|YP_004013518.1|  hypothetical protein Rvan_3224 ...  35.0    4.0  


>gi|15840036|ref|NP_335073.1| hypothetical protein MT0662.1 [Mycobacterium tuberculosis CDC1551]
 gi|31791817|ref|NP_854310.1| hypothetical protein Mb0652 [Mycobacterium bovis AF2122/97]
 gi|57116763|ref|YP_177629.1| hypothetical protein Rv0634A [Mycobacterium tuberculosis H37Rv]
 40 more sequence titles
 Length=83

 Score =  171 bits (432),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 82/83 (99%), Positives = 83/83 (100%), Gaps = 0/83 (0%)

Query  1   LGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG  60
           +GSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG
Sbjct  1   MGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG  60

Query  61  HDDEYDEFSDPNAWVPRRSRDTG  83
           HDDEYDEFSDPNAWVPRRSRDTG
Sbjct  61  HDDEYDEFSDPNAWVPRRSRDTG  83


>gi|340625652|ref|YP_004744104.1| hypothetical protein MCAN_06321 [Mycobacterium canettii CIPT 
140010059]
 gi|340003842|emb|CCC42972.1| hypothetical protein MCAN_06321 [Mycobacterium canettii CIPT 
140010059]
Length=83

 Score =  169 bits (427),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 81/83 (98%), Positives = 83/83 (100%), Gaps = 0/83 (0%)

Query  1   LGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG  60
           +GSDCGCGGYLWSMLKRVEIEVDDDLIQ+VIRRYRVKGAREAVNLALRTLLGEADTAEHG
Sbjct  1   MGSDCGCGGYLWSMLKRVEIEVDDDLIQEVIRRYRVKGAREAVNLALRTLLGEADTAEHG  60

Query  61  HDDEYDEFSDPNAWVPRRSRDTG  83
           HDDEYDEFSDPNAWVPRRSRDTG
Sbjct  61  HDDEYDEFSDPNAWVPRRSRDTG  83


>gi|289760758|ref|ZP_06520136.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289708264|gb|EFD72280.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=94

 Score =  162 bits (411),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 78/79 (99%), Positives = 79/79 (100%), Gaps = 0/79 (0%)

Query  1   LGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG  60
           +GSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG
Sbjct  1   MGSDCGCGGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG  60

Query  61  HDDEYDEFSDPNAWVPRRS  79
           HDDEYDEFSDPNAWVPRRS
Sbjct  61  HDDEYDEFSDPNAWVPRRS  79


>gi|167969063|ref|ZP_02551340.1| hypothetical protein MtubH3_13957 [Mycobacterium tuberculosis 
H37Ra]
 gi|254230967|ref|ZP_04924294.1| hypothetical protein TBCG_00629 [Mycobacterium tuberculosis C]
 gi|254549593|ref|ZP_05140040.1| hypothetical protein Mtube_03880 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 30 more sequence titles
 Length=70

 Score =  142 bits (358),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 70/70 (100%), Positives = 70/70 (100%), Gaps = 0/70 (0%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  73
           MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA
Sbjct  1   MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  60

Query  74  WVPRRSRDTG  83
           WVPRRSRDTG
Sbjct  61  WVPRRSRDTG  70


>gi|15828026|ref|NP_302289.1| hypothetical protein ML1911A [Mycobacterium leprae TN]
 gi|221230503|ref|YP_002503919.1| hypothetical protein MLBr_01911A [Mycobacterium leprae Br4923]
 gi|25397670|pir||B87148 conserved hypothetical protein ML1911A [imported] - Mycobacterium 
leprae
 gi|13093579|emb|CAC30866.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219933610|emb|CAR72008.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=71

 Score = 87.0 bits (214),  Expect = 8e-16, Method: Compositional matrix adjust.
 Identities = 46/71 (65%), Positives = 54/71 (77%), Gaps = 1/71 (1%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHG-HDDEYDEFSDPN  72
           MLK+VEIEVDDDL+Q+VIRRY + G REAV+LAL+ LLGE         D EYDEFS+P+
Sbjct  1   MLKKVEIEVDDDLVQEVIRRYGLLGRREAVHLALKALLGEPGVGGLSEQDPEYDEFSNPD  60

Query  73  AWVPRRSRDTG  83
           AW  RRS DTG
Sbjct  61  AWRTRRSSDTG  71


>gi|296168422|ref|ZP_06850302.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295896716|gb|EFG76351.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=69

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 45/68 (67%), Positives = 52/68 (77%), Gaps = 2/68 (2%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  73
           M+K+VEIEVD DLI + +RR+ +  AREAVNLALRTLL EADT E G  +EYDEFSD  A
Sbjct  1   MIKKVEIEVDVDLIDEAVRRFHLADAREAVNLALRTLLTEADTGEPG--EEYDEFSDLRA  58

Query  74  WVPRRSRD  81
           W PRR  D
Sbjct  59  WQPRRGGD  66


>gi|41410203|ref|NP_963039.1| hypothetical protein MAP4105 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41399037|gb|AAS06655.1| hypothetical protein MAP_4105 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=76

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 43/76 (57%), Positives = 55/76 (73%), Gaps = 2/76 (2%)

Query  8   GGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDE  67
            GY   M K+VEIEVD +L+ + IRR+ +  AREAVNLALRTLL E D+     +DEYDE
Sbjct  3   SGYCCRMRKKVEIEVDLELVDEAIRRFHLADAREAVNLALRTLLHEGDSV--ASEDEYDE  60

Query  68  FSDPNAWVPRRSRDTG  83
           FSD +AW PRR+ ++G
Sbjct  61  FSDLSAWQPRRNAESG  76


>gi|118616508|ref|YP_904840.1| hypothetical protein MUL_0716 [Mycobacterium ulcerans Agy99]
 gi|118568618|gb|ABL03369.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=69

 Score = 83.6 bits (205),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 43/70 (62%), Positives = 53/70 (76%), Gaps = 1/70 (1%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  73
           MLK+VEIE+DDDL+Q+ IRRYR+ G RE V+LALRTLL EA   + G DDEYDEFSD + 
Sbjct  1   MLKKVEIEIDDDLVQEAIRRYRLAGPREVVHLALRTLLAEA-GEKGGGDDEYDEFSDLSV  59

Query  74  WVPRRSRDTG  83
           W P +   +G
Sbjct  60  WDPHKGGRSG  69


>gi|183980986|ref|YP_001849277.1| hypothetical protein MMAR_0966 [Mycobacterium marinum M]
 gi|183174312|gb|ACC39422.1| conserved protein [Mycobacterium marinum M]
Length=69

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 43/70 (62%), Positives = 52/70 (75%), Gaps = 1/70 (1%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  73
           MLK+VEIE+DDDL+Q+ IRRYR+ G RE V+LALRTLL EA     G DDEYDEFSD + 
Sbjct  1   MLKKVEIEIDDDLVQEAIRRYRLAGPREVVHLALRTLLAEA-GENGGGDDEYDEFSDLSV  59

Query  74  WVPRRSRDTG  83
           W P +   +G
Sbjct  60  WDPHKGGRSG  69


>gi|240169407|ref|ZP_04748066.1| hypothetical protein MkanA1_08843 [Mycobacterium kansasii ATCC 
12478]
Length=86

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 43/76 (57%), Positives = 53/76 (70%), Gaps = 1/76 (1%)

Query  8   GGYLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDE  67
           GGY W M K+VEIE+DDDL+Q+ IRRY +  AREAV+LALRTLL E  + E   ++EYDE
Sbjct  12  GGYCWRMRKKVEIEIDDDLVQEAIRRYGLADAREAVHLALRTLLAEGGSGE-ADEEEYDE  70

Query  68  FSDPNAWVPRRSRDTG  83
           FSD +   P R    G
Sbjct  71  FSDLSVLDPHRGHRGG  86


>gi|118465705|ref|YP_883662.1| hypothetical protein MAV_4531 [Mycobacterium avium 104]
 gi|254776964|ref|ZP_05218480.1| hypothetical protein MaviaA2_20166 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118166992|gb|ABK67889.1| conserved hypothetical protein [Mycobacterium avium 104]
 gi|336460575|gb|EGO39468.1| hypothetical protein (DUF2191) [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=68

 Score = 80.1 bits (196),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 41/70 (59%), Positives = 53/70 (76%), Gaps = 2/70 (2%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  73
           M K+VEIEVD +L+ + IRR+ +  AREAVNLALRTLL E D+     +DEYDEFSD +A
Sbjct  1   MRKKVEIEVDLELVDEAIRRFHLADAREAVNLALRTLLHEGDSV--ASEDEYDEFSDLSA  58

Query  74  WVPRRSRDTG  83
           W PRR+ ++G
Sbjct  59  WQPRRNAESG  68


>gi|342858868|ref|ZP_08715522.1| hypothetical protein MCOL_08328 [Mycobacterium colombiense CECT 
3035]
 gi|342133109|gb|EGT86312.1| hypothetical protein MCOL_08328 [Mycobacterium colombiense CECT 
3035]
Length=69

 Score = 75.9 bits (185),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 40/66 (61%), Positives = 49/66 (75%), Gaps = 2/66 (3%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  73
           M K+VEIEVD DL+ + IRR+ +  AREAVNLALRTLL + D+ E   DD YDEFSD +A
Sbjct  1   MKKKVEIEVDVDLVDEAIRRFHLLDAREAVNLALRTLLHDGDSVE--QDDAYDEFSDLSA  58

Query  74  WVPRRS  79
           W P R+
Sbjct  59  WQPHRN  64


>gi|254823023|ref|ZP_05228024.1| hypothetical protein MintA_24049 [Mycobacterium intracellulare 
ATCC 13950]
Length=68

 Score = 73.9 bits (180),  Expect = 7e-12, Method: Compositional matrix adjust.
 Identities = 47/70 (68%), Positives = 54/70 (78%), Gaps = 2/70 (2%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  73
           M K+VEIEVD DL+ + I+R+RV  AREAVNLALRTLL E   A    +DEYDEFSD NA
Sbjct  1   MRKKVEIEVDLDLVDEAIQRFRVADAREAVNLALRTLLREG--ASDEEEDEYDEFSDLNA  58

Query  74  WVPRRSRDTG  83
           W PRRSR+TG
Sbjct  59  WRPRRSRETG  68


>gi|118465333|ref|YP_880567.1| hypothetical protein MAV_1323 [Mycobacterium avium 104]
 gi|254774198|ref|ZP_05215714.1| hypothetical protein MaviaA2_05925 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118166620|gb|ABK67517.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=67

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 33/61 (55%), Positives = 38/61 (63%), Gaps = 5/61 (8%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  73
           M K VEIEVD ++I   IRR+ +  AREAVNLALRTL+   D A  GH D   EF D   
Sbjct  1   MKKTVEIEVDVNMIDDAIRRFHLADAREAVNLALRTLI---DDAGPGHHD--GEFGDLGP  55

Query  74  W  74
           W
Sbjct  56  W  56


>gi|336458663|gb|EGO37625.1| hypothetical protein (DUF2191) [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=67

 Score = 53.1 bits (126),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 33/61 (55%), Positives = 38/61 (63%), Gaps = 5/61 (8%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGHDDEYDEFSDPNA  73
           M K VEIEVD ++I   IRR+ +  AREAVNLALRTL+   D A  GH D   EF D   
Sbjct  1   MKKTVEIEVDVNMIDDAIRRFHLADAREAVNLALRTLI---DDAGPGHHD--GEFGDLGP  55

Query  74  W  74
           W
Sbjct  56  W  56


>gi|31793189|ref|NP_855682.1| hypothetical protein Mb2032 [Mycobacterium bovis AF2122/97]
 gi|121637893|ref|YP_978116.1| hypothetical protein BCG_2026 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990387|ref|YP_002645074.1| hypothetical protein JTY_2021 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31618781|emb|CAD96885.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493540|emb|CAL72014.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224773500|dbj|BAH26306.1| hypothetical protein JTY_2021 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341601930|emb|CCC64604.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=80

 Score = 42.4 bits (98),  Expect = 0.024, Method: Compositional matrix adjust.
 Identities = 27/69 (40%), Positives = 37/69 (54%), Gaps = 10/69 (14%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEA-----DTAEHG-----HDD  63
           ++ R  IE+DD+L+    R YR+   R AV+LALR L+GE        A  G      DD
Sbjct  5   VVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSDD  64

Query  64  EYDEFSDPN  72
           E + FSD +
Sbjct  65  EIESFSDTD  73


>gi|167970462|ref|ZP_02552739.1| hypothetical protein MtubH3_21498 [Mycobacterium tuberculosis 
H37Ra]
 gi|254551032|ref|ZP_05141479.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|308232003|ref|ZP_07414583.2| antitoxin [Mycobacterium tuberculosis SUMu001]
 23 more sequence titles
 Length=75

 Score = 41.6 bits (96),  Expect = 0.043, Method: Compositional matrix adjust.
 Identities = 19/39 (49%), Positives = 26/39 (67%), Gaps = 0/39 (0%)

Query  15  LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGE  53
           + R  IE+DD+L+    R YR+   R AV+LALR L+GE
Sbjct  1   MSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGE  39


>gi|15609146|ref|NP_216525.1| hypothetical protein Rv2009 [Mycobacterium tuberculosis H37Rv]
 gi|15841491|ref|NP_336528.1| hypothetical protein MT2064.1 [Mycobacterium tuberculosis CDC1551]
 gi|148661823|ref|YP_001283346.1| hypothetical protein MRA_2025 [Mycobacterium tuberculosis H37Ra]
 44 more sequence titles
 Length=80

 Score = 41.2 bits (95),  Expect = 0.052, Method: Compositional matrix adjust.
 Identities = 19/40 (48%), Positives = 27/40 (68%), Gaps = 0/40 (0%)

Query  14  MLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGE  53
           ++ R  IE+DD+L+    R YR+   R AV+LALR L+GE
Sbjct  5   VVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGE  44


>gi|333989208|ref|YP_004521822.1| hypothetical protein JDM601_0568 [Mycobacterium sp. JDM601]
 gi|333485176|gb|AEF34568.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=70

 Score = 39.7 bits (91),  Expect = 0.15, Method: Compositional matrix adjust.
 Identities = 20/45 (45%), Positives = 29/45 (65%), Gaps = 0/45 (0%)

Query  15  LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEH  59
           + R  IE+DD+L  +V+RR+ V   + AV+LALR L+G   T E 
Sbjct  1   MARTNIEIDDELTAEVMRRFGVTTKKAAVDLALRRLVGAPLTREF  45


>gi|15608698|ref|NP_216076.1| hypothetical protein Rv1560 [Mycobacterium tuberculosis H37Rv]
 gi|15841027|ref|NP_336064.1| hypothetical protein MT1611 [Mycobacterium tuberculosis CDC1551]
 gi|31792745|ref|NP_855238.1| hypothetical protein Mb1586 [Mycobacterium bovis AF2122/97]
 72 more sequence titles
 Length=72

 Score = 39.3 bits (90),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query  10  YLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEH  59
           Y W M  R  I++DD+L  +V+RR+ +   R AV+LALR L+G   + E 
Sbjct  2   YRWCM-SRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREF  50


>gi|336179604|ref|YP_004584979.1| hypothetical protein FsymDg_3781 [Frankia symbiont of Datisca 
glomerata]
 gi|334860584|gb|AEH11058.1| Protein of unknown function DUF2191 [Frankia symbiont of Datisca 
glomerata]
Length=102

 Score = 39.3 bits (90),  Expect = 0.18, Method: Compositional matrix adjust.
 Identities = 20/39 (52%), Positives = 27/39 (70%), Gaps = 0/39 (0%)

Query  17  RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEAD  55
           R  I VDD+LI++ +R + V   RE V+LALR L+G AD
Sbjct  7   RASIAVDDELIEEAMRLFGVNTRREIVDLALRHLIGRAD  45


>gi|345302429|ref|YP_004824331.1| hypothetical protein Rhom172_0553 [Rhodothermus marinus SG0.5JP17-172]
 gi|345111662|gb|AEN72494.1| Protein of unknown function DUF2191 [Rhodothermus marinus SG0.5JP17-172]
Length=70

 Score = 38.9 bits (89),  Expect = 0.25, Method: Compositional matrix adjust.
 Identities = 20/35 (58%), Positives = 26/35 (75%), Gaps = 0/35 (0%)

Query  17  RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLL  51
           R  IE+DD+L++KV+R   +K  REAV L LRTLL
Sbjct  2   RTSIEIDDELMRKVLRVTGLKTKREAVELGLRTLL  36


>gi|297563900|ref|YP_003682873.1| Protein of unknown function DUF2191 [Nocardiopsis dassonvillei 
subsp. dassonvillei DSM 43111]
 gi|296848349|gb|ADH70367.1| Protein of unknown function DUF2191 [Nocardiopsis dassonvillei 
subsp. dassonvillei DSM 43111]
Length=73

 Score = 38.5 bits (88),  Expect = 0.33, Method: Compositional matrix adjust.
 Identities = 17/45 (38%), Positives = 28/45 (63%), Gaps = 0/45 (0%)

Query  15  LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEH  59
           + R  I++DD+L+   + R++V   REAV++ALR  +G   T E 
Sbjct  1   MSRTNIDIDDELVTTAMERFQVSTKREAVDIALRRAVGTPLTKEF  45


>gi|268316119|ref|YP_003289838.1| hypothetical protein Rmar_0549 [Rhodothermus marinus DSM 4252]
 gi|262333653|gb|ACY47450.1| conserved hypothetical protein [Rhodothermus marinus DSM 4252]
Length=70

 Score = 37.7 bits (86),  Expect = 0.53, Method: Compositional matrix adjust.
 Identities = 19/35 (55%), Positives = 26/35 (75%), Gaps = 0/35 (0%)

Query  17  RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLL  51
           R  IE+DD+L++KV+R   +K  REA+ L LRTLL
Sbjct  2   RTSIEIDDELMRKVLRVTGLKTKREAMELGLRTLL  36


>gi|167967386|ref|ZP_02549663.1| hypothetical protein MtubH3_04852 [Mycobacterium tuberculosis 
H37Ra]
 gi|254550580|ref|ZP_05141027.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=67

 Score = 37.4 bits (85),  Expect = 0.80, Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 29/45 (65%), Gaps = 0/45 (0%)

Query  15  LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEH  59
           + R  I++DD+L  +V+RR+ +   R AV+LALR L+G   + E 
Sbjct  1   MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREF  45


>gi|296166367|ref|ZP_06848802.1| toxin-antitoxin system [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898277|gb|EFG77848.1| toxin-antitoxin system [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=70

 Score = 37.4 bits (85),  Expect = 0.83, Method: Compositional matrix adjust.
 Identities = 19/40 (48%), Positives = 26/40 (65%), Gaps = 0/40 (0%)

Query  17  RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADT  56
           R  IE++D  IQ ++ RY V+   EAV+LALR L G+  T
Sbjct  5   RTNIELEDTYIQTIMDRYGVRTKTEAVDLALRHLAGQPMT  44


>gi|284990201|ref|YP_003408755.1| hypothetical protein Gobs_1668 [Geodermatophilus obscurus DSM 
43160]
 gi|284063446|gb|ADB74384.1| Protein of unknown function DUF2191 [Geodermatophilus obscurus 
DSM 43160]
Length=81

 Score = 37.0 bits (84),  Expect = 0.89, Method: Compositional matrix adjust.
 Identities = 19/47 (41%), Positives = 28/47 (60%), Gaps = 0/47 (0%)

Query  15  LKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLLGEADTAEHGH  61
           + R  I++DDDLI  V+RRY +   ++AV+ ALR +     TA   H
Sbjct  6   VSRTNIDIDDDLIAGVMRRYGLATKKDAVDFALRQVSVVPMTAREMH  52


>gi|289761723|ref|ZP_06521101.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289709229|gb|EFD73245.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=72

 Score = 36.6 bits (83),  Expect = 1.2, Method: Compositional matrix adjust.
 Identities = 19/42 (46%), Positives = 28/42 (67%), Gaps = 1/42 (2%)

Query  10  YLWSMLKRVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLL  51
           Y W M  R  I++DD+L  +V+RR+ +   R AV+LALR L+
Sbjct  2   YRWCM-SRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLV  42


>gi|312115922|ref|YP_004013518.1| hypothetical protein Rvan_3224 [Rhodomicrobium vannielii ATCC 
17100]
 gi|311221051|gb|ADP72419.1| Protein of unknown function DUF2191 [Rhodomicrobium vannielii 
ATCC 17100]
Length=70

 Score = 35.0 bits (79),  Expect = 4.0, Method: Compositional matrix adjust.
 Identities = 17/35 (49%), Positives = 24/35 (69%), Gaps = 0/35 (0%)

Query  17  RVEIEVDDDLIQKVIRRYRVKGAREAVNLALRTLL  51
           R  I++DD LI +V+R   VK  +EAV+LA+R  L
Sbjct  2   RTNIDLDDTLIDEVMRIANVKTKKEAVHLAMREFL  36



Lambda     K      H
   0.318    0.139    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127525940264




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40