BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0634B
Length=55
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840037|ref|NP_335074.1| 50S ribosomal protein L33 [Mycobact... 115 2e-24
gi|296168423|ref|ZP_06850303.1| 50S ribosomal protein L33 [Mycob... 115 2e-24
gi|298524126|ref|ZP_07011535.1| ribosomal protein L33 [Mycobacte... 115 3e-24
gi|41410204|ref|NP_963040.1| 50S ribosomal protein L33 [Mycobact... 114 3e-24
gi|289446191|ref|ZP_06435935.1| 50S ribosomal protein L33 rpmG2 ... 114 4e-24
gi|333989297|ref|YP_004521911.1| 50S ribosomal protein L33 type ... 114 7e-24
gi|296138470|ref|YP_003645713.1| 50S ribosomal protein L33 [Tsuk... 113 9e-24
gi|120402241|ref|YP_952070.1| 50S ribosomal protein L33 [Mycobac... 113 1e-23
gi|118616509|ref|YP_904841.1| 50S ribosomal protein L33 type 2, ... 111 5e-23
gi|111018981|ref|YP_701953.1| 50S ribosomal protein L33 [Rhodoco... 110 5e-23
gi|15828025|ref|NP_302288.1| 50S ribosomal protein L33 [Mycobact... 110 9e-23
gi|226361076|ref|YP_002778854.1| 50S ribosomal protein L33 [Rhod... 110 1e-22
gi|108797891|ref|YP_638088.1| 50S ribosomal protein L33 [Mycobac... 109 1e-22
gi|126433554|ref|YP_001069245.1| 50S ribosomal protein L33 [Myco... 109 1e-22
gi|118471282|ref|YP_885727.1| 50S ribosomal protein L33 [Mycobac... 108 2e-22
gi|169630978|ref|YP_001704627.1| 50S ribosomal protein L33 [Myco... 107 6e-22
gi|54027093|ref|YP_121335.1| 50S ribosomal protein L33 [Nocardia... 104 5e-21
gi|86739276|ref|YP_479676.1| 50S ribosomal protein L33 [Frankia ... 102 2e-20
gi|257054426|ref|YP_003132258.1| 50S ribosomal protein L33P [Sac... 102 2e-20
gi|331699216|ref|YP_004335455.1| 50S ribosomal protein L33 [Pseu... 101 4e-20
gi|117927496|ref|YP_872047.1| 50S ribosomal protein L33P [Acidot... 100 9e-20
gi|336116701|ref|YP_004571468.1| 50S ribosomal protein L33 [Micr... 98.6 3e-19
gi|312200037|ref|YP_004020098.1| ribosomal protein L33 [Frankia ... 98.2 4e-19
gi|300782517|ref|YP_003762808.1| 50S ribosomal protein L33 [Amyc... 97.8 5e-19
gi|258651250|ref|YP_003200406.1| 50S ribosomal protein L33 [Naka... 97.1 7e-19
gi|326382997|ref|ZP_08204686.1| 50S ribosomal protein L33 [Gordo... 97.1 8e-19
gi|256380631|ref|YP_003104291.1| 50S ribosomal protein L33 [Acti... 97.1 8e-19
gi|271962306|ref|YP_003336502.1| 50S ribosomal protein L33 [Stre... 96.7 9e-19
gi|336179802|ref|YP_004585177.1| 50S ribosomal protein L33 [Fran... 96.3 1e-18
gi|296268347|ref|YP_003650979.1| 50S ribosomal protein L33 [Ther... 95.9 2e-18
gi|158317809|ref|YP_001510317.1| 50S ribosomal protein L33 [Fran... 95.9 2e-18
gi|134103305|ref|YP_001108966.1| 50S ribosomal protein L33 type ... 95.9 2e-18
gi|297571959|ref|YP_003697733.1| ribosomal protein L33 [Arcanoba... 95.5 2e-18
gi|269955406|ref|YP_003325195.1| 50S ribosomal protein L33 [Xyla... 95.5 2e-18
gi|317125913|ref|YP_004100025.1| 50S ribosomal protein L33P [Int... 94.4 5e-18
gi|269794099|ref|YP_003313554.1| 50S ribosomal protein L33P [San... 94.4 6e-18
gi|334336146|ref|YP_004541298.1| 50S ribosomal protein L33 [Isop... 94.0 7e-18
gi|84494835|ref|ZP_00993954.1| 50S ribosomal protein L33 [Janiba... 94.0 7e-18
gi|291303797|ref|YP_003515075.1| 50S ribosomal protein L33 [Stac... 93.6 9e-18
gi|269128559|ref|YP_003301929.1| 50S ribosomal protein L33 [Ther... 93.2 1e-17
gi|302869992|ref|YP_003838629.1| 50S ribosomal protein L33 [Micr... 92.8 1e-17
gi|152964632|ref|YP_001360416.1| 50S ribosomal protein L33 [Kine... 92.4 2e-17
gi|284034057|ref|YP_003383988.1| 50S ribosomal protein L33 [Krib... 92.4 2e-17
gi|238061141|ref|ZP_04605850.1| 50S ribosomal protein L33 [Micro... 92.0 3e-17
gi|257069283|ref|YP_003155538.1| 50S ribosomal protein L33P [Bra... 91.7 3e-17
gi|311744198|ref|ZP_07718002.1| 50S ribosomal protein L33 [Aerom... 91.7 3e-17
gi|145596453|ref|YP_001160750.1| 50S ribosomal protein L33 [Sali... 91.7 4e-17
gi|159039853|ref|YP_001539106.1| 50S ribosomal protein L33 [Sali... 91.3 4e-17
gi|119714916|ref|YP_921881.1| 50S ribosomal protein L33 [Nocardi... 91.3 5e-17
gi|72163066|ref|YP_290723.1| 50S ribosomal protein L33 [Thermobi... 90.9 6e-17
>gi|15840037|ref|NP_335074.1| 50S ribosomal protein L33 [Mycobacterium tuberculosis CDC1551]
gi|31791818|ref|NP_854311.1| 50S ribosomal protein L33 [Mycobacterium bovis AF2122/97]
gi|57116764|ref|YP_177630.1| 50S ribosomal protein L33 [Mycobacterium tuberculosis H37Rv]
82 more sequence titles
Length=55
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/55 (100%), Positives = 55/55 (100%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
>gi|296168423|ref|ZP_06850303.1| 50S ribosomal protein L33 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896717|gb|EFG76352.1| 50S ribosomal protein L33 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=55
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/55 (99%), Positives = 55/55 (100%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDR+ELKKFCPNCGKHQAHRETR
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRMELKKFCPNCGKHQAHRETR 55
>gi|298524126|ref|ZP_07011535.1| ribosomal protein L33 [Mycobacterium tuberculosis 94_M4241A]
gi|298493920|gb|EFI29214.1| ribosomal protein L33 [Mycobacterium tuberculosis 94_M4241A]
Length=55
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/55 (99%), Positives = 55/55 (100%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITK+NRRNDPDRLELKKFCPNCGKHQAHRETR
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKRNRRNDPDRLELKKFCPNCGKHQAHRETR 55
>gi|41410204|ref|NP_963040.1| 50S ribosomal protein L33 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254776963|ref|ZP_05218479.1| 50S ribosomal protein L33 [Mycobacterium avium subsp. avium ATCC
25291]
gi|81700286|sp|Q73SG8.1|RL332_MYCPA RecName: Full=50S ribosomal protein L33 2
gi|218547192|sp|A0QL73.2|RL331_MYCA1 RecName: Full=50S ribosomal protein L33 1
gi|41399038|gb|AAS06656.1| RpmG2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460574|gb|EGO39467.1| ribosomal protein L33 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=55
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/55 (99%), Positives = 55/55 (100%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKK+CPNCGKHQAHRETR
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR 55
>gi|289446191|ref|ZP_06435935.1| 50S ribosomal protein L33 rpmG2 [Mycobacterium tuberculosis CPHL_A]
gi|289419149|gb|EFD16350.1| 50S ribosomal protein L33 rpmG2 [Mycobacterium tuberculosis CPHL_A]
Length=55
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/55 (99%), Positives = 54/55 (99%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKIT ACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR
Sbjct 1 MASSTDVRPKITFACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
>gi|333989297|ref|YP_004521911.1| 50S ribosomal protein L33 type 2 RpmG2 [Mycobacterium sp. JDM601]
gi|333485265|gb|AEF34657.1| 50S ribosomal protein L33 type 2 RpmG2 [Mycobacterium sp. JDM601]
Length=55
Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/55 (97%), Positives = 55/55 (100%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQ+HRE+R
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQSHRESR 55
>gi|296138470|ref|YP_003645713.1| 50S ribosomal protein L33 [Tsukamurella paurometabola DSM 20162]
gi|296026604|gb|ADG77374.1| ribosomal protein L33 [Tsukamurella paurometabola DSM 20162]
Length=55
Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/55 (97%), Positives = 54/55 (99%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCG HQAHRE+R
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGSHQAHRESR 55
>gi|120402241|ref|YP_952070.1| 50S ribosomal protein L33 [Mycobacterium vanbaalenii PYR-1]
gi|145225698|ref|YP_001136376.1| 50S ribosomal protein L33 [Mycobacterium gilvum PYR-GCK]
gi|262201098|ref|YP_003272306.1| 50S ribosomal protein L33 [Gordonia bronchialis DSM 43247]
9 more sequence titles
Length=55
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/55 (95%), Positives = 55/55 (100%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLE+KKFCPNCGKHQAH+E+R
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLEIKKFCPNCGKHQAHKESR 55
>gi|118616509|ref|YP_904841.1| 50S ribosomal protein L33 type 2, RpmG2 [Mycobacterium ulcerans
Agy99]
gi|183980987|ref|YP_001849278.1| 50S ribosomal protein L33 type 2, RpmG2 [Mycobacterium marinum
M]
gi|218547153|sp|A0PM01.1|RL331_MYCUA RecName: Full=50S ribosomal protein L33 1
gi|218547167|sp|B2HSG5.1|RL332_MYCMM RecName: Full=50S ribosomal protein L33 2
gi|118568619|gb|ABL03370.1| 50S ribosomal protein L33 type 2, RpmG2 [Mycobacterium ulcerans
Agy99]
gi|183174313|gb|ACC39423.1| 50S ribosomal protein L33 type 2, RpmG2 [Mycobacterium marinum
M]
Length=55
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/55 (97%), Positives = 53/55 (97%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFC NCG HQAHRETR
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCRNCGSHQAHRETR 55
>gi|111018981|ref|YP_701953.1| 50S ribosomal protein L33 [Rhodococcus jostii RHA1]
gi|226305201|ref|YP_002765159.1| 50S ribosomal protein L33 [Rhodococcus erythropolis PR4]
gi|229490571|ref|ZP_04384409.1| ribosomal protein L33 [Rhodococcus erythropolis SK121]
8 more sequence titles
Length=55
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/55 (93%), Positives = 54/55 (99%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCG HQ+HRE++
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGTHQSHRESK 55
>gi|15828025|ref|NP_302288.1| 50S ribosomal protein L33 [Mycobacterium leprae TN]
gi|221230502|ref|YP_002503918.1| 50S ribosomal protein L33 [Mycobacterium leprae Br4923]
gi|13633484|sp|Q9CBJ5.1|RL332_MYCLE RecName: Full=50S ribosomal protein L33 2
gi|254801848|sp|B8ZSE2.1|RL33_MYCLB RecName: Full=50S ribosomal protein L33
gi|13093578|emb|CAC30865.1| 50S ribosomal protein L33 type 2 [Mycobacterium leprae]
gi|219933609|emb|CAR72007.1| 50S ribosomal protein L33 type 2 [Mycobacterium leprae Br4923]
Length=55
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/55 (93%), Positives = 54/55 (99%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKIT+ACEVCKHRNYITKKNRRNDPDR+ELKKFC NCGKHQ+HRETR
Sbjct 1 MASSTDVRPKITMACEVCKHRNYITKKNRRNDPDRMELKKFCRNCGKHQSHRETR 55
>gi|226361076|ref|YP_002778854.1| 50S ribosomal protein L33 [Rhodococcus opacus B4]
gi|226239561|dbj|BAH49909.1| 50S ribosomal protein L33 [Rhodococcus opacus B4]
Length=55
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/55 (91%), Positives = 54/55 (99%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLE+KKFCPNCG HQ+HRE++
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLEIKKFCPNCGTHQSHRESK 55
>gi|108797891|ref|YP_638088.1| 50S ribosomal protein L33 [Mycobacterium sp. MCS]
gi|119866986|ref|YP_936938.1| 50S ribosomal protein L33 [Mycobacterium sp. KMS]
gi|123179431|sp|Q1BDK2.1|RL331_MYCSS RecName: Full=50S ribosomal protein L33 1
gi|218547172|sp|A1UBE0.1|RL331_MYCSK RecName: Full=50S ribosomal protein L33 1
gi|108768310|gb|ABG07032.1| LSU ribosomal protein L33P [Mycobacterium sp. MCS]
gi|119693075|gb|ABL90148.1| LSU ribosomal protein L33P [Mycobacterium sp. KMS]
Length=55
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/55 (93%), Positives = 54/55 (99%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCG H+AH+E+R
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGTHRAHKESR 55
>gi|126433554|ref|YP_001069245.1| 50S ribosomal protein L33 [Mycobacterium sp. JLS]
gi|218547128|sp|A3PV27.1|RL331_MYCSJ RecName: Full=50S ribosomal protein L33 1
gi|126233354|gb|ABN96754.1| LSU ribosomal protein L33P [Mycobacterium sp. JLS]
Length=55
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/55 (93%), Positives = 54/55 (99%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCG H+AH+E+R
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGVHRAHKESR 55
>gi|118471282|ref|YP_885727.1| 50S ribosomal protein L33 [Mycobacterium smegmatis str. MC2 155]
gi|218547127|sp|A0QS39.1|RL331_MYCS2 RecName: Full=50S ribosomal protein L33 1
gi|118172569|gb|ABK73465.1| ribosomal protein L33 [Mycobacterium smegmatis str. MC2 155]
Length=55
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/55 (91%), Positives = 53/55 (97%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLE+KKFCPNCG HQ H+E+R
Sbjct 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLEIKKFCPNCGTHQPHKESR 55
>gi|169630978|ref|YP_001704627.1| 50S ribosomal protein L33 [Mycobacterium abscessus ATCC 19977]
gi|218547164|sp|B1MH92.1|RL332_MYCA9 RecName: Full=50S ribosomal protein L33 2
gi|169242945|emb|CAM63973.1| 50S ribosomal protein L33 [Mycobacterium abscessus]
Length=55
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/55 (90%), Positives = 52/55 (95%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MASSTDVRPKITLACE CKHRNYITKKNRRNDPDRLE+KKFCPNCG HQ H+E+R
Sbjct 1 MASSTDVRPKITLACETCKHRNYITKKNRRNDPDRLEIKKFCPNCGSHQPHKESR 55
>gi|54027093|ref|YP_121335.1| 50S ribosomal protein L33 [Nocardia farcinica IFM 10152]
gi|81822848|sp|Q5YPC0.1|RL332_NOCFA RecName: Full=50S ribosomal protein L33 2
gi|54018601|dbj|BAD59971.1| putative ribosomal protein L33 [Nocardia farcinica IFM 10152]
Length=56
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/54 (91%), Positives = 51/54 (95%), Gaps = 0/54 (0%)
Query 2 ASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
A STDVRPKITLACE CKHRNYITKKNRRNDPDRLELKKFCPNCG H+AHRE+R
Sbjct 3 AKSTDVRPKITLACEQCKHRNYITKKNRRNDPDRLELKKFCPNCGTHRAHRESR 56
>gi|86739276|ref|YP_479676.1| 50S ribosomal protein L33 [Frankia sp. CcI3]
gi|111220526|ref|YP_711320.1| 50S ribosomal protein L33 [Frankia alni ACN14a]
gi|123143535|sp|Q0RRU1.1|RL33_FRAAA RecName: Full=50S ribosomal protein L33
gi|123724248|sp|Q2JFJ5.1|RL33_FRASC RecName: Full=50S ribosomal protein L33
gi|86566138|gb|ABD09947.1| LSU ribosomal protein L33P [Frankia sp. CcI3]
gi|111148058|emb|CAJ59724.1| 50S ribosomal protein L33 type 2 [Frankia alni ACN14a]
Length=54
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/53 (87%), Positives = 51/53 (97%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKIT+AC+VCKHRNYIT+KNRRNDPDRLELKKFCPNCGKH HRETR
Sbjct 2 AATDVRPKITMACQVCKHRNYITRKNRRNDPDRLELKKFCPNCGKHTEHRETR 54
>gi|257054426|ref|YP_003132258.1| 50S ribosomal protein L33P [Saccharomonospora viridis DSM 43017]
gi|256584298|gb|ACU95431.1| LSU ribosomal protein L33P [Saccharomonospora viridis DSM 43017]
Length=54
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/53 (87%), Positives = 51/53 (97%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLACEVCKHRNYIT KNRRNDPDRLE+KKFCPNCG H+AH+ETR
Sbjct 2 AATDVRPKITLACEVCKHRNYITTKNRRNDPDRLEMKKFCPNCGTHRAHKETR 54
>gi|331699216|ref|YP_004335455.1| 50S ribosomal protein L33 [Pseudonocardia dioxanivorans CB1190]
gi|326953905|gb|AEA27602.1| 50S ribosomal protein L33 [Pseudonocardia dioxanivorans CB1190]
Length=55
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/55 (86%), Positives = 50/55 (91%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA +TDVRPKITLACE CKHRNYITKKNRRNDPDRL +KKFCPNCG H+ HRETR
Sbjct 1 MAKATDVRPKITLACEECKHRNYITKKNRRNDPDRLAIKKFCPNCGTHREHRETR 55
>gi|117927496|ref|YP_872047.1| 50S ribosomal protein L33P [Acidothermus cellulolyticus 11B]
gi|166230296|sp|A0LRK1.1|RL33_ACIC1 RecName: Full=50S ribosomal protein L33
gi|117647959|gb|ABK52061.1| LSU ribosomal protein L33P [Acidothermus cellulolyticus 11B]
Length=55
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/55 (82%), Positives = 51/55 (93%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA+ TD+RPKITLAC+ CKHRNYIT+KNRRNDPDRLELKK+CP+C KHQ HRETR
Sbjct 1 MAAKTDIRPKITLACQECKHRNYITRKNRRNDPDRLELKKYCPHCNKHQVHRETR 55
>gi|336116701|ref|YP_004571468.1| 50S ribosomal protein L33 [Microlunatus phosphovorus NM-1]
gi|334684480|dbj|BAK34065.1| 50S ribosomal protein L33 [Microlunatus phosphovorus NM-1]
Length=55
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/55 (86%), Positives = 48/55 (88%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA STDVRPKIT+AC VCK RNYITKKNRRNDPDRLELKKFCP C H AHRETR
Sbjct 1 MAKSTDVRPKITMACTVCKERNYITKKNRRNDPDRLELKKFCPRCHSHTAHRETR 55
>gi|312200037|ref|YP_004020098.1| ribosomal protein L33 [Frankia sp. EuI1c]
gi|311231373|gb|ADP84228.1| ribosomal protein L33 [Frankia sp. EuI1c]
Length=54
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/53 (85%), Positives = 50/53 (95%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLAC+VCKHRNYIT+KNRRNDPDRLELKKFCPNC +H HRETR
Sbjct 2 AATDVRPKITLACQVCKHRNYITRKNRRNDPDRLELKKFCPNCRQHTDHRETR 54
>gi|300782517|ref|YP_003762808.1| 50S ribosomal protein L33 [Amycolatopsis mediterranei U32]
gi|302523943|ref|ZP_07276285.1| ribosomal protein L33 [Streptomyces sp. AA4]
gi|299792031|gb|ADJ42406.1| large subunit ribosomal protein L33 [Amycolatopsis mediterranei
U32]
gi|302432838|gb|EFL04654.1| ribosomal protein L33 [Streptomyces sp. AA4]
Length=54
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/53 (84%), Positives = 50/53 (95%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLACE CKHRNYITKKNRRN+PDRLE+KKFCPNCG H+ H+ETR
Sbjct 2 AATDVRPKITLACEECKHRNYITKKNRRNNPDRLEMKKFCPNCGTHRTHKETR 54
>gi|258651250|ref|YP_003200406.1| 50S ribosomal protein L33 [Nakamurella multipartita DSM 44233]
gi|258554475|gb|ACV77417.1| ribosomal protein L33 [Nakamurella multipartita DSM 44233]
Length=54
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/53 (84%), Positives = 50/53 (95%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLACE CKHRNYIT+KNRRNDPDRLE+KKFCPNCG H+ H+ETR
Sbjct 2 AATDVRPKITLACEECKHRNYITRKNRRNDPDRLEIKKFCPNCGVHRKHKETR 54
>gi|326382997|ref|ZP_08204686.1| 50S ribosomal protein L33 [Gordonia neofelifaecis NRRL B-59395]
gi|326198133|gb|EGD55318.1| 50S ribosomal protein L33 [Gordonia neofelifaecis NRRL B-59395]
Length=49
Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/49 (90%), Positives = 48/49 (98%), Gaps = 0/49 (0%)
Query 7 VRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
+RPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKH+ H+E+R
Sbjct 1 MRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHETHKESR 49
>gi|256380631|ref|YP_003104291.1| 50S ribosomal protein L33 [Actinosynnema mirum DSM 43827]
gi|255924934|gb|ACU40445.1| ribosomal protein L33 [Actinosynnema mirum DSM 43827]
Length=54
Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/53 (84%), Positives = 50/53 (95%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLACE CKHRNYIT+KNRRNDPDRLE+KKFCPNC H+AH+ETR
Sbjct 2 AATDVRPKITLACEECKHRNYITRKNRRNDPDRLEIKKFCPNCKTHKAHKETR 54
>gi|271962306|ref|YP_003336502.1| 50S ribosomal protein L33 [Streptosporangium roseum DSM 43021]
gi|270505481|gb|ACZ83759.1| ribosomal protein L33 [Streptosporangium roseum DSM 43021]
Length=54
Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/53 (84%), Positives = 50/53 (95%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLAC+ CKHRNYIT+KNRRNDPDRLELKK+CPNC H+AHRETR
Sbjct 2 AATDVRPKITLACQECKHRNYITRKNRRNDPDRLELKKYCPNCKTHKAHRETR 54
>gi|336179802|ref|YP_004585177.1| 50S ribosomal protein L33 [Frankia symbiont of Datisca glomerata]
gi|334860782|gb|AEH11256.1| 50S ribosomal protein L33 [Frankia symbiont of Datisca glomerata]
Length=54
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/53 (84%), Positives = 49/53 (93%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLAC+VCKHRNYIT+KNRRNDPDRLEL+KFCPNC H HRETR
Sbjct 2 AATDVRPKITLACQVCKHRNYITRKNRRNDPDRLELRKFCPNCRHHTEHRETR 54
>gi|296268347|ref|YP_003650979.1| 50S ribosomal protein L33 [Thermobispora bispora DSM 43833]
gi|296091134|gb|ADG87086.1| ribosomal protein L33 [Thermobispora bispora DSM 43833]
Length=54
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/53 (84%), Positives = 49/53 (93%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
+STDVRPKITLAC+ CKHRNYIT+KNRRNDPDRLELKK+CPNC H+ HRETR
Sbjct 2 ASTDVRPKITLACQECKHRNYITRKNRRNDPDRLELKKYCPNCKTHRVHRETR 54
>gi|158317809|ref|YP_001510317.1| 50S ribosomal protein L33 [Frankia sp. EAN1pec]
gi|288917210|ref|ZP_06411579.1| ribosomal protein L33 [Frankia sp. EUN1f]
gi|229470389|sp|A8LC74.1|RL33_FRASN RecName: Full=50S ribosomal protein L33
gi|158113214|gb|ABW15411.1| ribosomal protein L33 [Frankia sp. EAN1pec]
gi|288351401|gb|EFC85609.1| ribosomal protein L33 [Frankia sp. EUN1f]
Length=54
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/53 (82%), Positives = 49/53 (93%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKIT+AC+VCKHRNYIT+KNRRNDPDRLEL+KFCPNC H HRETR
Sbjct 2 AATDVRPKITMACQVCKHRNYITRKNRRNDPDRLELRKFCPNCRTHTEHRETR 54
>gi|134103305|ref|YP_001108966.1| 50S ribosomal protein L33 type 2 [Saccharopolyspora erythraea
NRRL 2338]
gi|291004476|ref|ZP_06562449.1| 50S ribosomal protein L33 type 2 [Saccharopolyspora erythraea
NRRL 2338]
gi|218547262|sp|A4FPR6.1|RL332_SACEN RecName: Full=50S ribosomal protein L33 2
gi|133915928|emb|CAM06041.1| 50S ribosomal protein L33 type 2 [Saccharopolyspora erythraea
NRRL 2338]
Length=54
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/53 (82%), Positives = 48/53 (91%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLACE CKHRNYIT KNRRNDPDRL +KKFCPNCG H+ H+ETR
Sbjct 2 AATDVRPKITLACEECKHRNYITNKNRRNDPDRLAMKKFCPNCGTHRVHKETR 54
>gi|297571959|ref|YP_003697733.1| ribosomal protein L33 [Arcanobacterium haemolyticum DSM 20595]
gi|296932306|gb|ADH93114.1| ribosomal protein L33 [Arcanobacterium haemolyticum DSM 20595]
Length=56
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/56 (84%), Positives = 49/56 (88%), Gaps = 1/56 (1%)
Query 1 MAS-STDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MAS S DVRPKITLACEVCK RNYITKKNRRN PDRLELKK+CP C + QAHRETR
Sbjct 1 MASKSADVRPKITLACEVCKERNYITKKNRRNSPDRLELKKYCPRCNQSQAHRETR 56
>gi|269955406|ref|YP_003325195.1| 50S ribosomal protein L33 [Xylanimonas cellulosilytica DSM 15894]
gi|269304087|gb|ACZ29637.1| ribosomal protein L33 [Xylanimonas cellulosilytica DSM 15894]
Length=56
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/54 (86%), Positives = 46/54 (86%), Gaps = 0/54 (0%)
Query 2 ASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
A S DVRPKITLAC CK RNYITKKNRRNDPDRLEL KFCP CGKH AHRETR
Sbjct 3 AKSADVRPKITLACVDCKERNYITKKNRRNDPDRLELAKFCPRCGKHTAHRETR 56
>gi|317125913|ref|YP_004100025.1| 50S ribosomal protein L33P [Intrasporangium calvum DSM 43043]
gi|315590001|gb|ADU49298.1| LSU ribosomal protein L33P [Intrasporangium calvum DSM 43043]
Length=56
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/56 (83%), Positives = 48/56 (86%), Gaps = 1/56 (1%)
Query 1 MAS-STDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MAS STDVRPKIT+AC CKHRNYITKKNRRN+PDRL KFCPNCGKH HRETR
Sbjct 1 MASKSTDVRPKITMACADCKHRNYITKKNRRNNPDRLAFNKFCPNCGKHTEHRETR 56
>gi|269794099|ref|YP_003313554.1| 50S ribosomal protein L33P [Sanguibacter keddieii DSM 10542]
gi|269096284|gb|ACZ20720.1| LSU ribosomal protein L33P [Sanguibacter keddieii DSM 10542]
Length=56
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/56 (84%), Positives = 49/56 (88%), Gaps = 1/56 (1%)
Query 1 MAS-STDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MAS S+DVRPKITLAC CK RNYITKKNRRN+PDRLEL KFCP CGKH AHRETR
Sbjct 1 MASKSSDVRPKITLACVECKERNYITKKNRRNNPDRLELAKFCPRCGKHNAHRETR 56
>gi|334336146|ref|YP_004541298.1| 50S ribosomal protein L33 [Isoptericola variabilis 225]
gi|334106514|gb|AEG43404.1| 50S ribosomal protein L33 [Isoptericola variabilis 225]
Length=56
Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/56 (84%), Positives = 48/56 (86%), Gaps = 1/56 (1%)
Query 1 MAS-STDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MAS S DVRPKITLAC CK RNYITKKNRRNDPDRLEL KFCP CGKH +HRETR
Sbjct 1 MASKSADVRPKITLACVDCKERNYITKKNRRNDPDRLELAKFCPRCGKHTSHRETR 56
>gi|84494835|ref|ZP_00993954.1| 50S ribosomal protein L33 [Janibacter sp. HTCC2649]
gi|84384328|gb|EAQ00208.1| 50S ribosomal protein L33 [Janibacter sp. HTCC2649]
Length=55
Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/55 (82%), Positives = 46/55 (84%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA +TDVRPKITLAC CK RNYITKKNRRNDPDRLEL KFCP C KH HRETR
Sbjct 1 MAKATDVRPKITLACTECKERNYITKKNRRNDPDRLELAKFCPRCKKHTEHRETR 55
>gi|291303797|ref|YP_003515075.1| 50S ribosomal protein L33 [Stackebrandtia nassauensis DSM 44728]
gi|290573017|gb|ADD45982.1| ribosomal protein L33 [Stackebrandtia nassauensis DSM 44728]
Length=56
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/53 (84%), Positives = 46/53 (87%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
S TDVRPKIT+AC CK RNYITKKNRRNDPDR+ELKKFCP C KH AHRETR
Sbjct 4 SGTDVRPKITMACVECKERNYITKKNRRNDPDRMELKKFCPRCNKHTAHRETR 56
>gi|269128559|ref|YP_003301929.1| 50S ribosomal protein L33 [Thermomonospora curvata DSM 43183]
gi|268313517|gb|ACY99891.1| ribosomal protein L33 [Thermomonospora curvata DSM 43183]
Length=54
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/53 (82%), Positives = 49/53 (93%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLAC+ CKHRNYIT+KNRRNDPDRLELKK+CPNC H+ HRETR
Sbjct 2 AATDVRPKITLACQECKHRNYITRKNRRNDPDRLELKKYCPNCRCHRVHRETR 54
>gi|302869992|ref|YP_003838629.1| 50S ribosomal protein L33 [Micromonospora aurantiaca ATCC 27029]
gi|315501453|ref|YP_004080340.1| 50S ribosomal protein L33 [Micromonospora sp. L5]
gi|302572851|gb|ADL49053.1| ribosomal protein L33 [Micromonospora aurantiaca ATCC 27029]
gi|315408072|gb|ADU06189.1| ribosomal protein L33 [Micromonospora sp. L5]
Length=55
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 47/55 (86%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA +TDVRPKITLAC CK RNYIT+KNRRNDPDR+ELKKFCP GKH HRETR
Sbjct 1 MAKATDVRPKITLACVECKERNYITRKNRRNDPDRIELKKFCPRDGKHTVHRETR 55
>gi|152964632|ref|YP_001360416.1| 50S ribosomal protein L33 [Kineococcus radiotolerans SRS30216]
gi|218547276|sp|A6W5R3.1|RL333_KINRD RecName: Full=50S ribosomal protein L33 3
gi|151359149|gb|ABS02152.1| ribosomal protein L33 [Kineococcus radiotolerans SRS30216]
Length=55
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/55 (79%), Positives = 46/55 (84%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA +TDVRPKIT+AC CK RNYITKKNRRNDPDRL+L KFCP CGK HRETR
Sbjct 1 MAKTTDVRPKITMACTECKERNYITKKNRRNDPDRLDLAKFCPRCGKKTTHRETR 55
>gi|284034057|ref|YP_003383988.1| 50S ribosomal protein L33 [Kribbella flavida DSM 17836]
gi|283813350|gb|ADB35189.1| ribosomal protein L33 [Kribbella flavida DSM 17836]
Length=55
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/55 (79%), Positives = 46/55 (84%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA STD+RPKITLAC VCK RNYITKKNRRNDPDRLE+KK+C C H HRETR
Sbjct 1 MAKSTDIRPKITLACTVCKERNYITKKNRRNDPDRLEMKKYCARCNDHTDHRETR 55
>gi|238061141|ref|ZP_04605850.1| 50S ribosomal protein L33 [Micromonospora sp. ATCC 39149]
gi|330470191|ref|YP_004407934.1| 50S ribosomal protein L33 [Verrucosispora maris AB-18-032]
gi|237882952|gb|EEP71780.1| 50S ribosomal protein L33 [Micromonospora sp. ATCC 39149]
gi|328813162|gb|AEB47334.1| 50S ribosomal protein L33 [Verrucosispora maris AB-18-032]
Length=55
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/55 (79%), Positives = 47/55 (86%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA +TDVRPKITLAC CK RNYIT+KNRRNDPDR+ELKKFCP G+H HRETR
Sbjct 1 MAKATDVRPKITLACVECKERNYITRKNRRNDPDRIELKKFCPRDGRHTVHRETR 55
>gi|257069283|ref|YP_003155538.1| 50S ribosomal protein L33P [Brachybacterium faecium DSM 4810]
gi|256560101|gb|ACU85948.1| LSU ribosomal protein L33P [Brachybacterium faecium DSM 4810]
Length=56
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/56 (83%), Positives = 47/56 (84%), Gaps = 1/56 (1%)
Query 1 MAS-STDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MAS S+DVRPKITLAC CK RNYITKKNRRN PDRLEL KFCP CGK AHRETR
Sbjct 1 MASKSSDVRPKITLACVDCKARNYITKKNRRNTPDRLELSKFCPTCGKQTAHRETR 56
>gi|311744198|ref|ZP_07718002.1| 50S ribosomal protein L33 [Aeromicrobium marinum DSM 15272]
gi|311312371|gb|EFQ82284.1| 50S ribosomal protein L33 [Aeromicrobium marinum DSM 15272]
Length=56
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/56 (81%), Positives = 48/56 (86%), Gaps = 1/56 (1%)
Query 1 MAS-STDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MAS S+DVRPKITLAC CK RNYITKKNRRNDPDRL++KKFCP C HQ HRETR
Sbjct 1 MASKSSDVRPKITLACTECKERNYITKKNRRNDPDRLDIKKFCPRCKTHQVHRETR 56
>gi|145596453|ref|YP_001160750.1| 50S ribosomal protein L33 [Salinispora tropica CNB-440]
gi|218547264|sp|A4XBR5.1|RL332_SALTO RecName: Full=50S ribosomal protein L33 2
gi|145305790|gb|ABP56372.1| LSU ribosomal protein L33P [Salinispora tropica CNB-440]
Length=55
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/55 (79%), Positives = 47/55 (86%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA +TDVRPKITLAC CK RNYIT+KNRRNDPDR+ELKKFCP G+H HRETR
Sbjct 1 MAKATDVRPKITLACVECKERNYITRKNRRNDPDRIELKKFCPREGRHTIHRETR 55
>gi|159039853|ref|YP_001539106.1| 50S ribosomal protein L33 [Salinispora arenicola CNS-205]
gi|218547263|sp|A8M548.1|RL332_SALAI RecName: Full=50S ribosomal protein L33 2
gi|157918688|gb|ABW00116.1| ribosomal protein L33 [Salinispora arenicola CNS-205]
Length=55
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/55 (79%), Positives = 47/55 (86%), Gaps = 0/55 (0%)
Query 1 MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MA +TDVRPKITLAC CK RNYIT+KNRRNDPDR+ELKKFCP G+H HRETR
Sbjct 1 MAKATDVRPKITLACVECKERNYITRKNRRNDPDRIELKKFCPRDGRHTIHRETR 55
>gi|119714916|ref|YP_921881.1| 50S ribosomal protein L33 [Nocardioides sp. JS614]
gi|218547356|sp|A1SEF9.1|RL33_NOCSJ RecName: Full=50S ribosomal protein L33
gi|119535577|gb|ABL80194.1| LSU ribosomal protein L33P [Nocardioides sp. JS614]
Length=56
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/56 (83%), Positives = 47/56 (84%), Gaps = 1/56 (1%)
Query 1 MASST-DVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
MAS T DVRPKITLAC CK RNYITKKNRRNDPDR+EL KFCP C KH AHRETR
Sbjct 1 MASKTSDVRPKITLACVECKERNYITKKNRRNDPDRMELSKFCPRCRKHTAHRETR 56
>gi|72163066|ref|YP_290723.1| 50S ribosomal protein L33 [Thermobifida fusca YX]
gi|123774618|sp|Q47LH2.1|RL33_THEFY RecName: Full=50S ribosomal protein L33
gi|71916798|gb|AAZ56700.1| LSU ribosomal protein L33P [Thermobifida fusca YX]
Length=54
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/53 (78%), Positives = 48/53 (91%), Gaps = 0/53 (0%)
Query 3 SSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR 55
++TDVRPKITLAC+ CKHRNYIT+KNRRN PDRLEL+K+CPNC H+ HRETR
Sbjct 2 AATDVRPKITLACQECKHRNYITRKNRRNTPDRLELRKYCPNCRTHREHRETR 54
Lambda K H
0.321 0.132 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129422029068
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40