BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0638 Length=161 Score E Sequences producing significant alignments: (Bits) Value gi|31791822|ref|NP_854315.1| preprotein translocase subunit SecE... 317 3e-85 gi|254549598|ref|ZP_05140045.1| preprotein translocase subunit s... 316 7e-85 gi|289573242|ref|ZP_06453469.1| preprotein translocase subunit s... 315 1e-84 gi|289442032|ref|ZP_06431776.1| preprotein translocase subunit s... 315 2e-84 gi|340625657|ref|YP_004744109.1| putative preprotein translocase... 274 3e-72 gi|308231605|ref|ZP_07413085.2| preprotein translocase subunit s... 262 2e-68 gi|118616513|ref|YP_904845.1| preprotein translocase subunit Sec... 204 3e-51 gi|183980991|ref|YP_001849282.1| preprotein translocase (tail-an... 204 3e-51 gi|240169412|ref|ZP_04748071.1| preprotein translocase subunit S... 196 7e-49 gi|342858863|ref|ZP_08715517.1| preprotein translocase subunit S... 189 1e-46 gi|296168427|ref|ZP_06850307.1| preprotein translocase SecE subu... 178 3e-43 gi|41410208|ref|NP_963044.1| preprotein translocase subunit SecE... 176 8e-43 gi|118466490|ref|YP_883657.1| preprotein translocase subunit Sec... 175 2e-42 gi|15828021|ref|NP_302284.1| preprotein translocase subunit SecE... 169 1e-40 gi|254823018|ref|ZP_05228019.1| preprotein translocase subunit S... 162 1e-38 gi|13880187|gb|AAK44892.1| preprotein translocase SecE subunit [... 161 3e-38 gi|333989301|ref|YP_004521915.1| preprotein translocase (tail-an... 144 6e-33 gi|145225694|ref|YP_001136372.1| preprotein translocase subunit ... 139 1e-31 gi|315446045|ref|YP_004078924.1| protein translocase subunit sec... 138 2e-31 gi|126433558|ref|YP_001069249.1| preprotein translocase subunit ... 137 4e-31 gi|108797895|ref|YP_638092.1| preprotein translocase subunit Sec... 135 2e-30 gi|120402245|ref|YP_952074.1| preprotein translocase subunit Sec... 126 1e-27 gi|312141017|ref|YP_004008353.1| preprotein translocase sece [Rh... 97.8 5e-19 gi|118468481|ref|YP_885731.1| preprotein translocase subunit Sec... 97.4 6e-19 gi|226305204|ref|YP_002765162.1| preprotein translocase SecE sub... 95.5 2e-18 gi|229490697|ref|ZP_04384535.1| preprotein translocase subunit S... 95.1 3e-18 gi|226361073|ref|YP_002778851.1| preprotein translocase subunit ... 94.4 5e-18 gi|169630974|ref|YP_001704623.1| preprotein translocase subunit ... 92.8 2e-17 gi|262201103|ref|YP_003272311.1| preprotein translocase subunit ... 85.1 3e-15 gi|256380625|ref|YP_003104285.1| preprotein translocase subunit ... 84.7 4e-15 gi|319950478|ref|ZP_08024391.1| preprotein translocase subunit S... 83.6 9e-15 gi|159039850|ref|YP_001539103.1| preprotein translocase subunit ... 83.6 9e-15 gi|258651254|ref|YP_003200410.1| preprotein translocase subunit ... 82.8 2e-14 gi|343925624|ref|ZP_08765141.1| preprotein translocase SecE subu... 82.4 2e-14 gi|256390117|ref|YP_003111681.1| preprotein translocase subunit ... 80.1 1e-13 gi|145596450|ref|YP_001160747.1| preprotein translocase subunit ... 78.6 3e-13 gi|333918076|ref|YP_004491657.1| Preprotein translocase subunit ... 78.2 4e-13 gi|257054434|ref|YP_003132266.1| preprotein translocase, SecE su... 77.8 6e-13 gi|300782524|ref|YP_003762815.1| preprotein translocase SecE sub... 77.0 9e-13 gi|330470188|ref|YP_004407931.1| preprotein translocase subunit ... 75.9 2e-12 gi|296138473|ref|YP_003645716.1| preprotein translocase subunit ... 73.9 7e-12 gi|331699211|ref|YP_004335450.1| preprotein translocase subunit ... 73.6 8e-12 gi|296268524|ref|YP_003651156.1| preprotein translocase subunit ... 73.6 1e-11 gi|302523948|ref|ZP_07276290.1| hypothetical protein SSMG_00330 ... 73.2 1e-11 gi|325003300|ref|ZP_08124412.1| preprotein translocase subunit S... 72.0 3e-11 gi|111018978|ref|YP_701950.1| preprotein translocase subunit Sec... 69.7 1e-10 gi|326382995|ref|ZP_08204684.1| preprotein translocase subunit S... 68.9 2e-10 gi|336179798|ref|YP_004585173.1| preprotein translocase subunit ... 67.8 5e-10 gi|172039952|ref|YP_001799666.1| preprotein translocase subunit ... 67.4 6e-10 gi|271962614|ref|YP_003336810.1| hypothetical protein Sros_1067 ... 67.0 9e-10 >gi|31791822|ref|NP_854315.1| preprotein translocase subunit SecE [Mycobacterium bovis AF2122/97] gi|57116765|ref|YP_177743.1| preprotein translocase subunit SecE [Mycobacterium tuberculosis H37Rv] gi|121636559|ref|YP_976782.1| preprotein translocase subunit SecE [Mycobacterium bovis BCG str. Pasteur 1173P2] 50 more sequence titles Length=161 Score = 317 bits (813), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 160/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE Sbjct 1 MSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI Sbjct 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG Sbjct 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 >gi|254549598|ref|ZP_05140045.1| preprotein translocase subunit secE1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289760763|ref|ZP_06520141.1| preprotein translocase secE1 [Mycobacterium tuberculosis GM 1503] gi|289708269|gb|EFD72285.1| preprotein translocase secE1 [Mycobacterium tuberculosis GM 1503] Length=161 Score = 316 bits (810), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 159/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGDVADEAVADGAENAD+RGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE Sbjct 1 MSDEGDVADEAVADGAENADTRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI Sbjct 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG Sbjct 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 >gi|289573242|ref|ZP_06453469.1| preprotein translocase subunit secE1 [Mycobacterium tuberculosis K85] gi|289537673|gb|EFD42251.1| preprotein translocase subunit secE1 [Mycobacterium tuberculosis K85] Length=161 Score = 315 bits (807), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 159/161 (99%), Positives = 160/161 (99%), Gaps = 0/161 (0%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE Sbjct 1 MSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI Sbjct 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQMLTYTSVVLAFL FMVALVAGADLGLTKLVMLVFG Sbjct 121 WPNRKQMLTYTSVVLAFLPFMVALVAGADLGLTKLVMLVFG 161 >gi|289442032|ref|ZP_06431776.1| preprotein translocase subunit secE1 [Mycobacterium tuberculosis T46] gi|289568577|ref|ZP_06448804.1| preprotein translocase subunit secE1 [Mycobacterium tuberculosis T17] gi|289749141|ref|ZP_06508519.1| preprotein translocase secE1 [Mycobacterium tuberculosis T92] gi|289752682|ref|ZP_06512060.1| preprotein translocase subunit SecE [Mycobacterium tuberculosis EAS054] gi|289414951|gb|EFD12191.1| preprotein translocase subunit secE1 [Mycobacterium tuberculosis T46] gi|289542331|gb|EFD45979.1| preprotein translocase subunit secE1 [Mycobacterium tuberculosis T17] gi|289689728|gb|EFD57157.1| preprotein translocase secE1 [Mycobacterium tuberculosis T92] gi|289693269|gb|EFD60698.1| preprotein translocase subunit SecE [Mycobacterium tuberculosis EAS054] Length=161 Score = 315 bits (806), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 159/161 (99%), Positives = 160/161 (99%), Gaps = 0/161 (0%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE Sbjct 1 MSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI Sbjct 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQ LTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG Sbjct 121 WPNRKQTLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 >gi|340625657|ref|YP_004744109.1| putative preprotein translocase SECE1 [Mycobacterium canettii CIPT 140010059] gi|340003847|emb|CCC42977.1| putative preprotein translocase SECE1 [Mycobacterium canettii CIPT 140010059] Length=160 Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 159/161 (99%), Positives = 160/161 (99%), Gaps = 1/161 (0%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRA GADADVDVE Sbjct 1 MSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRA-GADADVDVE 59 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI Sbjct 60 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 119 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG Sbjct 120 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 160 >gi|308231605|ref|ZP_07413085.2| preprotein translocase subunit secE1 [Mycobacterium tuberculosis SUMu001] gi|308370465|ref|ZP_07421608.2| preprotein translocase subunit secE1 [Mycobacterium tuberculosis SUMu003] gi|308375216|ref|ZP_07443127.2| preprotein translocase subunit secE1 [Mycobacterium tuberculosis SUMu007] 9 more sequence titles Length=132 Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 131/132 (99%), Positives = 132/132 (100%), Gaps = 0/132 (0%) Query 30 LVTKPVVRPQRPTGKRSRSRAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAK 89 +VTKPVVRPQRPTGKRSRSRAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAK Sbjct 1 MVTKPVVRPQRPTGKRSRSRAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAK 60 Query 90 KASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGAD 149 KASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGAD Sbjct 61 KASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGAD 120 Query 150 LGLTKLVMLVFG 161 LGLTKLVMLVFG Sbjct 121 LGLTKLVMLVFG 132 >gi|118616513|ref|YP_904845.1| preprotein translocase subunit SecE [Mycobacterium ulcerans Agy99] gi|118568623|gb|ABL03374.1| preprotein translocase (tail-anchored membrane protein), SecE [Mycobacterium ulcerans Agy99] Length=162 Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 109/164 (67%), Positives = 123/164 (75%), Gaps = 5/164 (3%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGD A++A +DG D R SGGRTALVTK RPQRPTGKRSR RA A+ D D E Sbjct 1 MSDEGDAANDATSDGGATEDDRASGGRTALVTKSAARPQRPTGKRSRQRATAAE-DADDE 59 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKK---ASKPKARSVNPIAFVYNYLKQVVAEMR 117 + ST + AK D+ K SKAA+ KK ASKP AR+ +P FVYNYLKQVVAEMR Sbjct 60 QSSTEPQASEEGAKKDAK-KQTSKAAKDKKPKTASKPAARAASPFVFVYNYLKQVVAEMR 118 Query 118 KVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 KVIWPNRKQMLTYTSVVL FLAFMVALV ADLGL+KL++LVFG Sbjct 119 KVIWPNRKQMLTYTSVVLVFLAFMVALVGSADLGLSKLMLLVFG 162 >gi|183980991|ref|YP_001849282.1| preprotein translocase (tail-anchored membrane protein), SecE [Mycobacterium marinum M] gi|183174317|gb|ACC39427.1| preprotein translocase (tail-anchored membrane protein), SecE [Mycobacterium marinum M] Length=162 Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 109/164 (67%), Positives = 123/164 (75%), Gaps = 5/164 (3%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGD A++A +DG D R SGGRTALVTK RPQRPTGKRSR RA A+ D D E Sbjct 1 MSDEGDAANDATSDGGATEDDRASGGRTALVTKSAARPQRPTGKRSRQRATAAE-DADDE 59 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKK---ASKPKARSVNPIAFVYNYLKQVVAEMR 117 + ST + AK D+ K SKAA+ KK ASKP AR+ +P FVYNYLKQVVAEMR Sbjct 60 QSSTEPQASEEGAKKDAK-KETSKAAKDKKPKTASKPAARAASPFVFVYNYLKQVVAEMR 118 Query 118 KVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 KVIWPNRKQMLTYTSVVL FLAFMVALV ADLGL+KL++LVFG Sbjct 119 KVIWPNRKQMLTYTSVVLVFLAFMVALVGSADLGLSKLMLLVFG 162 >gi|240169412|ref|ZP_04748071.1| preprotein translocase subunit SecE [Mycobacterium kansasii ATCC 12478] Length=171 Score = 196 bits (499), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 108/173 (63%), Positives = 120/173 (70%), Gaps = 14/173 (8%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDE D AD A +DG D GGRTA+VTK VVRPQRPTGKRSR RA AD D + Sbjct 1 MSDERDAADGAASDGGATEDGSDGGGRTAVVTKSVVRPQRPTGKRSRQRAVEADEDAEDT 60 Query 61 EPSTAAS-EATGVAKDDSTTKAVSKAAR-----------AKKASKPKARSVNPIAFVYNY 108 EPSTA G AK D TK+ K+A+ KA +P ARS NP FVYNY Sbjct 61 EPSTATEVSKKGSAKKD--TKSAGKSAKTSAKKSVKAKKTTKAGRPAARSANPFIFVYNY 118 Query 109 LKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 +KQVVAEMRKVIWPNR+QM+TYTSVVL FLAFMVALV GADLGL +LVMLVFG Sbjct 119 IKQVVAEMRKVIWPNRRQMITYTSVVLVFLAFMVALVGGADLGLGRLVMLVFG 171 >gi|342858863|ref|ZP_08715517.1| preprotein translocase subunit SecE [Mycobacterium colombiense CECT 3035] gi|342133104|gb|EGT86307.1| preprotein translocase subunit SecE [Mycobacterium colombiense CECT 3035] Length=152 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 107/163 (66%), Positives = 119/163 (74%), Gaps = 13/163 (7%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGDVA++A +DG + D R SGGRTA+VT RPQRPTGKRSR RAA A D + Sbjct 1 MSDEGDVANDAASDGTDKEDGRASGGRTAVVT----RPQRPTGKRSRQRAAEAGDDAE-- 54 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKA--RSVNPIAFVYNYLKQVVAEMRK 118 S+A EA A + K SK AKKA+K +A VNP FVYNYLKQVVAEMRK Sbjct 55 --SSADVEA---AAPEKAKKGASKTGGAKKAAKSRAGDHRVNPFVFVYNYLKQVVAEMRK 109 Query 119 VIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 VIWPNRKQMLTYTSVVLAFLAFMVALV AD GLTKLV+LVFG Sbjct 110 VIWPNRKQMLTYTSVVLAFLAFMVALVGLADFGLTKLVLLVFG 152 >gi|296168427|ref|ZP_06850307.1| preprotein translocase SecE subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896721|gb|EFG76356.1| preprotein translocase SecE subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length=151 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/161 (63%), Positives = 113/161 (71%), Gaps = 10/161 (6%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGD A++A +DGA+ D R SGGRTA+VT RPQRPTGKRSR RA+ A DV Sbjct 1 MSDEGDAANDATSDGADREDDRASGGRTAVVT----RPQRPTGKRSRQRASDAGEGADV- 55 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 A+++ VAK+ TK K RS NP FVYNYLKQVVAEMRKVI Sbjct 56 ----ASADEAEVAKEAKATKGGKAKKAKKPKKPGD-RSANPFVFVYNYLKQVVAEMRKVI 110 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQMLTYTSVVLAFLAFMVALV AD GLTKLV+LVFG Sbjct 111 WPNRKQMLTYTSVVLAFLAFMVALVGLADFGLTKLVLLVFG 151 >gi|41410208|ref|NP_963044.1| preprotein translocase subunit SecE [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399042|gb|AAS06660.1| SecE [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460570|gb|EGO39463.1| preprotein translocase, SecE subunit [Mycobacterium avium subsp. paratuberculosis S397] Length=147 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 106/161 (66%), Positives = 119/161 (74%), Gaps = 14/161 (8%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGDVA++A +DGA+ D R GGRTA+VT RPQRPTGKRSR RAAG DAD Sbjct 1 MSDEGDVANDAASDGADTTDDRAGGGRTAVVT----RPQRPTGKRSRQRAAG-DADA--- 52 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 EPS EA A + + KAA+ KK++ +A NP FVYNYLKQVVAEMRKVI Sbjct 53 EPS---DEAEVSAPEKAEKAKRKKAAKPKKSADTRA---NPFVFVYNYLKQVVAEMRKVI 106 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQMLTYTSVVLAFLAFMVALV AD GLTKLV+LVFG Sbjct 107 WPNRKQMLTYTSVVLAFLAFMVALVGLADFGLTKLVLLVFG 147 >gi|118466490|ref|YP_883657.1| preprotein translocase subunit SecE [Mycobacterium avium 104] gi|254776959|ref|ZP_05218475.1| preprotein translocase subunit SecE [Mycobacterium avium subsp. avium ATCC 25291] gi|118167777|gb|ABK68674.1| translocase [Mycobacterium avium 104] Length=147 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 105/161 (66%), Positives = 118/161 (74%), Gaps = 14/161 (8%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGDVA++A +DGA+ D R GGRTA+VT RPQRPTGKRSR R AG DAD Sbjct 1 MSDEGDVANDAASDGADTTDDRAGGGRTAVVT----RPQRPTGKRSRQRTAG-DADA--- 52 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 EPS EA A + + KAA+ KK++ +A NP FVYNYLKQVVAEMRKVI Sbjct 53 EPS---DEAEVSAPEKAEKAKRKKAAKPKKSADTRA---NPFVFVYNYLKQVVAEMRKVI 106 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQMLTYTSVVLAFLAFMVALV AD GLTKLV+LVFG Sbjct 107 WPNRKQMLTYTSVVLAFLAFMVALVGLADFGLTKLVLLVFG 147 >gi|15828021|ref|NP_302284.1| preprotein translocase subunit SecE [Mycobacterium leprae TN] gi|221230498|ref|YP_002503914.1| preprotein translocase subunit SecE [Mycobacterium leprae Br4923] gi|14548259|sp|Q9CBJ9.1|SECE_MYCLE RecName: Full=Probable preprotein translocase subunit secE gi|13093574|emb|CAC30861.1| SecE preprotein translocase [Mycobacterium leprae] gi|219933605|emb|CAR72003.1| SecE preprotein translocase [Mycobacterium leprae Br4923] Length=146 Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 97/160 (61%), Positives = 109/160 (69%), Gaps = 19/160 (11%) Query 7 VADE--AVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGAD---ADVDVEE 61 ++DE A +DG G+ GRT +VTKP RPQRPTGKRSR RAA A A+V+VEE Sbjct 1 MSDERYAASDGGGTEVGSGTRGRTTVVTKPATRPQRPTGKRSRQRAANASNTGANVEVEE 60 Query 62 PSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIW 121 ST A A++K + KK K RS NPI F+YNYLKQVV EMRKVIW Sbjct 61 SSTQA--------------AIAKEGKVKKPKKSADRSANPIVFIYNYLKQVVGEMRKVIW 106 Query 122 PNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 PNRKQMLTYTSVVLAFLAFMVALV AD GL KLV+LVFG Sbjct 107 PNRKQMLTYTSVVLAFLAFMVALVGLADFGLAKLVLLVFG 146 >gi|254823018|ref|ZP_05228019.1| preprotein translocase subunit SecE [Mycobacterium intracellulare ATCC 13950] Length=151 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 101/161 (63%), Positives = 110/161 (69%), Gaps = 10/161 (6%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDEGDVA++A +DG + D R SG RTA+VT RPQRPTGKRSR +AA A D D Sbjct 1 MSDEGDVANDAASDGTDTTDGRASGVRTAVVT----RPQRPTGKRSRQKAADAGEDADAA 56 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 P EA+G K KA A K A NP FVYNYLKQVVAEMRKVI Sbjct 57 SPDEI--EASGKDKAKKGAKAKKAAKPKKSADS----RANPFLFVYNYLKQVVAEMRKVI 110 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQMLTYTSVVLAFLAFMVALV AD GLTKLV+LVFG Sbjct 111 WPNRKQMLTYTSVVLAFLAFMVALVGLADFGLTKLVLLVFG 151 >gi|13880187|gb|AAK44892.1| preprotein translocase SecE subunit [Mycobacterium tuberculosis CDC1551] Length=80 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 79/80 (99%), Positives = 80/80 (100%), Gaps = 0/80 (0%) Query 82 VSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFM 141 +SKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFM Sbjct 1 MSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFM 60 Query 142 VALVAGADLGLTKLVMLVFG 161 VALVAGADLGLTKLVMLVFG Sbjct 61 VALVAGADLGLTKLVMLVFG 80 >gi|333989301|ref|YP_004521915.1| preprotein translocase (tail-anchored membrane protein) SecE [Mycobacterium sp. JDM601] gi|333485269|gb|AEF34661.1| preprotein translocase (tail-anchored membrane protein) SecE [Mycobacterium sp. JDM601] Length=149 Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 94/161 (59%), Positives = 108/161 (68%), Gaps = 13/161 (8%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 ++DE D D A A G ADS G G RTA+ + V P RPTGKRSR R A AD DV Sbjct 1 MTDELDRPD-AAAGGDSEADSTGHG-RTAVASMQVGAPLRPTGKRSRRRGA---ADDDVA 55 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 E + A+E G DD+ V KA +AKK S +R NP FV NYLKQVV E+RKVI Sbjct 56 ELESTATELGG---DDA---GVKKAKKAKKKSDGPSR--NPFVFVLNYLKQVVGELRKVI 107 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQM+TYT+VVLAFL FMVALVAGAD G KL++LVFG Sbjct 108 WPNRKQMVTYTAVVLAFLVFMVALVAGADYGFAKLILLVFG 148 >gi|145225694|ref|YP_001136372.1| preprotein translocase subunit SecE [Mycobacterium gilvum PYR-GCK] gi|145218180|gb|ABP47584.1| protein translocase subunit secE/sec61 gamma [Mycobacterium gilvum PYR-GCK] Length=151 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/161 (51%), Positives = 101/161 (63%), Gaps = 12/161 (7%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDE D A D D + G+TA+VT RPQRPTGKRSR RA AD D D E Sbjct 1 MSDERDGVSSADTDNGTETDDGDNRGQTAVVT----RPQRPTGKRSR-RAVEADDDAD-E 54 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKAR-SVNPIAFVYNYLKQVVAEMRKV 119 P T +S +G DD AR K + +PK + S NPIAFV NYLK+V+ E+RKV Sbjct 55 SPETDSS-GSGSKDDDGR----GPKARKKTSKRPKDQPSRNPIAFVINYLKEVLGELRKV 109 Query 120 IWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVF 160 IWPNRK+M+ YT+ VL FL FMVA++ G DLGL +L+ +F Sbjct 110 IWPNRKEMIAYTTTVLFFLIFMVAMIGGVDLGLARLITWIF 150 >gi|315446045|ref|YP_004078924.1| protein translocase subunit secE/sec61 gamma [Mycobacterium sp. Spyr1] gi|315264348|gb|ADU01090.1| protein translocase subunit secE/sec61 gamma [Mycobacterium sp. Spyr1] Length=151 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/161 (50%), Positives = 101/161 (63%), Gaps = 12/161 (7%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDE D A D D + G+TA+VT RPQRPTGKRSR RA AD D D E Sbjct 1 MSDERDGVSSADTDNGTETDDGDNRGQTAVVT----RPQRPTGKRSR-RAVEADDDAD-E 54 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKAR-SVNPIAFVYNYLKQVVAEMRKV 119 P T +S +G DD AR K + +PK + S NPIAFV NYLK+V+ E+RKV Sbjct 55 SPETDSS-GSGSKDDDGR----GPKARKKTSKRPKDQPSRNPIAFVINYLKEVLGELRKV 109 Query 120 IWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVF 160 IWPNRK+M+ YT+ VL FL FMVA++ G D+GL +L+ +F Sbjct 110 IWPNRKEMIAYTTTVLFFLIFMVAMIGGVDIGLARLITWIF 150 >gi|126433558|ref|YP_001069249.1| preprotein translocase subunit SecE [Mycobacterium sp. JLS] gi|126233358|gb|ABN96758.1| protein translocase subunit secE/sec61 gamma [Mycobacterium sp. JLS] Length=147 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 85/167 (51%), Positives = 104/167 (63%), Gaps = 27/167 (16%) Query 1 VSDEGDVA------DEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGAD 54 +SDE D A D+A DG + D+RG +TA+VT RP RPTGKR+R A D Sbjct 1 MSDERDSAGSAGTGDDAGTDGVD--DTRG---QTAVVT----RPLRPTGKRTRRAAVETD 51 Query 55 ADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVA 114 A+ D +T +E++G T K K A K R NP FV NY+KQVVA Sbjct 52 AESD----ATELTESSGTENGSGTKK--------KTAKKEPGRYPNPFLFVVNYIKQVVA 99 Query 115 EMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 E+RKVIWPNRKQM++YTSVVL FLAFMVAL+AG D G+ +LV LVFG Sbjct 100 ELRKVIWPNRKQMVSYTSVVLVFLAFMVALIAGFDYGMARLVGLVFG 146 >gi|108797895|ref|YP_638092.1| preprotein translocase subunit SecE [Mycobacterium sp. MCS] gi|119866990|ref|YP_936942.1| preprotein translocase subunit SecE [Mycobacterium sp. KMS] gi|108768314|gb|ABG07036.1| protein translocase subunit secE/sec61 gamma [Mycobacterium sp. MCS] gi|119693079|gb|ABL90152.1| protein translocase subunit secE/sec61 gamma [Mycobacterium sp. KMS] Length=147 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/162 (52%), Positives = 100/162 (62%), Gaps = 17/162 (10%) Query 1 VSDEGDVADEA-VADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDV 59 +SDE D A A + AE + G+TA+VT RP RPTGKR+R RAA + D Sbjct 1 MSDERDSAGSAGTGNDAETDGVDDTRGQTAVVT----RPLRPTGKRTR-RAA---VETDA 52 Query 60 EEPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKV 119 E +T +E+ G T K K A K R NP FV NY+KQVVAE+RKV Sbjct 53 ESEATELTESAGTENGSGTKK--------KTAKKEPGRYPNPFLFVVNYIKQVVAELRKV 104 Query 120 IWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 IWPNRKQM++YTSVVL FLAFMVAL+AG D G+ +LV LVFG Sbjct 105 IWPNRKQMVSYTSVVLVFLAFMVALIAGFDYGMARLVGLVFG 146 >gi|120402245|ref|YP_952074.1| preprotein translocase subunit SecE [Mycobacterium vanbaalenii PYR-1] gi|119955063|gb|ABM12068.1| protein translocase subunit secE/sec61 gamma [Mycobacterium vanbaalenii PYR-1] Length=147 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/160 (48%), Positives = 91/160 (57%), Gaps = 14/160 (8%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDE D A D D G G+TA+VT RP RPTGKRSR DAD Sbjct 1 MSDERDGVSSADTDSGGQTDD-GDRGQTAVVT----RPLRPTGKRSRRAGEAGDAD---- 51 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 ++++G DD + K K P S NP+ FV NYLK+VV E+RKVI Sbjct 52 --KAPEADSSGSKDDDGSGPKAKKKTAKKPKDGP---SRNPLVFVINYLKEVVGELRKVI 106 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVF 160 WPNRK+M TYT+VVL FL FMVAL+ G DLGL KLV +F Sbjct 107 WPNRKEMATYTTVVLLFLVFMVALIGGVDLGLGKLVTWIF 146 >gi|312141017|ref|YP_004008353.1| preprotein translocase sece [Rhodococcus equi 103S] gi|325675346|ref|ZP_08155030.1| preprotein translocase SecE subunit [Rhodococcus equi ATCC 33707] gi|311890356|emb|CBH49674.1| putative preprotein translocase SecE [Rhodococcus equi 103S] gi|325553317|gb|EGD22995.1| preprotein translocase SecE subunit [Rhodococcus equi ATCC 33707] Length=162 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 66/163 (41%), Positives = 93/163 (58%), Gaps = 16/163 (9%) Query 2 SDEGDVADE---AVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVD 58 +D G V D A + A +D GS A + VV +P+GKR+ R++ D Sbjct 13 TDPGAVGDSEAGASSRPAAGSDQSGSQAPEAAASAGVVPSGKPSGKRAARRSSTED---- 68 Query 59 VEEPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRK 118 +P+ A A+ V +S K V+K + KA KP RS N + +L++VVAE+RK Sbjct 69 --QPAKKAVAASSVKSPES--KPVAKTS---KADKP--RSENIFKRIRRFLREVVAELRK 119 Query 119 VIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 VIWPNRKQM+TYTSVVL F+AFMV ++ D+G K + +FG Sbjct 120 VIWPNRKQMITYTSVVLVFVAFMVTFISLLDIGFGKGISWLFG 162 >gi|118468481|ref|YP_885731.1| preprotein translocase subunit SecE [Mycobacterium smegmatis str. MC2 155] gi|118169768|gb|ABK70664.1| translocase [Mycobacterium smegmatis str. MC2 155] Length=144 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 76/161 (48%), Positives = 93/161 (58%), Gaps = 18/161 (11%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDE + A A G + + + G+TA+VT+P+ RPTGKR+R R D Sbjct 1 MSDEREGAGSADDTGTDTDGTGETRGQTAVVTRPL----RPTGKRAR-RGVAESTD---- 51 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 T + K AS P S NPI FV NYLKQVVAE+RKVI Sbjct 52 ------EPETAAEAAAAVEAGGKAKKVKKDASGP---SRNPIMFVVNYLKQVVAELRKVI 102 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQM++YT+VVL FL FMVAL+AGAD GL +LV LVFG Sbjct 103 WPNRKQMVSYTTVVLVFLVFMVALIAGADYGLARLVSLVFG 143 >gi|226305204|ref|YP_002765162.1| preprotein translocase SecE subunit [Rhodococcus erythropolis PR4] gi|226184319|dbj|BAH32423.1| probable preprotein translocase SecE subunit [Rhodococcus erythropolis PR4] Length=127 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/148 (42%), Positives = 81/148 (55%), Gaps = 24/148 (16%) Query 14 DGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVEEPSTAASEATGVA 73 DGAE A S SG +PTGKR+ +R A A V+ P+ AS T A Sbjct 4 DGAEKAPSASSGVS-----------NKPTGKRA-ARGASVSAST-VKTPARTASR-TSSA 49 Query 74 KDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSV 133 K +T KPKA+ N + + ++V+AE+RKVIWPNRKQM+TYTSV Sbjct 50 KPTATNPG----------KKPKAKKDNIFKRLRKFFREVIAELRKVIWPNRKQMITYTSV 99 Query 134 VLAFLAFMVALVAGADLGLTKLVMLVFG 161 VL F+ FMVA ++G D+ + K V +FG Sbjct 100 VLTFVVFMVAFISGVDIAVIKGVTWLFG 127 >gi|229490697|ref|ZP_04384535.1| preprotein translocase subunit SecE [Rhodococcus erythropolis SK121] gi|229322517|gb|EEN88300.1| preprotein translocase subunit SecE [Rhodococcus erythropolis SK121] Length=167 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/148 (42%), Positives = 81/148 (55%), Gaps = 24/148 (16%) Query 14 DGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVEEPSTAASEATGVA 73 DGAE A S SG +PTGKR+ +R A A V+ P+ AS T A Sbjct 44 DGAEKAPSASSGVS-----------NKPTGKRA-ARGASVSAST-VKTPARTASR-TSSA 89 Query 74 KDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSV 133 K +T KPKA+ N + + ++V+AE+RKVIWPNRKQM+TYTSV Sbjct 90 KPTATNPG----------KKPKAKKDNIFKRLRKFFREVIAELRKVIWPNRKQMITYTSV 139 Query 134 VLAFLAFMVALVAGADLGLTKLVMLVFG 161 VL F+ FMVA ++G D+ + K V +FG Sbjct 140 VLTFVVFMVAFISGVDIAVIKGVTWLFG 167 >gi|226361073|ref|YP_002778851.1| preprotein translocase subunit SecE [Rhodococcus opacus B4] gi|226239558|dbj|BAH49906.1| preprotein translocase SecE subunit [Rhodococcus opacus B4] Length=158 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/122 (46%), Positives = 74/122 (61%), Gaps = 10/122 (8%) Query 40 RPTGKRSRSRAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSV 99 +P+GKR R+ A D+ S A E K D+TTK K+A+ +A KP R Sbjct 47 KPSGKRQGRRSP---AGTDISASSVKAPEQ---PKSDTTTKV--KSAKKDRADKP--RKE 96 Query 100 NPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLV 159 N + +L++V+AE+RKVIWPNRKQM+TYTSVVLAF+ FMV + DL + K V + Sbjct 97 NIFKRLRRFLREVIAELRKVIWPNRKQMITYTSVVLAFVVFMVTFIGVLDLAVIKGVTWL 156 Query 160 FG 161 FG Sbjct 157 FG 158 >gi|169630974|ref|YP_001704623.1| preprotein translocase subunit SecE [Mycobacterium abscessus ATCC 19977] gi|169242941|emb|CAM63969.1| Probable preprotein translocase SecE subunit [Mycobacterium abscessus] Length=139 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/161 (46%), Positives = 93/161 (58%), Gaps = 22/161 (13%) Query 1 VSDEGDVADEAVADGAENADSRGSGGRTALVTKPVVRPQRPTGKRSRSRAAGADADVDVE 60 +SDE D D AD R TKP+ RPTGKR+R ADA V Sbjct 1 MSDELDEPDIGTADS----------DRAVTSTKPL----RPTGKRTRR----ADATEAVT 42 Query 61 EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVI 120 E S A++ TG K + K+ A + K+ S NP+ ++ +L+QVVAE+RKVI Sbjct 43 EGSEASASETGEVKKKAGKKSRKPANKKDKSGP----SRNPLVQLWVFLQQVVAELRKVI 98 Query 121 WPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 WPNRKQM++YTSVVL FL FMV L+ DLGL +LVMLVFG Sbjct 99 WPNRKQMVSYTSVVLVFLVFMVTLIGVIDLGLARLVMLVFG 139 >gi|262201103|ref|YP_003272311.1| preprotein translocase subunit SecE [Gordonia bronchialis DSM 43247] gi|262084450|gb|ACY20418.1| preprotein translocase, SecE subunit [Gordonia bronchialis DSM 43247] Length=158 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/124 (42%), Positives = 67/124 (55%), Gaps = 16/124 (12%) Query 40 RPTGKRSRS--RAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKAR 97 RP+GKRS R+AGA D G D AV+ R KK P Sbjct 49 RPSGKRSARGRRSAGAVTD--------------GDDADAEGGSAVAVKERKKKKKVPAEE 94 Query 98 SVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVM 157 S NP ++ +L QVVAE++KVIWP R++M+TYT VVL F+ M A ++G DL K V+ Sbjct 95 SRNPFTRIWVFLTQVVAELKKVIWPTRREMITYTIVVLVFVIVMTAFISGIDLAFAKGVL 154 Query 158 LVFG 161 +FG Sbjct 155 WLFG 158 >gi|256380625|ref|YP_003104285.1| preprotein translocase subunit SecE [Actinosynnema mirum DSM 43827] gi|255924928|gb|ACU40439.1| preprotein translocase, SecE subunit [Actinosynnema mirum DSM 43827] Length=136 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/88 (47%), Positives = 58/88 (66%), Gaps = 1/88 (1%) Query 74 KDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSV 133 K DST+ + +K + + + K + N A + Y+++VV E+RKVIWP RKQM+TYTSV Sbjct 50 KVDSTSDS-AKKGKPTRTREGKEKRPNIFARFFRYIREVVGELRKVIWPTRKQMVTYTSV 108 Query 134 VLAFLAFMVALVAGADLGLTKLVMLVFG 161 VL F+AFM ALV G D+ + V +FG Sbjct 109 VLVFVAFMTALVFGLDIAFAEGVFWLFG 136 >gi|319950478|ref|ZP_08024391.1| preprotein translocase subunit SecE [Dietzia cinnamea P4] gi|319435837|gb|EFV91044.1| preprotein translocase subunit SecE [Dietzia cinnamea P4] Length=113 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 51/110 (47%), Positives = 59/110 (54%), Gaps = 7/110 (6%) Query 54 DADVDVE---EPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLK 110 D DVDV + AA+ TG A T A A K + NP + Y+ Sbjct 6 DDDVDVNGVRDSDAAAAVPTGKAGRGDTAVAGRVRTDADKPEDTRTARANP----FQYIG 61 Query 111 QVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVF 160 QVV E+RKVIWP R QM+TYT VV FL FM ALV+G D G KLV LVF Sbjct 62 QVVEELRKVIWPTRNQMVTYTIVVFLFLIFMTALVSGVDFGAGKLVELVF 111 >gi|159039850|ref|YP_001539103.1| preprotein translocase subunit SecE [Salinispora arenicola CNS-205] gi|157918685|gb|ABW00113.1| preprotein translocase, SecE subunit [Salinispora arenicola CNS-205] Length=125 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 38/85 (45%), Positives = 59/85 (70%), Gaps = 4/85 (4%) Query 81 AVSKAARAKKASKPKARSVN----PIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLA 136 A ++RA+ + +PK R+ P + ++++VVAE+RKVIWP RK++LTYT+VV+ Sbjct 38 ATRSSSRAESSDRPKTRTQGERGGPFGRIVRFVREVVAELRKVIWPTRKELLTYTAVVIV 97 Query 137 FLAFMVALVAGADLGLTKLVMLVFG 161 F+A M+A+VAG DL + V+ VFG Sbjct 98 FVAVMLAIVAGLDLAFAEGVLWVFG 122 >gi|258651254|ref|YP_003200410.1| preprotein translocase subunit SecE [Nakamurella multipartita DSM 44233] gi|258554479|gb|ACV77421.1| preprotein translocase, SecE subunit [Nakamurella multipartita DSM 44233] Length=168 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/76 (53%), Positives = 51/76 (68%), Gaps = 0/76 (0%) Query 86 ARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALV 145 A K+ S + NP A + +L++VVAE+RKVIWP+R QM+TYT VV+AF+ FMVALV Sbjct 93 ATPKRGSTTAVKKPNPFARLGRFLREVVAELRKVIWPSRNQMVTYTIVVIAFVTFMVALV 152 Query 146 AGADLGLTKLVMLVFG 161 DL K V VFG Sbjct 153 GVLDLLFAKGVFAVFG 168 >gi|343925624|ref|ZP_08765141.1| preprotein translocase SecE subunit [Gordonia alkanivorans NBRC 16433] gi|343764414|dbj|GAA12067.1| preprotein translocase SecE subunit [Gordonia alkanivorans NBRC 16433] Length=159 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/160 (39%), Positives = 82/160 (52%), Gaps = 19/160 (11%) Query 5 GDVADEAVA--DGAENADSRGSGGRTALVTKPVVRPQRPTGKRS-RSRAAGADADVDVEE 61 G AD A A DG + A +GG + + RP+GKRS R R Sbjct 16 GSAADSAAAELDGRDEA----TGGADDETSTGAAKELRPSGKRSARGR-----------R 60 Query 62 PSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIW 121 ST AS G D +T AV+ R KK S NP ++ +L QVVAE++KVIW Sbjct 61 SSTGASGTDG-DTDSATGSAVAVKERKKKKKASAEESRNPFVRIWVFLTQVVAELKKVIW 119 Query 122 PNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 P R++M+TYT VVL F+ M A ++G DL K V+ +FG Sbjct 120 PTRREMITYTIVVLVFVIVMTAFISGLDLAFAKGVLWLFG 159 >gi|256390117|ref|YP_003111681.1| preprotein translocase subunit SecE [Catenulispora acidiphila DSM 44928] gi|256356343|gb|ACU69840.1| preprotein translocase, SecE subunit [Catenulispora acidiphila DSM 44928] Length=89 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/87 (42%), Positives = 57/87 (66%), Gaps = 0/87 (0%) Query 75 DDSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVV 134 + S+T A+SK R + + R +P+ + + +Q++AE+RKV+WP R ++ TYT+VV Sbjct 3 ETSSTSAMSKPDRGRGGDRRPERRRSPLGRMSLFYRQIIAELRKVVWPTRNELTTYTTVV 62 Query 135 LAFLAFMVALVAGADLGLTKLVMLVFG 161 + F+A MV +VA D G +KLV VFG Sbjct 63 IVFVAIMVGIVATLDYGFSKLVEWVFG 89 >gi|145596450|ref|YP_001160747.1| preprotein translocase subunit SecE [Salinispora tropica CNB-440] gi|145305787|gb|ABP56369.1| preprotein translocase, SecE subunit [Salinispora tropica CNB-440] Length=126 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/85 (50%), Positives = 60/85 (71%), Gaps = 4/85 (4%) Query 81 AVSKAARAKKASKPKARS----VNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLA 136 A S +RA+ +PK+R+ V PI V ++++VVAE+RKVIWP RK++LTY SVV+ Sbjct 39 ATSSQSRAESVDRPKSRTQGDKVGPIGRVVRFVREVVAELRKVIWPTRKELLTYASVVIV 98 Query 137 FLAFMVALVAGADLGLTKLVMLVFG 161 F+A M+A+VAG DL + V+ VFG Sbjct 99 FVAVMLAIVAGLDLAFAEGVLWVFG 123 >gi|333918076|ref|YP_004491657.1| Preprotein translocase subunit SecE [Amycolicicoccus subflavus DQS3-9A1] gi|333480297|gb|AEF38857.1| Preprotein translocase subunit SecE [Amycolicicoccus subflavus DQS3-9A1] Length=125 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 47/66 (72%), Gaps = 0/66 (0%) Query 96 ARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKL 155 R NPI + +L++V++E+RKVIWPNRKQM+TYT VV FL FMV+L+ G D + Sbjct 60 GRRENPIQAMVRFLREVISELRKVIWPNRKQMVTYTIVVFVFLIFMVSLIFGLDQVFARG 119 Query 156 VMLVFG 161 V+ ++G Sbjct 120 VLWLYG 125 >gi|257054434|ref|YP_003132266.1| preprotein translocase, SecE subunit [Saccharomonospora viridis DSM 43017] gi|256584306|gb|ACU95439.1| preprotein translocase, SecE subunit [Saccharomonospora viridis DSM 43017] Length=151 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 38/86 (45%), Positives = 54/86 (63%), Gaps = 0/86 (0%) Query 76 DSTTKAVSKAARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVL 135 + T K K K ++ A+ + + + ++++V E+RKVIWP RKQM+TYT+VVL Sbjct 65 EKTAKPEGKGGPTPKRNRKDAKKGSLFSRIGRFIREVWGELRKVIWPTRKQMVTYTTVVL 124 Query 136 AFLAFMVALVAGADLGLTKLVMLVFG 161 FL FMVALVAG D + V +VFG Sbjct 125 LFLVFMVALVAGLDFVFLEGVDVVFG 150 >gi|300782524|ref|YP_003762815.1| preprotein translocase SecE subunit [Amycolatopsis mediterranei U32] gi|299792038|gb|ADJ42413.1| preprotein translocase SecE subunit [Amycolatopsis mediterranei U32] gi|340523894|gb|AEK39099.1| preprotein translocase SecE subunit [Amycolatopsis mediterranei S699] Length=146 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 39/77 (51%), Positives = 51/77 (67%), Gaps = 2/77 (2%) Query 85 AARAKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVAL 144 A K+ KPK SV A + ++++V AE+RKVIWPNRKQM+TYT VVLAF+ FMV L Sbjct 72 APTPKRDQKPKKTSV--FARLMRFIREVWAELRKVIWPNRKQMVTYTVVVLAFVVFMVGL 129 Query 145 VAGADLGLTKLVMLVFG 161 V+ DL + +FG Sbjct 130 VSVLDLAFKWGIGKIFG 146 >gi|330470188|ref|YP_004407931.1| preprotein translocase subunit SecE [Verrucosispora maris AB-18-032] gi|328813159|gb|AEB47331.1| preprotein translocase, sece subunit [Verrucosispora maris AB-18-032] Length=130 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/92 (43%), Positives = 58/92 (64%), Gaps = 2/92 (2%) Query 72 VAKDDSTTKAVSKAARAKKASKPKA--RSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLT 129 V + + T+ +KA A SK +A V + ++++VVAE+RKVIWP RK++LT Sbjct 36 VTRGGTATRERAKAESADSRSKTRADGEKVGLFGRIARFIREVVAELRKVIWPTRKELLT 95 Query 130 YTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 YT VV+AF++ M+A+VA D K V+ VFG Sbjct 96 YTGVVIAFVSMMLAIVALLDFAFAKGVLWVFG 127 >gi|296138473|ref|YP_003645716.1| preprotein translocase subunit SecE [Tsukamurella paurometabola DSM 20162] gi|296026607|gb|ADG77377.1| preprotein translocase, SecE subunit [Tsukamurella paurometabola DSM 20162] Length=125 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/126 (40%), Positives = 68/126 (54%), Gaps = 22/126 (17%) Query 36 VRPQRPTGKRSRSRAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAKKASKPK 95 V+ RPTGKR R +TA +E TK V++ A + KP Sbjct 22 VKQARPTGKRGGRRG------------NTALAE--------QVTKGVTEYASRNEPEKPP 61 Query 96 ARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKL 155 R NP A ++ +L+QVVAE+RKVIWP R QM+ YT +VL F+ + A V+ DLG KL Sbjct 62 RR--NPFAAIWLFLRQVVAELRKVIWPTRSQMINYTIIVLVFVVVLTAFVSLLDLGFAKL 119 Query 156 VMLVFG 161 ++ FG Sbjct 120 MLWAFG 125 >gi|331699211|ref|YP_004335450.1| preprotein translocase subunit SecE [Pseudonocardia dioxanivorans CB1190] gi|326953900|gb|AEA27597.1| preprotein translocase, SecE subunit [Pseudonocardia dioxanivorans CB1190] Length=114 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/54 (62%), Positives = 42/54 (78%), Gaps = 0/54 (0%) Query 108 YLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 +L++VVAE+RKVIWP R QM+TYT VVL F++FMVALVAG D + + VFG Sbjct 60 FLREVVAELRKVIWPTRNQMVTYTIVVLVFVSFMVALVAGLDFVFGQAIGAVFG 113 >gi|296268524|ref|YP_003651156.1| preprotein translocase subunit SecE [Thermobispora bispora DSM 43833] gi|296091311|gb|ADG87263.1| preprotein translocase, SecE subunit [Thermobispora bispora DSM 43833] Length=85 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/74 (48%), Positives = 51/74 (69%), Gaps = 4/74 (5%) Query 88 AKKASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAG 147 K A + KA+ +P+ F +QVVAE+RKVIWP R +++TYT+VVL F+ MV +V G Sbjct 14 GKAAGQKKAKRTSPVLF----YRQVVAELRKVIWPRRNELITYTAVVLVFVLIMVGIVFG 69 Query 148 ADLGLTKLVMLVFG 161 D + K+V++VFG Sbjct 70 LDTLMGKVVLMVFG 83 >gi|302523948|ref|ZP_07276290.1| hypothetical protein SSMG_00330 [Streptomyces sp. AA4] gi|302432843|gb|EFL04659.1| hypothetical protein SSMG_00330 [Streptomyces sp. AA4] Length=146 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/102 (50%), Positives = 66/102 (65%), Gaps = 3/102 (2%) Query 61 EPSTAASEATGVAKDDSTTKAVSKAA-RAKKASKPKARSVNPIAFVYNYLKQVVAEMRKV 119 E ++ +G A D A +K A K+ KPK SV A ++++V AE+RKV Sbjct 47 EARPGSTRPSGKAGDKVAKPADAKGAPTPKRDRKPKKASV--FARFTRFIREVWAELRKV 104 Query 120 IWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMLVFG 161 IWPNRKQM+TYT+VVL F+ FMVALV+G DLG +LV LVFG Sbjct 105 IWPNRKQMVTYTAVVLVFVVFMVALVSGLDLGFKELVGLVFG 146 >gi|325003300|ref|ZP_08124412.1| preprotein translocase subunit SecE [Pseudonocardia sp. P1] Length=115 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/72 (48%), Positives = 47/72 (66%), Gaps = 0/72 (0%) Query 90 KASKPKARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGAD 149 +A+ K + +P A + +L++VVAE+RKVIWPNR QM+ YT VL F+ FMV LV D Sbjct 43 RATATKEKKASPFARIARFLREVVAELRKVIWPNRSQMVKYTIAVLVFVTFMVTLVFLLD 102 Query 150 LGLTKLVMLVFG 161 + V L+FG Sbjct 103 SAFAEGVALLFG 114 >gi|111018978|ref|YP_701950.1| preprotein translocase subunit SecE [Rhodococcus jostii RHA1] gi|110818508|gb|ABG93792.1| probable protein translocation complex preprotein translocase subunit [Rhodococcus jostii RHA1] Length=150 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/124 (43%), Positives = 74/124 (60%), Gaps = 14/124 (11%) Query 40 RPTGKRS--RSRAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKAR 97 +P+GKR RS+A A V+ P ++K D+TTK + A+ +A KP R Sbjct 39 KPSGKRQGRRSQAGTEVAASSVKSPE--------LSKSDTTTKV--RPAKKDRADKP--R 86 Query 98 SVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVM 157 N + +L++V+AE+RKVIWPNRKQM+TYTSVVL F+ FMV + DL + K V Sbjct 87 KENIFKRLRRFLREVIAELRKVIWPNRKQMITYTSVVLVFVVFMVTFIGVLDLVVIKGVT 146 Query 158 LVFG 161 +FG Sbjct 147 WLFG 150 >gi|326382995|ref|ZP_08204684.1| preprotein translocase subunit SecE [Gordonia neofelifaecis NRRL B-59395] gi|326198131|gb|EGD55316.1| preprotein translocase subunit SecE [Gordonia neofelifaecis NRRL B-59395] Length=127 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/123 (40%), Positives = 63/123 (52%), Gaps = 26/123 (21%) Query 40 RPTGKRS-RSRAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAKKASKPKARS 98 RP+GKRS R R A AT VA+ S + A A S Sbjct 30 RPSGKRSARGR--------------RGAGSATAVAERTSESTATDTRA-----------S 64 Query 99 VNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVML 158 NP ++ +LKQVV+EMRKV+WP R +M+ Y V AF+ + A +AG D+G KL +L Sbjct 65 RNPFVRIWIFLKQVVSEMRKVVWPTRNEMVNYVIAVFAFVVVVTAFIAGLDIGFAKLTLL 124 Query 159 VFG 161 VFG Sbjct 125 VFG 127 >gi|336179798|ref|YP_004585173.1| preprotein translocase subunit SecE [Frankia symbiont of Datisca glomerata] gi|334860778|gb|AEH11252.1| preprotein translocase, SecE subunit [Frankia symbiont of Datisca glomerata] Length=82 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/78 (45%), Positives = 49/78 (63%), Gaps = 5/78 (6%) Query 85 AARAKKASKPKARS-VNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVA 143 A RA + S+P R P+ F ++VVAE+RKV++P R +++TY VVL F + VA Sbjct 9 APRAGRPSRPAGRRRTTPLRF----YREVVAELRKVVYPGRSELVTYVIVVLVFCSITVA 64 Query 144 LVAGADLGLTKLVMLVFG 161 VA D GLTK V+ +FG Sbjct 65 FVASLDFGLTKAVLAIFG 82 >gi|172039952|ref|YP_001799666.1| preprotein translocase subunit SecE [Corynebacterium urealyticum DSM 7109] gi|171851256|emb|CAQ04232.1| preprotein translocase SecE subunit [Corynebacterium urealyticum DSM 7109] Length=95 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/80 (49%), Positives = 49/80 (62%), Gaps = 5/80 (6%) Query 86 ARAKKASKP----KARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFM 141 ARA AS + RS NP + +YL+ V++EMRKVIWP ++M+TY+ VVL FL M Sbjct 16 ARATSASTSPEVVETRS-NPFTAIADYLRGVISEMRKVIWPTGREMVTYSLVVLVFLILM 74 Query 142 VALVAGADLGLTKLVMLVFG 161 ALVAG D V VFG Sbjct 75 TALVAGVDYVTGLGVRWVFG 94 >gi|271962614|ref|YP_003336810.1| hypothetical protein Sros_1067 [Streptosporangium roseum DSM 43021] gi|270505789|gb|ACZ84067.1| hypothetical protein Sros_1067 [Streptosporangium roseum DSM 43021] Length=82 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 35/79 (45%), Positives = 50/79 (64%), Gaps = 8/79 (10%) Query 87 RAKKASKP----KARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMV 142 R + A KP KA+ +P F +QVVAE+RKVIWP RK +++YT +VL F+ MV Sbjct 6 RGETADKPSGEKKAKRTSPALF----YRQVVAELRKVIWPTRKDLISYTIIVLVFVLIMV 61 Query 143 ALVAGADLGLTKLVMLVFG 161 +V+G D T+ V+ +FG Sbjct 62 GIVSGLDAVFTEGVLRIFG 80 Lambda K H 0.313 0.126 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131112251088 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40