BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0653c Length=231 Score E Sequences producing significant alignments: (Bits) Value gi|15840056|ref|NP_335093.1| transcriptional repressor, putative... 469 1e-130 gi|253797593|ref|YP_003030594.1| transcriptional regulator, tetR... 469 2e-130 gi|289744371|ref|ZP_06503749.1| TetR family transcriptional regu... 468 3e-130 gi|15607793|ref|NP_215167.1| TetR family transcriptional regulat... 468 4e-130 gi|289552907|ref|ZP_06442117.1| transcriptional regulator, tetR-... 468 4e-130 gi|289573257|ref|ZP_06453484.1| transcriptional regulator, tetR-... 466 9e-130 gi|340625672|ref|YP_004744124.1| putative transcriptional regula... 462 2e-128 gi|342858846|ref|ZP_08715500.1| hypothetical protein MCOL_08218 ... 342 3e-92 gi|183981012|ref|YP_001849303.1| transcriptional regulatory prot... 326 1e-87 gi|254776941|ref|ZP_05218457.1| transcriptional regulator, TetR ... 325 2e-87 gi|118616529|ref|YP_904861.1| transcriptional regulatory protein... 323 8e-87 gi|118464394|ref|YP_883640.1| TetR family transcriptional regula... 322 2e-86 gi|41410225|ref|NP_963061.1| hypothetical protein MAP4127c [Myco... 321 4e-86 gi|240167665|ref|ZP_04746324.1| transcriptional regulatory prote... 320 1e-85 gi|336460553|gb|EGO39446.1| transcriptional regulator [Mycobacte... 320 1e-85 gi|296168510|ref|ZP_06850326.1| TetR family transcriptional regu... 319 2e-85 gi|254822776|ref|ZP_05227777.1| transcriptional regulator, TetR ... 318 3e-85 gi|333989319|ref|YP_004521933.1| transcriptional regulator [Myco... 290 1e-76 gi|169630954|ref|YP_001704603.1| TetR family transcriptional reg... 230 1e-58 gi|289568591|ref|ZP_06448818.1| transcriptional regulator, tetR-... 192 4e-47 gi|296394502|ref|YP_003659386.1| TetR family transcriptional reg... 170 1e-40 gi|317508211|ref|ZP_07965892.1| tetR family bacterial regulatory... 167 2e-39 gi|302528947|ref|ZP_07281289.1| predicted protein [Streptomyces ... 156 2e-36 gi|315443162|ref|YP_004076041.1| TetR family transcriptional reg... 154 7e-36 gi|300788571|ref|YP_003768862.1| TetR family transcriptional reg... 148 6e-34 gi|145222698|ref|YP_001133376.1| TetR family transcriptional reg... 147 9e-34 gi|297204821|ref|ZP_06922218.1| transcriptional regulator [Strep... 128 8e-28 gi|271965950|ref|YP_003340146.1| TetR family transcriptional reg... 127 1e-27 gi|89899139|ref|YP_521610.1| TetR family transcriptional regulat... 127 2e-27 gi|164665172|gb|ABY66033.1| transcriptional repressor [Actinomad... 122 4e-26 gi|333919851|ref|YP_004493432.1| transcriptional regulator [Amyc... 120 2e-25 gi|256395494|ref|YP_003117058.1| TetR family transcriptional reg... 120 2e-25 gi|256378147|ref|YP_003101807.1| TetR family transcriptional reg... 117 9e-25 gi|298524145|ref|ZP_07011554.1| transcriptional regulatory prote... 117 1e-24 gi|299770015|ref|YP_003732041.1| TetR family transcriptional reg... 115 4e-24 gi|256395492|ref|YP_003117056.1| TetR family transcriptional reg... 115 4e-24 gi|238064046|ref|ZP_04608755.1| transcriptional repressor [Micro... 114 1e-23 gi|325000554|ref|ZP_08121666.1| TetR family transcriptional regu... 109 3e-22 gi|84498583|ref|ZP_00997346.1| possible transcriptional regulato... 108 5e-22 gi|154253096|ref|YP_001413920.1| TetR family transcriptional reg... 107 2e-21 gi|302519389|ref|ZP_07271731.1| transcriptional repressor [Strep... 105 8e-21 gi|238059249|ref|ZP_04603958.1| transcriptional repressor [Micro... 100 2e-19 gi|256380415|ref|YP_003104075.1| TetR family transcriptional reg... 98.2 8e-19 gi|326384549|ref|ZP_08206228.1| TetR family transcriptional regu... 95.9 4e-18 gi|300782819|ref|YP_003763110.1| TetR family transcriptional reg... 95.9 4e-18 gi|269956031|ref|YP_003325820.1| TetR family transcriptional reg... 93.2 2e-17 gi|302524199|ref|ZP_07276541.1| TetR family transcriptional regu... 92.0 6e-17 gi|262204170|ref|YP_003275378.1| TetR family transcriptional reg... 88.2 9e-16 gi|296130995|ref|YP_003638245.1| TetR family transcriptional reg... 87.8 1e-15 gi|134096630|ref|YP_001102291.1| TetR family transcriptional reg... 87.8 1e-15 >gi|15840056|ref|NP_335093.1| transcriptional repressor, putative [Mycobacterium tuberculosis CDC1551] gi|254230983|ref|ZP_04924310.1| hypothetical protein TBCG_00647 [Mycobacterium tuberculosis C] gi|13880203|gb|AAK44907.1| transcriptional repressor, putative [Mycobacterium tuberculosis CDC1551] gi|124600042|gb|EAY59052.1| hypothetical protein TBCG_00647 [Mycobacterium tuberculosis C] Length=257 Score = 469 bits (1207), Expect = 1e-130, Method: Compositional matrix adjust. Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE Sbjct 27 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 86 Query 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT Sbjct 87 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 146 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL Sbjct 147 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 206 Query 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT Sbjct 207 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 257 >gi|253797593|ref|YP_003030594.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis KZN 1435] gi|253319097|gb|ACT23700.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis KZN 1435] Length=255 Score = 469 bits (1206), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE Sbjct 25 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 84 Query 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT Sbjct 85 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 144 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL Sbjct 145 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 204 Query 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT Sbjct 205 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 255 >gi|289744371|ref|ZP_06503749.1| TetR family transcriptional regulator [Mycobacterium tuberculosis 02_1987] gi|289684899|gb|EFD52387.1| TetR family transcriptional regulator [Mycobacterium tuberculosis 02_1987] Length=245 Score = 468 bits (1204), Expect = 3e-130, Method: Compositional matrix adjust. Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE Sbjct 15 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 74 Query 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT Sbjct 75 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 134 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL Sbjct 135 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 194 Query 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT Sbjct 195 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 245 >gi|15607793|ref|NP_215167.1| TetR family transcriptional regulator [Mycobacterium tuberculosis H37Rv] gi|31791837|ref|NP_854330.1| TetR family transcriptional regulator [Mycobacterium bovis AF2122/97] gi|121636574|ref|YP_976797.1| TetR family transcriptional regulator [Mycobacterium bovis BCG str. Pasteur 1173P2] 47 more sequence titles Length=231 Score = 468 bits (1203), Expect = 4e-130, Method: Compositional matrix adjust. Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE Sbjct 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 Query 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT Sbjct 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL Sbjct 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 Query 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT Sbjct 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 >gi|289552907|ref|ZP_06442117.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis KZN 605] gi|308370469|ref|ZP_07421625.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu003] gi|308371726|ref|ZP_07425994.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu004] 16 more sequence titles Length=234 Score = 468 bits (1203), Expect = 4e-130, Method: Compositional matrix adjust. Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE Sbjct 4 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 63 Query 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT Sbjct 64 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 123 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL Sbjct 124 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 183 Query 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT Sbjct 184 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 234 >gi|289573257|ref|ZP_06453484.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis K85] gi|289537688|gb|EFD42266.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis K85] Length=231 Score = 466 bits (1200), Expect = 9e-130, Method: Compositional matrix adjust. Identities = 230/231 (99%), Positives = 230/231 (99%), Gaps = 0/231 (0%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE Sbjct 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 Query 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT Sbjct 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVA AAQFWSQIHGFVMLEL Sbjct 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVANAAQFWSQIHGFVMLEL 180 Query 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT Sbjct 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 >gi|340625672|ref|YP_004744124.1| putative transcriptional regulatory protein [Mycobacterium canettii CIPT 140010059] gi|340003862|emb|CCC42992.1| putative transcriptional regulatory protein (probably TETR-family) [Mycobacterium canettii CIPT 140010059] Length=231 Score = 462 bits (1188), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 229/231 (99%), Positives = 229/231 (99%), Gaps = 0/231 (0%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 MTSQTGVRDELLHAGVRLLDDHG DALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE Sbjct 1 MTSQTGVRDELLHAGVRLLDDHGLDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 Query 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGIN PARDVLT Sbjct 61 GLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINAPARDVLT 120 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL Sbjct 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 Query 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT Sbjct 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 >gi|342858846|ref|ZP_08715500.1| hypothetical protein MCOL_08218 [Mycobacterium colombiense CECT 3035] gi|342133087|gb|EGT86290.1| hypothetical protein MCOL_08218 [Mycobacterium colombiense CECT 3035] Length=235 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 171/223 (77%), Positives = 187/223 (84%), Gaps = 3/223 (1%) Query 1 MTS--QTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIA 58 MTS Q VRDE+LHA V LLD+HGPDALQTRKVA AAGTSTMAVYTHFGGMRGLIAA+A Sbjct 13 MTSEVQRSVRDEMLHAAVGLLDEHGPDALQTRKVAGAAGTSTMAVYTHFGGMRGLIAAVA 72 Query 59 EEGLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDV 118 EEGLRQFD ALTVP TADPVADL G AYRRYAI RPHMYRLMFGSTSAHGIN PA +V Sbjct 73 EEGLRQFDAALTVPPTADPVADLFVTGAAYRRYAIGRPHMYRLMFGSTSAHGINAPAHNV 132 Query 119 LTLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVML 178 LTL VAEIE +PSFAHVVR VHRC+LAGR + A+DD ++VATAAQFW+ IHGFVML Sbjct 133 LTLSVAEIERSYPSFAHVVRGVHRCMLAGRITVGV-ANDDASVVATAAQFWALIHGFVML 191 Query 179 ELAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQ 221 ELAG+YGD +AV PVL AMT NLLVALGDSPER SL++ + Sbjct 192 ELAGYYGDDDSAVAPVLGAMTTNLLVALGDSPERVARSLQSAR 234 >gi|183981012|ref|YP_001849303.1| transcriptional regulatory protein [Mycobacterium marinum M] gi|183174338|gb|ACC39448.1| transcriptional regulatory protein [Mycobacterium marinum M] Length=245 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 164/231 (71%), Positives = 182/231 (79%), Gaps = 14/231 (6%) Query 2 TSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEG 61 T ++GVRDE+LHA V LLD HGPDALQTRKVA AAGTSTMAVYTHFGGM LIA +AEEG Sbjct 9 TQRSGVRDEMLHAAVALLDAHGPDALQTRKVAGAAGTSTMAVYTHFGGMPELIAEVAEEG 68 Query 62 LRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTL 121 LRQFD AL VP + DPVADL+A G AYRRYAIERPHMYRLMFGSTSAHGIN P ++VLTL Sbjct 69 LRQFDTALAVPPSDDPVADLVATGAAYRRYAIERPHMYRLMFGSTSAHGINAPTQNVLTL 128 Query 122 KVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGAD--------------DDTAIVATAAQ 167 +++IE +HPSFAHVVR V R +LAGR GAD D IVATAAQ Sbjct 129 TISQIEQRHPSFAHVVRGVRRSMLAGRITVNGGADRNRASAPDGLATDVPDAEIVATAAQ 188 Query 168 FWSQIHGFVMLELAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLR 218 FW+ IHGFVMLELAGF+GD GAA+EPVLA+MT NLLVALGDSPE A+ S R Sbjct 189 FWALIHGFVMLELAGFFGDEGAAIEPVLASMTTNLLVALGDSPELAKRSQR 239 >gi|254776941|ref|ZP_05218457.1| transcriptional regulator, TetR family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=227 Score = 325 bits (834), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 164/216 (76%), Positives = 179/216 (83%), Gaps = 1/216 (0%) Query 4 QTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLR 63 Q VRD +L A V LL +HGPDALQTRKVA AAGTSTMAVYTHFGGMRGLIA +AEEGLR Sbjct 8 QRNVRDGMLAAAVALLHEHGPDALQTRKVAGAAGTSTMAVYTHFGGMRGLIAEVAEEGLR 67 Query 64 QFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKV 123 QFD ALTVP T DPVADL IG AYRRYAI+ HMYRLMFGSTSAHGIN PA +VLTL V Sbjct 68 QFDAALTVPPTDDPVADLFVIGAAYRRYAIKHRHMYRLMFGSTSAHGINAPAHNVLTLTV 127 Query 124 AEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGF 183 AEIE +PSFAHVVRAVHRC+ AGR TA ADDD A+VATAAQFW+ IHGFVMLELAG+ Sbjct 128 AEIEQNYPSFAHVVRAVHRCMRAGRI-TAGSADDDGAVVATAAQFWASIHGFVMLELAGY 186 Query 184 YGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRA 219 GD G+AV PVL +MT NLLVALGDSP+R S+R+ Sbjct 187 CGDDGSAVLPVLGSMTSNLLVALGDSPKRVSQSMRS 222 >gi|118616529|ref|YP_904861.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99] gi|118568639|gb|ABL03390.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99] Length=245 Score = 323 bits (829), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 164/232 (71%), Positives = 183/232 (79%), Gaps = 16/232 (6%) Query 2 TSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEG 61 T ++GVRDE+LHA V LLD HGPDALQTRKVA A GTSTMAVYTHFGGM LIA +A+EG Sbjct 9 TQRSGVRDEMLHAAVALLDAHGPDALQTRKVAGATGTSTMAVYTHFGGMPELIAEVADEG 68 Query 62 LRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTL 121 LRQFD AL VP + DPVADL+A G AYRRYAIERPHMYRLMFGSTSAHGIN PA++VLTL Sbjct 69 LRQFDTALAVPPSDDPVADLVATGAAYRRYAIERPHMYRLMFGSTSAHGINAPAQNVLTL 128 Query 122 KVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADD---------------DTAIVATAA 166 +++IE +HPSFAHVVR V R +LAGR T G DD D IVATAA Sbjct 129 TISQIEQRHPSFAHVVRGVRRSMLAGRI-TVNGGDDRNRAAAPDGLATDVLDAEIVATAA 187 Query 167 QFWSQIHGFVMLELAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLR 218 QFW+ IHGFVMLELAGF+GD GAA+EPVLA+MT NLLVALGDSPE A+ S R Sbjct 188 QFWALIHGFVMLELAGFFGDEGAAIEPVLASMTTNLLVALGDSPELAKRSQR 239 >gi|118464394|ref|YP_883640.1| TetR family transcriptional regulator [Mycobacterium avium 104] gi|118165681|gb|ABK66578.1| transcriptional regulator, TetR family protein [Mycobacterium avium 104] Length=227 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 163/216 (76%), Positives = 178/216 (83%), Gaps = 1/216 (0%) Query 4 QTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLR 63 Q VRD +L A V LL +HG DALQTRKVA AAGTSTMAVYTHFGGMRGLIA +AEEGLR Sbjct 8 QRNVRDGMLAAAVALLHEHGADALQTRKVAGAAGTSTMAVYTHFGGMRGLIAEVAEEGLR 67 Query 64 QFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKV 123 QFD ALTVP T DPVADL IG AYRRYAI+ HMYRLMFGSTSAHGIN PA +VLTL V Sbjct 68 QFDAALTVPPTDDPVADLFVIGAAYRRYAIKHRHMYRLMFGSTSAHGINAPAHNVLTLTV 127 Query 124 AEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGF 183 AEIE +PSFAHVVRAVHRC+ AGR TA ADDD A+VATAAQFW+ IHGFVMLELAG+ Sbjct 128 AEIEQNYPSFAHVVRAVHRCMRAGRI-TAGSADDDGAVVATAAQFWASIHGFVMLELAGY 186 Query 184 YGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRA 219 GD G+AV PVL +MT NLLVALGDSP+R S+R+ Sbjct 187 CGDDGSAVLPVLGSMTSNLLVALGDSPKRVSQSMRS 222 >gi|41410225|ref|NP_963061.1| hypothetical protein MAP4127c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399059|gb|AAS06677.1| hypothetical protein MAP_4127c [Mycobacterium avium subsp. paratuberculosis K-10] Length=251 Score = 321 bits (823), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 163/216 (76%), Positives = 177/216 (82%), Gaps = 1/216 (0%) Query 4 QTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLR 63 Q VRD +L A V LL +HGPDALQTRKVA AAGTSTMAVYTHFGGMRGLIA +AEEGLR Sbjct 32 QRNVRDGMLAAAVALLHEHGPDALQTRKVAGAAGTSTMAVYTHFGGMRGLIAEVAEEGLR 91 Query 64 QFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKV 123 QFD ALTVP T DPVADL IG AYRRYAI HMYRLMFGSTSAHGIN PA +VLTL V Sbjct 92 QFDAALTVPPTDDPVADLFVIGAAYRRYAIRHRHMYRLMFGSTSAHGINAPAHNVLTLTV 151 Query 124 AEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGF 183 AEIE +PSFAHVVRAVHRC+ AGR TA ADDD A+VATAAQFW+ IHGFVMLELAG+ Sbjct 152 AEIEQNYPSFAHVVRAVHRCMRAGRI-TAGPADDDGAVVATAAQFWASIHGFVMLELAGY 210 Query 184 YGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRA 219 D G+AV PVL +MT NLLVALGDSP+R S+R+ Sbjct 211 CSDDGSAVLPVLGSMTSNLLVALGDSPKRVSQSMRS 246 >gi|240167665|ref|ZP_04746324.1| transcriptional regulatory protein [Mycobacterium kansasii ATCC 12478] Length=230 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 159/217 (74%), Positives = 176/217 (82%), Gaps = 3/217 (1%) Query 6 GVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQF 65 GVR+E++HA V LLD+HGPDALQTRKV+ AAGTSTM+VYTHFGGMR LIAA+AEEGLRQF Sbjct 11 GVREEMVHAAVALLDEHGPDALQTRKVSGAAGTSTMSVYTHFGGMRELIAAVAEEGLRQF 70 Query 66 DVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAE 125 D AL V T DPVADLL +G AYRRYAIERPHMYRLMFGSTSAHGI PA DVLTL V E Sbjct 71 DAALAVAPTTDPVADLLVVGAAYRRYAIERPHMYRLMFGSTSAHGIKAPALDVLTLTVVE 130 Query 126 IEHQHPSFAHVVRAVHRCLLAGRF---ATALGADDDTAIVATAAQFWSQIHGFVMLELAG 182 IE HPSFAHVVRAVHR +LAGR +T G D +++ AAQFW+ IHGFVMLELAG Sbjct 131 IEQHHPSFAHVVRAVHRSMLAGRITVGSTGDGDAPDQVVISVAAQFWALIHGFVMLELAG 190 Query 183 FYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRA 219 F+G A V PVLAAMT NLLVALGDSPER + S R+ Sbjct 191 FFGGESATVPPVLAAMTTNLLVALGDSPERVRQSQRS 227 >gi|336460553|gb|EGO39446.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=227 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 162/216 (75%), Positives = 176/216 (82%), Gaps = 1/216 (0%) Query 4 QTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLR 63 Q VRD +L A V LL +HGPDALQTRKVA AAGTSTMAVYTHFGGMRGLIA +AEEGLR Sbjct 8 QRNVRDGMLAAAVALLHEHGPDALQTRKVAGAAGTSTMAVYTHFGGMRGLIAEVAEEGLR 67 Query 64 QFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKV 123 QFD AL VP T DPVADL IG AYRRYAI HMYRLMFGSTSAHGIN PA +VLTL V Sbjct 68 QFDAALAVPPTDDPVADLFVIGAAYRRYAIRHRHMYRLMFGSTSAHGINAPAHNVLTLTV 127 Query 124 AEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGF 183 AEIE +PSFAHVVRAVHRC+ AGR TA ADDD A+VATAAQFW+ IHGFVMLELAG+ Sbjct 128 AEIEQNYPSFAHVVRAVHRCMRAGRI-TAGPADDDGAVVATAAQFWASIHGFVMLELAGY 186 Query 184 YGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRA 219 D G+AV PVL +MT NLLVALGDSP+R S+R+ Sbjct 187 CSDDGSAVLPVLGSMTSNLLVALGDSPKRVSQSMRS 222 >gi|296168510|ref|ZP_06850326.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896688|gb|EFG76325.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=229 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/217 (75%), Positives = 173/217 (80%), Gaps = 2/217 (0%) Query 3 SQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGL 62 S VRDE+LHA V LL+ GPDALQTRKVA AAGTSTMAVYTHFGGMRGLIA +AEEGL Sbjct 12 SARNVRDEMLHAAVDLLNSQGPDALQTRKVAGAAGTSTMAVYTHFGGMRGLIAEVAEEGL 71 Query 63 RQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLK 122 RQF ALTVP T DPVAD A+G AYRRYAIERPHMYRLMFGSTSAHGIN PA +VLTL Sbjct 72 RQFGAALTVPHTDDPVADFFALGAAYRRYAIERPHMYRLMFGSTSAHGINAPAGNVLTLT 131 Query 123 VAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAG 182 VAEIE PSFAHVVRAV R + AGR +G D AIV TAAQFW+ +HGFVMLELAG Sbjct 132 VAEIEQHIPSFAHVVRAVQRSMRAGRI--TVGPATDEAIVTTAAQFWALVHGFVMLELAG 189 Query 183 FYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRA 219 FYG GAAV PVLA+MT N LVALGDSPE + S RA Sbjct 190 FYGQDGAAVAPVLASMTSNFLVALGDSPELVRNSQRA 226 >gi|254822776|ref|ZP_05227777.1| transcriptional regulator, TetR family protein [Mycobacterium intracellulare ATCC 13950] Length=217 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 159/211 (76%), Positives = 174/211 (83%), Gaps = 3/211 (1%) Query 11 LLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFDVALT 70 +L A V LLD+HGPDALQTRKVA AAGTSTMAVYTHFGGMRGLIA +AEEGLRQFD ALT Sbjct 1 MLRAAVGLLDEHGPDALQTRKVAGAAGTSTMAVYTHFGGMRGLIAEVAEEGLRQFDAALT 60 Query 71 VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEIEHQH 130 VP TADPVADL IG AYRRYAI+RPH+YRLMFGSTSAHGIN PA +VLTL VAEIE + Sbjct 61 VPHTADPVADLFMIGAAYRRYAIKRPHVYRLMFGSTSAHGINAPAHNVLTLTVAEIERDY 120 Query 131 PSFAHVVRAVHRCLLAGRFATALGAD---DDTAIVATAAQFWSQIHGFVMLELAGFYGDR 187 PSFAHVVR VHRC +AGR A DD ++VATAAQFW+ IHGFVMLELAG+YGD Sbjct 121 PSFAHVVRGVHRCAVAGRIKPAGAVKDGVDDASVVATAAQFWALIHGFVMLELAGYYGDD 180 Query 188 GAAVEPVLAAMTVNLLVALGDSPERAQCSLR 218 +AV PVL +MT NLLVALGDSPER SL+ Sbjct 181 SSAVVPVLGSMTSNLLVALGDSPERVAQSLQ 211 >gi|333989319|ref|YP_004521933.1| transcriptional regulator [Mycobacterium sp. JDM601] gi|333485287|gb|AEF34679.1| transcriptional regulatory protein [Mycobacterium sp. JDM601] Length=233 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 152/230 (67%), Positives = 180/230 (79%), Gaps = 13/230 (5%) Query 1 MTSQTG--VRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIA 58 MTSQ VRD+LL+A + LLD+HGPDALQTRK+AAAAGTSTMAVYTHFGGM LIAAIA Sbjct 1 MTSQPDHTVRDDLLNAALGLLDEHGPDALQTRKIAAAAGTSTMAVYTHFGGMAQLIAAIA 60 Query 59 EEGLRQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDV 118 EEGLR+FD AL++P+T DPVADLLA G AYR +AI RPH+YRLMFGSTSAHGIN P +++ Sbjct 61 EEGLRRFDAALSIPETDDPVADLLATGVAYRDFAIGRPHLYRLMFGSTSAHGINAPTQNM 120 Query 119 LTLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADD------DTAIVATAAQFWSQI 172 LTL +AEI+ + PSFAH+VR VHR + AGR A G++D D +VATAAQFW+ + Sbjct 121 LTLGLAEIDVRFPSFAHLVRGVHRSMQAGRIAA--GSNDTDSDGSDAQVVATAAQFWTVM 178 Query 173 HGFVMLELAGFYGDRGAAVE---PVLAAMTVNLLVALGDSPERAQCSLRA 219 HGFVMLELAGF+G GA+V PVL M LL+ALGD+PER SL A Sbjct 179 HGFVMLELAGFFGGTGASVAAAGPVLKPMATGLLIALGDTPERVAQSLAA 228 >gi|169630954|ref|YP_001704603.1| TetR family transcriptional regulator [Mycobacterium abscessus ATCC 19977] gi|169242921|emb|CAM63949.1| Putative transcriptional regulator, TetR family [Mycobacterium abscessus] Length=250 Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 121/206 (59%), Positives = 155/206 (76%), Gaps = 5/206 (2%) Query 8 RDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQF-D 66 R +L+ A VRLL++ GPDALQTRK+AAAAGTSTMAVYT+FGGMR LIA +AE GLRQF + Sbjct 33 RVDLVSAAVRLLNEQGPDALQTRKIAAAAGTSTMAVYTYFGGMRELIAEVAEAGLRQFAE 92 Query 67 VALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEI 126 V Q+ D +AD + G AYR++AI+ PHMYRLMFG TSAHG+N P R++ + + Sbjct 93 AQAAVEQSDDVIADFMLTGMAYRQFAIDYPHMYRLMFGVTSAHGVNAPRRNM--FDTSHV 150 Query 127 EHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYGD 186 +HPS A++ R V R + AGR + +D + ATAA+FW+ +HGFVMLELAGF+G+ Sbjct 151 TPEHPSAAYLFRCVQRAMAAGRIDGS--PEDAAKVAATAAKFWTVMHGFVMLELAGFWGE 208 Query 187 RGAAVEPVLAAMTVNLLVALGDSPER 212 GAAV PVLA+MT +LLVALGD+PER Sbjct 209 DGAAVGPVLASMTTDLLVALGDTPER 234 >gi|289568591|ref|ZP_06448818.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis T17] gi|289542345|gb|EFD45993.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis T17] Length=96 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 94/96 (98%), Positives = 95/96 (99%), Gaps = 0/96 (0%) Query 136 VVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYGDRGAAVEPVL 195 +VRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYGDRGA VEPVL Sbjct 1 MVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYGDRGADVEPVL 60 Query 196 AAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 231 AAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT Sbjct 61 AAMTVNLLVALGDSPERAQCSLRAEQTQKNTLGRAT 96 >gi|296394502|ref|YP_003659386.1| TetR family transcriptional regulator [Segniliparus rotundus DSM 44985] gi|296181649|gb|ADG98555.1| transcriptional regulator, TetR family [Segniliparus rotundus DSM 44985] Length=243 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 96/220 (44%), Positives = 137/220 (63%), Gaps = 14/220 (6%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 M+S +R EL+ A + LL DHGPDALQ R+VAAA TSTM+VYT+FGGM+ L+AA+++E Sbjct 1 MSSARDLRKELVEASLGLLADHGPDALQARRVAAACDTSTMSVYTYFGGMKQLLAAVSDE 60 Query 61 GLRQFDVALTVPQTA-DPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVL 119 G+R+F L + + DPVADL YR +A+E PH+YRLM G SAHG++VP + Sbjct 61 GVRRFAKTLQIVEPGEDPVADLAVYTFLYRHFALENPHLYRLMLGEASAHGVSVPVQ--F 118 Query 120 TLKVAEIEHQHPSFA--HVV-RAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFV 176 T+ E P HV+ A+ R + +GR + D+ ++ QFWS +HG+V Sbjct 119 TVPQFNKEGLRPELGIVHVLADAMQRSVDSGRI------NGDS--LSMMFQFWSAMHGYV 170 Query 177 MLELAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCS 216 +LELAG+ G A + VL + ++L GDSPE+ + S Sbjct 171 LLELAGYLGHEDAGLRSVLLPLGASVLQGWGDSPEKVKKS 210 >gi|317508211|ref|ZP_07965892.1| tetR family bacterial regulatory protein [Segniliparus rugosus ATCC BAA-974] gi|316253501|gb|EFV12890.1| tetR family bacterial regulatory protein [Segniliparus rugosus ATCC BAA-974] Length=230 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 94/218 (44%), Positives = 134/218 (62%), Gaps = 9/218 (4%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 M+S +R EL+ A + LL DHGPDALQ R+VAAA TSTM+VYT+FGGM+ L+AA+A+E Sbjct 1 MSSARDLRRELIEASLALLADHGPDALQARRVAAACDTSTMSVYTYFGGMKQLLAAVADE 60 Query 61 GLRQFDVALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPAR-DV 118 GL + + L V + DPVADL YRR+A+E PH+YRLM G S +G++ P V Sbjct 61 GLHRLAMTLQLVDPSDDPVADLAVYTFLYRRFALENPHLYRLMLGEASVNGVSAPVTFTV 120 Query 119 LTLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVML 178 ++ E+ + + AV R + AGR G D + + QFWS +HG+V+L Sbjct 121 PSVSKGEVRAELGVILVIASAVQRAIDAGRIH---GEDPLSMLF----QFWSAMHGYVLL 173 Query 179 ELAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCS 216 ELAG+ G +E VL + ++L+ GDSP++ + S Sbjct 174 ELAGYLGHDNDGLESVLLPLGASVLLGWGDSPDQIRKS 211 >gi|302528947|ref|ZP_07281289.1| predicted protein [Streptomyces sp. AA4] gi|302437842|gb|EFL09658.1| predicted protein [Streptomyces sp. AA4] Length=216 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 101/213 (48%), Positives = 127/213 (60%), Gaps = 17/213 (7%) Query 8 RDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFDV 67 R +L+ A +RLL D GP+ALQ RK+AA G STMAVYTHFGGM L+ A+A EG R+ Sbjct 11 RTQLVEAAIRLLADGGPEALQARKLAAEIGASTMAVYTHFGGMSALMEAVAREGFRRLIA 70 Query 68 AL-TVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEI 126 + TV T DPVADL + AYRR A+E P ++ LMF AHG P D+ LK + Sbjct 71 NMATVEPTDDPVADLYQLALAYRRTAVEHPELFTLMFREAGAHG--QPVGDL--LKDHQD 126 Query 127 EHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFY-- 184 SF +V AV R + AGR L D +A A+Q WS +HG+V LEL G + Sbjct 127 SEAASSFRGMVAAVGRTIEAGR----LQGDP----LAVASQVWSAVHGYVTLELLGHFGR 178 Query 185 GDRGAAVEPVLAAMTVNLLVALGDSPERAQCSL 217 GDRG V VLA + V L+V LGD P A+ S+ Sbjct 179 GDRG--VTEVLAPLCVTLVVGLGDRPAAARASV 209 >gi|315443162|ref|YP_004076041.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1] gi|315261465|gb|ADT98206.1| transcriptional regulator, tetR family [Mycobacterium sp. Spyr1] Length=217 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 95/221 (43%), Positives = 131/221 (60%), Gaps = 9/221 (4%) Query 7 VRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFD 66 VRD+++ AGVRLL+ G AL R VA AGTSTMA+YTHFGGM GL+ A+A + +F Sbjct 4 VRDKMVAAGVRLLERDGLSALSARSVATEAGTSTMALYTHFGGMTGLLDAVAVDVFHRFT 63 Query 67 VALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAE 125 ALT VP++ DPVAD L +G AY R+A+ P Y+L+FG+ S I D+ A Sbjct 64 EALTGVPRSDDPVADFLMMGLAYHRFALANPARYQLIFGAASPESIARFRTDITETGSAT 123 Query 126 IEHQH-PSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFY 184 + SF + AVHR + AGR + DD+ A+ A + WS HG VMLE+AGF+ Sbjct 124 NRAEWAASFGALHGAVHRMMAAGR----IRQDDELAV---AGRLWSINHGAVMLEMAGFF 176 Query 185 GDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKN 225 G G + +L + ++ LV +GD + A S+ A TQ + Sbjct 177 GHEGHGLAQILGPLIIDTLVGMGDDRDAAVRSMHAVLTQNS 217 >gi|300788571|ref|YP_003768862.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|299798085|gb|ADJ48460.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|340530178|gb|AEK45383.1| TetR family transcriptional regulator [Amycolatopsis mediterranei S699] Length=235 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/210 (41%), Positives = 123/210 (59%), Gaps = 9/210 (4%) Query 5 TGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEG-LR 63 T V+ L+ A +RLLD++GP+ALQ RK+AA G STMAVYTHFGGM L+ +A G LR Sbjct 8 TDVKARLVEAAIRLLDENGPEALQARKLAAEVGASTMAVYTHFGGMAALVDEVARAGFLR 67 Query 64 QFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKV 123 + V +T DPVAD+ ++ YR+ E+P ++ + FG ++ G D+ T + Sbjct 68 LSEWLAEVGETDDPVADIFSLARTYRQAVAEQPQLFAVTFGQSAPGGKRATLSDLTTAEG 127 Query 124 AE-IEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAG 182 E E +FAH+VRA R + AGRF AD+ A AAQ WS +HGFV LE +G Sbjct 128 REAAEEGLEAFAHIVRATERAIAAGRFRP---ADEYQA----AAQLWSALHGFVTLEASG 180 Query 183 FYGDRGAAVEPVLAAMTVNLLVALGDSPER 212 +G ++ +L + + + V LGD+ E Sbjct 181 HFGPGEQGIDHILIPLGITMAVGLGDTVEE 210 >gi|145222698|ref|YP_001133376.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK] gi|145215184|gb|ABP44588.1| transcriptional regulator, TetR family [Mycobacterium gilvum PYR-GCK] Length=218 Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 92/214 (43%), Positives = 125/214 (59%), Gaps = 9/214 (4%) Query 7 VRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFD 66 VRD L+ AGVRLL+ G AL R VA AGTSTMA+YTHFGGM GL+ A+A + +F Sbjct 5 VRDNLVAAGVRLLEGGGVSALSARSVATEAGTSTMALYTHFGGMTGLLDAVAVDVFARFT 64 Query 67 VALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAE 125 ALT V T DPVAD L +G AY R+A+ P Y+L+FG+ + I+ D+ A Sbjct 65 EALTEVAPTDDPVADFLMMGLAYHRFALANPQRYQLIFGAAAPASISRFRADITETGSAT 124 Query 126 IEHQH-PSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFY 184 + SF + AVHR + AGR DD+ A+ A + WS HG VMLE+AGF+ Sbjct 125 NRAEWAASFGALHGAVHRMMAAGRIRR----DDELAV---AGRLWSINHGAVMLEMAGFF 177 Query 185 GDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLR 218 G G + +L + ++ LV +GD + A S++ Sbjct 178 GHEGHGLVHILGPLIIDTLVGMGDDRDAATLSMQ 211 >gi|297204821|ref|ZP_06922218.1| transcriptional regulator [Streptomyces sviceus ATCC 29083] gi|197712536|gb|EDY56570.1| transcriptional regulator [Streptomyces sviceus ATCC 29083] Length=227 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 83/218 (39%), Positives = 116/218 (54%), Gaps = 17/218 (7%) Query 7 VRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFD 66 V + L+ A V LL + GP A++ R VA+A+G STM VY+HFGG+ L++A+A+ G ++ Sbjct 10 VPERLVRATVDLLAEQGPSAIKARSVASASGLSTMVVYSHFGGIPELMSAVADHGFKELG 69 Query 67 VALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAE 125 A VP T DP+ADL A+ RR A + PH+Y LMFG S P+ T Sbjct 70 RAFALVPVTEDPIADLFAMALTCRRLASDNPHLYDLMFG-LSTRATYRPS----TGANPR 124 Query 126 IEHQHPSF----AHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELA 181 + P+F H+ A R + +GR + AAQ WS +HG++ LELA Sbjct 125 LSGHSPAFREAHVHITAACERLVHSGRV-------EQREPEVMAAQLWSMVHGYITLELA 177 Query 182 GFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRA 219 + + AV VL M VN V LGD RA+ S +A Sbjct 178 EHFVEFEDAVAQVLLPMGVNFAVGLGDQRTRAEVSHQA 215 >gi|271965950|ref|YP_003340146.1| TetR family transcriptional regulator [Streptosporangium roseum DSM 43021] gi|270509125|gb|ACZ87403.1| putative transcriptional regulator, TetR family [Streptosporangium roseum DSM 43021] Length=243 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/221 (39%), Positives = 113/221 (52%), Gaps = 27/221 (12%) Query 3 SQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGL 62 S R L+ RLL D GP AL R++A AG+STMAVYT+FGGM GL+ + EG Sbjct 6 SNPQTRPALVDIAARLLADEGPQALSARRIATEAGSSTMAVYTNFGGMSGLVREMVYEGF 65 Query 63 RQFDVALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTL 121 + + V +TADPVAD+ +G AYR A+ PH+Y +MFG S G ++ A D Sbjct 66 ARLQSYFSHVSRTADPVADIALLGRAYRHNALTNPHLYAVMFGGASLAGFSLTAEDR--- 122 Query 122 KVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELA 181 ++ + + VV RC+ A RF D D +VA Q W+ IHG V LEL Sbjct 123 -----QYGRYTLSTVVECATRCITAKRF-----RDGDAELVAH--QLWTAIHGLVTLELG 170 Query 182 GFYGDRGAAVEP-----VLAAMTVNLLVALGDSPERAQCSL 217 + +EP V A L+V GD+ E A S+ Sbjct 171 EYL------IEPFDADRVFEAQLTGLMVGAGDTLEAATRSV 205 >gi|89899139|ref|YP_521610.1| TetR family transcriptional regulator [Rhodoferax ferrireducens T118] gi|89343876|gb|ABD68079.1| transcriptional regulator, TetR family [Rhodoferax ferrireducens T118] Length=237 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/210 (40%), Positives = 111/210 (53%), Gaps = 16/210 (7%) Query 8 RDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLR-QFD 66 R LL A +RLL HGP ++ R V++ AG STM VYTHFGG+ L+ A+AEEG R Q D Sbjct 7 RSRLLKAAIRLLATHGPTEIKARSVSSEAGLSTMGVYTHFGGVSELLQAVAEEGFRQQAD 66 Query 67 VALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPAR-DVLTLKVAE 125 + V T D + DL AI A R +A+ H+Y LMFG S G P R + T Sbjct 67 IFRQVANTQDAMTDLCAIALACRDFAMRNAHLYDLMFG-LSIQGRYGPVRGESTTAPKVG 125 Query 126 IEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYG 185 + S++H+ R L+ G + D AAQ WS +HGF++LEL G + Sbjct 126 ADAFMASYSHLRGGCER-LIKGNCVRQMEPD------LMAAQLWSTLHGFILLELGGHF- 177 Query 186 DRGAAVEP---VLAAMTVNLLVALGDSPER 212 A + P +L M +NL+V LG ER Sbjct 178 --AATLNPPIEILVPMCINLVVGLGADRER 205 >gi|164665172|gb|ABY66033.1| transcriptional repressor [Actinomadura madurae] Length=226 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 81/216 (38%), Positives = 107/216 (50%), Gaps = 27/216 (12%) Query 8 RDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFDV 67 R L+ RLL + GP AL TR++AA AGTSTM VYTHFG M L+ + EG + Sbjct 11 RTVLIDVAARLLAEKGPQALTTRRIAAEAGTSTMGVYTHFGSMGELVREMVREGFARLHT 70 Query 68 ALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEI 126 T V + DPVADL +G AYR A+ PH+Y +MFG S G ++ D Sbjct 71 RFTQVRDSDDPVADLALLGRAYRHNALANPHLYAVMFGGASLGGFSLTDEDR-------- 122 Query 127 EHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYGD 186 +H + +V RC+ AGRF D +V A + WS IHG V LEL G+ Sbjct 123 QHGRYTLVYVTACAGRCVEAGRFRPG-----DPELV--AHRMWSAIHGLVTLELGGYL-- 173 Query 187 RGAAVEP-----VLAAMTVNLLVALGDSPERAQCSL 217 VEP + V L++ GD+ A S+ Sbjct 174 ----VEPYGADTCFESQLVTLMIGAGDTENAATASV 205 >gi|333919851|ref|YP_004493432.1| transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] gi|333482072|gb|AEF40632.1| Transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] Length=228 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/218 (36%), Positives = 116/218 (54%), Gaps = 9/218 (4%) Query 1 MTSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEE 60 +TSQ + + L+ A + LL + GP ++ R VA A STM+VY H GG+ L+ A+ ++ Sbjct 12 LTSQQ-ITERLVDAAMTLLAEEGPSEIKARSVAEVAQVSTMSVYYHLGGLPELLQAVIDK 70 Query 61 GLRQFDVAL-TVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVL 119 G + A V +T DP ADL I A R+ A PH+Y LMFG ++ G R Sbjct 71 GFEDLNRAFHAVTRTEDPAADLFGIAVACRQLAQSNPHLYDLMFGLSTRGGYR-QLRRSR 129 Query 120 TLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLE 179 T E +++++V R + +GR + +D D +AT Q WS +HGFV LE Sbjct 130 TTHSGRSEAFKAAYSYLVGECARFVDSGR----VRSDQDPEAIAT--QLWSCVHGFVTLE 183 Query 180 LAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSL 217 L + V VL M VNLLV +GD+ ++A+ S+ Sbjct 184 LGDHFAQFQDPVRDVLQPMMVNLLVGMGDAADQARTSV 221 >gi|256395494|ref|YP_003117058.1| TetR family transcriptional regulator [Catenulispora acidiphila DSM 44928] gi|256361720|gb|ACU75217.1| transcriptional regulator, TetR family [Catenulispora acidiphila DSM 44928] Length=222 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/216 (36%), Positives = 114/216 (53%), Gaps = 17/216 (7%) Query 3 SQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGL 62 +Q +R L+ A +L + GPD L TR++A G ST AVYT+FGGM L+ A+ EG Sbjct 9 AQPDIRRALIEAAATILAESGPDGLSTRQLAREVGVSTTAVYTYFGGMDDLVRAMVHEGF 68 Query 63 RQFDVALTVP-QTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTL 121 + + ALT + DPVAD++ +G YR A+ H+Y +MFG ++ G ++ D Sbjct 69 ARLNRALTATGDSQDPVADVVRLGRVYRENALRHRHLYAVMFGGSALAGFSLTDEDR--- 125 Query 122 KVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELA 181 H + +V A+ RC++AGRF + D +VA + W IHG V LE+ Sbjct 126 -----AHGLYTLDLLVAAIERCVVAGRFRSG-----DATLVAH--ELWMSIHGIVTLEIG 173 Query 182 GFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSL 217 G+ + A + A LLV GD ERA+ S+ Sbjct 174 GYLFEPYDA-DACFDAQVCTLLVGSGDGLERARQSI 208 >gi|256378147|ref|YP_003101807.1| TetR family transcriptional regulator [Actinosynnema mirum DSM 43827] gi|255922450|gb|ACU37961.1| transcriptional regulator, TetR family [Actinosynnema mirum DSM 43827] Length=232 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 76/180 (43%), Positives = 98/180 (55%), Gaps = 22/180 (12%) Query 8 RDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGL----R 63 R L+ RLL +HG AL TR++AA AGTSTMAVYT+FGGM GL+ A+A EG R Sbjct 11 RTALVDIAGRLLAEHGAQALSTRRIAAEAGTSTMAVYTYFGGMSGLVRAMAHEGFARLER 70 Query 64 QFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKV 123 QF V T DPVAD+L +G AYR A H+Y +MFG S G ++ D Sbjct 71 QFG---RVRHTDDPVADVLVLGHAYRHNAKANSHLYAVMFGGQSLAGFSLTEEDR----- 122 Query 124 AEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGF 183 ++ + V V RC+ AGRF + D A++A + W HG V LEL G+ Sbjct 123 ---QYGRYTLLTAVERVTRCIAAGRF-----REGDPALIAH--EMWIATHGLVNLELGGY 172 >gi|298524145|ref|ZP_07011554.1| transcriptional regulatory protein [Mycobacterium tuberculosis 94_M4241A] gi|298493939|gb|EFI29233.1| transcriptional regulatory protein [Mycobacterium tuberculosis 94_M4241A] Length=70 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/64 (91%), Positives = 59/64 (93%), Gaps = 0/64 (0%) Query 168 FWSQIHGFVMLELAGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLRAEQTQKNTL 227 F + GFVMLELAGFYGDRGAAVEPVLAAMTV LLVALGDSPERAQCSLRAEQTQKNTL Sbjct 7 FGHRSTGFVMLELAGFYGDRGAAVEPVLAAMTVTLLVALGDSPERAQCSLRAEQTQKNTL 66 Query 228 GRAT 231 GRAT Sbjct 67 GRAT 70 >gi|299770015|ref|YP_003732041.1| TetR family transcriptional regulator [Acinetobacter sp. DR1] gi|298700103|gb|ADI90668.1| TetR family transcriptional regulator [Acinetobacter sp. DR1] Length=232 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 68/201 (34%), Positives = 104/201 (52%), Gaps = 9/201 (4%) Query 8 RDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGL-RQFD 66 R LL A +R++++ GP ++ R VA AG STM VYTHFGG+ L+ AIA+EG +Q Sbjct 17 RTRLLEAAMRIIENQGPSQIKARTVALEAGQSTMGVYTHFGGVPELLQAIADEGFTQQAR 76 Query 67 VALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEI 126 + ++ T +P+ ++ + R +A+ PH+Y LMFG S G P R Sbjct 77 LFKSIENTDEPMTNMCLMALECRNFAMANPHLYDLMFG-LSIQGRYTPLRRSEASANEST 135 Query 127 EHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYGD 186 E S+++ +R L+ ++ + D AAQ WS +HGF+MLEL + Sbjct 136 EAFKNSYSY-LRQECVNLIEAKYIRDIDPD------VMAAQLWSALHGFIMLELGQHFTS 188 Query 187 RGAAVEPVLAAMTVNLLVALG 207 +L M +NL+V LG Sbjct 189 CPNPTTEILIPMCINLIVGLG 209 >gi|256395492|ref|YP_003117056.1| TetR family transcriptional regulator [Catenulispora acidiphila DSM 44928] gi|256361718|gb|ACU75215.1| transcriptional regulator, TetR family [Catenulispora acidiphila DSM 44928] Length=229 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/220 (36%), Positives = 116/220 (53%), Gaps = 23/220 (10%) Query 3 SQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGL 62 +Q+ +R+ LL A R+L G L TR++A G+STMAVYTHFG M L+ A+ EG Sbjct 6 AQSDLREALLEAAARILAQDGSVGLSTRRLAKEVGSSTMAVYTHFGSMDDLVRAVVHEGF 65 Query 63 RQFDVAL-TVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTL 121 + + ++ + +ADPVAD++A G YR A + +Y++M GS + G ++ D L Sbjct 66 ARLNTSMIAIGDSADPVADVVAHGRVYRWNAHQNADLYQVMLGSLNIAGFSLTDADRL-- 123 Query 122 KVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELA 181 H +V +V RC+ AGRF + D +VA FW+ +HG V LEL Sbjct 124 ------HGRYVLDILVASVRRCMAAGRF-----QEGDPELVAHL--FWTALHGIVTLELG 170 Query 182 GFY---GDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLR 218 G+ D A E A +++V +GD E A S+R Sbjct 171 GYLFAPYDADACFE----AQVHSMIVGIGDDSEDAWASMR 206 >gi|238064046|ref|ZP_04608755.1| transcriptional repressor [Micromonospora sp. ATCC 39149] gi|237885857|gb|EEP74685.1| transcriptional repressor [Micromonospora sp. ATCC 39149] Length=216 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/217 (36%), Positives = 110/217 (51%), Gaps = 17/217 (7%) Query 3 SQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGL 62 + + VR LL RLL + GP AL R+VA AGTSTM VYTHFG M L A+ EG Sbjct 6 TDSTVRVRLLEGAARLLAEEGPSALTLRRVATEAGTSTMGVYTHFGSMADLADAVVTEGF 65 Query 63 RQFDVALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTL 121 + L VP+T + + DL + AY A + PH+Y +MFG T+ G+ P Sbjct 66 ARLAARLAEVPRTDNAITDLAGLARAYLVNARQNPHLYAVMFG-TAPLGMYRPQ------ 118 Query 122 KVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELA 181 E + +F +V + R A D AI A+Q W+ +HG+VM ++ Sbjct 119 TADERKRGRHAFEEIVETCGHAVKQRRLRPA----DPLAI---ASQLWTAMHGYVMADVG 171 Query 182 GFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSLR 218 G++G+ G E VL M V +L LG P+ A S++ Sbjct 172 GYFGEDG--TEHVLVPMLVTMLSGLGADPDTALASIK 206 >gi|325000554|ref|ZP_08121666.1| TetR family transcriptional regulator [Pseudonocardia sp. P1] Length=221 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 78/216 (37%), Positives = 105/216 (49%), Gaps = 17/216 (7%) Query 5 TGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQ 64 T R++L+ A R L++ GP AL R + G ST A+Y HFG M L+ A+ + G + Sbjct 8 TRKREQLIDAAARALEEKGPQALNARGLGKDIGASTSAIYHHFGDMPTLLRAVVDLGFDR 67 Query 65 FDVALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKV 123 D L VP T D + D+ + AYR A PH+Y LMFG ++ P T Sbjct 68 LDQTLAAVPSTEDAITDIAGLALAYRAAARRGPHLYDLMFG------LSAPGGQRPTPSP 121 Query 124 AEIEHQHPS---FAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 Q P+ F H+V AV R GR AAQ WS +HG+V LEL Sbjct 122 GISATQGPARQAFLHLVHAVERGSGQGRLRG-------VPAEPVAAQLWSMLHGYVGLEL 174 Query 181 AGFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCS 216 +G + D + VL M NL++ LGD PE A+ S Sbjct 175 SGLFDDLSDPLGEVLLPMGTNLIIGLGDHPEDARRS 210 >gi|84498583|ref|ZP_00997346.1| possible transcriptional regulatory protein (probably tetr-family protein) [Janibacter sp. HTCC2649] gi|84381116|gb|EAP97001.1| possible transcriptional regulatory protein (probably tetr-family protein) [Janibacter sp. HTCC2649] Length=193 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 77/212 (37%), Positives = 99/212 (47%), Gaps = 38/212 (17%) Query 9 DELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFDVA 68 DE++ A LL GP AL R+VA GTSTM VYTHFG M L+ A+ EG Q D+ Sbjct 9 DEVVRAAATLLATQGPSALSARRVATELGTSTMTVYTHFGSMTDLVRAVVAEGFHQLDLH 68 Query 69 LT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEIE 127 L +P T DP ADL+A+ AYR +E P +Y +MFG GI A D L + Sbjct 69 LEDLPITNDPRADLVAVARAYRANGLENPQLYAVMFG-----GI---ADDTSPLTPEDRR 120 Query 128 HQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYGDR 187 S ++ A R + AG +++ A + W+ HGFV LELAG G Sbjct 121 VGENSLTKLLEATKRAVAAGLLP------EESHQWEHARRLWAVGHGFVSLELAGLLG-- 172 Query 188 GAAVEPVLAAMTVNLLVALGDSPERAQCSLRA 219 SPERA+ S A Sbjct 173 ---------------------SPERAEASFLA 183 >gi|154253096|ref|YP_001413920.1| TetR family transcriptional regulator [Parvibaculum lavamentivorans DS-1] gi|154157046|gb|ABS64263.1| transcriptional regulator, TetR family [Parvibaculum lavamentivorans DS-1] Length=226 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/193 (38%), Positives = 99/193 (52%), Gaps = 28/193 (14%) Query 4 QTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGL- 62 +T R+ LL A +L GPDA+ RK+A GTSTMAVYT FGG GLI A+ EE Sbjct 13 RTAQREALLDAASEMLMLGGPDAISLRKLATKVGTSTMAVYTAFGGKEGLITALFEEAFD 72 Query 63 RQFDVALTVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGST-----------SAHGI 111 R L VP+ +P+ L + AYR +A++ P Y LM +T A G Sbjct 73 RLAATELAVPRNPEPLLWLADLARAYRSFALKNPSYYALMISATLPVPASLRHSNQAEG- 131 Query 112 NVPARDVLTLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQ 171 PAR + +HPS+ ++ AV C+ G +L +D + I+A A W+ Sbjct 132 EPPARSI---------TRHPSYQTLLDAVEACVADG----SLPSDIEAEILADA--LWAA 176 Query 172 IHGFVMLELAGFY 184 +HG LELAGF+ Sbjct 177 VHGLSSLELAGFH 189 >gi|302519389|ref|ZP_07271731.1| transcriptional repressor [Streptomyces sp. SPB78] gi|318056450|ref|ZP_07975173.1| transcriptional regulator, TetR family protein [Streptomyces sp. SA3_actG] gi|318079724|ref|ZP_07987056.1| transcriptional regulator, TetR family protein [Streptomyces sp. SA3_actF] gi|333026782|ref|ZP_08454846.1| putative transcriptional regulator, TetR family protein [Streptomyces sp. Tu6071] gi|302428284|gb|EFL00100.1| transcriptional repressor [Streptomyces sp. SPB78] gi|332746634|gb|EGJ77075.1| putative transcriptional regulator, TetR family protein [Streptomyces sp. Tu6071] Length=215 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 82/216 (38%), Positives = 112/216 (52%), Gaps = 17/216 (7%) Query 3 SQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGL 62 + G+ L+ +L + GP AL TR++AAA GTST AVYTHFG M L+ AI EG Sbjct 6 ADPGLGARLVEEAAGILAEEGPQALTTRRLAAAVGTSTTAVYTHFGSMDDLVRAIVREGF 65 Query 63 RQFDVAL-TVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTL 121 + D + V T DPVAD+ A+G AYR A++ ++Y +MFG + G ++ D Sbjct 66 ARLDQRMGEVAATGDPVADVAALGLAYRGNALDHHYLYGVMFGGSGPGGFSLTDEDR--- 122 Query 122 KVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELA 181 +H + +VRA+ + AGRF D +VA Q W +HG V LEL Sbjct 123 -----QHGRYTLEPLVRAITAAMEAGRFRAG-----DARLVAH--QMWIALHGLVTLELG 170 Query 182 GFYGDRGAAVEPVLAAMTVNLLVALGDSPERAQCSL 217 GF A E AA LLV G +PE A+ +L Sbjct 171 GFLVPPYDA-EHCFAAQVHGLLVGAGAAPEAARSAL 205 >gi|238059249|ref|ZP_04603958.1| transcriptional repressor [Micromonospora sp. ATCC 39149] gi|237881060|gb|EEP69888.1| transcriptional repressor [Micromonospora sp. ATCC 39149] Length=216 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/198 (38%), Positives = 101/198 (52%), Gaps = 21/198 (10%) Query 23 GPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFDVAL-TVPQTADPVADL 81 G L TR++AAA GTST AVYTHFGGM L+ A+ EG + + TV T+D VAD+ Sbjct 26 GAAGLTTRRLAAAVGTSTTAVYTHFGGMDNLVRAMVHEGFARLHRRMSTVRATSDAVADV 85 Query 82 LAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAEIEHQHPSFA--HVVRA 139 +A+G AYR +++ P +Y++MFG + G +AE + QH + +V A Sbjct 86 MALGYAYRANSLDHPQLYQVMFGGAALGG----------FALAEGDRQHGKYTLQPLVDA 135 Query 140 VHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYGDRGAAVEPVLAAMT 199 V R GRF D +VA W +HG V LEL G+ D A + A Sbjct 136 VARAAEQGRFRAG-----DPLLVAQ--NMWIALHGLVSLELGGYLIDPYDA-DVCFEAQL 187 Query 200 VNLLVALGDSPERAQCSL 217 +L+V GD E SL Sbjct 188 RSLMVGAGDEYEATATSL 205 >gi|256380415|ref|YP_003104075.1| TetR family transcriptional regulator [Actinosynnema mirum DSM 43827] gi|255924718|gb|ACU40229.1| transcriptional regulator, TetR family [Actinosynnema mirum DSM 43827] Length=217 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 69/180 (39%), Positives = 92/180 (52%), Gaps = 16/180 (8%) Query 2 TSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEG 61 T +R LL LL GP AL R++AA TST AVY+ FGG L+ A+ EEG Sbjct 25 THDDALRVRLLDRAGELLSTEGPGALSLRRLAADVNTSTTAVYSLFGGKPALLDALYEEG 84 Query 62 LRQFDVAL-TVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 R+++ L +VP T DPV D+ IG AYR +A+ PH Y +MF S S A Sbjct 85 FRRYEQRLASVPGTDDPVEDITRIGRAYREHALADPHFYLVMFSSRSTLDFQPSA----- 139 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 VAE+ +F V+ AV R + G F D++ +A A W +HG + LEL Sbjct 140 -GVAELARG--TFQPVLGAVERAVRDGVF-----VDEEPGQLALA--LWGLVHGLISLEL 189 >gi|326384549|ref|ZP_08206228.1| TetR family transcriptional regulator [Gordonia neofelifaecis NRRL B-59395] gi|326196683|gb|EGD53878.1| TetR family transcriptional regulator [Gordonia neofelifaecis NRRL B-59395] Length=227 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/178 (35%), Positives = 93/178 (53%), Gaps = 10/178 (5%) Query 7 VRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFD 66 VR L + RL+ + G +AL R++A AAGTSTMAVY+ FG + + + E G +F Sbjct 12 VRTTLADSAYRLVTEQGVEALTVRRLAEAAGTSTMAVYSRFGSIGAVAGEVCERGFAEFG 71 Query 67 VALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAE 125 AL V + DPV DL+ G AY ++A P +Y LMF TS + + +L Sbjct 72 AALADVGGSDDPVVDLMCQGLAYLKFATGHPLLYTLMFQYTSPEWVGSQRKSLL------ 125 Query 126 IEHQHPSFAHVVRAVHRCLL-AGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAG 182 +H +P+ + RA + + A R T G D+ ++ + WS +HG ML +AG Sbjct 126 -QHGNPTDSAAGRAAFQVMADAVRRVTEPGTDEGDILIRSGVA-WSTVHGLAMLSIAG 181 >gi|300782819|ref|YP_003763110.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|299792333|gb|ADJ42708.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|340524194|gb|AEK39399.1| TetR family transcriptional regulator [Amycolatopsis mediterranei S699] Length=205 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/186 (37%), Positives = 89/186 (48%), Gaps = 17/186 (9%) Query 2 TSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEG 61 T +R +LL LL GP AL RK+AA AGTST AVY+ FG L+ A+ EG Sbjct 6 THDEALRLKLLDRAGELLAADGPKALSLRKLAADAGTSTTAVYSLFGSKPDLVNALYTEG 65 Query 62 LRQFDVALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 R+F + P T DPV DL+A+G+AYR A+ PH+Y +MF + S G P D Sbjct 66 FRRFGARMAGTPLTGDPVEDLVALGSAYRTSALADPHLYGIMF-TKSVPGFE-PNEDAEK 123 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 L + + R + R + G F D A W+ +HG V LEL Sbjct 124 L-------ARETLKPLERIIRRAIADGVFL-------DVPPETVAVGCWAIVHGLVSLEL 169 Query 181 AGFYGD 186 G D Sbjct 170 TGNLPD 175 >gi|269956031|ref|YP_003325820.1| TetR family transcriptional regulator [Xylanimonas cellulosilytica DSM 15894] gi|269304712|gb|ACZ30262.1| transcriptional regulator, TetR family [Xylanimonas cellulosilytica DSM 15894] Length=212 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/216 (37%), Positives = 98/216 (46%), Gaps = 27/216 (12%) Query 7 VRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFD 66 +R LL ++ G A+ R VA AGTS AVY FG L+AA++EEG R+F Sbjct 11 LRTRLLEVTSEVISSDGESAVTVRGVAVRAGTSASAVYALFGSRDALVAAVSEEGFRRFG 70 Query 67 VAL-TVPQTADPVADLLAIGTAYRRYAIERPHMYRLMF------GSTSAHGINVPARDVL 119 L T DP+ADL +G AYR A+ PH YR+MF GS + ++ P VL Sbjct 71 ARLAAAAHTDDPLADLRVLGRAYRDGALANPHFYRVMFERAVPPGSDAPPAVDRPTFLVL 130 Query 120 TLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLE 179 VA V A+H A A +D A+ WS +HG V LE Sbjct 131 RDAVAR-----------VLALHEAPAAPGAGPGGRASEDVALA-----LWSLVHGLVSLE 174 Query 180 LAGFY-GD---RGAAVEPVLAAMTVNLLVALGDSPE 211 LAG GD R + LAA LL AL P Sbjct 175 LAGLVPGDDAARSDRYDATLAAAGPALLTALAARPS 210 >gi|302524199|ref|ZP_07276541.1| TetR family transcriptional regulator [Streptomyces sp. AA4] gi|302433094|gb|EFL04910.1| TetR family transcriptional regulator [Streptomyces sp. AA4] Length=196 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 68/183 (38%), Positives = 92/183 (51%), Gaps = 21/183 (11%) Query 7 VRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFD 66 +R +LL L+ GP AL RK+AA +GTST AVY+ FG L+ A+ EG R+F Sbjct 11 LRLKLLDRAGELISADGPKALSLRKLAADSGTSTTAVYSLFGSKPDLVNALYVEGFRRFG 70 Query 67 VALT-VPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGI--NVPARDVLTLKV 123 L VP + +PV DL+ +G AYR A+ PH+Y +MF S S G N A +V + Sbjct 71 ARLARVPLSGEPVPDLVRLGVAYRESALADPHLYAIMF-SRSVPGFEPNAEADEVAQATL 129 Query 124 AEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGF 183 A + VVRA + +G+F D A W +HG V LEL+G Sbjct 130 APL-------MGVVRA---AVTSGQF-------QDVAPELITVSLWGFVHGLVSLELSGR 172 Query 184 YGD 186 D Sbjct 173 LPD 175 >gi|262204170|ref|YP_003275378.1| TetR family transcriptional regulator [Gordonia bronchialis DSM 43247] gi|262087517|gb|ACY23485.1| regulatory protein TetR [Gordonia bronchialis DSM 43247] Length=196 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 68/182 (38%), Positives = 86/182 (48%), Gaps = 25/182 (13%) Query 2 TSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEG 61 TS +R L+ AG R+L+ GP L R VA AG + M VY HF G GL+AA+ +G Sbjct 14 TSGADIRPGLIAAGRRILERSGPSGLTVRAVATEAGVAPMGVYNHFDGKEGLLAALVTDG 73 Query 62 LRQFDVALTVPQT-ADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 F A V T ADP L G AYR +A+ P +Y LMF S + T Sbjct 74 FADF--ARRVATTDADPALRLRNSGRAYREFALANPELYALMFSSEC---------EADT 122 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 A+ H FA V+R G+ A + D + A Q WS +HG V LEL Sbjct 123 ETAADAFHV---FAEVIR-------YGQVAGLIMGGDPAGL---AMQAWSCVHGAVSLEL 169 Query 181 AG 182 AG Sbjct 170 AG 171 >gi|296130995|ref|YP_003638245.1| TetR family transcriptional regulator [Cellulomonas flavigena DSM 20109] gi|296022810|gb|ADG76046.1| transcriptional regulator, TetR family [Cellulomonas flavigena DSM 20109] Length=208 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/182 (40%), Positives = 88/182 (49%), Gaps = 17/182 (9%) Query 2 TSQTGVRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEG 61 ++ + RD +L A V LL G AL R VAAAAG ST+ VYTHFGG GL+ A+ + Sbjct 17 STSSSTRDRILAAAVDLLAREGGAALTVRAVAAAAGCSTIGVYTHFGGKTGLVQALLLDA 76 Query 62 LRQFDVAL-TVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLT 120 Q D A+ TV DP A L A AYR +A+ Y LMF VP D Sbjct 77 YEQLDAAVATVDTIVDPYARLDAGAHAYREWALAHRTHYLLMFSPI------VPTVD--P 128 Query 121 LKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLEL 180 + E AH R V + AG AL DD + ATA W+ +HG V +EL Sbjct 129 MPAVEERGAQSYGAHCAR-VEAAVAAG----ALRGDD---VEATAFHLWTSVHGAVSIEL 180 Query 181 AG 182 G Sbjct 181 LG 182 >gi|134096630|ref|YP_001102291.1| TetR family transcriptional regulator [Saccharopolyspora erythraea NRRL 2338] gi|133909253|emb|CAL99365.1| TetR-family transcriptional regulator [Saccharopolyspora erythraea NRRL 2338] Length=229 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/183 (37%), Positives = 87/183 (48%), Gaps = 18/183 (9%) Query 7 VRDELLHAGVRLLDDHGPDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFD 66 +R LL LL + G DAL R +A AA TST AVY+ FGG L+ A+ EEG R+ Sbjct 41 LRLRLLDRAGELLAEGGADALGLRSLAKAADTSTSAVYSLFGGKDELLHALYEEGFRRLA 100 Query 67 VAL-TVPQTADPVADLLAIGTAYRRYAIERPHMYRLMFGSTSAHGINVPARDVLTLKVAE 125 L VP D V L+ + AYR A+E PH YR MF + R Sbjct 101 ERLRAVPADDDIVEHLVRLSHAYRASALEGPHYYRAMFDRRRTAEEDDAVRRA------- 153 Query 126 IEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVATAAQFWSQIHGFVMLELAGFYG 185 H +F ++ V +C+ GR D D +VA+A W+ +HG V LEL+ Sbjct 154 ---GHDAFEPLLETVRQCVEQGRL-----VDADPTLVASA--LWAHVHGLVSLELSNLLP 203 Query 186 DRG 188 D G Sbjct 204 DVG 206 Lambda K H 0.322 0.134 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 303731659968 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40