BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0656c
Length=127
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607796|ref|NP_215170.1| hypothetical protein Rv0656c [Mycob... 254 2e-66
gi|306781501|ref|ZP_07419838.1| toxin [Mycobacterium tuberculosi... 253 5e-66
gi|333988911|ref|YP_004521525.1| hypothetical protein JDM601_027... 176 1e-42
gi|323720879|gb|EGB29945.1| toxin protein [Mycobacterium tubercu... 166 1e-39
gi|337767175|emb|CCB75886.1| Predicted nucleic acid-binding prot... 127 7e-28
gi|345015827|ref|YP_004818181.1| PilT protein domain-containing ... 126 1e-27
gi|291301559|ref|YP_003512837.1| PilT protein domain-containing ... 123 9e-27
gi|239990082|ref|ZP_04710746.1| hypothetical protein SrosN1_2244... 115 2e-24
gi|302559520|ref|ZP_07311862.1| PIN family toxin-antitoxin syste... 115 2e-24
gi|302552928|ref|ZP_07305270.1| conserved hypothetical protein [... 112 1e-23
gi|294996175|ref|ZP_06801866.1| toxin [Mycobacterium tuberculosi... 103 6e-21
gi|290959463|ref|YP_003490645.1| hypothetical protein SCAB_50581... 92.8 2e-17
gi|328882585|emb|CCA55824.1| hypothetical protein SVEN_2538 [Str... 82.8 1e-14
gi|311897887|dbj|BAJ30295.1| hypothetical protein KSE_45120 [Kit... 79.0 2e-13
gi|294631521|ref|ZP_06710081.1| PIN family toxin-antitoxin syste... 76.6 1e-12
gi|29832237|ref|NP_826871.1| hypothetical protein SAV_5694 [Stre... 75.5 2e-12
gi|297193814|ref|ZP_06911212.1| conserved hypothetical protein [... 73.9 8e-12
gi|330466883|ref|YP_004404626.1| PilT protein domain-containing ... 67.8 5e-10
gi|290960653|ref|YP_003491835.1| hypothetical protein SCAB_62781... 60.5 8e-08
gi|294629213|ref|ZP_06707773.1| PIN family toxin-antitoxin syste... 53.9 8e-06
gi|256396515|ref|YP_003118079.1| hypothetical protein Caci_7412 ... 50.8 6e-05
gi|240172880|ref|ZP_04751539.1| hypothetical protein MkanA1_2644... 50.8 6e-05
gi|333992736|ref|YP_004525350.1| hypothetical protein JDM601_409... 48.9 3e-04
gi|294629978|ref|ZP_06708538.1| PIN family toxin-antitoxin syste... 48.5 3e-04
gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces ... 48.1 4e-04
gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin syste... 47.0 9e-04
gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Stre... 46.2 0.002
gi|295840079|ref|ZP_06827012.1| PIN family toxin-antitoxin syste... 45.8 0.002
gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin syste... 44.7 0.005
gi|256389742|ref|YP_003111306.1| hypothetical protein Caci_0521 ... 43.1 0.014
gi|345013748|ref|YP_004816102.1| PilT protein domain-containing ... 43.1 0.015
gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_1465... 42.7 0.016
gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [... 42.4 0.025
gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [... 42.0 0.030
gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kit... 41.2 0.045
gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Stre... 41.2 0.056
gi|328947662|ref|YP_004364999.1| PilT protein domain protein [Tr... 40.8 0.064
gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [... 40.8 0.065
gi|88602729|ref|YP_502907.1| PilT protein-like protein [Methanos... 40.0 0.11
gi|336120115|ref|YP_004574893.1| hypothetical protein MLP_44760 ... 40.0 0.12
gi|257456425|ref|ZP_05621621.1| PIN domain protein [Treponema vi... 39.7 0.15
gi|325970524|ref|YP_004246715.1| PilT protein domain protein [Sp... 39.3 0.19
gi|323358653|ref|YP_004225049.1| nucleic acid-binding protein [M... 38.5 0.38
gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Stre... 38.1 0.42
gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin syste... 38.1 0.44
gi|302869194|ref|YP_003837831.1| PilT protein domain-containing ... 37.4 0.66
gi|315504329|ref|YP_004083216.1| pilt protein domain-containing ... 37.4 0.68
gi|158318849|ref|YP_001511357.1| PilT domain-containing protein ... 37.4 0.84
gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841... 36.2 1.7
gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycob... 36.2 1.9
>gi|15607796|ref|NP_215170.1| hypothetical protein Rv0656c [Mycobacterium tuberculosis H37Rv]
gi|15840059|ref|NP_335096.1| hypothetical protein MT0685 [Mycobacterium tuberculosis CDC1551]
gi|31791840|ref|NP_854333.1| hypothetical protein Mb0675c [Mycobacterium bovis AF2122/97]
59 more sequence titles
Length=127
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/127 (99%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 1 LAAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK 60
+AAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK
Sbjct 1 MAAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK 60
Query 61 SVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR 120
SVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR
Sbjct 61 SVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR 120
Query 121 RVVSADD 127
RVVSADD
Sbjct 121 RVVSADD 127
>gi|306781501|ref|ZP_07419838.1| toxin [Mycobacterium tuberculosis SUMu002]
gi|306783306|ref|ZP_07421628.1| toxin [Mycobacterium tuberculosis SUMu003]
gi|306787675|ref|ZP_07425997.1| toxin [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=127
Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%)
Query 1 LAAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK 60
+AAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK
Sbjct 1 MAAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK 60
Query 61 SVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR 120
SVWRWIDSAQHRLARAGAVGALSVVDLLICDTA ARGLVVLHDDADYELAERHLPDIRVR
Sbjct 61 SVWRWIDSAQHRLARAGAVGALSVVDLLICDTATARGLVVLHDDADYELAERHLPDIRVR 120
Query 121 RVVSADD 127
RVVSADD
Sbjct 121 RVVSADD 127
>gi|333988911|ref|YP_004521525.1| hypothetical protein JDM601_0271 [Mycobacterium sp. JDM601]
gi|333484879|gb|AEF34271.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=138
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/106 (78%), Positives = 93/106 (88%), Gaps = 0/106 (0%)
Query 21 AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG 80
A+GSC+PQRAEF RSARNA+EF+QMS+MF D+YPDVPVPKSVWRWID+AQHRLA AGAV
Sbjct 32 AIGSCDPQRAEFRRSARNANEFEQMSQMFRDIYPDVPVPKSVWRWIDTAQHRLAAAGAVR 91
Query 81 ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSAD 126
ALSVVDLL+C T AA+GL +LHDD DYELA RHLPD+ RRVV D
Sbjct 92 ALSVVDLLVCATGAAKGLTILHDDGDYELAARHLPDVAARRVVDVD 137
>gi|323720879|gb|EGB29945.1| toxin protein [Mycobacterium tuberculosis CDC1551A]
Length=83
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/83 (100%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
Query 45 MSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDD 104
MSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDD
Sbjct 1 MSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDD 60
Query 105 ADYELAERHLPDIRVRRVVSADD 127
ADYELAERHLPDIRVRRVVSADD
Sbjct 61 ADYELAERHLPDIRVRRVVSADD 83
>gi|337767175|emb|CCB75886.1| Predicted nucleic acid-binding protein, contains PIN domain [Streptomyces
cattleya NRRL 8057]
Length=139
Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/104 (61%), Positives = 76/104 (74%), Gaps = 1/104 (0%)
Query 20 RAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARA-GA 78
R +GSC PQR EF RSARN ++QM MF D+YPDVP+PK++W WI+SAQ RLAR+ GA
Sbjct 31 RVIGSCAPQRTEFRRSARNLVHYEQMGEMFADLYPDVPLPKNMWGWIESAQFRLARSGGA 90
Query 79 VGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
V ALS VDL+IC TAA GL+VLHDD D+ A L D+ R V
Sbjct 91 VRALSTVDLMICATAAYHGLIVLHDDNDFVTAAGVLTDVLQRSV 134
>gi|345015827|ref|YP_004818181.1| PilT protein domain-containing protein [Streptomyces violaceusniger
Tu 4113]
gi|344042176|gb|AEM87901.1| PilT protein domain protein [Streptomyces violaceusniger Tu 4113]
Length=138
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/104 (59%), Positives = 75/104 (73%), Gaps = 0/104 (0%)
Query 21 AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG 80
A+GSC PQR EF +SAR DE+D M+ MF D++PDV VPKS W+WI+ Q+RLA+ G
Sbjct 32 AIGSCAPQRTEFRQSARGLDEYDGMTEMFADLFPDVSVPKSAWKWIEVGQYRLAQRGQHQ 91
Query 81 ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVS 124
+LSVVD LIC TAA GLVVLHDDAD+ A R L D+ R V +
Sbjct 92 SLSVVDWLICATAAHHGLVVLHDDADFRAAARLLSDLAERNVFA 135
>gi|291301559|ref|YP_003512837.1| PilT protein domain-containing protein [Stackebrandtia nassauensis
DSM 44728]
gi|290570779|gb|ADD43744.1| PilT protein domain protein [Stackebrandtia nassauensis DSM 44728]
Length=137
Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/102 (59%), Positives = 72/102 (71%), Gaps = 0/102 (0%)
Query 21 AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG 80
AVGSC+PQR EF RSAR+ DEFD MSRMF D+YPDV V KS W+W+DS Q+RL+ G
Sbjct 32 AVGSCQPQRCEFKRSARDRDEFDAMSRMFEDLYPDVAVHKSAWKWMDSVQYRLSAKGKHR 91
Query 81 ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
LSVVDL++ TAA GL+VLHDD D+ PD+ R V
Sbjct 92 GLSVVDLVVAATAAYHGLIVLHDDNDFATVVTEAPDLSERNV 133
>gi|239990082|ref|ZP_04710746.1| hypothetical protein SrosN1_22440 [Streptomyces roseosporus NRRL
11379]
gi|291447096|ref|ZP_06586486.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350043|gb|EFE76947.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length=136
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/97 (58%), Positives = 66/97 (69%), Gaps = 0/97 (0%)
Query 21 AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG 80
A+ SC PQRAEF ARNA E+D++ MF D+YPDV VPKS RWI S QHR+ARAG
Sbjct 31 AIASCYPQRAEFLYGARNAREYDEIVEMFTDLYPDVSVPKSAGRWITSVQHRMARAGQHR 90
Query 81 ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDI 117
+ S VDL+I TAA GL VLHD DY R+ PD+
Sbjct 91 SASAVDLIIAATAAHHGLTVLHDGFDYRTVARYAPDL 127
>gi|302559520|ref|ZP_07311862.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
gi|302477138|gb|EFL40231.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
Length=127
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/102 (56%), Positives = 68/102 (67%), Gaps = 0/102 (0%)
Query 21 AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG 80
A+ SC QRAEF SARN E+D+++ MF D+YPDV VPK+ RWI + QHR+ARAG
Sbjct 22 AIASCYVQRAEFLHSARNGREYDEITEMFTDLYPDVSVPKNAGRWIGAMQHRMARAGEHR 81
Query 81 ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
+ S VDLLI TAA GL VLHDDADY RH D+ V
Sbjct 82 SASAVDLLIAATAAHHGLAVLHDDADYRAIARHASDLTEHNV 123
>gi|302552928|ref|ZP_07305270.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
gi|302470546|gb|EFL33639.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
Length=136
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (56%), Positives = 66/97 (69%), Gaps = 0/97 (0%)
Query 21 AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG 80
A+ SC QRAEF SARN E+D+++ MF D+YPD VPK+ RWI S QHR+A+AG
Sbjct 31 AIASCYVQRAEFLYSARNGREYDEIAEMFTDIYPDAAVPKNAGRWISSVQHRMAQAGEHR 90
Query 81 ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDI 117
+ S VDL+I TAA GL VLHDDADY RH D+
Sbjct 91 SASAVDLVIAATAAHHGLAVLHDDADYRAIARHASDL 127
>gi|294996175|ref|ZP_06801866.1| toxin [Mycobacterium tuberculosis 210]
Length=73
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/55 (99%), Positives = 54/55 (99%), Gaps = 0/55 (0%)
Query 73 LARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSADD 127
ARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSADD
Sbjct 19 FARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSADD 73
>gi|290959463|ref|YP_003490645.1| hypothetical protein SCAB_50581 [Streptomyces scabiei 87.22]
gi|260648989|emb|CBG72103.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=138
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/99 (53%), Positives = 59/99 (60%), Gaps = 0/99 (0%)
Query 24 SCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALS 83
SC PQRAEF RSAR+ E++ MF D+Y DV VPK WI Q R A G ALS
Sbjct 35 SCYPQRAEFLRSARDLKEYEAYHAMFEDLYADVSVPKHAPHWIGGLQLRAAERGEHQALS 94
Query 84 VVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
VDL IC TAA GLVVLHDD D+ A R ++R V
Sbjct 95 AVDLQICATAAHHGLVVLHDDRDFVTAARLAVELRQLNV 133
>gi|328882585|emb|CCA55824.1| hypothetical protein SVEN_2538 [Streptomyces venezuelae ATCC
10712]
Length=138
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/102 (42%), Positives = 58/102 (57%), Gaps = 0/102 (0%)
Query 21 AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG 80
A+G CE R E SA NAD+ + + ++ V VPK WRW++SAQ++L + G
Sbjct 32 AIGMCEATRTELLFSAVNADDREAIEEDLAAMFAPVRVPKDAWRWVESAQYKLTQKGQHR 91
Query 81 ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
A V+DLLIC TA GL VLH D D+ R L ++ + V
Sbjct 92 AAGVIDLLICATAVHHGLTVLHRDNDFATVARVLKEVEQQDV 133
>gi|311897887|dbj|BAJ30295.1| hypothetical protein KSE_45120 [Kitasatospora setae KM-6054]
Length=135
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/115 (40%), Positives = 59/115 (52%), Gaps = 0/115 (0%)
Query 6 TTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRW 65
T G R E A + CEP RAEF SA D+++ + VPKS WRW
Sbjct 17 TPGALRAWEGHIAAGVLHVCEPTRAEFLYSATGPAHRDELADELDALCGTAAVPKSAWRW 76
Query 66 IDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR 120
+DSAQ+RL + G + +DLL+C TAA L VLH D D+ + D+R R
Sbjct 77 VDSAQYRLTQRGLHRSAGAIDLLVCATAAHHDLTVLHVDNDFTTVASVVSDVRER 131
>gi|294631521|ref|ZP_06710081.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. e14]
gi|292834854|gb|EFF93203.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. e14]
Length=136
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/98 (40%), Positives = 54/98 (56%), Gaps = 0/98 (0%)
Query 25 CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV 84
CEP R EF SA D ++ + VPKS WRW+D+AQ++L + G +
Sbjct 36 CEPTRTEFLYSATGPAHRDDLAGELDTLCALAAVPKSAWRWVDTAQYKLTQKGQHRSAGA 95
Query 85 VDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
+DLL+C TAA L VLH D D+ R LP++R + V
Sbjct 96 IDLLVCATAAHHDLTVLHLDDDFGTVARVLPELREQNV 133
>gi|29832237|ref|NP_826871.1| hypothetical protein SAV_5694 [Streptomyces avermitilis MA-4680]
gi|29609355|dbj|BAC73406.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=135
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (39%), Positives = 55/98 (57%), Gaps = 0/98 (0%)
Query 25 CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV 84
CEP RAEF SA + D+++ + PVPK+ WRW+D+AQ++L + G A
Sbjct 36 CEPTRAEFLYSATSPTHRDELAEELDALCLLSPVPKNAWRWVDTAQYKLTQQGQHRAAGA 95
Query 85 VDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
+DLL+C TA G VLH D D+ L +++ R V
Sbjct 96 IDLLVCATAVHHGHTVLHVDNDFATVAGVLKELQQRDV 133
>gi|297193814|ref|ZP_06911212.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721228|gb|EDY65136.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=140
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/83 (41%), Positives = 47/83 (57%), Gaps = 0/83 (0%)
Query 25 CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV 84
CEP +AEF SA D + D++P VP W W+D+AQ++L + G +
Sbjct 37 CEPTKAEFLHSATGPAHRDDLETRLHDMFPAARVPGGAWSWVDTAQYKLTQKGQHRSAGP 96
Query 85 VDLLICDTAAARGLVVLHDDADY 107
+DLL+C TA GLVVLH D D+
Sbjct 97 LDLLLCATAVHHGLVVLHRDNDF 119
>gi|330466883|ref|YP_004404626.1| PilT protein domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328809854|gb|AEB44026.1| PilT protein domain-containing protein [Verrucosispora maris
AB-18-032]
Length=131
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/106 (38%), Positives = 58/106 (55%), Gaps = 1/106 (0%)
Query 17 AAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARA 76
AA+ +G C+P E A +A +D++ R D+YP VPVP W+ + + + LA
Sbjct 26 AARGLIGICDPVLVETLTIA-DAKAYDRVERGLRDLYPWVPVPDDAWQVVRAVRQELASH 84
Query 77 GAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
A LSV D L+ TA LVVLH +AD+E A R +P + R+
Sbjct 85 NAHQGLSVADHLVAATAIRLKLVVLHQNADFETAARLVPQLSQERI 130
>gi|290960653|ref|YP_003491835.1| hypothetical protein SCAB_62781 [Streptomyces scabiei 87.22]
gi|260650179|emb|CBG73295.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=138
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/66 (43%), Positives = 40/66 (61%), Gaps = 0/66 (0%)
Query 57 PVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPD 116
PVPK+ WRW+++AQ++L + G A V+DLL+C TA G VLH D D+ L +
Sbjct 71 PVPKNAWRWVETAQYKLTQQGQHQAAGVIDLLVCATAVHYGHTVLHVDNDFPTVAGVLKE 130
Query 117 IRVRRV 122
+ R V
Sbjct 131 VEQRDV 136
>gi|294629213|ref|ZP_06707773.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. e14]
gi|292832546|gb|EFF90895.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. e14]
Length=135
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/104 (33%), Positives = 49/104 (48%), Gaps = 1/104 (0%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA 81
VG CEP R EF R+ + + + + +P P+ W Q LA G
Sbjct 33 VGLCEPVRQEFLRAVGGRPSYYEADTLLRETFPYCPMRDFAWEDAAELQQALADRGWHQC 92
Query 82 LSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSA 125
S VDLL+ TA + VLH+DAD+E R + VRR+++
Sbjct 93 ASPVDLLVAVTAGHHKMTVLHEDADFETIAR-VTGQPVRRILAG 135
>gi|256396515|ref|YP_003118079.1| hypothetical protein Caci_7412 [Catenulispora acidiphila DSM
44928]
gi|256362741|gb|ACU76238.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=85
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/67 (41%), Positives = 36/67 (54%), Gaps = 5/67 (7%)
Query 57 PVPKSVWRWIDSAQHRLA-----RAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAE 111
PVPK WRW+D+AQ++L R +DLL+ TA GL VLH D D+
Sbjct 13 PVPKDAWRWVDTAQYKLTLKSQHRKSQHRGPGPIDLLVAATAVHHGLTVLHVDNDFVTIA 72
Query 112 RHLPDIR 118
LP++R
Sbjct 73 FVLPELR 79
>gi|240172880|ref|ZP_04751539.1| hypothetical protein MkanA1_26442 [Mycobacterium kansasii ATCC
12478]
Length=140
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/94 (35%), Positives = 47/94 (50%), Gaps = 0/94 (0%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA 81
V + AE SARN +++Q+ Y +P W+ AQ +LA G A
Sbjct 35 VATTAQLDAEALYSARNPADYEQLWSDRRAAYEYLPTNDEHWQTALGAQRKLASTGRHRA 94
Query 82 LSVVDLLICDTAAARGLVVLHDDADYELAERHLP 115
+ + DLLI AAA + ++H DAD+E+A LP
Sbjct 95 VGMADLLIATLAAAHDMTLIHYDADFEIAAEVLP 128
>gi|333992736|ref|YP_004525350.1| hypothetical protein JDM601_4096 [Mycobacterium sp. JDM601]
gi|333488704|gb|AEF38096.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=131
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (33%), Positives = 47/102 (47%), Gaps = 1/102 (0%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARA-GAVG 80
V CE E+ SAR+ ++D S D YP +P P ++ + Q LA G
Sbjct 29 VALCEMSELEWLYSARSGADYDSQSAAVRDAYPVLPAPADIFDRVRRLQRDLAHHRGMWH 88
Query 81 ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
+ DL I +TA G VLH D DY+ + D +VR +
Sbjct 89 RTPLPDLFIAETALHHGAGVLHRDRDYQRIRKVRSDFQVREL 130
>gi|294629978|ref|ZP_06708538.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. e14]
gi|292833311|gb|EFF91660.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. e14]
Length=134
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (31%), Positives = 47/106 (45%), Gaps = 0/106 (0%)
Query 16 RAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLAR 75
RAA+ + C P AE R+ +++ + + VP P W+ + Q LAR
Sbjct 25 RAARGLLAICPPVEAELMPGLRSDRDYEPFFTVLSQTFGRVPAPDDPWQKVLGVQRDLAR 84
Query 76 AGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRR 121
G S +D+LI TA L VLH D D+ + P I + R
Sbjct 85 IGHHRGPSPMDILIALTAEHHHLTVLHVDDDFAAIAKVRPGIAMVR 130
>gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces sp. C]
gi|302443399|gb|EFL15215.1| predicted protein [Streptomyces sp. C]
Length=140
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/91 (31%), Positives = 46/91 (51%), Gaps = 0/91 (0%)
Query 18 AQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAG 77
A+ +G CE E SA++ + + + G+++ PVP+SV+ + Q L G
Sbjct 31 AEGVIGICEVTELEILFSAKSLADRLEKEALLGELFNWTPVPESVYVRARAVQRLLTGRG 90
Query 78 AVGALSVVDLLICDTAAARGLVVLHDDADYE 108
+ VDLL+ TA GL +LH D D++
Sbjct 91 EHRSAGPVDLLVAATAELTGLTLLHYDKDFD 121
>gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
hygroscopicus ATCC 53653]
gi|302462202|gb|EFL25295.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
himastatinicus ATCC 53653]
Length=138
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/78 (39%), Positives = 38/78 (49%), Gaps = 1/78 (1%)
Query 31 EFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLIC 90
E SARNA+E D++ R + +P P VW Q + G A S+ DLLI
Sbjct 42 EILYSARNANEADRLGRWLTG-FDYLPCPDEVWDAALDIQRQAIAKGNHRAFSMADLLIA 100
Query 91 DTAAARGLVVLHDDADYE 108
TA G VLH D DY+
Sbjct 101 ATAQRHGATVLHYDGDYD 118
>gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294814925|ref|ZP_06773568.1| toxin [Streptomyces clavuligerus ATCC 27064]
gi|326443296|ref|ZP_08218030.1| PilT protein domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|197702707|gb|EDY48519.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294327524|gb|EFG09167.1| toxin [Streptomyces clavuligerus ATCC 27064]
Length=139
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/110 (34%), Positives = 50/110 (46%), Gaps = 5/110 (4%)
Query 2 AAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFG--DVYPDVPVP 59
A A G LE + + VG+ E SARNAD+++ RM G + P
Sbjct 14 ARAGKPGVRAALEPKLLRGLVGTSGIIDLELLFSARNADDYE---RMLGRRQAFEWFPTT 70
Query 60 KSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYEL 109
+ Q AR G ALS+ DLL+ TA GL +LH D D++L
Sbjct 71 DEIVARAIEVQGFCARKGNHRALSIPDLLVAATAERHGLTLLHYDGDFDL 120
>gi|295840079|ref|ZP_06827012.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. SPB74]
gi|197697029|gb|EDY43962.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. SPB74]
Length=139
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (32%), Positives = 45/101 (45%), Gaps = 0/101 (0%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA 81
VG P E C SA+ A + D++ + G ++ V + + Q L + GA +
Sbjct 33 VGIIPPIEFEICYSAQKARDRDELLQKLGLLFSAVTPTPAAYDAGRDMQEALTKHGAHRS 92
Query 82 LSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
VDLL+ TA L VLH D DY R P R R+
Sbjct 93 CGPVDLLLAGTAHVESLTVLHVDKDYVTLARLWPSFRQVRL 133
>gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
gi|302475573|gb|EFL38666.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
Length=136
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/78 (39%), Positives = 38/78 (49%), Gaps = 1/78 (1%)
Query 31 EFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLIC 90
E SARN E ++ R + + +P P W Q + R G ALS+ DLLI
Sbjct 40 EILYSARNPAEAGKL-RYWLAGFDYLPCPDECWDRAKDVQAQATRTGNHRALSMADLLIA 98
Query 91 DTAAARGLVVLHDDADYE 108
TA G+ VLH D DYE
Sbjct 99 ATAERHGVRVLHYDEDYE 116
>gi|256389742|ref|YP_003111306.1| hypothetical protein Caci_0521 [Catenulispora acidiphila DSM
44928]
gi|256355968|gb|ACU69465.1| hypothetical protein Caci_0521 [Catenulispora acidiphila DSM
44928]
Length=92
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/78 (30%), Positives = 39/78 (50%), Gaps = 0/78 (0%)
Query 45 MSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDD 104
+S + ++ VP P W+ + QH L + G +D+L+ TA L VLH D
Sbjct 14 VSTLLNSLFGWVPCPDDPWQQVIGIQHDLIKIGHDRGPGAIDILVALTAVQHRLTVLHLD 73
Query 105 ADYELAERHLPDIRVRRV 122
D+ + PDI+V+++
Sbjct 74 NDFAAIAKVRPDIQVQQL 91
>gi|345013748|ref|YP_004816102.1| PilT protein domain-containing protein [Streptomyces violaceusniger
Tu 4113]
gi|344040097|gb|AEM85822.1| PilT protein domain protein [Streptomyces violaceusniger Tu 4113]
Length=139
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/85 (33%), Positives = 40/85 (48%), Gaps = 1/85 (1%)
Query 25 CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV 84
C P E SARN ++ ++ F + +P+P VW Q + G ALS+
Sbjct 36 CGPVEMEVMYSARNDNDAKRL-HWFLSGFDYLPMPDEVWDRAKDIQRQAITKGNHRALSM 94
Query 85 VDLLICDTAAARGLVVLHDDADYEL 109
DLLI A + VLH D DY++
Sbjct 95 PDLLIAAAAERHAVTVLHYDQDYDM 119
>gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_14659 [Streptomyces roseosporus NRRL
11379]
gi|291445528|ref|ZP_06584918.1| PilT protein domain-containing protein [Streptomyces roseosporus
NRRL 15998]
gi|291348475|gb|EFE75379.1| PilT protein domain-containing protein [Streptomyces roseosporus
NRRL 15998]
Length=135
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/91 (31%), Positives = 43/91 (48%), Gaps = 1/91 (1%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA 81
V C+ E SAR+ ++ +++ +Y P+P V+R + Q +L G
Sbjct 34 VALCDLTELELLYSARSTEDREKVRERLA-LYTWCPMPDGVFRRARTVQDQLTAKGEHRN 92
Query 82 LSVVDLLICDTAAARGLVVLHDDADYELAER 112
VDLL+ TA GL +LH D D+E R
Sbjct 93 AGPVDLLLAATAEQSGLTLLHYDRDFETIAR 123
>gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302444994|gb|EFL16810.1| conserved hypothetical protein [Streptomyces sp. C]
Length=138
Score = 42.4 bits (98), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/88 (33%), Positives = 42/88 (48%), Gaps = 1/88 (1%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA 81
+G C E SAR+ + D++ G + + P VW Q +L AG A
Sbjct 33 LGVCGAVELEVLYSARSKGDADRVRAGLG-AFAWLSTPDEVWDRALDVQKQLIVAGNWKA 91
Query 82 LSVVDLLICDTAAARGLVVLHDDADYEL 109
+S+ DL+I TA G VLH D DY++
Sbjct 92 VSLPDLVIAATAERHGATVLHYDGDYDM 119
>gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355304|gb|EFE82206.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=135
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/102 (31%), Positives = 44/102 (44%), Gaps = 1/102 (0%)
Query 11 RGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQ 70
R E R V C+ E SAR+ + D + ++ P+P V+R + Q
Sbjct 23 REWEHRIGAGLVSLCDLTELELLYSARSTSDRDAIRDRLS-LFTWCPMPDGVFRRARTVQ 81
Query 71 HRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAER 112
L G + VDLL+ TA GL +LH D D+E R
Sbjct 82 ALLTDKGEHRSAGAVDLLLAATAEQSGLTLLHHDRDFETVAR 123
>gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kitasatospora setae KM-6054]
Length=139
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/93 (33%), Positives = 44/93 (48%), Gaps = 2/93 (2%)
Query 18 AQRAVGSCEPQ-RAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARA 76
+QRA+ + P E SAR E +++ + + + P VW Q +
Sbjct 29 SQRALLAISPTVEMEVLYSARTLAEAERLRHLLRG-FDYLSCPDEVWDRAKQVQQQALFR 87
Query 77 GAVGALSVVDLLICDTAAARGLVVLHDDADYEL 109
G ALS+ DLLI TA G+ VLH D DY++
Sbjct 88 GNHRALSMADLLIAATAERHGVTVLHYDGDYDM 120
>gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Streptomyces bingchenggensis
BCW-1]
Length=138
Score = 41.2 bits (95), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/86 (34%), Positives = 42/86 (49%), Gaps = 3/86 (3%)
Query 25 CEPQRAEFCRSARNADEFDQM-SRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALS 83
C E SAR+ + +++ M G + +P P W Q +L AG ALS
Sbjct 36 CGAVELEVLHSARSKGDAERIRDEMRG--FDWLPTPDEAWDRALEVQTQLIAAGNWKALS 93
Query 84 VVDLLICDTAAARGLVVLHDDADYEL 109
V DL+I TA ++VLH D DY++
Sbjct 94 VSDLVIAATAERHSVIVLHYDGDYDM 119
>gi|328947662|ref|YP_004364999.1| PilT protein domain protein [Treponema succinifaciens DSM 2489]
gi|328447986|gb|AEB13702.1| PilT protein domain protein [Treponema succinifaciens DSM 2489]
Length=133
Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/115 (26%), Positives = 52/115 (46%), Gaps = 2/115 (1%)
Query 6 TTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRW 65
T GT L + ++ E E + ++N EF + G++ P + + +
Sbjct 18 TAGTRYLEALISEEKPFCINEFIYQELLQGSKNEKEFSTLKSYLGEI-PLYSLKLGIQSY 76
Query 66 IDSAQHRLA-RAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRV 119
++A L R V S VDLLI +TA + +LHDD D+ R + ++++
Sbjct 77 ENAAILNLKCRRKGVTIRSTVDLLIAETAIENNIPLLHDDEDFVNMARVITELKL 131
>gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197710357|gb|EDY54391.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=139
Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVP-KSVWRWIDSAQHRLARAGAVG 80
+ C EF SARNA++ ++ + ++ P+ ++V R D Q L G
Sbjct 34 ISRCPMTEVEFLYSARNAEDRSELVQDLDALFGWTPLDDRAVSRAWD-VQRELTEKGQHR 92
Query 81 ALSVVDLLICDTAAARGLVVLHDDADYE 108
+ VDLL+ TA +GL +LH D D+E
Sbjct 93 SAGAVDLLVAATAELQGLTMLHYDNDFE 120
>gi|88602729|ref|YP_502907.1| PilT protein-like protein [Methanospirillum hungatei JF-1]
gi|88188191|gb|ABD41188.1| PilT protein-like protein [Methanospirillum hungatei JF-1]
Length=139
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/89 (26%), Positives = 39/89 (44%), Gaps = 3/89 (3%)
Query 27 PQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVD 86
P R E +A +F+++ YPD+P+ ++ + +AG G+L+ D
Sbjct 45 PIRQELLSGISSAAQFEKLKNHLSH-YPDMPLKIEIYEKAAKYFNICRKAGVQGSLT--D 101
Query 87 LLICDTAAARGLVVLHDDADYELAERHLP 115
LIC A L + D D+ H+P
Sbjct 102 FLICAVATEADLKIYTLDKDFSYYANHIP 130
>gi|336120115|ref|YP_004574893.1| hypothetical protein MLP_44760 [Microlunatus phosphovorus NM-1]
gi|334687905|dbj|BAK37490.1| hypothetical protein MLP_44760 [Microlunatus phosphovorus NM-1]
Length=132
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/104 (29%), Positives = 53/104 (51%), Gaps = 11/104 (10%)
Query 25 CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWI-----DSAQHR-LARAGA 78
CE E+ SAR+A ++D +++ V P +++ + D A HR + A
Sbjct 34 CEMGLLEWLYSARSALDYDTQHTELREMFHIVEAPANIFDRVLQLQADLAHHRSMWHRRA 93
Query 79 VGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV 122
+G DL I +TA A VLH D+D+EL ++ P++ ++ +
Sbjct 94 LG-----DLFIAETALAHQAGVLHADSDFELIQQVRPNLLLKSL 132
>gi|257456425|ref|ZP_05621621.1| PIN domain protein [Treponema vincentii ATCC 35580]
gi|257446085|gb|EEV21132.1| PIN domain protein [Treponema vincentii ATCC 35580]
Length=133
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/116 (28%), Positives = 54/116 (47%), Gaps = 4/116 (3%)
Query 6 TTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRW 65
T GT +L AQ+ E E + +++ EF + DV P + + + +
Sbjct 18 TVGTAYFEKLLEAQKHFCINEFIYQELLQGSKDEKEFAVLKSYLMDV-PLYSLKRGIQSF 76
Query 66 IDSA--QHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRV 119
++A R R G V S VDLLI +TA + +LHDD D+ R + ++++
Sbjct 77 ENAALLNFRCRRKG-VTIRSTVDLLIAETAIENNIPLLHDDDDFTNMARIITELKL 131
>gi|325970524|ref|YP_004246715.1| PilT protein domain protein [Spirochaeta sp. Buddy]
gi|324025762|gb|ADY12521.1| PilT protein domain protein [Spirochaeta sp. Buddy]
Length=130
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/94 (33%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query 30 AEFCRSARNADEFDQMSRMFGDV-YPDVPVPKSVWRWIDSAQH-RLARAGAVGALSVVDL 87
EF + R+ +F Q R+ + Y D + K + I +AQ+ RL R V +D+
Sbjct 41 VEFLQGFRDNKQFQQARRLMDSLEYYDF-IGKDMA--IKAAQNFRLLRKKGVTIHKTIDV 97
Query 88 LICDTAAARGLVVLHDDADYELAERHLPDIRVRR 121
LI G +LH+D +YE E+ L +RVRR
Sbjct 98 LIATFCIEHGFGLLHNDKEYEQMEKILG-LRVRR 130
>gi|323358653|ref|YP_004225049.1| nucleic acid-binding protein [Microbacterium testaceum StLB037]
gi|323275024|dbj|BAJ75169.1| predicted nucleic acid-binding protein [Microbacterium testaceum
StLB037]
Length=137
Score = 38.5 bits (88), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/86 (35%), Positives = 40/86 (47%), Gaps = 4/86 (4%)
Query 24 SCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVP-KSVWRWIDSAQHRLARAGAVGAL 82
+C PQ EFC SAR+ +E +P P +S+ I SA L AG V A
Sbjct 38 TCPPQVLEFCHSARSPEEHAHYLEQISLGFPLERAPDESLAVGIQSA---LWNAGLVRAA 94
Query 83 SVVDLLICDTAAARGLVVLHDDADYE 108
VD+LI A A +L D D++
Sbjct 95 GAVDILIAAYAIANDATILSADHDFD 120
>gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Streptomyces bingchenggensis
BCW-1]
Length=139
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/85 (31%), Positives = 38/85 (45%), Gaps = 1/85 (1%)
Query 25 CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV 84
C P E SARN ++ ++ + +P+ VW Q + G ALS+
Sbjct 36 CGPVEIEVMYSARNENDAKRLHWFLAG-FDYLPMTDEVWDRAKDVQRQAIAKGNHRALSM 94
Query 85 VDLLICDTAAARGLVVLHDDADYEL 109
DLLI A + VLH D DY++
Sbjct 95 PDLLIAAAAERHVVTVLHYDQDYDM 119
>gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
hygroscopicus ATCC 53653]
gi|302464447|gb|EFL27540.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
himastatinicus ATCC 53653]
Length=140
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/87 (32%), Positives = 33/87 (38%), Gaps = 0/87 (0%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA 81
V CE E R+ DE + R D + PVP Q L
Sbjct 34 VAVCEITELELVRATGGRDERAVLERYLHDAFGWTPVPDRALTRARQVQDLLVATSWHQG 93
Query 82 LSVVDLLICDTAAARGLVVLHDDADYE 108
VDL+ TA GL +LH DAD+E
Sbjct 94 PGAVDLMTAATAELCGLTLLHYDADFE 120
>gi|302869194|ref|YP_003837831.1| PilT protein domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302572053|gb|ADL48255.1| PilT protein domain protein [Micromonospora aurantiaca ATCC 27029]
Length=139
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/87 (33%), Positives = 41/87 (48%), Gaps = 4/87 (4%)
Query 23 GSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGAL 82
G+ E + RSA++A + R F + +P +W Q + G AL
Sbjct 38 GAIEIEVIHSARSAKDAKRARWLLRGFDWL----AMPDDIWDRAIDIQVQTLHKGNHRAL 93
Query 83 SVVDLLICDTAAARGLVVLHDDADYEL 109
S+ DLLI TA G+ VLH D D++L
Sbjct 94 SMADLLIAATAERHGVTVLHYDGDFDL 120
>gi|315504329|ref|YP_004083216.1| pilt protein domain-containing protein [Micromonospora sp. L5]
gi|315410948|gb|ADU09065.1| PilT protein domain protein [Micromonospora sp. L5]
Length=139
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/87 (33%), Positives = 41/87 (48%), Gaps = 4/87 (4%)
Query 23 GSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGAL 82
G+ E + RSA++A + R F + +P +W Q + G AL
Sbjct 38 GAIEIEVVHSARSAKDAKRARWLLRGFDWL----AMPDDIWDRAIDIQVQALHKGNHRAL 93
Query 83 SVVDLLICDTAAARGLVVLHDDADYEL 109
S+ DLLI TA G+ VLH D D++L
Sbjct 94 SMADLLIAATAERHGVTVLHYDGDFDL 120
>gi|158318849|ref|YP_001511357.1| PilT domain-containing protein [Frankia sp. EAN1pec]
gi|158114254|gb|ABW16451.1| PilT protein domain protein [Frankia sp. EAN1pec]
Length=159
Score = 37.4 bits (85), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/82 (41%), Positives = 40/82 (49%), Gaps = 5/82 (6%)
Query 31 EFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSA---QHRLARAGAVGALSVVDL 87
E SAR+A D R+ + +PV + R A Q LA G A SV DL
Sbjct 65 EVGFSARSAQ--DLRVRLRRSLVSAMPVENTTPRIEARAVEIQELLASTGHHRAPSVPDL 122
Query 88 LICDTAAARGLVVLHDDADYEL 109
+I TA GLVVLH D D+EL
Sbjct 123 IIAATAELAGLVVLHVDKDFEL 144
>gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841 [Mycobacterium canettii CIPT
140010059]
gi|340005948|emb|CCC45115.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=138
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/87 (28%), Positives = 37/87 (43%), Gaps = 0/87 (0%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA 81
+ C EF SAR+ ++ + D V P +VW Q L G +
Sbjct 33 LARCGITDLEFGVSARSREDHRTLGTYRRDALEYVNTPDTVWDRAWEIQEALTDKGFHRS 92
Query 82 LSVVDLLICDTAAARGLVVLHDDADYE 108
+ + DL+I A G+ V+H D D+E
Sbjct 93 VKIPDLIIAAVAEHHGIPVMHYDQDFE 119
>gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycobacterium tuberculosis H37Rv]
gi|15842295|ref|NP_337332.1| hypothetical protein MT2827 [Mycobacterium tuberculosis CDC1551]
gi|31793931|ref|NP_856424.1| hypothetical protein Mb2778c [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=138
Score = 36.2 bits (82), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/87 (28%), Positives = 37/87 (43%), Gaps = 0/87 (0%)
Query 22 VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA 81
+ C EF SAR+ ++ + D V P +VW Q L G +
Sbjct 33 LARCGITDLEFGVSARSREDHRTLGTYRRDALEYVNTPDTVWVRAWEIQEALTDKGFHRS 92
Query 82 LSVVDLLICDTAAARGLVVLHDDADYE 108
+ + DL+I A G+ V+H D D+E
Sbjct 93 VKIPDLIIAAVAEHHGIPVMHYDQDFE 119
Lambda K H
0.322 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129319095676
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40