BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0656c

Length=127
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607796|ref|NP_215170.1|  hypothetical protein Rv0656c [Mycob...   254    2e-66
gi|306781501|ref|ZP_07419838.1|  toxin [Mycobacterium tuberculosi...   253    5e-66
gi|333988911|ref|YP_004521525.1|  hypothetical protein JDM601_027...   176    1e-42
gi|323720879|gb|EGB29945.1|  toxin protein [Mycobacterium tubercu...   166    1e-39
gi|337767175|emb|CCB75886.1|  Predicted nucleic acid-binding prot...   127    7e-28
gi|345015827|ref|YP_004818181.1|  PilT protein domain-containing ...   126    1e-27
gi|291301559|ref|YP_003512837.1|  PilT protein domain-containing ...   123    9e-27
gi|239990082|ref|ZP_04710746.1|  hypothetical protein SrosN1_2244...   115    2e-24
gi|302559520|ref|ZP_07311862.1|  PIN family toxin-antitoxin syste...   115    2e-24
gi|302552928|ref|ZP_07305270.1|  conserved hypothetical protein [...   112    1e-23
gi|294996175|ref|ZP_06801866.1|  toxin [Mycobacterium tuberculosi...   103    6e-21
gi|290959463|ref|YP_003490645.1|  hypothetical protein SCAB_50581...  92.8    2e-17
gi|328882585|emb|CCA55824.1|  hypothetical protein SVEN_2538 [Str...  82.8    1e-14
gi|311897887|dbj|BAJ30295.1|  hypothetical protein KSE_45120 [Kit...  79.0    2e-13
gi|294631521|ref|ZP_06710081.1|  PIN family toxin-antitoxin syste...  76.6    1e-12
gi|29832237|ref|NP_826871.1|  hypothetical protein SAV_5694 [Stre...  75.5    2e-12
gi|297193814|ref|ZP_06911212.1|  conserved hypothetical protein [...  73.9    8e-12
gi|330466883|ref|YP_004404626.1|  PilT protein domain-containing ...  67.8    5e-10
gi|290960653|ref|YP_003491835.1|  hypothetical protein SCAB_62781...  60.5    8e-08
gi|294629213|ref|ZP_06707773.1|  PIN family toxin-antitoxin syste...  53.9    8e-06
gi|256396515|ref|YP_003118079.1|  hypothetical protein Caci_7412 ...  50.8    6e-05
gi|240172880|ref|ZP_04751539.1|  hypothetical protein MkanA1_2644...  50.8    6e-05
gi|333992736|ref|YP_004525350.1|  hypothetical protein JDM601_409...  48.9    3e-04
gi|294629978|ref|ZP_06708538.1|  PIN family toxin-antitoxin syste...  48.5    3e-04
gi|302534504|ref|ZP_07286846.1|  predicted protein [Streptomyces ...  48.1    4e-04
gi|302544584|ref|ZP_07296926.1|  PIN family toxin-antitoxin syste...  47.0    9e-04
gi|254388989|ref|ZP_05004220.1|  conserved membrane protein [Stre...  46.2    0.002
gi|295840079|ref|ZP_06827012.1|  PIN family toxin-antitoxin syste...  45.8    0.002
gi|302557955|ref|ZP_07310297.1|  PIN family toxin-antitoxin syste...  44.7    0.005
gi|256389742|ref|YP_003111306.1|  hypothetical protein Caci_0521 ...  43.1    0.014
gi|345013748|ref|YP_004816102.1|  PilT protein domain-containing ...  43.1    0.015
gi|239988547|ref|ZP_04709211.1|  hypothetical protein SrosN1_1465...  42.7    0.016
gi|302536099|ref|ZP_07288441.1|  conserved hypothetical protein [...  42.4    0.025
gi|291452355|ref|ZP_06591745.1|  conserved hypothetical protein [...  42.0    0.030
gi|311897824|dbj|BAJ30232.1|  hypothetical protein KSE_44490 [Kit...  41.2    0.045
gi|297160784|gb|ADI10496.1|  hypothetical protein SBI_07376 [Stre...  41.2    0.056
gi|328947662|ref|YP_004364999.1|  PilT protein domain protein [Tr...  40.8    0.064
gi|297199892|ref|ZP_06917289.1|  conserved hypothetical protein [...  40.8    0.065
gi|88602729|ref|YP_502907.1|  PilT protein-like protein [Methanos...  40.0    0.11 
gi|336120115|ref|YP_004574893.1|  hypothetical protein MLP_44760 ...  40.0    0.12 
gi|257456425|ref|ZP_05621621.1|  PIN domain protein [Treponema vi...  39.7    0.15 
gi|325970524|ref|YP_004246715.1|  PilT protein domain protein [Sp...  39.3    0.19 
gi|323358653|ref|YP_004225049.1|  nucleic acid-binding protein [M...  38.5    0.38 
gi|297154824|gb|ADI04536.1|  hypothetical protein SBI_01415 [Stre...  38.1    0.42 
gi|302546829|ref|ZP_07299171.1|  PIN family toxin-antitoxin syste...  38.1    0.44 
gi|302869194|ref|YP_003837831.1|  PilT protein domain-containing ...  37.4    0.66 
gi|315504329|ref|YP_004083216.1|  pilt protein domain-containing ...  37.4    0.68 
gi|158318849|ref|YP_001511357.1|  PilT domain-containing protein ...  37.4    0.84 
gi|340627758|ref|YP_004746210.1|  hypothetical protein MCAN_27841...  36.2    1.7  
gi|15609894|ref|NP_217273.1|  hypothetical protein Rv2757c [Mycob...  36.2    1.9  


>gi|15607796|ref|NP_215170.1| hypothetical protein Rv0656c [Mycobacterium tuberculosis H37Rv]
 gi|15840059|ref|NP_335096.1| hypothetical protein MT0685 [Mycobacterium tuberculosis CDC1551]
 gi|31791840|ref|NP_854333.1| hypothetical protein Mb0675c [Mycobacterium bovis AF2122/97]
 59 more sequence titles
 Length=127

 Score =  254 bits (650),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 126/127 (99%), Positives = 127/127 (100%), Gaps = 0/127 (0%)

Query  1    LAAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK  60
            +AAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK
Sbjct  1    MAAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK  60

Query  61   SVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR  120
            SVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR
Sbjct  61   SVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR  120

Query  121  RVVSADD  127
            RVVSADD
Sbjct  121  RVVSADD  127


>gi|306781501|ref|ZP_07419838.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|306783306|ref|ZP_07421628.1| toxin [Mycobacterium tuberculosis SUMu003]
 gi|306787675|ref|ZP_07425997.1| toxin [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 Length=127

 Score =  253 bits (647),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 125/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%)

Query  1    LAAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK  60
            +AAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK
Sbjct  1    MAAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPK  60

Query  61   SVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR  120
            SVWRWIDSAQHRLARAGAVGALSVVDLLICDTA ARGLVVLHDDADYELAERHLPDIRVR
Sbjct  61   SVWRWIDSAQHRLARAGAVGALSVVDLLICDTATARGLVVLHDDADYELAERHLPDIRVR  120

Query  121  RVVSADD  127
            RVVSADD
Sbjct  121  RVVSADD  127


>gi|333988911|ref|YP_004521525.1| hypothetical protein JDM601_0271 [Mycobacterium sp. JDM601]
 gi|333484879|gb|AEF34271.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=138

 Score =  176 bits (446),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 82/106 (78%), Positives = 93/106 (88%), Gaps = 0/106 (0%)

Query  21   AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG  80
            A+GSC+PQRAEF RSARNA+EF+QMS+MF D+YPDVPVPKSVWRWID+AQHRLA AGAV 
Sbjct  32   AIGSCDPQRAEFRRSARNANEFEQMSQMFRDIYPDVPVPKSVWRWIDTAQHRLAAAGAVR  91

Query  81   ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSAD  126
            ALSVVDLL+C T AA+GL +LHDD DYELA RHLPD+  RRVV  D
Sbjct  92   ALSVVDLLVCATGAAKGLTILHDDGDYELAARHLPDVAARRVVDVD  137


>gi|323720879|gb|EGB29945.1| toxin protein [Mycobacterium tuberculosis CDC1551A]
Length=83

 Score =  166 bits (420),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 83/83 (100%), Positives = 83/83 (100%), Gaps = 0/83 (0%)

Query  45   MSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDD  104
            MSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDD
Sbjct  1    MSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDD  60

Query  105  ADYELAERHLPDIRVRRVVSADD  127
            ADYELAERHLPDIRVRRVVSADD
Sbjct  61   ADYELAERHLPDIRVRRVVSADD  83


>gi|337767175|emb|CCB75886.1| Predicted nucleic acid-binding protein, contains PIN domain [Streptomyces 
cattleya NRRL 8057]
Length=139

 Score =  127 bits (318),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 63/104 (61%), Positives = 76/104 (74%), Gaps = 1/104 (0%)

Query  20   RAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARA-GA  78
            R +GSC PQR EF RSARN   ++QM  MF D+YPDVP+PK++W WI+SAQ RLAR+ GA
Sbjct  31   RVIGSCAPQRTEFRRSARNLVHYEQMGEMFADLYPDVPLPKNMWGWIESAQFRLARSGGA  90

Query  79   VGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
            V ALS VDL+IC TAA  GL+VLHDD D+  A   L D+  R V
Sbjct  91   VRALSTVDLMICATAAYHGLIVLHDDNDFVTAAGVLTDVLQRSV  134


>gi|345015827|ref|YP_004818181.1| PilT protein domain-containing protein [Streptomyces violaceusniger 
Tu 4113]
 gi|344042176|gb|AEM87901.1| PilT protein domain protein [Streptomyces violaceusniger Tu 4113]
Length=138

 Score =  126 bits (316),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 61/104 (59%), Positives = 75/104 (73%), Gaps = 0/104 (0%)

Query  21   AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG  80
            A+GSC PQR EF +SAR  DE+D M+ MF D++PDV VPKS W+WI+  Q+RLA+ G   
Sbjct  32   AIGSCAPQRTEFRQSARGLDEYDGMTEMFADLFPDVSVPKSAWKWIEVGQYRLAQRGQHQ  91

Query  81   ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVS  124
            +LSVVD LIC TAA  GLVVLHDDAD+  A R L D+  R V +
Sbjct  92   SLSVVDWLICATAAHHGLVVLHDDADFRAAARLLSDLAERNVFA  135


>gi|291301559|ref|YP_003512837.1| PilT protein domain-containing protein [Stackebrandtia nassauensis 
DSM 44728]
 gi|290570779|gb|ADD43744.1| PilT protein domain protein [Stackebrandtia nassauensis DSM 44728]
Length=137

 Score =  123 bits (309),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 60/102 (59%), Positives = 72/102 (71%), Gaps = 0/102 (0%)

Query  21   AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG  80
            AVGSC+PQR EF RSAR+ DEFD MSRMF D+YPDV V KS W+W+DS Q+RL+  G   
Sbjct  32   AVGSCQPQRCEFKRSARDRDEFDAMSRMFEDLYPDVAVHKSAWKWMDSVQYRLSAKGKHR  91

Query  81   ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
             LSVVDL++  TAA  GL+VLHDD D+       PD+  R V
Sbjct  92   GLSVVDLVVAATAAYHGLIVLHDDNDFATVVTEAPDLSERNV  133


>gi|239990082|ref|ZP_04710746.1| hypothetical protein SrosN1_22440 [Streptomyces roseosporus NRRL 
11379]
 gi|291447096|ref|ZP_06586486.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 
15998]
 gi|291350043|gb|EFE76947.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 
15998]
Length=136

 Score =  115 bits (289),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 56/97 (58%), Positives = 66/97 (69%), Gaps = 0/97 (0%)

Query  21   AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG  80
            A+ SC PQRAEF   ARNA E+D++  MF D+YPDV VPKS  RWI S QHR+ARAG   
Sbjct  31   AIASCYPQRAEFLYGARNAREYDEIVEMFTDLYPDVSVPKSAGRWITSVQHRMARAGQHR  90

Query  81   ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDI  117
            + S VDL+I  TAA  GL VLHD  DY    R+ PD+
Sbjct  91   SASAVDLIIAATAAHHGLTVLHDGFDYRTVARYAPDL  127


>gi|302559520|ref|ZP_07311862.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302477138|gb|EFL40231.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=127

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 57/102 (56%), Positives = 68/102 (67%), Gaps = 0/102 (0%)

Query  21   AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG  80
            A+ SC  QRAEF  SARN  E+D+++ MF D+YPDV VPK+  RWI + QHR+ARAG   
Sbjct  22   AIASCYVQRAEFLHSARNGREYDEITEMFTDLYPDVSVPKNAGRWIGAMQHRMARAGEHR  81

Query  81   ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
            + S VDLLI  TAA  GL VLHDDADY    RH  D+    V
Sbjct  82   SASAVDLLIAATAAHHGLAVLHDDADYRAIARHASDLTEHNV  123


>gi|302552928|ref|ZP_07305270.1| conserved hypothetical protein [Streptomyces viridochromogenes 
DSM 40736]
 gi|302470546|gb|EFL33639.1| conserved hypothetical protein [Streptomyces viridochromogenes 
DSM 40736]
Length=136

 Score =  112 bits (281),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 54/97 (56%), Positives = 66/97 (69%), Gaps = 0/97 (0%)

Query  21   AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG  80
            A+ SC  QRAEF  SARN  E+D+++ MF D+YPD  VPK+  RWI S QHR+A+AG   
Sbjct  31   AIASCYVQRAEFLYSARNGREYDEIAEMFTDIYPDAAVPKNAGRWISSVQHRMAQAGEHR  90

Query  81   ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDI  117
            + S VDL+I  TAA  GL VLHDDADY    RH  D+
Sbjct  91   SASAVDLVIAATAAHHGLAVLHDDADYRAIARHASDL  127


>gi|294996175|ref|ZP_06801866.1| toxin [Mycobacterium tuberculosis 210]
Length=73

 Score =  103 bits (258),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 54/55 (99%), Positives = 54/55 (99%), Gaps = 0/55 (0%)

Query  73   LARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSADD  127
             ARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSADD
Sbjct  19   FARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSADD  73


>gi|290959463|ref|YP_003490645.1| hypothetical protein SCAB_50581 [Streptomyces scabiei 87.22]
 gi|260648989|emb|CBG72103.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=138

 Score = 92.8 bits (229),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 52/99 (53%), Positives = 59/99 (60%), Gaps = 0/99 (0%)

Query  24   SCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALS  83
            SC PQRAEF RSAR+  E++    MF D+Y DV VPK    WI   Q R A  G   ALS
Sbjct  35   SCYPQRAEFLRSARDLKEYEAYHAMFEDLYADVSVPKHAPHWIGGLQLRAAERGEHQALS  94

Query  84   VVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
             VDL IC TAA  GLVVLHDD D+  A R   ++R   V
Sbjct  95   AVDLQICATAAHHGLVVLHDDRDFVTAARLAVELRQLNV  133


>gi|328882585|emb|CCA55824.1| hypothetical protein SVEN_2538 [Streptomyces venezuelae ATCC 
10712]
Length=138

 Score = 82.8 bits (203),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 42/102 (42%), Positives = 58/102 (57%), Gaps = 0/102 (0%)

Query  21   AVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVG  80
            A+G CE  R E   SA NAD+ + +      ++  V VPK  WRW++SAQ++L + G   
Sbjct  32   AIGMCEATRTELLFSAVNADDREAIEEDLAAMFAPVRVPKDAWRWVESAQYKLTQKGQHR  91

Query  81   ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
            A  V+DLLIC TA   GL VLH D D+    R L ++  + V
Sbjct  92   AAGVIDLLICATAVHHGLTVLHRDNDFATVARVLKEVEQQDV  133


>gi|311897887|dbj|BAJ30295.1| hypothetical protein KSE_45120 [Kitasatospora setae KM-6054]
Length=135

 Score = 79.0 bits (193),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 45/115 (40%), Positives = 59/115 (52%), Gaps = 0/115 (0%)

Query  6    TTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRW  65
            T G  R  E   A   +  CEP RAEF  SA      D+++     +     VPKS WRW
Sbjct  17   TPGALRAWEGHIAAGVLHVCEPTRAEFLYSATGPAHRDELADELDALCGTAAVPKSAWRW  76

Query  66   IDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVR  120
            +DSAQ+RL + G   +   +DLL+C TAA   L VLH D D+      + D+R R
Sbjct  77   VDSAQYRLTQRGLHRSAGAIDLLVCATAAHHDLTVLHVDNDFTTVASVVSDVRER  131


>gi|294631521|ref|ZP_06710081.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. e14]
 gi|292834854|gb|EFF93203.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. e14]
Length=136

 Score = 76.6 bits (187),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 39/98 (40%), Positives = 54/98 (56%), Gaps = 0/98 (0%)

Query  25   CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV  84
            CEP R EF  SA      D ++     +     VPKS WRW+D+AQ++L + G   +   
Sbjct  36   CEPTRTEFLYSATGPAHRDDLAGELDTLCALAAVPKSAWRWVDTAQYKLTQKGQHRSAGA  95

Query  85   VDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
            +DLL+C TAA   L VLH D D+    R LP++R + V
Sbjct  96   IDLLVCATAAHHDLTVLHLDDDFGTVARVLPELREQNV  133


>gi|29832237|ref|NP_826871.1| hypothetical protein SAV_5694 [Streptomyces avermitilis MA-4680]
 gi|29609355|dbj|BAC73406.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=135

 Score = 75.5 bits (184),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 38/98 (39%), Positives = 55/98 (57%), Gaps = 0/98 (0%)

Query  25   CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV  84
            CEP RAEF  SA +    D+++     +    PVPK+ WRW+D+AQ++L + G   A   
Sbjct  36   CEPTRAEFLYSATSPTHRDELAEELDALCLLSPVPKNAWRWVDTAQYKLTQQGQHRAAGA  95

Query  85   VDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
            +DLL+C TA   G  VLH D D+      L +++ R V
Sbjct  96   IDLLVCATAVHHGHTVLHVDNDFATVAGVLKELQQRDV  133


>gi|297193814|ref|ZP_06911212.1| conserved hypothetical protein [Streptomyces pristinaespiralis 
ATCC 25486]
 gi|197721228|gb|EDY65136.1| conserved hypothetical protein [Streptomyces pristinaespiralis 
ATCC 25486]
Length=140

 Score = 73.9 bits (180),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 34/83 (41%), Positives = 47/83 (57%), Gaps = 0/83 (0%)

Query  25   CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV  84
            CEP +AEF  SA      D +     D++P   VP   W W+D+AQ++L + G   +   
Sbjct  37   CEPTKAEFLHSATGPAHRDDLETRLHDMFPAARVPGGAWSWVDTAQYKLTQKGQHRSAGP  96

Query  85   VDLLICDTAAARGLVVLHDDADY  107
            +DLL+C TA   GLVVLH D D+
Sbjct  97   LDLLLCATAVHHGLVVLHRDNDF  119


>gi|330466883|ref|YP_004404626.1| PilT protein domain-containing protein [Verrucosispora maris 
AB-18-032]
 gi|328809854|gb|AEB44026.1| PilT protein domain-containing protein [Verrucosispora maris 
AB-18-032]
Length=131

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 40/106 (38%), Positives = 58/106 (55%), Gaps = 1/106 (0%)

Query  17   AAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARA  76
            AA+  +G C+P   E    A +A  +D++ R   D+YP VPVP   W+ + + +  LA  
Sbjct  26   AARGLIGICDPVLVETLTIA-DAKAYDRVERGLRDLYPWVPVPDDAWQVVRAVRQELASH  84

Query  77   GAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
             A   LSV D L+  TA    LVVLH +AD+E A R +P +   R+
Sbjct  85   NAHQGLSVADHLVAATAIRLKLVVLHQNADFETAARLVPQLSQERI  130


>gi|290960653|ref|YP_003491835.1| hypothetical protein SCAB_62781 [Streptomyces scabiei 87.22]
 gi|260650179|emb|CBG73295.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=138

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 28/66 (43%), Positives = 40/66 (61%), Gaps = 0/66 (0%)

Query  57   PVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPD  116
            PVPK+ WRW+++AQ++L + G   A  V+DLL+C TA   G  VLH D D+      L +
Sbjct  71   PVPKNAWRWVETAQYKLTQQGQHQAAGVIDLLVCATAVHYGHTVLHVDNDFPTVAGVLKE  130

Query  117  IRVRRV  122
            +  R V
Sbjct  131  VEQRDV  136


>gi|294629213|ref|ZP_06707773.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. e14]
 gi|292832546|gb|EFF90895.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. e14]
Length=135

 Score = 53.9 bits (128),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 34/104 (33%), Positives = 49/104 (48%), Gaps = 1/104 (0%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA  81
            VG CEP R EF R+      + +   +  + +P  P+    W      Q  LA  G    
Sbjct  33   VGLCEPVRQEFLRAVGGRPSYYEADTLLRETFPYCPMRDFAWEDAAELQQALADRGWHQC  92

Query  82   LSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRVVSA  125
             S VDLL+  TA    + VLH+DAD+E   R +    VRR+++ 
Sbjct  93   ASPVDLLVAVTAGHHKMTVLHEDADFETIAR-VTGQPVRRILAG  135


>gi|256396515|ref|YP_003118079.1| hypothetical protein Caci_7412 [Catenulispora acidiphila DSM 
44928]
 gi|256362741|gb|ACU76238.1| conserved hypothetical protein [Catenulispora acidiphila DSM 
44928]
Length=85

 Score = 50.8 bits (120),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 27/67 (41%), Positives = 36/67 (54%), Gaps = 5/67 (7%)

Query  57   PVPKSVWRWIDSAQHRLA-----RAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAE  111
            PVPK  WRW+D+AQ++L      R         +DLL+  TA   GL VLH D D+    
Sbjct  13   PVPKDAWRWVDTAQYKLTLKSQHRKSQHRGPGPIDLLVAATAVHHGLTVLHVDNDFVTIA  72

Query  112  RHLPDIR  118
              LP++R
Sbjct  73   FVLPELR  79


>gi|240172880|ref|ZP_04751539.1| hypothetical protein MkanA1_26442 [Mycobacterium kansasii ATCC 
12478]
Length=140

 Score = 50.8 bits (120),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 32/94 (35%), Positives = 47/94 (50%), Gaps = 0/94 (0%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA  81
            V +     AE   SARN  +++Q+       Y  +P     W+    AQ +LA  G   A
Sbjct  35   VATTAQLDAEALYSARNPADYEQLWSDRRAAYEYLPTNDEHWQTALGAQRKLASTGRHRA  94

Query  82   LSVVDLLICDTAAARGLVVLHDDADYELAERHLP  115
            + + DLLI   AAA  + ++H DAD+E+A   LP
Sbjct  95   VGMADLLIATLAAAHDMTLIHYDADFEIAAEVLP  128


>gi|333992736|ref|YP_004525350.1| hypothetical protein JDM601_4096 [Mycobacterium sp. JDM601]
 gi|333488704|gb|AEF38096.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=131

 Score = 48.9 bits (115),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 33/102 (33%), Positives = 47/102 (47%), Gaps = 1/102 (0%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARA-GAVG  80
            V  CE    E+  SAR+  ++D  S    D YP +P P  ++  +   Q  LA   G   
Sbjct  29   VALCEMSELEWLYSARSGADYDSQSAAVRDAYPVLPAPADIFDRVRRLQRDLAHHRGMWH  88

Query  81   ALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
               + DL I +TA   G  VLH D DY+   +   D +VR +
Sbjct  89   RTPLPDLFIAETALHHGAGVLHRDRDYQRIRKVRSDFQVREL  130


>gi|294629978|ref|ZP_06708538.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. e14]
 gi|292833311|gb|EFF91660.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. e14]
Length=134

 Score = 48.5 bits (114),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 32/106 (31%), Positives = 47/106 (45%), Gaps = 0/106 (0%)

Query  16   RAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLAR  75
            RAA+  +  C P  AE     R+  +++    +    +  VP P   W+ +   Q  LAR
Sbjct  25   RAARGLLAICPPVEAELMPGLRSDRDYEPFFTVLSQTFGRVPAPDDPWQKVLGVQRDLAR  84

Query  76   AGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRR  121
             G     S +D+LI  TA    L VLH D D+    +  P I + R
Sbjct  85   IGHHRGPSPMDILIALTAEHHHLTVLHVDDDFAAIAKVRPGIAMVR  130


>gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces sp. C]
 gi|302443399|gb|EFL15215.1| predicted protein [Streptomyces sp. C]
Length=140

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 28/91 (31%), Positives = 46/91 (51%), Gaps = 0/91 (0%)

Query  18   AQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAG  77
            A+  +G CE    E   SA++  +  +   + G+++   PVP+SV+    + Q  L   G
Sbjct  31   AEGVIGICEVTELEILFSAKSLADRLEKEALLGELFNWTPVPESVYVRARAVQRLLTGRG  90

Query  78   AVGALSVVDLLICDTAAARGLVVLHDDADYE  108
               +   VDLL+  TA   GL +LH D D++
Sbjct  91   EHRSAGPVDLLVAATAELTGLTLLHYDKDFD  121


>gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
hygroscopicus ATCC 53653]
 gi|302462202|gb|EFL25295.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
himastatinicus ATCC 53653]
Length=138

 Score = 47.0 bits (110),  Expect = 9e-04, Method: Compositional matrix adjust.
 Identities = 30/78 (39%), Positives = 38/78 (49%), Gaps = 1/78 (1%)

Query  31   EFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLIC  90
            E   SARNA+E D++ R     +  +P P  VW      Q +    G   A S+ DLLI 
Sbjct  42   EILYSARNANEADRLGRWLTG-FDYLPCPDEVWDAALDIQRQAIAKGNHRAFSMADLLIA  100

Query  91   DTAAARGLVVLHDDADYE  108
             TA   G  VLH D DY+
Sbjct  101  ATAQRHGATVLHYDGDYD  118


>gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294814925|ref|ZP_06773568.1| toxin [Streptomyces clavuligerus ATCC 27064]
 gi|326443296|ref|ZP_08218030.1| PilT protein domain-containing protein [Streptomyces clavuligerus 
ATCC 27064]
 gi|197702707|gb|EDY48519.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294327524|gb|EFG09167.1| toxin [Streptomyces clavuligerus ATCC 27064]
Length=139

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 37/110 (34%), Positives = 50/110 (46%), Gaps = 5/110 (4%)

Query  2    AAATTTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFG--DVYPDVPVP  59
            A A   G    LE +  +  VG+      E   SARNAD+++   RM G    +   P  
Sbjct  14   ARAGKPGVRAALEPKLLRGLVGTSGIIDLELLFSARNADDYE---RMLGRRQAFEWFPTT  70

Query  60   KSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYEL  109
              +       Q   AR G   ALS+ DLL+  TA   GL +LH D D++L
Sbjct  71   DEIVARAIEVQGFCARKGNHRALSIPDLLVAATAERHGLTLLHYDGDFDL  120


>gi|295840079|ref|ZP_06827012.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. SPB74]
 gi|197697029|gb|EDY43962.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. SPB74]
Length=139

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 32/101 (32%), Positives = 45/101 (45%), Gaps = 0/101 (0%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA  81
            VG   P   E C SA+ A + D++ +  G ++  V    + +      Q  L + GA  +
Sbjct  33   VGIIPPIEFEICYSAQKARDRDELLQKLGLLFSAVTPTPAAYDAGRDMQEALTKHGAHRS  92

Query  82   LSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
               VDLL+  TA    L VLH D DY    R  P  R  R+
Sbjct  93   CGPVDLLLAGTAHVESLTVLHVDKDYVTLARLWPSFRQVRL  133


>gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302475573|gb|EFL38666.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=136

 Score = 44.7 bits (104),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 30/78 (39%), Positives = 38/78 (49%), Gaps = 1/78 (1%)

Query  31   EFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLIC  90
            E   SARN  E  ++ R +   +  +P P   W      Q +  R G   ALS+ DLLI 
Sbjct  40   EILYSARNPAEAGKL-RYWLAGFDYLPCPDECWDRAKDVQAQATRTGNHRALSMADLLIA  98

Query  91   DTAAARGLVVLHDDADYE  108
             TA   G+ VLH D DYE
Sbjct  99   ATAERHGVRVLHYDEDYE  116


>gi|256389742|ref|YP_003111306.1| hypothetical protein Caci_0521 [Catenulispora acidiphila DSM 
44928]
 gi|256355968|gb|ACU69465.1| hypothetical protein Caci_0521 [Catenulispora acidiphila DSM 
44928]
Length=92

 Score = 43.1 bits (100),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 23/78 (30%), Positives = 39/78 (50%), Gaps = 0/78 (0%)

Query  45   MSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVDLLICDTAAARGLVVLHDD  104
            +S +   ++  VP P   W+ +   QH L + G       +D+L+  TA    L VLH D
Sbjct  14   VSTLLNSLFGWVPCPDDPWQQVIGIQHDLIKIGHDRGPGAIDILVALTAVQHRLTVLHLD  73

Query  105  ADYELAERHLPDIRVRRV  122
             D+    +  PDI+V+++
Sbjct  74   NDFAAIAKVRPDIQVQQL  91


>gi|345013748|ref|YP_004816102.1| PilT protein domain-containing protein [Streptomyces violaceusniger 
Tu 4113]
 gi|344040097|gb|AEM85822.1| PilT protein domain protein [Streptomyces violaceusniger Tu 4113]
Length=139

 Score = 43.1 bits (100),  Expect = 0.015, Method: Compositional matrix adjust.
 Identities = 28/85 (33%), Positives = 40/85 (48%), Gaps = 1/85 (1%)

Query  25   CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV  84
            C P   E   SARN ++  ++   F   +  +P+P  VW      Q +    G   ALS+
Sbjct  36   CGPVEMEVMYSARNDNDAKRL-HWFLSGFDYLPMPDEVWDRAKDIQRQAITKGNHRALSM  94

Query  85   VDLLICDTAAARGLVVLHDDADYEL  109
             DLLI   A    + VLH D DY++
Sbjct  95   PDLLIAAAAERHAVTVLHYDQDYDM  119


>gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_14659 [Streptomyces roseosporus NRRL 
11379]
 gi|291445528|ref|ZP_06584918.1| PilT protein domain-containing protein [Streptomyces roseosporus 
NRRL 15998]
 gi|291348475|gb|EFE75379.1| PilT protein domain-containing protein [Streptomyces roseosporus 
NRRL 15998]
Length=135

 Score = 42.7 bits (99),  Expect = 0.016, Method: Compositional matrix adjust.
 Identities = 28/91 (31%), Positives = 43/91 (48%), Gaps = 1/91 (1%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA  81
            V  C+    E   SAR+ ++ +++      +Y   P+P  V+R   + Q +L   G    
Sbjct  34   VALCDLTELELLYSARSTEDREKVRERLA-LYTWCPMPDGVFRRARTVQDQLTAKGEHRN  92

Query  82   LSVVDLLICDTAAARGLVVLHDDADYELAER  112
               VDLL+  TA   GL +LH D D+E   R
Sbjct  93   AGPVDLLLAATAEQSGLTLLHYDRDFETIAR  123


>gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302444994|gb|EFL16810.1| conserved hypothetical protein [Streptomyces sp. C]
Length=138

 Score = 42.4 bits (98),  Expect = 0.025, Method: Compositional matrix adjust.
 Identities = 29/88 (33%), Positives = 42/88 (48%), Gaps = 1/88 (1%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA  81
            +G C     E   SAR+  + D++    G  +  +  P  VW      Q +L  AG   A
Sbjct  33   LGVCGAVELEVLYSARSKGDADRVRAGLG-AFAWLSTPDEVWDRALDVQKQLIVAGNWKA  91

Query  82   LSVVDLLICDTAAARGLVVLHDDADYEL  109
            +S+ DL+I  TA   G  VLH D DY++
Sbjct  92   VSLPDLVIAATAERHGATVLHYDGDYDM  119


>gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291355304|gb|EFE82206.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=135

 Score = 42.0 bits (97),  Expect = 0.030, Method: Compositional matrix adjust.
 Identities = 31/102 (31%), Positives = 44/102 (44%), Gaps = 1/102 (0%)

Query  11   RGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQ  70
            R  E R     V  C+    E   SAR+  + D +      ++   P+P  V+R   + Q
Sbjct  23   REWEHRIGAGLVSLCDLTELELLYSARSTSDRDAIRDRLS-LFTWCPMPDGVFRRARTVQ  81

Query  71   HRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAER  112
              L   G   +   VDLL+  TA   GL +LH D D+E   R
Sbjct  82   ALLTDKGEHRSAGAVDLLLAATAEQSGLTLLHHDRDFETVAR  123


>gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kitasatospora setae KM-6054]
Length=139

 Score = 41.2 bits (95),  Expect = 0.045, Method: Compositional matrix adjust.
 Identities = 30/93 (33%), Positives = 44/93 (48%), Gaps = 2/93 (2%)

Query  18   AQRAVGSCEPQ-RAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARA  76
            +QRA+ +  P    E   SAR   E +++  +    +  +  P  VW      Q +    
Sbjct  29   SQRALLAISPTVEMEVLYSARTLAEAERLRHLLRG-FDYLSCPDEVWDRAKQVQQQALFR  87

Query  77   GAVGALSVVDLLICDTAAARGLVVLHDDADYEL  109
            G   ALS+ DLLI  TA   G+ VLH D DY++
Sbjct  88   GNHRALSMADLLIAATAERHGVTVLHYDGDYDM  120


>gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Streptomyces bingchenggensis 
BCW-1]
Length=138

 Score = 41.2 bits (95),  Expect = 0.056, Method: Compositional matrix adjust.
 Identities = 29/86 (34%), Positives = 42/86 (49%), Gaps = 3/86 (3%)

Query  25   CEPQRAEFCRSARNADEFDQM-SRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALS  83
            C     E   SAR+  + +++   M G  +  +P P   W      Q +L  AG   ALS
Sbjct  36   CGAVELEVLHSARSKGDAERIRDEMRG--FDWLPTPDEAWDRALEVQTQLIAAGNWKALS  93

Query  84   VVDLLICDTAAARGLVVLHDDADYEL  109
            V DL+I  TA    ++VLH D DY++
Sbjct  94   VSDLVIAATAERHSVIVLHYDGDYDM  119


>gi|328947662|ref|YP_004364999.1| PilT protein domain protein [Treponema succinifaciens DSM 2489]
 gi|328447986|gb|AEB13702.1| PilT protein domain protein [Treponema succinifaciens DSM 2489]
Length=133

 Score = 40.8 bits (94),  Expect = 0.064, Method: Compositional matrix adjust.
 Identities = 29/115 (26%), Positives = 52/115 (46%), Gaps = 2/115 (1%)

Query  6    TTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRW  65
            T GT     L + ++     E    E  + ++N  EF  +    G++ P   +   +  +
Sbjct  18   TAGTRYLEALISEEKPFCINEFIYQELLQGSKNEKEFSTLKSYLGEI-PLYSLKLGIQSY  76

Query  66   IDSAQHRLA-RAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRV  119
             ++A   L  R   V   S VDLLI +TA    + +LHDD D+    R + ++++
Sbjct  77   ENAAILNLKCRRKGVTIRSTVDLLIAETAIENNIPLLHDDEDFVNMARVITELKL  131


>gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197710357|gb|EDY54391.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=139

 Score = 40.8 bits (94),  Expect = 0.065, Method: Compositional matrix adjust.
 Identities = 28/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVP-KSVWRWIDSAQHRLARAGAVG  80
            +  C     EF  SARNA++  ++ +    ++   P+  ++V R  D  Q  L   G   
Sbjct  34   ISRCPMTEVEFLYSARNAEDRSELVQDLDALFGWTPLDDRAVSRAWD-VQRELTEKGQHR  92

Query  81   ALSVVDLLICDTAAARGLVVLHDDADYE  108
            +   VDLL+  TA  +GL +LH D D+E
Sbjct  93   SAGAVDLLVAATAELQGLTMLHYDNDFE  120


>gi|88602729|ref|YP_502907.1| PilT protein-like protein [Methanospirillum hungatei JF-1]
 gi|88188191|gb|ABD41188.1| PilT protein-like protein [Methanospirillum hungatei JF-1]
Length=139

 Score = 40.0 bits (92),  Expect = 0.11, Method: Compositional matrix adjust.
 Identities = 23/89 (26%), Positives = 39/89 (44%), Gaps = 3/89 (3%)

Query  27   PQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSVVD  86
            P R E      +A +F+++       YPD+P+   ++       +   +AG  G+L+  D
Sbjct  45   PIRQELLSGISSAAQFEKLKNHLSH-YPDMPLKIEIYEKAAKYFNICRKAGVQGSLT--D  101

Query  87   LLICDTAAARGLVVLHDDADYELAERHLP  115
             LIC  A    L +   D D+     H+P
Sbjct  102  FLICAVATEADLKIYTLDKDFSYYANHIP  130


>gi|336120115|ref|YP_004574893.1| hypothetical protein MLP_44760 [Microlunatus phosphovorus NM-1]
 gi|334687905|dbj|BAK37490.1| hypothetical protein MLP_44760 [Microlunatus phosphovorus NM-1]
Length=132

 Score = 40.0 bits (92),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 30/104 (29%), Positives = 53/104 (51%), Gaps = 11/104 (10%)

Query  25   CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWI-----DSAQHR-LARAGA  78
            CE    E+  SAR+A ++D       +++  V  P +++  +     D A HR +    A
Sbjct  34   CEMGLLEWLYSARSALDYDTQHTELREMFHIVEAPANIFDRVLQLQADLAHHRSMWHRRA  93

Query  79   VGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRVRRV  122
            +G     DL I +TA A    VLH D+D+EL ++  P++ ++ +
Sbjct  94   LG-----DLFIAETALAHQAGVLHADSDFELIQQVRPNLLLKSL  132


>gi|257456425|ref|ZP_05621621.1| PIN domain protein [Treponema vincentii ATCC 35580]
 gi|257446085|gb|EEV21132.1| PIN domain protein [Treponema vincentii ATCC 35580]
Length=133

 Score = 39.7 bits (91),  Expect = 0.15, Method: Compositional matrix adjust.
 Identities = 32/116 (28%), Positives = 54/116 (47%), Gaps = 4/116 (3%)

Query  6    TTGTHRGLELRAAQRAVGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRW  65
            T GT    +L  AQ+     E    E  + +++  EF  +     DV P   + + +  +
Sbjct  18   TVGTAYFEKLLEAQKHFCINEFIYQELLQGSKDEKEFAVLKSYLMDV-PLYSLKRGIQSF  76

Query  66   IDSA--QHRLARAGAVGALSVVDLLICDTAAARGLVVLHDDADYELAERHLPDIRV  119
             ++A    R  R G V   S VDLLI +TA    + +LHDD D+    R + ++++
Sbjct  77   ENAALLNFRCRRKG-VTIRSTVDLLIAETAIENNIPLLHDDDDFTNMARIITELKL  131


>gi|325970524|ref|YP_004246715.1| PilT protein domain protein [Spirochaeta sp. Buddy]
 gi|324025762|gb|ADY12521.1| PilT protein domain protein [Spirochaeta sp. Buddy]
Length=130

 Score = 39.3 bits (90),  Expect = 0.19, Method: Compositional matrix adjust.
 Identities = 31/94 (33%), Positives = 47/94 (50%), Gaps = 6/94 (6%)

Query  30   AEFCRSARNADEFDQMSRMFGDV-YPDVPVPKSVWRWIDSAQH-RLARAGAVGALSVVDL  87
             EF +  R+  +F Q  R+   + Y D  + K +   I +AQ+ RL R   V     +D+
Sbjct  41   VEFLQGFRDNKQFQQARRLMDSLEYYDF-IGKDMA--IKAAQNFRLLRKKGVTIHKTIDV  97

Query  88   LICDTAAARGLVVLHDDADYELAERHLPDIRVRR  121
            LI       G  +LH+D +YE  E+ L  +RVRR
Sbjct  98   LIATFCIEHGFGLLHNDKEYEQMEKILG-LRVRR  130


>gi|323358653|ref|YP_004225049.1| nucleic acid-binding protein [Microbacterium testaceum StLB037]
 gi|323275024|dbj|BAJ75169.1| predicted nucleic acid-binding protein [Microbacterium testaceum 
StLB037]
Length=137

 Score = 38.5 bits (88),  Expect = 0.38, Method: Compositional matrix adjust.
 Identities = 30/86 (35%), Positives = 40/86 (47%), Gaps = 4/86 (4%)

Query  24   SCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVP-KSVWRWIDSAQHRLARAGAVGAL  82
            +C PQ  EFC SAR+ +E           +P    P +S+   I SA   L  AG V A 
Sbjct  38   TCPPQVLEFCHSARSPEEHAHYLEQISLGFPLERAPDESLAVGIQSA---LWNAGLVRAA  94

Query  83   SVVDLLICDTAAARGLVVLHDDADYE  108
              VD+LI   A A    +L  D D++
Sbjct  95   GAVDILIAAYAIANDATILSADHDFD  120


>gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Streptomyces bingchenggensis 
BCW-1]
Length=139

 Score = 38.1 bits (87),  Expect = 0.42, Method: Compositional matrix adjust.
 Identities = 26/85 (31%), Positives = 38/85 (45%), Gaps = 1/85 (1%)

Query  25   CEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGALSV  84
            C P   E   SARN ++  ++       +  +P+   VW      Q +    G   ALS+
Sbjct  36   CGPVEIEVMYSARNENDAKRLHWFLAG-FDYLPMTDEVWDRAKDVQRQAIAKGNHRALSM  94

Query  85   VDLLICDTAAARGLVVLHDDADYEL  109
             DLLI   A    + VLH D DY++
Sbjct  95   PDLLIAAAAERHVVTVLHYDQDYDM  119


>gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
hygroscopicus ATCC 53653]
 gi|302464447|gb|EFL27540.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
himastatinicus ATCC 53653]
Length=140

 Score = 38.1 bits (87),  Expect = 0.44, Method: Compositional matrix adjust.
 Identities = 27/87 (32%), Positives = 33/87 (38%), Gaps = 0/87 (0%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA  81
            V  CE    E  R+    DE   + R   D +   PVP          Q  L        
Sbjct  34   VAVCEITELELVRATGGRDERAVLERYLHDAFGWTPVPDRALTRARQVQDLLVATSWHQG  93

Query  82   LSVVDLLICDTAAARGLVVLHDDADYE  108
               VDL+   TA   GL +LH DAD+E
Sbjct  94   PGAVDLMTAATAELCGLTLLHYDADFE  120


>gi|302869194|ref|YP_003837831.1| PilT protein domain-containing protein [Micromonospora aurantiaca 
ATCC 27029]
 gi|302572053|gb|ADL48255.1| PilT protein domain protein [Micromonospora aurantiaca ATCC 27029]
Length=139

 Score = 37.4 bits (85),  Expect = 0.66, Method: Compositional matrix adjust.
 Identities = 28/87 (33%), Positives = 41/87 (48%), Gaps = 4/87 (4%)

Query  23   GSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGAL  82
            G+ E +     RSA++A     + R F  +     +P  +W      Q +    G   AL
Sbjct  38   GAIEIEVIHSARSAKDAKRARWLLRGFDWL----AMPDDIWDRAIDIQVQTLHKGNHRAL  93

Query  83   SVVDLLICDTAAARGLVVLHDDADYEL  109
            S+ DLLI  TA   G+ VLH D D++L
Sbjct  94   SMADLLIAATAERHGVTVLHYDGDFDL  120


>gi|315504329|ref|YP_004083216.1| pilt protein domain-containing protein [Micromonospora sp. L5]
 gi|315410948|gb|ADU09065.1| PilT protein domain protein [Micromonospora sp. L5]
Length=139

 Score = 37.4 bits (85),  Expect = 0.68, Method: Compositional matrix adjust.
 Identities = 28/87 (33%), Positives = 41/87 (48%), Gaps = 4/87 (4%)

Query  23   GSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGAL  82
            G+ E +     RSA++A     + R F  +     +P  +W      Q +    G   AL
Sbjct  38   GAIEIEVVHSARSAKDAKRARWLLRGFDWL----AMPDDIWDRAIDIQVQALHKGNHRAL  93

Query  83   SVVDLLICDTAAARGLVVLHDDADYEL  109
            S+ DLLI  TA   G+ VLH D D++L
Sbjct  94   SMADLLIAATAERHGVTVLHYDGDFDL  120


>gi|158318849|ref|YP_001511357.1| PilT domain-containing protein [Frankia sp. EAN1pec]
 gi|158114254|gb|ABW16451.1| PilT protein domain protein [Frankia sp. EAN1pec]
Length=159

 Score = 37.4 bits (85),  Expect = 0.84, Method: Compositional matrix adjust.
 Identities = 33/82 (41%), Positives = 40/82 (49%), Gaps = 5/82 (6%)

Query  31   EFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSA---QHRLARAGAVGALSVVDL  87
            E   SAR+A   D   R+   +   +PV  +  R    A   Q  LA  G   A SV DL
Sbjct  65   EVGFSARSAQ--DLRVRLRRSLVSAMPVENTTPRIEARAVEIQELLASTGHHRAPSVPDL  122

Query  88   LICDTAAARGLVVLHDDADYEL  109
            +I  TA   GLVVLH D D+EL
Sbjct  123  IIAATAELAGLVVLHVDKDFEL  144


>gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841 [Mycobacterium canettii CIPT 
140010059]
 gi|340005948|emb|CCC45115.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=138

 Score = 36.2 bits (82),  Expect = 1.7, Method: Compositional matrix adjust.
 Identities = 24/87 (28%), Positives = 37/87 (43%), Gaps = 0/87 (0%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA  81
            +  C     EF  SAR+ ++   +     D    V  P +VW      Q  L   G   +
Sbjct  33   LARCGITDLEFGVSARSREDHRTLGTYRRDALEYVNTPDTVWDRAWEIQEALTDKGFHRS  92

Query  82   LSVVDLLICDTAAARGLVVLHDDADYE  108
            + + DL+I   A   G+ V+H D D+E
Sbjct  93   VKIPDLIIAAVAEHHGIPVMHYDQDFE  119


>gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycobacterium tuberculosis H37Rv]
 gi|15842295|ref|NP_337332.1| hypothetical protein MT2827 [Mycobacterium tuberculosis CDC1551]
 gi|31793931|ref|NP_856424.1| hypothetical protein Mb2778c [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=138

 Score = 36.2 bits (82),  Expect = 1.9, Method: Compositional matrix adjust.
 Identities = 24/87 (28%), Positives = 37/87 (43%), Gaps = 0/87 (0%)

Query  22   VGSCEPQRAEFCRSARNADEFDQMSRMFGDVYPDVPVPKSVWRWIDSAQHRLARAGAVGA  81
            +  C     EF  SAR+ ++   +     D    V  P +VW      Q  L   G   +
Sbjct  33   LARCGITDLEFGVSARSREDHRTLGTYRRDALEYVNTPDTVWVRAWEIQEALTDKGFHRS  92

Query  82   LSVVDLLICDTAAARGLVVLHDDADYE  108
            + + DL+I   A   G+ V+H D D+E
Sbjct  93   VKIPDLIIAAVAEHHGIPVMHYDQDFE  119



Lambda     K      H
   0.322    0.134    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 129319095676




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40