BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0657c
Length=51
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607797|ref|NP_215171.1| hypothetical protein Rv0657c [Mycob... 98.6 3e-19
gi|340625676|ref|YP_004744128.1| hypothetical protein MCAN_06561... 97.4 7e-19
gi|333988910|ref|YP_004521524.1| hypothetical protein JDM601_027... 92.4 2e-17
gi|29832236|ref|NP_826870.1| hypothetical protein SAV_5693 [Stre... 63.5 1e-08
gi|311897888|dbj|BAJ30296.1| hypothetical protein KSE_45130 [Kit... 57.4 7e-07
gi|345015828|ref|YP_004818182.1| hypothetical protein Strvi_8594... 57.4 8e-07
gi|291301560|ref|YP_003512838.1| hypothetical protein Snas_4094 ... 55.1 3e-06
gi|297193815|ref|ZP_06911213.1| conserved hypothetical protein [... 52.0 3e-05
gi|258654622|ref|YP_003203778.1| hypothetical protein Namu_4510 ... 50.4 1e-04
gi|302552927|ref|ZP_07305269.1| predicted protein [Streptomyces ... 48.5 3e-04
gi|302559521|ref|ZP_07311863.1| hypothetical protein SSRG_03036 ... 48.1 5e-04
gi|239990083|ref|ZP_04710747.1| hypothetical protein SrosN1_2244... 47.0 0.001
gi|312115922|ref|YP_004013518.1| hypothetical protein Rvan_3224 ... 45.1 0.003
gi|337767174|emb|CCB75885.1| conserved protein of unknown functi... 44.3 0.007
gi|254391932|ref|ZP_05007125.1| hypothetical protein SSCG_04582 ... 43.1 0.014
gi|326440327|ref|ZP_08215061.1| hypothetical protein SclaA2_0464... 43.1 0.015
gi|182434983|ref|YP_001822702.1| hypothetical protein SGR_1190 [... 42.4 0.027
gi|146296531|ref|YP_001180302.1| hypothetical protein Csac_1518 ... 41.2 0.059
gi|222528692|ref|YP_002572574.1| hypothetical protein Athe_0684 ... 40.8 0.075
gi|302871298|ref|YP_003839934.1| hypothetical protein COB47_0632... 40.0 0.11
gi|88811565|ref|ZP_01126819.1| hypothetical protein NB231_04150 ... 40.0 0.12
gi|312793700|ref|YP_004026623.1| hypothetical protein Calkr_1511... 39.7 0.15
gi|313672675|ref|YP_004050786.1| hypothetical protein Calni_0712... 39.3 0.20
gi|294631520|ref|ZP_06710080.1| conserved hypothetical protein [... 38.9 0.25
gi|326332642|ref|ZP_08198910.1| hypothetical protein NBCG_04086 ... 38.9 0.25
gi|326390063|ref|ZP_08211625.1| Protein of unknown function DUF2... 38.9 0.28
gi|159184572|ref|NP_354029.2| hypothetical protein Atu1005 [Agro... 38.5 0.32
gi|239991868|ref|ZP_04712532.1| hypothetical protein SrosN1_3150... 38.5 0.36
gi|304318060|ref|YP_003853205.1| hypothetical protein Tthe_2672 ... 38.1 0.40
gi|297154825|gb|ADI04537.1| hypothetical protein SBI_01416 [Stre... 38.1 0.46
gi|77165011|ref|YP_343536.1| hypothetical protein Noc_1521 [Nitr... 38.1 0.47
gi|91789944|ref|YP_550896.1| hypothetical protein Bpro_4105 [Pol... 38.1 0.50
gi|343479041|gb|AEM44210.1| hypothetical protein [uncultured bac... 37.7 0.63
gi|345013747|ref|YP_004816101.1| hypothetical protein Strvi_6366... 37.7 0.65
gi|297190915|ref|ZP_06908313.1| conserved hypothetical protein [... 37.4 0.78
gi|290958508|ref|YP_003489690.1| hypothetical protein SCAB_40671... 37.0 0.90
gi|284990201|ref|YP_003408755.1| hypothetical protein Gobs_1668 ... 37.0 0.91
gi|284038009|ref|YP_003387939.1| hypothetical protein Slin_3129 ... 36.6 1.4
gi|258592452|emb|CBE68761.1| conserved protein of unknown functi... 36.2 1.5
gi|333989208|ref|YP_004521822.1| hypothetical protein JDM601_056... 36.2 1.6
gi|327190277|gb|EGE57377.1| hypothetical protein RHECNPAF_439009... 36.2 1.8
gi|297545463|ref|YP_003677765.1| hypothetical protein Tmath_2080... 35.8 2.0
gi|289761723|ref|ZP_06521101.1| conserved hypothetical protein [... 35.8 2.0
gi|289579313|ref|YP_003477940.1| hypothetical protein Thit_2161 ... 35.8 2.1
gi|15608698|ref|NP_216076.1| hypothetical protein Rv1560 [Mycoba... 35.8 2.1
gi|167967386|ref|ZP_02549663.1| hypothetical protein MtubH3_0485... 35.8 2.4
gi|172034926|ref|YP_001801427.1| hypothetical protein cce_0009 [... 35.4 2.9
gi|328886335|emb|CCA59574.1| hypothetical protein SVEN_6288 [Str... 35.4 3.0
gi|335034130|ref|ZP_08527491.1| hypothetical protein AGRO_1470 [... 35.4 3.2
gi|290959459|ref|YP_003490641.1| hypothetical protein SCAB_50541... 35.4 3.2
>gi|15607797|ref|NP_215171.1| hypothetical protein Rv0657c [Mycobacterium tuberculosis H37Rv]
gi|15840060|ref|NP_335097.1| hypothetical protein MT0686 [Mycobacterium tuberculosis CDC1551]
gi|31791841|ref|NP_854334.1| hypothetical protein Mb0676c [Mycobacterium bovis AF2122/97]
73 more sequence titles
Length=51
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/51 (99%), Positives = 51/51 (100%), Gaps = 0/51 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
+SVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE
Sbjct 1 MSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
>gi|340625676|ref|YP_004744128.1| hypothetical protein MCAN_06561 [Mycobacterium canettii CIPT
140010059]
gi|340003866|emb|CCC42996.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=52
Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/51 (97%), Positives = 51/51 (100%), Gaps = 0/51 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
+SVTQIDLDDEALA+VMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE
Sbjct 1 MSVTQIDLDDEALAEVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
>gi|333988910|ref|YP_004521524.1| hypothetical protein JDM601_0270 [Mycobacterium sp. JDM601]
gi|333484878|gb|AEF34270.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=72
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/51 (91%), Positives = 49/51 (97%), Gaps = 0/51 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
++VTQIDLDDEAL +VMRIA VHTKKEAVNLAMRDYVERFRRIEALARSRE
Sbjct 1 MAVTQIDLDDEALREVMRIAGVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
>gi|29832236|ref|NP_826870.1| hypothetical protein SAV_5693 [Streptomyces avermitilis MA-4680]
gi|29609354|dbj|BAC73405.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=77
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/45 (67%), Positives = 37/45 (83%), Gaps = 0/45 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEA 45
+SVTQIDLDDEALA+ MR+ V TKKE VN A+RDYV R +R++A
Sbjct 1 MSVTQIDLDDEALAEAMRLMGVTTKKETVNAALRDYVARIKRLDA 45
>gi|311897888|dbj|BAJ30296.1| hypothetical protein KSE_45130 [Kitasatospora setae KM-6054]
Length=77
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/48 (57%), Positives = 35/48 (73%), Gaps = 0/48 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALAR 48
+S+TQID+DDEALA MR+ TKK+ VN A+R+Y R RR+EA R
Sbjct 1 MSITQIDIDDEALAAAMRLMGTTTKKDTVNNALREYTARMRRLEAAER 48
>gi|345015828|ref|YP_004818182.1| hypothetical protein Strvi_8594 [Streptomyces violaceusniger
Tu 4113]
gi|344042177|gb|AEM87902.1| Protein of unknown function DUF2191 [Streptomyces violaceusniger
Tu 4113]
Length=83
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/45 (58%), Positives = 35/45 (78%), Gaps = 0/45 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEA 45
+S TQID+DD+ALA+ MR++ TKKE VN+A+R+Y ER R EA
Sbjct 1 MSATQIDIDDDALAEAMRLSGAKTKKEMVNIALREYAERRARTEA 45
>gi|291301560|ref|YP_003512838.1| hypothetical protein Snas_4094 [Stackebrandtia nassauensis DSM
44728]
gi|290570780|gb|ADD43745.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
44728]
Length=72
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (55%), Positives = 38/48 (80%), Gaps = 0/48 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALAR 48
+SVT +++D+ ALA V+R++ V TK++AVNLA+R+Y ER RI AL R
Sbjct 1 MSVTSLNIDEGALAAVLRLSGVRTKRDAVNLALREYAERHERIAALER 48
>gi|297193815|ref|ZP_06911213.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151963|gb|EDY65137.2| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=82
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/46 (48%), Positives = 34/46 (74%), Gaps = 0/46 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEAL 46
VS+T ++LDD+ LA+ MR+ TKK+ +N A+ DYV R +R+EA+
Sbjct 8 VSMTNVNLDDDVLAEAMRLMGTTTKKDTINGALLDYVHRLKRLEAM 53
>gi|258654622|ref|YP_003203778.1| hypothetical protein Namu_4510 [Nakamurella multipartita DSM
44233]
gi|258557847|gb|ACV80789.1| hypothetical protein Namu_4510 [Nakamurella multipartita DSM
44233]
Length=109
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (53%), Positives = 32/46 (70%), Gaps = 0/46 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEAL 46
+SVTQID+DDEALA+V+R + + TK +AVN A+R Y RR
Sbjct 1 MSVTQIDVDDEALAEVLRRSGLATKSDAVNEALRHYAATLRRAAGF 46
>gi|302552927|ref|ZP_07305269.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
gi|302470545|gb|EFL33638.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
Length=91
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/51 (53%), Positives = 35/51 (69%), Gaps = 0/51 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
+SVTQID+DD+AL M +A V TKKEAVNLA+ Y E+ R ++R E
Sbjct 19 MSVTQIDIDDDALERAMALAKVRTKKEAVNLALHFYAEQQERAARISRHFE 69
>gi|302559521|ref|ZP_07311863.1| hypothetical protein SSRG_03036 [Streptomyces griseoflavus Tu4000]
gi|302477139|gb|EFL40232.1| hypothetical protein SSRG_03036 [Streptomyces griseoflavus Tu4000]
Length=73
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/51 (53%), Positives = 35/51 (69%), Gaps = 0/51 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
+SVTQID+DD+AL M +A V TKKEAVNLA+ Y E+ R ++R E
Sbjct 1 MSVTQIDIDDDALERAMALAHVRTKKEAVNLALNFYAEQQERAARISRHFE 51
>gi|239990083|ref|ZP_04710747.1| hypothetical protein SrosN1_22445 [Streptomyces roseosporus NRRL
11379]
Length=73
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (69%), Gaps = 0/48 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALAR 48
+SVTQID+DDEAL M ++ TKKE VN+A+R Y E+ R ++R
Sbjct 1 MSVTQIDIDDEALERAMALSKARTKKETVNIALRFYAEQQERAARISR 48
>gi|312115922|ref|YP_004013518.1| hypothetical protein Rvan_3224 [Rhodomicrobium vannielii ATCC
17100]
gi|311221051|gb|ADP72419.1| Protein of unknown function DUF2191 [Rhodomicrobium vannielii
ATCC 17100]
Length=70
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/35 (63%), Positives = 29/35 (83%), Gaps = 0/35 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVE 38
T IDLDD + +VMRIA V TKKEAV+LAMR++++
Sbjct 3 TNIDLDDTLIDEVMRIANVKTKKEAVHLAMREFLK 37
>gi|337767174|emb|CCB75885.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=73
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/36 (59%), Positives = 27/36 (75%), Gaps = 0/36 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDY 36
+SVT IDLDD+ALA MR + TKK+ VN A+R+Y
Sbjct 1 MSVTTIDLDDDALAKAMRFSGGATKKDVVNEALREY 36
>gi|254391932|ref|ZP_05007125.1| hypothetical protein SSCG_04582 [Streptomyces clavuligerus ATCC
27064]
gi|294811941|ref|ZP_06770584.1| Hypothetical protein SCLAV_1104 [Streptomyces clavuligerus ATCC
27064]
gi|197705612|gb|EDY51424.1| hypothetical protein SSCG_04582 [Streptomyces clavuligerus ATCC
27064]
gi|294324540|gb|EFG06183.1| Hypothetical protein SCLAV_1104 [Streptomyces clavuligerus ATCC
27064]
Length=69
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/45 (54%), Positives = 29/45 (65%), Gaps = 0/45 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALAR 48
T IDLDDE LADV + KKE VN A+R+ +E R+ ALAR
Sbjct 17 TVIDLDDEPLADVALVLGTSAKKETVNTALREVLEYRRQALALAR 61
>gi|326440327|ref|ZP_08215061.1| hypothetical protein SclaA2_04643 [Streptomyces clavuligerus
ATCC 27064]
Length=66
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/45 (54%), Positives = 29/45 (65%), Gaps = 0/45 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALAR 48
T IDLDDE LADV + KKE VN A+R+ +E R+ ALAR
Sbjct 14 TVIDLDDEPLADVALVLGTSAKKETVNTALREVLEYRRQALALAR 58
>gi|182434983|ref|YP_001822702.1| hypothetical protein SGR_1190 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326775500|ref|ZP_08234765.1| hypothetical protein SACT1_1310 [Streptomyces cf. griseus XylebKG-1]
gi|178463499|dbj|BAG18019.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326655833|gb|EGE40679.1| hypothetical protein SACT1_1310 [Streptomyces griseus XylebKG-1]
Length=66
Score = 42.4 bits (98), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/46 (46%), Positives = 29/46 (64%), Gaps = 0/46 (0%)
Query 6 IDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
+ LD E + +VM +A V T ++AV L +RDY+ R R EAL RE
Sbjct 6 VSLDAELVVEVMVLAGVGTPQDAVELVVRDYIARGHRTEALVADRE 51
>gi|146296531|ref|YP_001180302.1| hypothetical protein Csac_1518 [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145410107|gb|ABP67111.1| hypothetical protein Csac_1518 [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length=66
Score = 41.2 bits (95), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/39 (52%), Positives = 26/39 (67%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T I L+DE L M IA V TKKEAV +A++++VE R
Sbjct 3 TNIILNDELLKKAMEIAGVKTKKEAVEIALKEFVENHSR 41
>gi|222528692|ref|YP_002572574.1| hypothetical protein Athe_0684 [Caldicellulosiruptor bescii DSM
6725]
gi|312128190|ref|YP_003993064.1| hypothetical protein Calhy_1985 [Caldicellulosiruptor hydrothermalis
108]
gi|312622998|ref|YP_004024611.1| hypothetical protein Calkro_1948 [Caldicellulosiruptor kronotskyensis
2002]
gi|222455539|gb|ACM59801.1| conserved hypothetical protein [Caldicellulosiruptor bescii DSM
6725]
gi|311778209|gb|ADQ07695.1| Protein of unknown function DUF2191 [Caldicellulosiruptor hydrothermalis
108]
gi|312203465|gb|ADQ46792.1| Protein of unknown function DUF2191 [Caldicellulosiruptor kronotskyensis
2002]
Length=66
Score = 40.8 bits (94), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/39 (52%), Positives = 26/39 (67%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T I +D+ L VM IA V TKKEAV +A+R+Y+E R
Sbjct 3 TNIFIDENLLKKVMEIAGVKTKKEAVEIALREYLENHTR 41
>gi|302871298|ref|YP_003839934.1| hypothetical protein COB47_0632 [Caldicellulosiruptor obsidiansis
OB47]
gi|302574157|gb|ADL41948.1| Protein of unknown function DUF2191 [Caldicellulosiruptor obsidiansis
OB47]
Length=66
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/39 (52%), Positives = 26/39 (67%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T I +D+ L VM IA V TKKEAV +A+R+Y+E R
Sbjct 3 TNIFIDENLLKKVMEIAGVKTKKEAVEIALREYLENHTR 41
>gi|88811565|ref|ZP_01126819.1| hypothetical protein NB231_04150 [Nitrococcus mobilis Nb-231]
gi|88790956|gb|EAR22069.1| hypothetical protein NB231_04150 [Nitrococcus mobilis Nb-231]
Length=73
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/43 (42%), Positives = 31/43 (73%), Gaps = 0/43 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEAL 46
T I+LDDE + +R+A V +K+E V+LA++++VE +R + L
Sbjct 4 TNIELDDELITQALRLAKVRSKRELVHLALKEFVENHQRKDVL 46
>gi|312793700|ref|YP_004026623.1| hypothetical protein Calkr_1511 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180840|gb|ADQ41010.1| Protein of unknown function DUF2191 [Caldicellulosiruptor kristjanssonii
177R1B]
Length=66
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/39 (49%), Positives = 26/39 (67%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T I +D+ L VM IA V TKKEAV +A+++Y+E R
Sbjct 3 TNIFIDENLLKKVMEIAGVKTKKEAVEIALKEYLENHTR 41
>gi|313672675|ref|YP_004050786.1| hypothetical protein Calni_0712 [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939431|gb|ADR18623.1| Protein of unknown function DUF2191 [Calditerrivibrio nitroreducens
DSM 19672]
Length=66
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/39 (42%), Positives = 28/39 (72%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T I +DD+ L + M+++ + +KKE VN A+R++VE +R
Sbjct 3 TNIVIDDKLLEEAMKLSNIKSKKELVNTALREFVENLKR 41
>gi|294631520|ref|ZP_06710080.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292834853|gb|EFF93202.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=90
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYV---ERFRRIEALA 47
+SVTQIDLDD ALA MR+ TKK+ VN A+R+YV ER R EALA
Sbjct 14 MSVTQIDLDDAALAAAMRLMGTTTKKDTVNTALREYVRRIERLRAAEALA 63
>gi|326332642|ref|ZP_08198910.1| hypothetical protein NBCG_04086 [Nocardioidaceae bacterium Broad-1]
gi|325949643|gb|EGD41715.1| hypothetical protein NBCG_04086 [Nocardioidaceae bacterium Broad-1]
Length=75
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/39 (52%), Positives = 28/39 (72%), Gaps = 0/39 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVER 39
++VTQI+LD E LA+V RI+ T +EAV A+R+ V R
Sbjct 1 MAVTQIELDTELLAEVQRISGAATPQEAVEFAVRELVLR 39
>gi|326390063|ref|ZP_08211625.1| Protein of unknown function DUF2191 [Thermoanaerobacter ethanolicus
JW 200]
gi|345018752|ref|YP_004821105.1| hypothetical protein Thewi_2493 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|325993928|gb|EGD52358.1| Protein of unknown function DUF2191 [Thermoanaerobacter ethanolicus
JW 200]
gi|344034095|gb|AEM79821.1| Protein of unknown function DUF2191 [Thermoanaerobacter wiegelii
Rt8.B1]
Length=66
Score = 38.9 bits (89), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/39 (42%), Positives = 28/39 (72%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T I +D+ + + ++I+ + TKKE VNLA++++VE RR
Sbjct 3 TNIVIDENLIKEALKISGLKTKKEVVNLALKEFVENRRR 41
>gi|159184572|ref|NP_354029.2| hypothetical protein Atu1005 [Agrobacterium tumefaciens str.
C58]
gi|159139876|gb|AAK86814.2| conserved hypothetical protein [Agrobacterium tumefaciens str.
C58]
Length=76
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/43 (47%), Positives = 26/43 (61%), Gaps = 0/43 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEAL 46
T I+LDD +A+ M I + TKK V A+RD VE R +AL
Sbjct 3 TNIELDDALIAEAMEITGLPTKKATVEKALRDLVENLGRRKAL 45
>gi|239991868|ref|ZP_04712532.1| hypothetical protein SrosN1_31502 [Streptomyces roseosporus NRRL
11379]
gi|291448862|ref|ZP_06588252.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291351809|gb|EFE78713.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length=66
Score = 38.5 bits (88), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/46 (42%), Positives = 27/46 (59%), Gaps = 0/46 (0%)
Query 6 IDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
+ LD E + + M +A V ++AV L +RDY+ R R EAL RE
Sbjct 6 VSLDAELVVEAMVLAGVGNPQDAVELVVRDYIARGHRTEALVAERE 51
>gi|304318060|ref|YP_003853205.1| hypothetical protein Tthe_2672 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779562|gb|ADL70121.1| Protein of unknown function DUF2191 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length=69
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/39 (39%), Positives = 27/39 (70%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T I +DDE + + ++I + TKKE VN+A+++ +E +R
Sbjct 3 TNIIIDDELIKEALKITGIKTKKEIVNIALKELIENHKR 41
>gi|297154825|gb|ADI04537.1| hypothetical protein SBI_01416 [Streptomyces bingchenggensis
BCW-1]
Length=70
Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/46 (46%), Positives = 29/46 (64%), Gaps = 0/46 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEAL 46
+S T IDLDDE + MR+ V TK +AV +AM + V+R R E +
Sbjct 1 MSRTMIDLDDEMVEQAMRLYGVKTKAKAVRMAMEEAVKRRLRQEGI 46
>gi|77165011|ref|YP_343536.1| hypothetical protein Noc_1521 [Nitrosococcus oceani ATCC 19707]
gi|254434343|ref|ZP_05047851.1| hypothetical protein NOC27_1274 [Nitrosococcus oceani AFC27]
gi|76883325|gb|ABA58006.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
gi|207090676|gb|EDZ67947.1| hypothetical protein NOC27_1274 [Nitrosococcus oceani AFC27]
Length=69
Score = 38.1 bits (87), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/39 (47%), Positives = 27/39 (70%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T IDLDD+ L R +V +KKE V+LA++++VE +R
Sbjct 3 TNIDLDDKLLEAAFRCVSVKSKKELVHLALKEFVEHHQR 41
>gi|91789944|ref|YP_550896.1| hypothetical protein Bpro_4105 [Polaromonas sp. JS666]
gi|91699169|gb|ABE45998.1| hypothetical protein Bpro_4105 [Polaromonas sp. JS666]
Length=112
Score = 38.1 bits (87), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/40 (43%), Positives = 28/40 (70%), Gaps = 0/40 (0%)
Query 3 VTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
+T ID+D+ +A+ MR++ TK+E V+ A+R+ V R RR
Sbjct 2 ITNIDIDEVVVAEAMRLSGARTKREVVDRALREMVARARR 41
>gi|343479041|gb|AEM44210.1| hypothetical protein [uncultured bacterium]
Length=104
Score = 37.7 bits (86), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/43 (47%), Positives = 26/43 (61%), Gaps = 0/43 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEAL 46
T IDLD++ + + MRI TK +AV LAM D V+R R E
Sbjct 24 TVIDLDEDMVTEAMRIFGTKTKAKAVRLAMEDAVKRHLRQEGF 66
>gi|345013747|ref|YP_004816101.1| hypothetical protein Strvi_6366 [Streptomyces violaceusniger
Tu 4113]
gi|344040096|gb|AEM85821.1| Protein of unknown function DUF2191 [Streptomyces violaceusniger
Tu 4113]
Length=70
Score = 37.7 bits (86), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/46 (46%), Positives = 29/46 (64%), Gaps = 0/46 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEAL 46
+S T IDLDDE + MR+ V TK +AV +AM + V+R R E +
Sbjct 1 MSRTMIDLDDEMVEHAMRLYGVKTKAKAVRMAMEEAVKRRLRQEGI 46
>gi|297190915|ref|ZP_06908313.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|297150676|gb|EFH30722.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=66
Score = 37.4 bits (85), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/46 (42%), Positives = 29/46 (64%), Gaps = 0/46 (0%)
Query 6 IDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
I LD E + +VM +A V + ++AV L +RDY+ R R EA +R+
Sbjct 6 ISLDAELVVEVMVLAGVGSPQDAVELVVRDYIARGHRTEARVAARD 51
>gi|290958508|ref|YP_003489690.1| hypothetical protein SCAB_40671 [Streptomyces scabiei 87.22]
gi|260648034|emb|CBG71142.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=84
Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/43 (47%), Positives = 26/43 (61%), Gaps = 0/43 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEAL 46
T IDLD++ + + MRI TK +AV LAM D V+R R E
Sbjct 4 TVIDLDEDMVTEAMRIFGTKTKAKAVRLAMEDAVKRHLRQEGF 46
>gi|284990201|ref|YP_003408755.1| hypothetical protein Gobs_1668 [Geodermatophilus obscurus DSM
43160]
gi|284063446|gb|ADB74384.1| Protein of unknown function DUF2191 [Geodermatophilus obscurus
DSM 43160]
Length=81
Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/34 (53%), Positives = 25/34 (74%), Gaps = 0/34 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMR 34
VS T ID+DD+ +A VMR + TKK+AV+ A+R
Sbjct 6 VSRTNIDIDDDLIAGVMRRYGLATKKDAVDFALR 39
>gi|284038009|ref|YP_003387939.1| hypothetical protein Slin_3129 [Spirosoma linguale DSM 74]
gi|283817302|gb|ADB39140.1| Protein of unknown function DUF2191 [Spirosoma linguale DSM 74]
Length=71
Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/44 (41%), Positives = 28/44 (64%), Gaps = 0/44 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALA 47
T ID+DDE + ++I+ + TKK V LA++ Y+ER R L+
Sbjct 3 TNIDIDDELIDKALQISRLKTKKAVVELALQQYIERQARQNLLS 46
>gi|258592452|emb|CBE68761.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=66
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/44 (37%), Positives = 30/44 (69%), Gaps = 0/44 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALA 47
T I+LD+E + + M++ + TKKE VN A+++ V + +R + L+
Sbjct 4 TNIELDEELVNEAMKLTHLKTKKELVNYALKELVRKVKRRDLLS 47
>gi|333989208|ref|YP_004521822.1| hypothetical protein JDM601_0568 [Mycobacterium sp. JDM601]
gi|333485176|gb|AEF34568.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=70
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/34 (56%), Positives = 24/34 (71%), Gaps = 0/34 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYV 37
T I++DDE A+VMR V TKK AV+LA+R V
Sbjct 4 TNIEIDDELTAEVMRRFGVTTKKAAVDLALRRLV 37
>gi|327190277|gb|EGE57377.1| hypothetical protein RHECNPAF_439009 [Rhizobium etli CNPAF512]
Length=71
Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/44 (48%), Positives = 27/44 (62%), Gaps = 0/44 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALA 47
T ID+DD L M A + TK+ V LA+R+ VER RR A+A
Sbjct 5 TTIDIDDGLLDAAMIAAGLVTKEATVELALRNLVERHRRKNAIA 48
>gi|297545463|ref|YP_003677765.1| hypothetical protein Tmath_2080 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843238|gb|ADH61754.1| Protein of unknown function DUF2191 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length=66
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/39 (36%), Positives = 28/39 (72%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T I +D+ + + ++++ + TKKE VNLA++++VE +R
Sbjct 3 TNIVIDESLIKEALKLSGLKTKKEVVNLALKEFVESRKR 41
>gi|289761723|ref|ZP_06521101.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709229|gb|EFD73245.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=72
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/34 (53%), Positives = 25/34 (74%), Gaps = 0/34 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMR 34
+S T ID+DDE A+VMR + TK+ AV+LA+R
Sbjct 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALR 39
>gi|289579313|ref|YP_003477940.1| hypothetical protein Thit_2161 [Thermoanaerobacter italicus Ab9]
gi|289529026|gb|ADD03378.1| Protein of unknown function DUF2191 [Thermoanaerobacter italicus
Ab9]
Length=64
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/39 (36%), Positives = 28/39 (72%), Gaps = 0/39 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRR 42
T I +D+ + + ++++ + TKKE VNLA++++VE +R
Sbjct 3 TNIVIDESLIKEALKLSGLKTKKEVVNLALKEFVESRKR 41
>gi|15608698|ref|NP_216076.1| hypothetical protein Rv1560 [Mycobacterium tuberculosis H37Rv]
gi|15841027|ref|NP_336064.1| hypothetical protein MT1611 [Mycobacterium tuberculosis CDC1551]
gi|31792745|ref|NP_855238.1| hypothetical protein Mb1586 [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=72
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/34 (53%), Positives = 25/34 (74%), Gaps = 0/34 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMR 34
+S T ID+DDE A+VMR + TK+ AV+LA+R
Sbjct 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALR 39
>gi|167967386|ref|ZP_02549663.1| hypothetical protein MtubH3_04852 [Mycobacterium tuberculosis
H37Ra]
gi|254550580|ref|ZP_05141027.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=67
Score = 35.8 bits (81), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/37 (52%), Positives = 26/37 (71%), Gaps = 0/37 (0%)
Query 1 VSVTQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYV 37
+S T ID+DDE A+VMR + TK+ AV+LA+R V
Sbjct 1 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLV 37
>gi|172034926|ref|YP_001801427.1| hypothetical protein cce_0009 [Cyanothece sp. ATCC 51142]
gi|171696380|gb|ACB49361.1| unknown [Cyanothece sp. ATCC 51142]
Length=66
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/41 (32%), Positives = 29/41 (71%), Gaps = 0/41 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIE 44
T +++DD+ + + ++I TK+E V A+++YV+R +++E
Sbjct 3 TNLEIDDQLIQEALKIGGHSTKREVVEAALKEYVQRRKQLE 43
>gi|328886335|emb|CCA59574.1| hypothetical protein SVEN_6288 [Streptomyces venezuelae ATCC
10712]
Length=67
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/47 (39%), Positives = 27/47 (58%), Gaps = 0/47 (0%)
Query 5 QIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALARSRE 51
I LD E + +VM +A + ++AV +RDY+ R R EA SR+
Sbjct 5 NITLDAELVVEVMVLAGIGNPQDAVEAVVRDYIARGHRTEARTASRD 51
>gi|335034130|ref|ZP_08527491.1| hypothetical protein AGRO_1470 [Agrobacterium sp. ATCC 31749]
gi|333794448|gb|EGL65784.1| hypothetical protein AGRO_1470 [Agrobacterium sp. ATCC 31749]
Length=89
Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/43 (45%), Positives = 26/43 (61%), Gaps = 0/43 (0%)
Query 4 TQIDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEAL 46
T I+LDD +A+ M I + TKK V A+RD V R++ AL
Sbjct 16 TNIELDDALIAEAMEITGLSTKKATVEKALRDLVRIHRQMRAL 58
>gi|290959459|ref|YP_003490641.1| hypothetical protein SCAB_50541 [Streptomyces scabiei 87.22]
gi|260648985|emb|CBG72099.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=66
Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/42 (43%), Positives = 26/42 (62%), Gaps = 0/42 (0%)
Query 6 IDLDDEALADVMRIAAVHTKKEAVNLAMRDYVERFRRIEALA 47
I LD E + +VM +A V + ++AV +RDY+ R R EA A
Sbjct 6 ISLDAELVVEVMVLAGVGSPQDAVEAVVRDYIARGHRTEARA 47
Lambda K H
0.322 0.132 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131066795412
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40