BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0659c

Length=102
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607799|ref|NP_215173.1|  hypothetical protein Rv0659c [Mycob...   203    8e-51
gi|308379835|ref|ZP_07487770.2|  toxin [Mycobacterium tuberculosi...   202    1e-50
gi|340625678|ref|YP_004744130.1|  hypothetical protein MCAN_06581...   199    9e-50
gi|333992022|ref|YP_004524636.1|  PemK-like protein [Mycobacteriu...  79.3    2e-13
gi|297568724|ref|YP_003690068.1|  transcriptional modulator of Ma...  67.0    8e-10
gi|284991043|ref|YP_003409597.1|  transcriptional modulator of Ma...  65.5    3e-09
gi|94266554|ref|ZP_01290240.1|  PemK-like protein [delta proteoba...  58.5    3e-07
gi|108802468|ref|YP_642664.1|  transcriptional modulator of MazE/...  58.5    3e-07
gi|15841413|ref|NP_336450.1|  hypothetical protein MT1992 [Mycoba...  55.1    3e-06
gi|15609079|ref|NP_216458.1|  hypothetical protein Rv1942c [Mycob...  55.1    3e-06
gi|308369568|ref|ZP_07418288.2|  toxin [Mycobacterium tuberculosi...  50.8    6e-05
gi|284042400|ref|YP_003392740.1|  MazF family transcriptional reg...  50.4    8e-05
gi|296132240|ref|YP_003639487.1|  transcriptional modulator of Ma...  49.7    1e-04
gi|302392830|ref|YP_003828650.1|  transcriptional modulator of Ma...  49.3    2e-04
gi|323719559|gb|EGB28684.1|  toxin protein [Mycobacterium tubercu...  48.9    3e-04
gi|167044217|gb|ABZ08898.1|  putative PemK-like protein [uncultur...  48.1    4e-04
gi|340356598|ref|ZP_08679240.1|  stable plasmid inheritance prote...  47.4    7e-04
gi|164515204|emb|CAP47784.1|  putative integron gene cassette pro...  47.4    8e-04
gi|125975181|ref|YP_001039091.1|  transcriptional modulator of Ma...  47.0    0.001
gi|70725964|ref|YP_252878.1|  PemK family DNA-binding protein [St...  47.0    0.001
gi|73662118|ref|YP_300899.1|  hypothetical protein SSP0809 [Staph...  46.6    0.001
gi|78043692|ref|YP_359570.1|  PemK family regulatory protein [Car...  46.2    0.001
gi|309389883|gb|ADO77763.1|  transcriptional modulator of MazE/to...  46.2    0.002
gi|160933249|ref|ZP_02080638.1|  hypothetical protein CLOLEP_0209...  45.8    0.002
gi|338812188|ref|ZP_08624377.1|  transcriptional modulator of Maz...  45.8    0.002
gi|312870265|ref|ZP_07730394.1|  toxin-antitoxin system, toxin co...  45.8    0.002
gi|24215543|ref|NP_713024.1|  PemK-like protein [Leptospira inter...  45.8    0.002
gi|188584950|ref|YP_001916495.1|  transcriptional modulator of Ma...  45.4    0.003
gi|223043948|ref|ZP_03613989.1|  endoribonuclease EndoA [Staphylo...  45.4    0.003
gi|242371565|ref|ZP_04817139.1|  PemK family transcriptional regu...  45.1    0.003
gi|345022771|ref|ZP_08786384.1|  hypothetical protein OTW25_15885...  45.1    0.004
gi|306780008|ref|ZP_07418345.1|  toxin [Mycobacterium tuberculosi...  45.1    0.004
gi|328956672|ref|YP_004374058.1|  endoribonuclease toxin [Carnoba...  45.1    0.004
gi|224477058|ref|YP_002634664.1|  hypothetical protein Sca_1574 [...  45.1    0.004
gi|308376879|ref|ZP_07440381.2|  toxin [Mycobacterium tuberculosi...  45.1    0.004
gi|121535438|ref|ZP_01667248.1|  transcriptional modulator of Maz...  44.7    0.004
gi|167760234|ref|ZP_02432361.1|  hypothetical protein CLOSCI_0260...  44.7    0.004
gi|228474906|ref|ZP_04059635.1|  toxin MazF [Staphylococcus homin...  44.7    0.004
gi|1729793|emb|CAA71064.1|  unnamed protein product [Staphylococc...  44.3    0.005
gi|49484294|ref|YP_041518.1|  hypothetical protein SAR2156 [Staph...  44.3    0.006
gi|15925058|ref|NP_372592.1|  PemK family protein [Staphylococcus...  44.3    0.006
gi|297617943|ref|YP_003703102.1|  transcriptional modulator of Ma...  44.3    0.006
gi|239637368|ref|ZP_04678350.1|  toxin MazF [Staphylococcus warne...  44.3    0.006
gi|114567394|ref|YP_754548.1|  transcriptional modulator of MazE/...  44.3    0.006
gi|82751671|ref|YP_417412.1|  hypothetical protein SAB1953c [Stap...  44.3    0.006
gi|289550308|ref|YP_003471212.1|  Programmed cell death toxin Ydc...  44.3    0.007
gi|220930289|ref|YP_002507198.1|  MazF family transcriptional reg...  44.3    0.007
gi|75413551|sp|Q9F7V5.1|MAZF_STAEP  RecName: Full=mRNA interferas...  43.5    0.009
gi|30249548|ref|NP_841618.1|  PemK-like protein [Nitrosomonas eur...  43.5    0.010
gi|259501955|ref|ZP_05744857.1|  MazF family toxin-antitoxin syst...  43.5    0.010


>gi|15607799|ref|NP_215173.1| hypothetical protein Rv0659c [Mycobacterium tuberculosis H37Rv]
 gi|15840062|ref|NP_335099.1| hypothetical protein MT0688 [Mycobacterium tuberculosis CDC1551]
 gi|31791843|ref|NP_854336.1| hypothetical protein Mb0678c [Mycobacterium bovis AF2122/97]
 75 more sequence titles
 Length=102

 Score =  203 bits (516),  Expect = 8e-51, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPS  60
            MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPS
Sbjct  1    MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPS  60

Query  61   DCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            DCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC
Sbjct  61   DCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102


>gi|308379835|ref|ZP_07487770.2| toxin [Mycobacterium tuberculosis SUMu011]
 gi|308363397|gb|EFP52248.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=118

 Score =  202 bits (514),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPS  60
            MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPS
Sbjct  17   MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPS  76

Query  61   DCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            DCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC
Sbjct  77   DCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  118


>gi|340625678|ref|YP_004744130.1| hypothetical protein MCAN_06581 [Mycobacterium canettii CIPT 
140010059]
 gi|340003868|emb|CCC42998.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=102

 Score =  199 bits (507),  Expect = 9e-50, Method: Compositional matrix adjust.
 Identities = 100/102 (99%), Positives = 101/102 (99%), Gaps = 0/102 (0%)

Query  1    MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPS  60
            MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTA E+RVPS
Sbjct  1    MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAAEDRVPS  60

Query  61   DCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            DCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC
Sbjct  61   DCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102


>gi|333992022|ref|YP_004524636.1| PemK-like protein [Mycobacterium sp. JDM601]
 gi|333487990|gb|AEF37382.1| PemK-like protein [Mycobacterium sp. JDM601]
Length=103

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 43/103 (42%), Positives = 61/103 (60%), Gaps = 2/103 (1%)

Query  1    MRRGELWFAATPGGD-RPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVP  59
            + RGE+W+A  PG   RPVLVLTR     R+ +++V  +T T R + +E+ L   +  +P
Sbjct  2    INRGEVWWADVPGDKIRPVLVLTRQRFTSRLTSLLVAPVTTTVRNIPTEVALDRADG-LP  60

Query  60   SDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
              C  NFDN+ TL R+ F  RI RL+  RL E C+  R + GC
Sbjct  61   RQCAANFDNVFTLGRSRFTSRIARLADERLSEVCRAYRFAVGC  103


>gi|297568724|ref|YP_003690068.1| transcriptional modulator of MazE/toxin, MazF [Desulfurivibrio 
alkaliphilus AHT2]
 gi|296924639|gb|ADH85449.1| transcriptional modulator of MazE/toxin, MazF [Desulfurivibrio 
alkaliphilus AHT2]
Length=104

 Score = 67.0 bits (162),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 37/99 (38%), Positives = 59/99 (60%), Gaps = 2/99 (2%)

Query  1   MRRGEL-WFA-ATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRV  58
           M+RGE+ W+  A P   RPVL+LTRD V + +G V +  +T T R + SE+ L+AV + V
Sbjct  1   MKRGEIRWYKFAAPDKKRPVLILTRDSVLEYLGEVTIAPITTTVRDIPSEVFLSAVNDGV  60

Query  59  PSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLR  97
           P DC +N D++ T+ +      +T L   ++ E  + +R
Sbjct  61  PRDCALNCDHLQTVSKGKIGPLVTSLPRNKMLEVGRAIR  99


>gi|284991043|ref|YP_003409597.1| transcriptional modulator of MazE/toxin, MazF [Geodermatophilus 
obscurus DSM 43160]
 gi|284064288|gb|ADB75226.1| transcriptional modulator of MazE/toxin, MazF [Geodermatophilus 
obscurus DSM 43160]
Length=109

 Score = 65.5 bits (158),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 39/101 (39%), Positives = 55/101 (55%), Gaps = 1/101 (0%)

Query  3    RGELWFAATPG-GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSD  61
            RGE+W+      G RPV+VL+RD V  R    +V   T T RGLVSE+ L   E+ VP  
Sbjct  7    RGEVWWCEMAEIGRRPVVVLSRDAVIPRHRRALVAPCTTTIRGLVSEVGLEPGEDPVPRR  66

Query  62   CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            CVVN D++ ++       R+ RL+  R+ + C  L  +  C
Sbjct  67   CVVNMDSVESVSVAVLVERLGRLADTRMRQICGALAVAVDC  107


>gi|94266554|ref|ZP_01290240.1| PemK-like protein [delta proteobacterium MLMS-1]
 gi|93452829|gb|EAT03355.1| PemK-like protein [delta proteobacterium MLMS-1]
Length=103

 Score = 58.5 bits (140),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 32/93 (35%), Positives = 54/93 (59%), Gaps = 3/93 (3%)

Query  1   MRRGEL-WFA-ATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRV  58
           M+RGE+ W+    P   RPVL+L+RD + + +G V V  +T T R + SE+ L+  +  +
Sbjct  1   MKRGEVRWYKFGRPDKKRPVLILSRDSIIEYLGEVTVAPITGTIRDIPSEVLLSRADG-L  59

Query  59  PSDCVVNFDNIHTLPRTAFRRRITRLSPARLHE  91
           P +C VN D++ T+ ++    R+  L   R+ E
Sbjct  60  PKECAVNCDHLQTVTKSKLGSRLATLPAVRMQE  92


>gi|108802468|ref|YP_642664.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium 
sp. MCS]
 gi|119855295|ref|YP_935898.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium 
sp. KMS]
 gi|108772887|gb|ABG11608.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium 
sp. MCS]
 gi|119698012|gb|ABL95083.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium 
sp. KMS]
Length=107

 Score = 58.5 bits (140),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 36/89 (41%), Positives = 51/89 (58%), Gaps = 1/89 (1%)

Query  3   RGELWFAATPGGD-RPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSD  61
           RGELW+  T   + RPV+VL+RD    R+  V+V   T T RGL SE+ LT  ++ VP  
Sbjct  6   RGELWWCETAEAEPRPVVVLSRDVAIPRLRRVLVAPCTTTVRGLASEVVLTPGDDPVPQR  65

Query  62  CVVNFDNIHTLPRTAFRRRITRLSPARLH  90
             VN D + ++P  A   R+ RL+  R+ 
Sbjct  66  AAVNLDLVESVPVAALGTRLGRLADERMR  94


>gi|15841413|ref|NP_336450.1| hypothetical protein MT1992 [Mycobacterium tuberculosis CDC1551]
 gi|254232113|ref|ZP_04925440.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|13881650|gb|AAK46264.1| hypothetical protein MT1992 [Mycobacterium tuberculosis CDC1551]
 gi|124601172|gb|EAY60182.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=117

 Score = 55.1 bits (131),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 33/101 (33%), Positives = 50/101 (50%), Gaps = 1/101 (0%)

Query  3    RGELWFAATPG-GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSD  61
            RGE+W+      G RPV+VL+RD    R+   +V   T T RGL SE+ L    + +P  
Sbjct  15   RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR  74

Query  62   CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
              VN D++ ++       R+ RL+  R+   C  L  +  C
Sbjct  75   SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  115


>gi|15609079|ref|NP_216458.1| hypothetical protein Rv1942c [Mycobacterium tuberculosis H37Rv]
 gi|31793134|ref|NP_855627.1| hypothetical protein Mb1977c [Mycobacterium bovis AF2122/97]
 gi|121637847|ref|YP_978070.1| hypothetical protein BCG_1981c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 67 more sequence titles
 Length=109

 Score = 55.1 bits (131),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 33/101 (33%), Positives = 50/101 (50%), Gaps = 1/101 (0%)

Query  3    RGELWFAATPG-GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSD  61
            RGE+W+      G RPV+VL+RD    R+   +V   T T RGL SE+ L    + +P  
Sbjct  7    RGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRR  66

Query  62   CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
              VN D++ ++       R+ RL+  R+   C  L  +  C
Sbjct  67   SAVNLDSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  107


>gi|308369568|ref|ZP_07418288.2| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308370871|ref|ZP_07423023.2| toxin [Mycobacterium tuberculosis SUMu003]
 gi|308402959|ref|ZP_07493677.2| toxin [Mycobacterium tuberculosis SUMu012]
 gi|308327162|gb|EFP16013.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308330598|gb|EFP19449.1| toxin [Mycobacterium tuberculosis SUMu003]
 gi|308365868|gb|EFP54719.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=100

 Score = 50.8 bits (120),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 30/96 (32%), Positives = 45/96 (47%), Gaps = 0/96 (0%)

Query  7    WFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSDCVVNF  66
            W      G RPV+VL+RD    R+   +V   T T RGL SE+ L    + +P    VN 
Sbjct  3    WCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNL  62

Query  67   DNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            D++ ++       R+ RL+  R+   C  L  +  C
Sbjct  63   DSVESVSVAVLVNRLGRLADIRMRAICTALEVAVDC  98


>gi|284042400|ref|YP_003392740.1| MazF family transcriptional regulator [Conexibacter woesei DSM 
14684]
 gi|283946621|gb|ADB49365.1| transcriptional modulator of MazE/toxin, MazF [Conexibacter woesei 
DSM 14684]
Length=82

 Score = 50.4 bits (119),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 33/101 (33%), Positives = 44/101 (44%), Gaps = 23/101 (22%)

Query  2    RRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSD  61
            R+GE+W+A      RPVLV+TR                         + L A E  +P D
Sbjct  5    RQGEVWWAEAEDKRRPVLVVTR----------------------TEAIPLGADEG-LPVD  41

Query  62   CVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            C  +FDN+  + R    RR+  L P R HE C+ L A   C
Sbjct  42   CAASFDNVQPVERRLLTRRVGVLPPQRRHEICRALDALADC  82


>gi|296132240|ref|YP_003639487.1| transcriptional modulator of MazE/toxin, MazF [Thermincola sp. 
JR]
 gi|296030818|gb|ADG81586.1| transcriptional modulator of MazE/toxin, MazF [Thermincola potens 
JR]
Length=116

 Score = 49.7 bits (117),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 30/111 (28%), Positives = 55/111 (50%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            +RRG+++FA       +  GG RPVLVL  D         +V A+T   ++  L + +E+
Sbjct  3    IRRGDIFFADLSPVVGSEQGGTRPVLVLQNDIGNQYSPTTIVAAITSQISKAKLPTHVEI  62

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            +A  + +  D V+  + I T+ ++    ++T LS   + +  Q +  S G 
Sbjct  63   SAKNSGLEKDSVILLEQIRTIDKSRLMEKVTSLSEEDMEKVAQAIEISLGL  113


>gi|302392830|ref|YP_003828650.1| transcriptional modulator of MazE/toxin, MazF [Acetohalobium 
arabaticum DSM 5501]
 gi|302204907|gb|ADL13585.1| transcriptional modulator of MazE/toxin, MazF [Acetohalobium 
arabaticum DSM 5501]
Length=116

 Score = 49.3 bits (116),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 29/112 (26%), Positives = 61/112 (55%), Gaps = 11/112 (9%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVA--LTRTRRG-LVSELE  50
            ++RG++++A       +  GG RPVLV+  D + ++    V+VA   ++ ++G L + +E
Sbjct  3    IKRGDVFYADLNPVVGSEQGGIRPVLVIQND-IGNKYSPTVIVAAITSKIKKGKLPTHVE  61

Query  51   LTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            + + E+ +  D V+  + I T+ +   RR++T L+   + +  + L  S G 
Sbjct  62   IDSNEHNLDKDSVILLEQIRTIDKKRLRRQVTHLNEEIVKDVDEALEISVGL  113


>gi|323719559|gb|EGB28684.1| toxin protein [Mycobacterium tuberculosis CDC1551A]
Length=95

 Score = 48.9 bits (115),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 29/89 (33%), Positives = 44/89 (50%), Gaps = 0/89 (0%)

Query  14   GDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSDCVVNFDNIHTLP  73
            G RPV+VL+RD    R+   +V   T T RGL SE+ L    + +P    VN D++ ++ 
Sbjct  5    GRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVS  64

Query  74   RTAFRRRITRLSPARLHEACQTLRASTGC  102
                  R+ RL+  R+   C  L  +  C
Sbjct  65   VAVLVNRLGRLADIRMRAICTALEVAVDC  93


>gi|167044217|gb|ABZ08898.1| putative PemK-like protein [uncultured marine microorganism HF4000_APKG5H11]
Length=105

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 28/87 (33%), Positives = 47/87 (55%), Gaps = 3/87 (3%)

Query  1   MRRGELWFA--ATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRV  58
           M+RG+LW+A    PGG RPV++++RD        + V  +T   R L  E+ L    + +
Sbjct  1   MKRGQLWWAELPPPGGHRPVVLISRDSAYSVREFITVAPVTARVRRLPIEV-LLGPHDGL  59

Query  59  PSDCVVNFDNIHTLPRTAFRRRITRLS  85
           P +   N D++ T+P+++    I  LS
Sbjct  60  PQNSAANLDSMLTIPKSSIHDYIASLS  86


>gi|340356598|ref|ZP_08679240.1| stable plasmid inheritance protein PemK [Sporosarcina newyorkensis 
2681]
 gi|339620525|gb|EGQ25094.1| stable plasmid inheritance protein PemK [Sporosarcina newyorkensis 
2681]
Length=116

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 30/112 (27%), Positives = 57/112 (51%), Gaps = 11/112 (9%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTRT---RRGLVSELE  50
            ++RG+++FA       +  GG RPVLV+  D + +R    V+VA       +  L + +E
Sbjct  3    IKRGDVFFADLSPVVGSEQGGTRPVLVIQND-IGNRFSPTVIVAAITAQIQKAKLPTHVE  61

Query  51   LTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            +TA  +    D V+  + + T+ ++    +IT L  A + +  ++L+ S G 
Sbjct  62   ITAARHGFERDSVILLEQVRTIDKSRLTDKITHLDDALMKQVDESLQVSFGL  113


>gi|164515204|emb|CAP47784.1| putative integron gene cassette protein [uncultured bacterium]
Length=112

 Score = 47.4 bits (111),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 30/107 (29%), Positives = 47/107 (44%), Gaps = 7/107 (6%)

Query  3    RGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVE  55
            RGE+++A       +   G RPVL+++ D   DR G V+ +A+T   +     L L   E
Sbjct  6    RGEVYWADLNPVRGSEQAGHRPVLIISHDVFNDRSGTVIAMAITSKHQRAGFPLNLEISE  65

Query  56   NRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            +  P    +    + TL       RIT+L P  ++ A   L    G 
Sbjct  66   HGFPKASWLKISQVRTLSTLRLEERITKLPPEFVNRAIDGLNEIVGA  112


>gi|125975181|ref|YP_001039091.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum 
ATCC 27405]
 gi|256003155|ref|ZP_05428147.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum 
DSM 2360]
 gi|281418397|ref|ZP_06249416.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum 
JW20]
 gi|125715406|gb|ABN53898.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum 
ATCC 27405]
 gi|255992846|gb|EEU02936.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum 
DSM 2360]
 gi|281407481|gb|EFB37740.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum 
JW20]
 gi|316939347|gb|ADU73381.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum 
DSM 1313]
Length=116

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 30/111 (28%), Positives = 53/111 (48%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            ++RG++++A       +  GG RPVL++  D        V+  A+T    +  L + +EL
Sbjct  3    IKRGDIFYADLSPVIGSEQGGIRPVLIVQNDIGNKYSPTVIASAITSQINKAKLPTHIEL  62

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            +A E  +P D VV  + I T+ +   R +I  L    + +  + L  S G 
Sbjct  63   SAKEYGLPKDSVVLLEQIRTIDKKRLREKIGHLDDELMEKVNEALSISFGL  113


>gi|70725964|ref|YP_252878.1| PemK family DNA-binding protein [Staphylococcus haemolyticus 
JCSC1435]
 gi|123660699|sp|Q4L7V3.1|MAZF_STAHJ RecName: Full=mRNA interferase MazF; AltName: Full=Endoribonuclease 
MazF; AltName: Full=Toxin MazF
 gi|68446688|dbj|BAE04272.1| PemK family of DNA-binding protein [Staphylococcus haemolyticus 
JCSC1435]
Length=121

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 29/111 (27%), Positives = 55/111 (50%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + R+  D V+  + I TL +   + ++T LS  ++ E  + L  S G 
Sbjct  62   EKKKYRLDKDSVILLEQIRTLDKKRLKEKLTYLSDEKMQEVDEALDISLGL  112


>gi|73662118|ref|YP_300899.1| hypothetical protein SSP0809 [Staphylococcus saprophyticus subsp. 
saprophyticus ATCC 15305]
 gi|123643043|sp|Q49Z22.1|MAZF_STAS1 RecName: Full=mRNA interferase MazF; AltName: Full=Endoribonuclease 
MazF; AltName: Full=Toxin MazF
 gi|72494633|dbj|BAE17954.1| conserved hypothetical protein [Staphylococcus saprophyticus 
subsp. saprophyticus ATCC 15305]
Length=120

 Score = 46.6 bits (109),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 54/111 (49%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            MRRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    MRRGDVYLADLSPVQGSEQGGIRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS  ++ E    +  S G 
Sbjct  62   EKSKYKLDKDSVILLEQIRTLDKNRLKEKLTYLSDKKMKEVNNAIDISLGL  112


>gi|78043692|ref|YP_359570.1| PemK family regulatory protein [Carboxydothermus hydrogenoformans 
Z-2901]
 gi|77995807|gb|ABB14706.1| regulatory protein, PemK family [Carboxydothermus hydrogenoformans 
Z-2901]
Length=116

 Score = 46.2 bits (108),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 27/111 (25%), Positives = 56/111 (51%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            +RRG++++A       +  GG RPVL+L  D         ++ A+T    +  L + +E+
Sbjct  3    IRRGDIFYANLSPVVGSEQGGTRPVLILQNDIGNLYSPTTIIAAITSQINKAKLPTHVEI  62

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            +A E+ +  D V+  + I T+ ++  + +++ L+   + +  Q L  S G 
Sbjct  63   SAEESGLEKDSVILLEQIRTIDKSRLKEKVSSLNKELMRKVNQALEISLGL  113


>gi|309389883|gb|ADO77763.1| transcriptional modulator of MazE/toxin, MazF [Halanaerobium 
praevalens DSM 2228]
Length=116

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 30/112 (27%), Positives = 54/112 (49%), Gaps = 11/112 (9%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTRTR---RGLVSELE  50
            ++RG++++A       +  GG RPVLV+  D + +R    V+VA   +R     L + +E
Sbjct  3    VKRGDVYYANLNPVVGSEQGGVRPVLVIQND-IGNRYSPTVIVAAITSRIKKAKLPTHVE  61

Query  51   LTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            +T     +  D V+  + I TL +   +R I  L    + +  Q++  S G 
Sbjct  62   ITGDYTNLDKDSVILLEQIRTLDKKRLQRHIAHLEEDVIEDVNQSIEISLGL  113


>gi|160933249|ref|ZP_02080638.1| hypothetical protein CLOLEP_02095 [Clostridium leptum DSM 753]
 gi|156868323|gb|EDO61695.1| hypothetical protein CLOLEP_02095 [Clostridium leptum DSM 753]
Length=125

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 59/112 (53%), Gaps = 11/112 (9%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVAL---TRTRRGLVSELE  50
            ++RG++++A       +  GG RPVL++ ++ V +R    V+ A     +++  L + ++
Sbjct  6    IKRGDIFYADLSPVVGSEQGGIRPVLIV-QNNVGNRFSPTVIAAAITSQKSKANLPTHIQ  64

Query  51   LTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            L A ++ +  D VV  + I TL +   + ++  L+P  +H+  + L  S G 
Sbjct  65   LRANDSGLSRDSVVLLEQIRTLDKRRLKEKMGTLNPYSMHQVDEALSISFGL  116


>gi|338812188|ref|ZP_08624377.1| transcriptional modulator of MazE/toxin, MazF [Acetonema longum 
DSM 6540]
 gi|337275844|gb|EGO64292.1| transcriptional modulator of MazE/toxin, MazF [Acetonema longum 
DSM 6540]
Length=116

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 27/111 (25%), Positives = 56/111 (51%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            ++RG++++A       +  GG RPVL+L  D        V+V A+T   ++  L + +E+
Sbjct  3    VKRGDIYYANLNPVVGSEQGGHRPVLILQNDVGNKYSPTVIVAAITSQISKAKLPTHVEI  62

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            +  E  +  D V+  + + T+ +   + ++T LS   + +  + +R S G 
Sbjct  63   SGKEFNLDKDSVLLLEQLRTIDKRRLKEKVTHLSEDTMSKVDEAVRISLGL  113


>gi|312870265|ref|ZP_07730394.1| toxin-antitoxin system, toxin component, MazF family [Lactobacillus 
oris PB013-T2-3]
 gi|311094210|gb|EFQ52525.1| toxin-antitoxin system, toxin component, MazF family [Lactobacillus 
oris PB013-T2-3]
 gi|341595865|gb|EGS38502.1| toxin-antitoxin system, toxin component, MazF family [Lactobacillus 
oris F0423]
Length=121

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 31/112 (28%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTRT---RRGLVSELE  50
            ++RGE+++A       +  GG RPVL+L  D V +     V+VA   T   +  L + + 
Sbjct  6    VKRGEIFYADLSPVIGSEQGGVRPVLILQND-VGNHYSPTVIVAAITTQLQKSRLPTHVF  64

Query  51   LTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            L   E+ +  + V+  + + T+ +   + RI ++SPAR+      L+ S G 
Sbjct  65   LPHKESSLAHNSVILLEQVRTIDKQRLQDRIAKISPARMTAVDHALQISFGL  116


>gi|24215543|ref|NP_713024.1| PemK-like protein [Leptospira interrogans serovar Lai str. 56601]
 gi|15042701|gb|AAK82420.1|AF395875_2 ChpK [Leptospira interrogans]
 gi|24196686|gb|AAN50042.1| PemK-like protein [Leptospira interrogans serovar Lai str. 56601]
Length=113

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 32/114 (29%), Positives = 52/114 (46%), Gaps = 14/114 (12%)

Query  1    MRRGELW-------FAATPGGDRPVLVLTRDPV-ADRIGAVVVVALTRTRRGLVSE----  48
            M RGE+W       F + PG  RPVL++  D      I  +V +A+T      +SE    
Sbjct  1    MIRGEIWWVDLGIPFGSEPGFKRPVLIIQDDSFNQSNINTIVSIAITSNLN--LSEAPGN  58

Query  49   LELTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            + ++  ++ +  D V+N   I TL +  F  +  +L   +L E    L+  TG 
Sbjct  59   VFISKKDSSLSKDSVINVSQIVTLDKERFLNKAGKLKSNKLGEVEIGLKLVTGL  112


>gi|188584950|ref|YP_001916495.1| transcriptional modulator of MazE/toxin, MazF [Natranaerobius 
thermophilus JW/NM-WN-LF]
 gi|179349637|gb|ACB83907.1| transcriptional modulator of MazE/toxin, MazF [Natranaerobius 
thermophilus JW/NM-WN-LF]
Length=116

 Score = 45.4 bits (106),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 27/111 (25%), Positives = 57/111 (52%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTRT--RRGLVSELEL  51
            ++RG++++A       +  GG RPVLV+  D        V+VVA+T    +  L + +E+
Sbjct  3    IKRGDIYYADLSPVIGSEQGGVRPVLVVQNDIGNKYSPTVIVVAITSQIQKAKLPTHVEI  62

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            TA +  +  + VV  + + T+ +   + +IT +    +++  + ++ S G 
Sbjct  63   TAEDYNLDKNSVVLTEQLRTIDKQRLKEKITHIDKELMNKISEAIKISLGL  113


>gi|223043948|ref|ZP_03613989.1| endoribonuclease EndoA [Staphylococcus capitis SK14]
 gi|314934144|ref|ZP_07841505.1| toxin-antitoxin system, toxin component, MazF family [Staphylococcus 
caprae C87]
 gi|222442663|gb|EEE48767.1| endoribonuclease EndoA [Staphylococcus capitis SK14]
 gi|313653049|gb|EFS16810.1| toxin-antitoxin system, toxin component, MazF family [Staphylococcus 
caprae C87]
 gi|341597627|gb|EGS40173.1| toxin-antitoxin system, toxin component, MazF family [Staphylococcus 
epidermidis VCU116]
Length=118

 Score = 45.4 bits (106),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 55/111 (50%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS +++ E    L  S G 
Sbjct  62   EKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSESKMKEVDNALDISLGL  112


>gi|242371565|ref|ZP_04817139.1| PemK family transcriptional regulator [Staphylococcus epidermidis 
M23864:W1]
 gi|242350717|gb|EES42318.1| PemK family transcriptional regulator [Staphylococcus epidermidis 
M23864:W1]
Length=120

 Score = 45.1 bits (105),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 55/111 (50%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS +++ E    L  S G 
Sbjct  62   EKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSESKMKEVDNALDISLGL  112


>gi|345022771|ref|ZP_08786384.1| hypothetical protein OTW25_15885 [Ornithinibacillus sp. TW25]
Length=119

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 31/112 (28%), Positives = 52/112 (47%), Gaps = 11/112 (9%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR---TRRGLVSELE  50
            ++RGE++FA       +  GG RPVL+L  D + +R    V+VA       +  L + +E
Sbjct  3    VQRGEVYFADLSPVVGSEQGGVRPVLILQND-IGNRFSPTVIVAAITAQIQKAKLPTHVE  61

Query  51   LTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            + A +     D V+  + I TL +     +IT+L    + +    L  S G 
Sbjct  62   IDAKKYGFDRDSVILLEQIRTLDKQRLTDKITKLDQVMMQKINHALEISLGL  113


>gi|306780008|ref|ZP_07418345.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|306784758|ref|ZP_07423080.1| toxin [Mycobacterium tuberculosis SUMu003]
 gi|306789115|ref|ZP_07427437.1| toxin [Mycobacterium tuberculosis SUMu004]
 11 more sequence titles
 Length=114

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 33/107 (31%), Positives = 51/107 (48%), Gaps = 10/107 (9%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPV-ADRIGAVVVVALTRTRR--GLVSELE  50
            + R E+++A       + P   RPVLV+  DP  A R+  V+   +T       + S + 
Sbjct  3    ISRAEIYWADLGPPSGSQPAKRRPVLVIQSDPYNASRLATVIAAVITSNTALAAMPSNVF  62

Query  51   LTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLR  97
            L A   R+P D VVN   I TL +T    R+  +  + +HE  + LR
Sbjct  63   LPATTTRLPRDSVVNVTAIVTLNKTDLTDRVGEVPASLMHEVDRGLR  109


>gi|328956672|ref|YP_004374058.1| endoribonuclease toxin [Carnobacterium sp. 17-4]
 gi|328672996|gb|AEB29042.1| endoribonuclease toxin [Carnobacterium sp. 17-4]
Length=116

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 27/111 (25%), Positives = 55/111 (50%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            +RRGE+++A       +  GG RPVL++  +        V++ A+T    +  + + +E+
Sbjct  2    VRRGEIYYADLSPVIGSEQGGMRPVLIIQNNVGNHYSPTVIIAAITAKIQKAKMPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            +A E  +  + VV  + I T+ +   R ++T+L    + +  + L  S G 
Sbjct  62   SAEEYNLEKNSVVLLEQIRTIDKQRLREKVTQLDFKMMKKIDEALEISVGL  112


>gi|224477058|ref|YP_002634664.1| hypothetical protein Sca_1574 [Staphylococcus carnosus subsp. 
carnosus TM300]
 gi|222421665|emb|CAL28479.1| conserved hypothetical protein [Staphylococcus carnosus subsp. 
carnosus TM300]
Length=115

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 27/111 (25%), Positives = 55/111 (50%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            MRRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  1    MRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  60

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I T+ +   + ++T LS  ++ E    ++ S G 
Sbjct  61   EKSKYKLDKDSVILLEQIRTVDKKRLKEKLTYLSDEKMKEIDNAIQISLGL  111


>gi|308376879|ref|ZP_07440381.2| toxin [Mycobacterium tuberculosis SUMu008]
 gi|308349607|gb|EFP38458.1| toxin [Mycobacterium tuberculosis SUMu008]
Length=113

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 33/107 (31%), Positives = 51/107 (48%), Gaps = 10/107 (9%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPV-ADRIGAVVVVALTRTRR--GLVSELE  50
            + R E+++A       + P   RPVLV+  DP  A R+  V+   +T       + S + 
Sbjct  2    ISRAEIYWADLGPPSGSQPAKRRPVLVIQSDPYNASRLATVIAAVITSNTALAAMPSNVF  61

Query  51   LTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLR  97
            L A   R+P D VVN   I TL +T    R+  +  + +HE  + LR
Sbjct  62   LPATTTRLPRDSVVNVTAIVTLNKTDLTDRVGEVPASLMHEVDRGLR  108


>gi|121535438|ref|ZP_01667248.1| transcriptional modulator of MazE/toxin, MazF [Thermosinus carboxydivorans 
Nor1]
 gi|121305947|gb|EAX46879.1| transcriptional modulator of MazE/toxin, MazF [Thermosinus carboxydivorans 
Nor1]
Length=116

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 27/111 (25%), Positives = 57/111 (52%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            ++RG++++A       +  GG RPVL++  D        V+V A+T   ++  L + +E+
Sbjct  3    VKRGDIYYANLSPVVGSEQGGHRPVLIIQNDVGNKYSPTVIVAAITSQISKAKLPTHVEI  62

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            +A +  +  D VV  + + T+ +   + ++T LS   + +  + +R S G 
Sbjct  63   SAKQFSLDKDSVVLLEQLRTIDKRRLKEKVTHLSEDIMVKVDEAIRISLGL  113


>gi|167760234|ref|ZP_02432361.1| hypothetical protein CLOSCI_02607 [Clostridium scindens ATCC 
35704]
 gi|167662117|gb|EDS06247.1| hypothetical protein CLOSCI_02607 [Clostridium scindens ATCC 
35704]
Length=140

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 28/113 (25%), Positives = 56/113 (50%), Gaps = 13/113 (11%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVAL----TRTRRGLVSEL  49
            +RRG++++A       +  GG RPVL+L+ D   +R    V+VA      R +  L +  
Sbjct  15   VRRGDIYYAKLDPHIGSEQGGTRPVLILSND-TGNRFSPTVIVAAITSRVRKKTKLPTHY  73

Query  50   ELTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
             L  V+  +P + ++ F+ + T+ ++  + ++T+L    + +    L  S G 
Sbjct  74   YLEDVDG-LPENSIILFEQVRTIDKSRLKEKVTQLDKQSMEKIVLPLFISMGA  125


>gi|228474906|ref|ZP_04059635.1| toxin MazF [Staphylococcus hominis SK119]
 gi|314935975|ref|ZP_07843325.1| toxin-antitoxin system, toxin component, MazF family [Staphylococcus 
hominis subsp. hominis C80]
 gi|228271138|gb|EEK12518.1| toxin MazF [Staphylococcus hominis SK119]
 gi|313655981|gb|EFS19723.1| toxin-antitoxin system, toxin component, MazF family [Staphylococcus 
hominis subsp. hominis C80]
Length=120

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 29/110 (27%), Positives = 54/110 (50%), Gaps = 9/110 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTG  101
               + R+  D V+  + I TL +   + ++T LS  ++ E    L  S G
Sbjct  62   EKKKYRLDKDSVILLEQIRTLDKKRLKEKLTYLSEDKMKEVDDALDISLG  111


>gi|1729793|emb|CAA71064.1| unnamed protein product [Staphylococcus aureus subsp. aureus 
COL]
Length=136

 Score = 44.3 bits (103),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 54/111 (49%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS  ++ E    L  S G 
Sbjct  62   EKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGL  112


>gi|49484294|ref|YP_041518.1| hypothetical protein SAR2156 [Staphylococcus aureus subsp. aureus 
MRSA252]
 gi|257426206|ref|ZP_05602621.1| toxin mazF [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428865|ref|ZP_05605259.1| toxin mazF [Staphylococcus aureus subsp. aureus 65-1322]
 39 more sequence titles
 Length=120

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 54/111 (49%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS  ++ E    L  S G 
Sbjct  62   EKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGL  112


>gi|15925058|ref|NP_372592.1| PemK family protein [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927643|ref|NP_375176.1| hypothetical protein SA1873 [Staphylococcus aureus subsp. aureus 
N315]
 gi|21283721|ref|NP_646809.1| hypothetical protein MW1992 [Staphylococcus aureus subsp. aureus 
MW2]
 115 more sequence titles
 Length=120

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 54/111 (49%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS  ++ E    L  S G 
Sbjct  62   EKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGL  112


>gi|297617943|ref|YP_003703102.1| transcriptional modulator of MazE/toxin, MazF [Syntrophothermus 
lipocalidus DSM 12680]
 gi|297145780|gb|ADI02537.1| transcriptional modulator of MazE/toxin, MazF [Syntrophothermus 
lipocalidus DSM 12680]
Length=127

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 31/111 (28%), Positives = 53/111 (48%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            ++RGE++FA       +  GG RPVLV+  D         +V+A+T    +  L + +EL
Sbjct  14   IKRGEVYFAQLNPVVGSEQGGIRPVLVVQNDIGNQYSPTTIVLAITSQINKAKLPTHVEL  73

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
             A +  +  D V+  + I T+ +T  ++RI  L    + +    L  S G 
Sbjct  74   RAAKYGLDKDSVILGEQIRTIDKTRLKQRIAFLDEETMAKVNHALEISLGL  124


>gi|239637368|ref|ZP_04678350.1| toxin MazF [Staphylococcus warneri L37603]
 gi|239596968|gb|EEQ79483.1| toxin MazF [Staphylococcus warneri L37603]
 gi|330684804|gb|EGG96497.1| toxin-antitoxin system, toxin component, MazF family [Staphylococcus 
epidermidis VCU121]
Length=120

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 54/111 (49%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS  ++ E    L  S G 
Sbjct  62   EKKKYKLDKDSVILLEQIRTLDKNRLKEKLTYLSDNKMKEVDYALDISLGL  112


>gi|114567394|ref|YP_754548.1| transcriptional modulator of MazE/toxin, MazF [Syntrophomonas 
wolfei subsp. wolfei str. Goettingen]
 gi|114338329|gb|ABI69177.1| transcriptional modulator of MazE/toxin, MazF [Syntrophomonas 
wolfei subsp. wolfei str. Goettingen]
Length=115

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 30/111 (28%), Positives = 55/111 (50%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            ++RGE++FA       +  GG RPV+V+  D         +++A+T    +  L + +EL
Sbjct  2    IKRGEIYFAQLNPVIGSEQGGVRPVVVVQNDIGNQYSPTTIILAITAQINKAKLPTHIEL  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
             A    +  D V+  + I T+ +T  ++RI  L+   +++  Q L  S G 
Sbjct  62   KAAVYGLERDSVILAEQIRTIDKTRLKQRIAVLNDDTMNKVDQALNISLGL  112


>gi|82751671|ref|YP_417412.1| hypothetical protein SAB1953c [Staphylococcus aureus RF122]
 gi|123548226|sp|Q2YUI5.1|MAZF_STAAB RecName: Full=mRNA interferase MazF; AltName: Full=Endoribonuclease 
MazF; AltName: Full=Toxin MazF
 gi|82657202|emb|CAI81642.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length=117

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 54/111 (49%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS  ++ E    L  S G 
Sbjct  62   EKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGL  112


>gi|289550308|ref|YP_003471212.1| Programmed cell death toxin YdcE [Staphylococcus lugdunensis 
HKU09-01]
 gi|315660231|ref|ZP_07913086.1| PemK family transcriptional regulator [Staphylococcus lugdunensis 
M23590]
 gi|289179840|gb|ADC87085.1| Programmed cell death toxin YdcE [Staphylococcus lugdunensis 
HKU09-01]
 gi|315494658|gb|EFU82998.1| PemK family transcriptional regulator [Staphylococcus lugdunensis 
M23590]
 gi|339894193|emb|CCB53458.1| conserved hypothetical protein [Staphylococcus lugdunensis N920143]
Length=116

 Score = 44.3 bits (103),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 54/111 (49%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T R  +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS  ++ E    L  S G 
Sbjct  62   GKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSEDKMKEVDHALDISLGL  112


>gi|220930289|ref|YP_002507198.1| MazF family transcriptional regulator [Clostridium cellulolyticum 
H10]
 gi|220000617|gb|ACL77218.1| transcriptional modulator of MazE/toxin, MazF [Clostridium cellulolyticum 
H10]
Length=116

 Score = 44.3 bits (103),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 28/111 (26%), Positives = 51/111 (46%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            ++RG++++A       +  GG RPVL++  D        V+  A+T    +  L + +E+
Sbjct  3    IKRGDIYYADLSPVIGSEQGGVRPVLIVQNDVGNKYSPTVIAAAITSQINKAKLPTHIEI  62

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
             A+E  +  D V+  + I T+ +   R +I  L    + E    L  S G 
Sbjct  63   GALEYGLAKDSVILLEQIRTIDKKRLREKIGHLDDELMTEVNNALEVSFGL  113


>gi|75413551|sp|Q9F7V5.1|MAZF_STAEP RecName: Full=mRNA interferase MazF; AltName: Full=Endoribonuclease 
MazF; AltName: Full=Toxin MazF
 gi|10834755|gb|AAG23809.1|AF274004_1 unknown [Staphylococcus epidermidis]
Length=120

 Score = 43.5 bits (101),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 27/111 (25%), Positives = 54/111 (49%), Gaps = 9/111 (8%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTR--TRRGLVSELEL  51
            +RRG+++ A       +  GG RPV+++  D        V+V A+T    +  + + +E+
Sbjct  2    IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITDGINKAKIPTHVEI  61

Query  52   TAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
               + ++  D V+  + I TL +   + ++T LS +++ E    L  S G 
Sbjct  62   EKKKYKLDKDSVILLEQIRTLDKKRLKEKLTFLSESKMIEVDNALDISLGL  112


>gi|30249548|ref|NP_841618.1| PemK-like protein [Nitrosomonas europaea ATCC 19718]
 gi|30138911|emb|CAD85490.1| PemK-like protein [Nitrosomonas europaea ATCC 19718]
Length=112

 Score = 43.5 bits (101),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 29/107 (28%), Positives = 48/107 (45%), Gaps = 7/107 (6%)

Query  3    RGEL-WFAATP------GGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVE  55
            RGE+ W    P       G+RP+LVL++D   +R G V+ +ALT   +     L    ++
Sbjct  6    RGEIRWANLNPTVGREQSGERPILVLSQDIFNERSGTVIAMALTSQEQRAGFPLTYEILK  65

Query  56   NRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            + +P    V    I TL      ++I  ++P  L +  + L    G 
Sbjct  66   SSLPKRSWVKISQIRTLSTERIGKKIGAIAPEELAQIVEGLNEIIGS  112


>gi|259501955|ref|ZP_05744857.1| MazF family toxin-antitoxin system [Lactobacillus antri DSM 16041]
 gi|259170132|gb|EEW54627.1| MazF family toxin-antitoxin system [Lactobacillus antri DSM 16041]
Length=121

 Score = 43.5 bits (101),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 30/112 (27%), Positives = 55/112 (50%), Gaps = 11/112 (9%)

Query  1    MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALTRT---RRGLVSELE  50
            ++RGE+++A       +  GG RPVL+L  D V +     V+VA   T   +  L + + 
Sbjct  6    VKRGEIFYADLSPVVGSEQGGVRPVLILQND-VGNHYSPTVIVAAITTQLQKSRLPTHVF  64

Query  51   LTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC  102
            L   E+ +  + V+  + + T+ +   + RI ++ PAR+      L+ S G 
Sbjct  65   LPHKESSLTRNSVILLEQVRTIDKQRLQDRIAKIGPARMTAVNHALQISLGL  116



Lambda     K      H
   0.326    0.138    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128294982110




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40