BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0681 Length=196 Score E Sequences producing significant alignments: (Bits) Value gi|15840084|ref|NP_335121.1| transcriptional regulator, putative... 395 2e-108 gi|298524173|ref|ZP_07011582.1| transcriptional regulator [Mycob... 394 3e-108 gi|15607821|ref|NP_215195.1| TetR family transcriptional regulat... 392 2e-107 gi|289752729|ref|ZP_06512107.1| TetR family transcriptional regu... 391 3e-107 gi|289573287|ref|ZP_06453514.1| transcriptional regulator, tetR-... 390 6e-107 gi|41410237|ref|NP_963073.1| hypothetical protein MAP4139 [Mycob... 365 2e-99 gi|296168532|ref|ZP_06850337.1| transcriptional regulator [Mycob... 358 2e-97 gi|342858834|ref|ZP_08715488.1| TetR family transcriptional regu... 352 2e-95 gi|240167679|ref|ZP_04746338.1| transcriptional regulator, TetR ... 349 1e-94 gi|254822763|ref|ZP_05227764.1| transcriptional regulator, TetR ... 333 6e-90 gi|118616546|ref|YP_904878.1| TetR family transcriptional regula... 333 7e-90 gi|108797956|ref|YP_638153.1| TetR family transcriptional regula... 314 4e-84 gi|118469406|ref|YP_885783.1| TetR family transcriptional regula... 312 2e-83 gi|120402289|ref|YP_952118.1| TetR family transcriptional regula... 306 1e-81 gi|145225655|ref|YP_001136333.1| TetR family transcriptional reg... 306 1e-81 gi|333989333|ref|YP_004521947.1| TetR family transcriptional reg... 293 9e-78 gi|169630931|ref|YP_001704580.1| TetR family transcriptional reg... 215 2e-54 gi|88855983|ref|ZP_01130645.1| putative transcriptional regulato... 115 4e-24 gi|111021638|ref|YP_704610.1| TetR family transcriptional regula... 107 8e-22 gi|330470309|ref|YP_004408052.1| regulatory protein TetR [Verruc... 106 2e-21 gi|226364175|ref|YP_002781957.1| TetR family transcriptional reg... 105 2e-21 gi|300782767|ref|YP_003763058.1| TetR family transcriptional reg... 103 1e-20 gi|238061256|ref|ZP_04605965.1| transcriptional regulator [Micro... 102 3e-20 gi|297561984|ref|YP_003680958.1| TetR family transcriptional reg... 102 3e-20 gi|126650754|ref|ZP_01722970.1| probable transcriptional regulat... 102 4e-20 gi|229062670|ref|ZP_04199979.1| Transcriptional regulator [Bacil... 100 1e-19 gi|42784186|ref|NP_981433.1| transcriptional regulator, putative... 99.0 3e-19 gi|229032641|ref|ZP_04188604.1| Transcriptional regulator [Bacil... 99.0 4e-19 gi|229175699|ref|ZP_04303207.1| Transcriptional regulator [Bacil... 98.6 4e-19 gi|118480089|ref|YP_897240.1| TetR family transcriptional regula... 98.6 4e-19 gi|340524141|gb|AEK39346.1| TetR family transcriptional regulato... 98.6 5e-19 gi|315503618|ref|YP_004082505.1| regulatory protein TetR [Microm... 97.8 7e-19 gi|302870106|ref|YP_003838743.1| regulatory protein TetR [Microm... 97.8 7e-19 gi|229199149|ref|ZP_04325832.1| Transcriptional regulator [Bacil... 97.8 7e-19 gi|228955267|ref|ZP_04117275.1| Transcriptional regulator [Bacil... 97.8 7e-19 gi|324328936|gb|ADY24196.1| transcriptional regulator, putative ... 97.4 1e-18 gi|52140530|ref|YP_086301.1| TetR family transcriptional regulat... 97.4 1e-18 gi|218906201|ref|YP_002454035.1| putative transcriptional regula... 97.4 1e-18 gi|228948732|ref|ZP_04111010.1| Transcriptional regulator [Bacil... 97.1 1e-18 gi|49481059|ref|YP_039025.1| TetR family transcriptional regulat... 97.1 1e-18 gi|229020240|ref|ZP_04177012.1| Transcriptional regulator [Bacil... 96.3 2e-18 gi|229153193|ref|ZP_04281372.1| Transcriptional regulator [Bacil... 96.3 2e-18 gi|229181298|ref|ZP_04308628.1| Transcriptional regulator [Bacil... 96.3 2e-18 gi|229072490|ref|ZP_04205692.1| Transcriptional regulator [Bacil... 95.9 3e-18 gi|206970070|ref|ZP_03231023.1| putative transcriptional regulat... 95.9 3e-18 gi|228923733|ref|ZP_04087011.1| Transcriptional regulator [Bacil... 95.9 3e-18 gi|163942723|ref|YP_001647607.1| TetR family transcriptional reg... 95.5 4e-18 gi|218232056|ref|YP_002369804.1| putative transcriptional regula... 95.1 4e-18 gi|30023040|ref|NP_834671.1| TetR family transcriptional regulat... 94.7 6e-18 gi|71042350|pdb|1ZK8|A Chain A, Crystal Structure Of Transcripti... 94.7 6e-18 >gi|15840084|ref|NP_335121.1| transcriptional regulator, putative [Mycobacterium tuberculosis CDC1551] gi|148821886|ref|YP_001286640.1| TetR family transcriptional regulator [Mycobacterium tuberculosis F11] gi|167967582|ref|ZP_02549859.1| hypothetical transcriptional regulatory protein, tetR-family [Mycobacterium tuberculosis H37Ra] 11 more sequence titles Length=218 Score = 395 bits (1015), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 196/196 (100%), Positives = 196/196 (100%), Gaps = 0/196 (0%) Query 1 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 60 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI Sbjct 23 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 82 Query 61 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 120 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT Sbjct 83 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 142 Query 121 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 180 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL Sbjct 143 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 202 Query 181 AAGMERRTTHGGTAST 196 AAGMERRTTHGGTAST Sbjct 203 AAGMERRTTHGGTAST 218 >gi|298524173|ref|ZP_07011582.1| transcriptional regulator [Mycobacterium tuberculosis 94_M4241A] gi|298493967|gb|EFI29261.1| transcriptional regulator [Mycobacterium tuberculosis 94_M4241A] gi|323720905|gb|EGB29971.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A] Length=199 Score = 394 bits (1013), Expect = 3e-108, Method: Compositional matrix adjust. Identities = 196/196 (100%), Positives = 196/196 (100%), Gaps = 0/196 (0%) Query 1 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 60 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI Sbjct 4 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 63 Query 61 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 120 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT Sbjct 64 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 123 Query 121 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 180 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL Sbjct 124 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 183 Query 181 AAGMERRTTHGGTAST 196 AAGMERRTTHGGTAST Sbjct 184 AAGMERRTTHGGTAST 199 >gi|15607821|ref|NP_215195.1| TetR family transcriptional regulator [Mycobacterium tuberculosis H37Rv] gi|31791865|ref|NP_854358.1| TetR family transcriptional regulator [Mycobacterium bovis AF2122/97] gi|121636602|ref|YP_976825.1| TetR family transcriptional regulator [Mycobacterium bovis BCG str. Pasteur 1173P2] 57 more sequence titles Length=196 Score = 392 bits (1007), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 195/196 (99%), Positives = 196/196 (100%), Gaps = 0/196 (0%) Query 1 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 60 +ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI Sbjct 1 MARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 60 Query 61 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 120 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT Sbjct 61 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 120 Query 121 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 180 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL Sbjct 121 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 180 Query 181 AAGMERRTTHGGTAST 196 AAGMERRTTHGGTAST Sbjct 181 AAGMERRTTHGGTAST 196 >gi|289752729|ref|ZP_06512107.1| TetR family transcriptional regulator [Mycobacterium tuberculosis EAS054] gi|289693316|gb|EFD60745.1| TetR family transcriptional regulator [Mycobacterium tuberculosis EAS054] Length=196 Score = 391 bits (1004), Expect = 3e-107, Method: Compositional matrix adjust. Identities = 194/196 (99%), Positives = 196/196 (100%), Gaps = 0/196 (0%) Query 1 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 60 +ARPAKLSRESIVEGALTFLD+EGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI Sbjct 1 MARPAKLSRESIVEGALTFLDQEGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 60 Query 61 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 120 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT Sbjct 61 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 120 Query 121 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 180 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL Sbjct 121 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 180 Query 181 AAGMERRTTHGGTAST 196 AAGMERRTTHGGTAST Sbjct 181 AAGMERRTTHGGTAST 196 >gi|289573287|ref|ZP_06453514.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis K85] gi|339630751|ref|YP_004722393.1| TetR family transcriptional regulator [Mycobacterium africanum GM041182] gi|289537718|gb|EFD42296.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis K85] gi|339330107|emb|CCC25762.1| putative transcriptional regulatory protein (possibly TETR-family) [Mycobacterium africanum GM041182] Length=196 Score = 390 bits (1002), Expect = 6e-107, Method: Compositional matrix adjust. Identities = 194/196 (99%), Positives = 195/196 (99%), Gaps = 0/196 (0%) Query 1 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 60 +ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI Sbjct 1 MARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 60 Query 61 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 120 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTA T Sbjct 61 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAPT 120 Query 121 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 180 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL Sbjct 121 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRL 180 Query 181 AAGMERRTTHGGTAST 196 AAGMERRTTHGGTAST Sbjct 181 AAGMERRTTHGGTAST 196 >gi|41410237|ref|NP_963073.1| hypothetical protein MAP4139 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465892|ref|YP_883628.1| TetR family transcriptional regulator [Mycobacterium avium 104] gi|254776929|ref|ZP_05218445.1| transcriptional regulator, TetR family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|41399071|gb|AAS06689.1| hypothetical protein MAP_4139 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167179|gb|ABK68076.1| transcriptional regulator, TetR family protein [Mycobacterium avium 104] gi|336460541|gb|EGO39434.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=210 Score = 365 bits (937), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 178/190 (94%), Positives = 187/190 (99%), Gaps = 0/190 (0%) Query 2 ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 61 ARPAKLSRE I++GALTFLDREGWD+LTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR Sbjct 21 ARPAKLSREGIIDGALTFLDREGWDALTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 80 Query 62 VIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 121 VIDDIITMLNRVG GRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR Sbjct 81 VIDDIITMLNRVGEGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 140 Query 122 GAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLA 181 GAAAPVI+VLSSYGLDGE+AF+AALEFWSALHGFVLLEMTGVMDDIDTDA+F+DMVLRLA Sbjct 141 GAAAPVISVLSSYGLDGEEAFHAALEFWSALHGFVLLEMTGVMDDIDTDALFSDMVLRLA 200 Query 182 AGMERRTTHG 191 AG+ERRT HG Sbjct 201 AGLERRTAHG 210 >gi|296168532|ref|ZP_06850337.1| transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896674|gb|EFG76312.1| transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=214 Score = 358 bits (920), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 174/194 (90%), Positives = 187/194 (97%), Gaps = 0/194 (0%) Query 2 ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 61 +RPAKLSR+ I++GALTFLDREGWD+LTINALATQLGTKGPSLYNHVDSLEDLRR+VRIR Sbjct 21 SRPAKLSRDGIIDGALTFLDREGWDALTINALATQLGTKGPSLYNHVDSLEDLRRSVRIR 80 Query 62 VIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 121 VIDDIITMLNRVG GRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR Sbjct 81 VIDDIITMLNRVGEGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 140 Query 122 GAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLA 181 GAAAPVI+VLSSYGLDG++AF+AALEFWSALHGFVLLEMTGVMDDIDTDA+F+DMVLRLA Sbjct 141 GAAAPVISVLSSYGLDGDEAFHAALEFWSALHGFVLLEMTGVMDDIDTDALFSDMVLRLA 200 Query 182 AGMERRTTHGGTAS 195 AG+ERR H G S Sbjct 201 AGLERRVAHNGARS 214 >gi|342858834|ref|ZP_08715488.1| TetR family transcriptional regulator [Mycobacterium colombiense CECT 3035] gi|342133075|gb|EGT86278.1| TetR family transcriptional regulator [Mycobacterium colombiense CECT 3035] Length=214 Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 172/191 (91%), Positives = 183/191 (96%), Gaps = 0/191 (0%) Query 2 ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 61 +RPAKLSR+ I++GALTFLDREGWD+LTINALA QLGTKGPSLYNHVDSLEDLRRAVRIR Sbjct 21 SRPAKLSRDGIIDGALTFLDREGWDALTINALAMQLGTKGPSLYNHVDSLEDLRRAVRIR 80 Query 62 VIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 121 VIDDIITMLNRVG GRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMP GGDDPEYTAATR Sbjct 81 VIDDIITMLNRVGQGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPFGGDDPEYTAATR 140 Query 122 GAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLA 181 GAAAPVIAVLSSYGLDGE AF+A+LEFWSALHGFVLLEMTGVMD+IDTDA+F+DMVLRLA Sbjct 141 GAAAPVIAVLSSYGLDGEAAFHASLEFWSALHGFVLLEMTGVMDEIDTDALFSDMVLRLA 200 Query 182 AGMERRTTHGG 192 AG+ERRT G Sbjct 201 AGLERRTATDG 211 >gi|240167679|ref|ZP_04746338.1| transcriptional regulator, TetR family protein [Mycobacterium kansasii ATCC 12478] Length=215 Score = 349 bits (896), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 177/191 (93%), Positives = 185/191 (97%), Gaps = 0/191 (0%) Query 2 ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 61 ARPAKLSR+SIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVR+R Sbjct 21 ARPAKLSRDSIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRVR 80 Query 62 VIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 121 VIDDIITMLNRVG GRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDP+Y AATR Sbjct 81 VIDDIITMLNRVGEGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPDYAAATR 140 Query 122 GAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLA 181 AAAPVIAVLSSYGL+GE+AFYAALEFWSALHGFVLLEMTGVMD+IDTDAVF+DMVLRLA Sbjct 141 SAAAPVIAVLSSYGLEGEEAFYAALEFWSALHGFVLLEMTGVMDEIDTDAVFSDMVLRLA 200 Query 182 AGMERRTTHGG 192 AGME+RT G Sbjct 201 AGMEKRTAEHG 211 >gi|254822763|ref|ZP_05227764.1| transcriptional regulator, TetR family protein [Mycobacterium intracellulare ATCC 13950] Length=214 Score = 333 bits (855), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 169/191 (89%), Positives = 180/191 (95%), Gaps = 0/191 (0%) Query 2 ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 61 +RP KLSRE I++GALTFLDREGWD+LTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR Sbjct 21 SRPTKLSREGIIDGALTFLDREGWDALTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 80 Query 62 VIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 121 VIDDII MLNRVG GRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGG+D EY AATR Sbjct 81 VIDDIIMMLNRVGEGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGEDAEYAAATR 140 Query 122 GAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLA 181 AAAPVIAVLSSYGLDG +AF+AALEFWSA+HGFVLLEMTGVMDDIDTD +F+DMVLRLA Sbjct 141 SAAAPVIAVLSSYGLDGAEAFHAALEFWSAMHGFVLLEMTGVMDDIDTDVLFSDMVLRLA 200 Query 182 AGMERRTTHGG 192 AG+ERRT H G Sbjct 201 AGLERRTAHDG 211 >gi|118616546|ref|YP_904878.1| TetR family transcriptional regulator [Mycobacterium ulcerans Agy99] gi|183981031|ref|YP_001849322.1| TetR family transcriptional regulator [Mycobacterium marinum M] gi|118568656|gb|ABL03407.1| transcription regulator, TetR family [Mycobacterium ulcerans Agy99] gi|183174357|gb|ACC39467.1| transcription regulator, TetR family [Mycobacterium marinum M] Length=215 Score = 333 bits (854), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 168/194 (87%), Positives = 183/194 (95%), Gaps = 0/194 (0%) Query 2 ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 61 +RPAKLSR++IV+GALTFLDREGWDSLTINALATQLGTKGPSLYNHV SLEDLR AVR+R Sbjct 21 SRPAKLSRDAIVDGALTFLDREGWDSLTINALATQLGTKGPSLYNHVVSLEDLRGAVRVR 80 Query 62 VIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 121 VIDDII MLNRVG GR+RDDAVLVMAGAYRSYAHHHPGRYSAFTRMP GG+DPEY AATR Sbjct 81 VIDDIIMMLNRVGEGRSRDDAVLVMAGAYRSYAHHHPGRYSAFTRMPPGGEDPEYAAATR 140 Query 122 GAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLA 181 AAAPVIAVLSSYGL+GEQAF+AALEFWSALHGFVLLEMTG+M++IDTDAVF+DMVLRLA Sbjct 141 AAAAPVIAVLSSYGLEGEQAFHAALEFWSALHGFVLLEMTGLMEEIDTDAVFSDMVLRLA 200 Query 182 AGMERRTTHGGTAS 195 AGME+R +H G S Sbjct 201 AGMEKRISHTGAES 214 >gi|108797956|ref|YP_638153.1| TetR family transcriptional regulator [Mycobacterium sp. MCS] gi|119867053|ref|YP_937005.1| TetR family transcriptional regulator [Mycobacterium sp. KMS] gi|126433619|ref|YP_001069310.1| TetR family transcriptional regulator [Mycobacterium sp. JLS] gi|108768375|gb|ABG07097.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS] gi|119693142|gb|ABL90215.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS] gi|126233419|gb|ABN96819.1| transcriptional regulator, TetR family [Mycobacterium sp. JLS] Length=212 Score = 314 bits (805), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 152/187 (82%), Positives = 167/187 (90%), Gaps = 0/187 (0%) Query 2 ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 61 A+ +LSR+SIV ALTFLDREGWD+LTINALATQLGTKGPSLYNHV SL+DLRR VR+R Sbjct 18 AKTTRLSRDSIVNAALTFLDREGWDALTINALATQLGTKGPSLYNHVHSLDDLRRTVRMR 77 Query 62 VIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 121 V+ DII ML VG GR RDDAV+ MA +YRSYAHHHPGRYSAFTRMPLGGDDPE+T ATR Sbjct 78 VVGDIIGMLTTVGQGRTRDDAVMAMASSYRSYAHHHPGRYSAFTRMPLGGDDPEFTDATR 137 Query 122 GAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLA 181 AA PVI VL+SYGLDGE AFYAALEFWSA+HGFVLLEMTGVM+ IDTDAVFTDMVLRLA Sbjct 138 AAATPVIEVLASYGLDGEDAFYAALEFWSAMHGFVLLEMTGVMNGIDTDAVFTDMVLRLA 197 Query 182 AGMERRT 188 +GMERR+ Sbjct 198 SGMERRS 204 >gi|118469406|ref|YP_885783.1| TetR family transcriptional regulator [Mycobacterium smegmatis str. MC2 155] gi|118170693|gb|ABK71589.1| transcriptional regulator, TetR family protein [Mycobacterium smegmatis str. MC2 155] Length=191 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 154/185 (84%), Positives = 170/185 (92%), Gaps = 0/185 (0%) Query 3 RPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRV 62 R +LSR++IV ALTFLDREGWD+LTINALA QLGTKGPSLYNHV SL+DLRR VR+RV Sbjct 5 RTTRLSRDTIVNAALTFLDREGWDALTINALANQLGTKGPSLYNHVHSLDDLRRTVRMRV 64 Query 63 IDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRG 122 IDDII+MLNRVG GR RDDAV+ MA AYRSYAHHHPGRYSAFTRMP G DDPEY+AAT+ Sbjct 65 IDDIISMLNRVGEGRTRDDAVIAMASAYRSYAHHHPGRYSAFTRMPFGDDDPEYSAATKA 124 Query 123 AAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLAA 182 AAAPVI VL+S+GL+GEQAFYAALEFWSALHGFVLLEMTGVMDD+DTDAVFTDM+LRLA+ Sbjct 125 AAAPVIEVLASFGLEGEQAFYAALEFWSALHGFVLLEMTGVMDDVDTDAVFTDMLLRLAS 184 Query 183 GMERR 187 GMERR Sbjct 185 GMERR 189 >gi|120402289|ref|YP_952118.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii PYR-1] gi|119955107|gb|ABM12112.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii PYR-1] Length=191 Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 148/185 (80%), Positives = 162/185 (88%), Gaps = 0/185 (0%) Query 3 RPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRV 62 R AKLSR++IV ALTFLDREGWD+LTINALA QLGTKGPSLYNHV SL+DLRR VR+ V Sbjct 7 RTAKLSRDAIVNAALTFLDREGWDALTINALANQLGTKGPSLYNHVHSLDDLRRTVRMHV 66 Query 63 IDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRG 122 + DII MLN VG GR DDAV+VMA AYRSYAHHHPGRYSAFTRMPLGGDDPE+T ATR Sbjct 67 VGDIIEMLNTVGKGRTPDDAVMVMASAYRSYAHHHPGRYSAFTRMPLGGDDPEFTEATRA 126 Query 123 AAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLAA 182 AAAPVI+VL ++GL+ E AFYAALEFWSA+HGFVLLEMTGVM IDTDAVFTDMV RLAA Sbjct 127 AAAPVISVLETFGLESESAFYAALEFWSAMHGFVLLEMTGVMSGIDTDAVFTDMVARLAA 186 Query 183 GMERR 187 GM+ R Sbjct 187 GMQLR 191 >gi|145225655|ref|YP_001136333.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK] gi|315446007|ref|YP_004078886.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1] gi|145218141|gb|ABP47545.1| transcriptional regulator, TetR family [Mycobacterium gilvum PYR-GCK] gi|315264310|gb|ADU01052.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1] Length=192 Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 152/186 (82%), Positives = 163/186 (88%), Gaps = 1/186 (0%) Query 3 RPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRV 62 R AKLSR+SIV ALTFLDREGWD+LTINALA QLGTKGPSLYNHV SL+DLRR VR+RV Sbjct 7 RTAKLSRDSIVNAALTFLDREGWDALTINALANQLGTKGPSLYNHVHSLDDLRRTVRMRV 66 Query 63 IDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPL-GGDDPEYTAATR 121 + DII MLN V GR DDAV+VMA AYRSYAHHHPGRYSAFTRMPL GGDDPE+T TR Sbjct 67 VGDIIDMLNTVAQGRNPDDAVVVMASAYRSYAHHHPGRYSAFTRMPLGGGDDPEFTEVTR 126 Query 122 GAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLA 181 AAAPVIAVLSSYGLD E FYAALEFWSA+HGFVLLEMTGVM+ IDTDAVFTDMV+RLA Sbjct 127 AAAAPVIAVLSSYGLDDEAGFYAALEFWSAMHGFVLLEMTGVMNGIDTDAVFTDMVMRLA 186 Query 182 AGMERR 187 AGM+ R Sbjct 187 AGMQTR 192 >gi|333989333|ref|YP_004521947.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601] gi|333485301|gb|AEF34693.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601] Length=179 Score = 293 bits (750), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 148/177 (84%), Positives = 162/177 (92%), Gaps = 0/177 (0%) Query 12 IVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDIITMLN 71 IV AL FLDREGWD+LTINALATQLGTKGPSLYNHV SL DLRRA+R+RVIDDI+ ML Sbjct 2 IVNAALNFLDREGWDALTINALATQLGTKGPSLYNHVHSLGDLRRAMRMRVIDDILEMLT 61 Query 72 RVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRGAAAPVIAVL 131 +VG GRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAA AAAPVI VL Sbjct 62 QVGQGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAATRAAAPVIEVL 121 Query 132 SSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMDDIDTDAVFTDMVLRLAAGMERRT 188 +SYGLDG++AF+AALEFW+A+HGFVLLEMTGVMD++DTDAVF DMV RLAAGM+ RT Sbjct 122 ASYGLDGDRAFHAALEFWAAMHGFVLLEMTGVMDNVDTDAVFADMVRRLAAGMDSRT 178 >gi|169630931|ref|YP_001704580.1| TetR family transcriptional regulator [Mycobacterium abscessus ATCC 19977] gi|169242898|emb|CAM63926.1| Putative transcriptional regulator, TetR family [Mycobacterium abscessus] Length=202 Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 105/188 (56%), Positives = 136/188 (73%), Gaps = 2/188 (1%) Query 2 ARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIR 61 AR +L+R+++V AL+FLDR GWD+LTINALA +LGTKGPSLYNHVDSL+DLR VR R Sbjct 14 ARATRLNRDAVVNAALSFLDRAGWDALTINALAVELGTKGPSLYNHVDSLDDLRHEVRDR 73 Query 62 VIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATR 121 V+ +I+ ML+ V +GR+ +DA+L MAGAYRSYAHHHPGRY+A TRMP T R Sbjct 74 VLAEIVGMLHTVSSGRSSEDAILAMAGAYRSYAHHHPGRYAALTRMPFLDAVNRPTIDAR 133 Query 122 GAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD--DIDTDAVFTDMVLR 179 A P + YGL+ + AF+A +E W+A+HGFV+LEMTG M ++D D F +MV R Sbjct 134 ELAKPATEAIGVYGLNEDTAFHAGVELWAAMHGFVMLEMTGFMAGIEMDPDTAFAEMVHR 193 Query 180 LAAGMERR 187 A+G+ R Sbjct 194 FASGLAER 201 >gi|88855983|ref|ZP_01130645.1| putative transcriptional regulator [marine actinobacterium PHSC20C1] gi|88814850|gb|EAR24710.1| putative transcriptional regulator [marine actinobacterium PHSC20C1] Length=189 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/174 (40%), Positives = 97/174 (56%), Gaps = 2/174 (1%) Query 5 AKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVID 64 A LS ++VE A LD +G +S+++ LA G K PSLY HVD + L+R + + Sbjct 4 AGLSTAAVVERAAQLLDEQGSESVSLADLAASFGVKIPSLYKHVDGVRGLQRGIMLSAKS 63 Query 65 DIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRGAA 124 D+ ++ + GRARDDA+ MA AYR++A HPG+Y R P+ DD + A + Sbjct 64 DLTAVMEQAAVGRARDDAIRGMAVAYRNWALRHPGQYPLTVRAPV-QDDADDVAVSTAIV 122 Query 125 APVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD-DIDTDAVFTDMV 177 A V VLS YGL + A A SALHGFV LE G + +D + F+ +V Sbjct 123 AVVFTVLSGYGLRDDDAVDATRFLRSALHGFVSLETGGAFELPVDRERSFSKLV 176 >gi|111021638|ref|YP_704610.1| TetR family transcriptional regulator [Rhodococcus jostii RHA1] gi|110821168|gb|ABG96452.1| possible transcriptional regulator, TetR family protein [Rhodococcus jostii RHA1] Length=200 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 59/178 (34%), Positives = 103/178 (58%), Gaps = 4/178 (2%) Query 3 RPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRV 62 R L+R+ +V+ A+ +D GW+ L++ +L+ +L SLYNHV +L+D+R AV++R Sbjct 10 RRRTLTRDKVVDAAIEIIDEHGWEQLSMTSLSARLNVVTASLYNHVRNLDDIRGAVQVRT 69 Query 63 IDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRG 122 + ++ L + GR D + + A+R++A HP RY T P+ D + +A Sbjct 70 MTELGAHLREIAMGRTGPDGLRALVDAHRAWATQHPHRYQTLTTSPVDRD--AFISAALD 127 Query 123 AAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVM-DDIDTDAVFTDMVLR 179 A + +L+S GL E AA+ ++A+HGFV+L T + D++D D+++ + VLR Sbjct 128 ANTALRTMLASCGLPPEDTLDAAVSIFAAMHGFVMLVNTDFLGDELDLDSIY-ESVLR 184 >gi|330470309|ref|YP_004408052.1| regulatory protein TetR [Verrucosispora maris AB-18-032] gi|328813280|gb|AEB47452.1| regulatory protein TetR [Verrucosispora maris AB-18-032] Length=183 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/151 (40%), Positives = 84/151 (56%), Gaps = 1/151 (0%) Query 12 IVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDIITMLN 71 +V A D G+ LT+ ALA +LG PSLY H+ + L + + ++ + Sbjct 1 MVREAAVLADEVGYQKLTLAALANRLGVALPSLYKHIKGADALAQKLSALTTAELAEEMT 60 Query 72 RVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRGAAAPVIAVL 131 AGR+R+DA+ +A AYRSYA HPGRY A R+P DP + AA+ A V A+L Sbjct 61 TAAAGRSREDALRAVATAYRSYARRHPGRYPAAQRVP-DPTDPAHVAASERAVGVVFAIL 119 Query 132 SSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 YG++G+ A A F +A+HGFV LE G Sbjct 120 RGYGIEGDSAVDGARMFRAAVHGFVALEAAG 150 >gi|226364175|ref|YP_002781957.1| TetR family transcriptional regulator [Rhodococcus opacus B4] gi|226242664|dbj|BAH53012.1| putative TetR family transcriptional regulator [Rhodococcus opacus B4] Length=200 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/178 (34%), Positives = 103/178 (58%), Gaps = 4/178 (2%) Query 3 RPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRV 62 R L+R+ +V+ A+ +D GW+ L++ +L+ +L SLYNHV +L+D+R AV++R Sbjct 10 RRRTLTRDKVVDAAIEIIDELGWEQLSMTSLSARLNVVTASLYNHVRNLDDIRGAVQVRT 69 Query 63 IDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRG 122 + ++ L + GR D + + A+R++A HP RY T P+ D + +A Sbjct 70 MTELGAHLREIAMGRTGPDGLRALVDAHRAWATAHPHRYQTLTTSPVDRD--AFISAALD 127 Query 123 AAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVM-DDIDTDAVFTDMVLR 179 A + +L+S GL E AA+ ++A+HGFV+L T + D++D DA++ + VLR Sbjct 128 ANTALRTMLASCGLPPEDTLDAAVSVFAAMHGFVMLVNTDFLGDELDLDAIY-ESVLR 184 >gi|300782767|ref|YP_003763058.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|299792281|gb|ADJ42656.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] Length=193 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/158 (38%), Positives = 87/158 (56%), Gaps = 1/158 (0%) Query 5 AKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVID 64 A L+ E++V+ A+ +D G + LT+ +A + G PSLY HV++L LRR + +RV+ Sbjct 5 AGLTTEAVVDLAIALVDESGPEELTLAKIAHRAGVAAPSLYKHVENLAGLRRLIDLRVVK 64 Query 65 DIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRGAA 124 ++ L GR DAV +A AYR Y +HP R A T P G D E + AT A Sbjct 65 EMAEALRTAATGREGGDAVAAIADAYRHYLQNHPHRTGALTAAPDRG-DAELSTATHAVA 123 Query 125 APVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 V AVL +G D ++ +A +A+HGF LE +G Sbjct 124 EVVFAVLRPFGFDHARSVHATRCIRAAVHGFAGLEASG 161 >gi|238061256|ref|ZP_04605965.1| transcriptional regulator [Micromonospora sp. ATCC 39149] gi|237883067|gb|EEP71895.1| transcriptional regulator [Micromonospora sp. ATCC 39149] Length=190 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/158 (40%), Positives = 86/158 (55%), Gaps = 1/158 (0%) Query 5 AKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVID 64 A L+++++V A D G D LT+ ALA +LG PSLY HV + L + + Sbjct 4 AGLNQQAVVREAARLADEVGLDRLTLAALAGRLGVALPSLYKHVKGADALTQKLAALATA 63 Query 65 DIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRGAA 124 ++ GRA DA+ +A A+R YA +PGRYSA R P G DP++ AA+ A Sbjct 64 ELADAFTAAAVGRAGGDALRAVAAAFRDYARRYPGRYSAAQRAPDAG-DPDHVAASERAV 122 Query 125 APVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + A+L YGLDG+ A A SALHGF+ LE G Sbjct 123 GAIYAILRGYGLDGDAAVDATRMLRSALHGFLTLEAAG 160 >gi|297561984|ref|YP_003680958.1| TetR family transcriptional regulator [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846432|gb|ADH68452.1| transcriptional regulator, TetR family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=202 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/171 (41%), Positives = 92/171 (54%), Gaps = 13/171 (7%) Query 5 AKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVID 64 A L+ + E A D EG+DSL++ A+A +LG PSLY HVD L LRR V + + Sbjct 4 AGLTPAVVAEEAARLSDEEGFDSLSLAAVAKRLGVATPSLYKHVDGLTGLRREVALLGAN 63 Query 65 DIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMP-LGGDDPEYTAATRGA 123 I + R GR+ +A+ A AYR YAH HPG Y+A ++P L G E A Sbjct 64 GIGEEVQRAAVGRSGPEALRATADAYRRYAHAHPGHYAALQQLPVLAGARAEL------A 117 Query 124 AAPV---IAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMT---GVMDDID 168 PV AVL +G+ EQA +A S+LHGFV LE G+ +D+D Sbjct 118 TDPVRVLAAVLRGFGIAEEQAVHAIRALRSSLHGFVDLETRGGFGLPEDVD 168 >gi|126650754|ref|ZP_01722970.1| probable transcriptional regulator, TetR family protein [Bacillus sp. B14905] gi|126592419|gb|EAZ86437.1| probable transcriptional regulator, TetR family protein [Bacillus sp. B14905] Length=194 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/162 (35%), Positives = 85/162 (53%), Gaps = 1/162 (0%) Query 1 VARPAKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRI 60 ++R KL IV+ A+ +D G D L+I LA +L + PSLYNH+D L +L++ + I Sbjct 1 MSRRMKLDLSIIVQKAIELVDEHGLDQLSIGLLAEKLEVRPPSLYNHLDGLPELKQKLAI 60 Query 61 RVIDDIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAAT 120 + + + + + AGR+ DDA+ ++ AY + HPG Y A TR P +D + A Sbjct 61 QGVKSLQASMLQAAAGRSGDDAIRAISKAYIQFVREHPGLYDASTRFP-DANDLDLQQAQ 119 Query 121 RGAAAPVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 V+ VL +Y L E A + S LHGF +E G Sbjct 120 ESIVQLVLRVLETYHLQDEMAIHMVRGLRSILHGFTSIEQLG 161 >gi|229062670|ref|ZP_04199979.1| Transcriptional regulator [Bacillus cereus AH603] gi|228716640|gb|EEL68337.1| Transcriptional regulator [Bacillus cereus AH603] Length=185 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/167 (37%), Positives = 84/167 (51%), Gaps = 10/167 (5%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA +LG + PSLYNHV SL+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQGVTLASLAQRLGVRSPSLYNHVKSLQDVRKNLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNRLEETAEGKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGGGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD---DIDT 169 + VL YGL+GE A +A F S HGF +E G D+DT Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQGGFGLPLDLDT 167 >gi|42784186|ref|NP_981433.1| transcriptional regulator, putative [Bacillus cereus ATCC 10987] gi|42740117|gb|AAS44041.1| transcriptional regulator, putative [Bacillus cereus ATCC 10987] Length=185 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/157 (37%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKHLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 YNKLEEAAEGKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|229032641|ref|ZP_04188604.1| Transcriptional regulator [Bacillus cereus AH1271] gi|228728640|gb|EEL79653.1| Transcriptional regulator [Bacillus cereus AH1271] Length=185 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 57/157 (37%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKNLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L GR D+A+ + +Y ++ HPG Y A F R D E A G Sbjct 67 HNRLEEAAEGRCMDEAIHALGESYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVT 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLHVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|229175699|ref|ZP_04303207.1| Transcriptional regulator [Bacillus cereus MM3] gi|228607840|gb|EEK65154.1| Transcriptional regulator [Bacillus cereus MM3] Length=185 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 57/157 (37%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKNLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 YNRLEEAAEGKRMDEAIHALGEAYVAFVRKHPGMYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLHVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|118480089|ref|YP_897240.1| TetR family transcriptional regulator [Bacillus thuringiensis str. Al Hakam] gi|196043966|ref|ZP_03111203.1| putative transcriptional regulator [Bacillus cereus 03BB108] gi|225866982|ref|YP_002752360.1| putative transcriptional regulator [Bacillus cereus 03BB102] gi|229187244|ref|ZP_04314389.1| Transcriptional regulator [Bacillus cereus BGSC 6E1] gi|118419314|gb|ABK87733.1| transcriptional regulator, TetR family [Bacillus thuringiensis str. Al Hakam] gi|196025302|gb|EDX63972.1| putative transcriptional regulator [Bacillus cereus 03BB108] gi|225788666|gb|ACO28883.1| putative transcriptional regulator [Bacillus cereus 03BB102] gi|228596254|gb|EEK53929.1| Transcriptional regulator [Bacillus cereus BGSC 6E1] Length=182 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/167 (36%), Positives = 82/167 (50%), Gaps = 10/167 (5%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLPKIVETAAEIADTNGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKHLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNRLEEAAKGKCTDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD---DIDT 169 + VL YGL+GE A +A F S HGF +E G D+DT Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQGGFGLPLDLDT 167 >gi|340524141|gb|AEK39346.1| TetR family transcriptional regulator [Amycolatopsis mediterranei S699] Length=182 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/151 (38%), Positives = 82/151 (55%), Gaps = 1/151 (0%) Query 12 IVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDIITMLN 71 +V+ A+ +D G + LT+ +A + G PSLY HV++L LRR + +RV+ ++ L Sbjct 1 MVDLAIALVDESGPEELTLAKIAHRAGVAAPSLYKHVENLAGLRRLIDLRVVKEMAEALR 60 Query 72 RVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRGAAAPVIAVL 131 GR DAV +A AYR Y +HP R A T P G D E + AT A V AVL Sbjct 61 TAATGREGGDAVAAIADAYRHYLQNHPHRTGALTAAPDRG-DAELSTATHAVAEVVFAVL 119 Query 132 SSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 +G D ++ +A +A+HGF LE +G Sbjct 120 RPFGFDHARSVHATRCIRAAVHGFAGLEASG 150 >gi|315503618|ref|YP_004082505.1| regulatory protein TetR [Micromonospora sp. L5] gi|315410237|gb|ADU08354.1| regulatory protein TetR [Micromonospora sp. L5] Length=189 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 74/183 (41%), Positives = 101/183 (56%), Gaps = 6/183 (3%) Query 5 AKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVID 64 A L+ ++V A D G++ LT+ ALA +LG PSLY HV ++ L + + + Sbjct 4 AGLTPATVVREAAALADEVGYEKLTLAALAARLGVALPSLYKHVRGVDALHQKLAVLATA 63 Query 65 DIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRGAA 124 +I +L AGR+ DA+ +A AYR YA HPGRY A R P DPE+ AA + A Sbjct 64 EIADVLTAAAAGRSGGDALRAVAAAYREYARQHPGRYPAAQRAP-DPADPEHLAAGQRAV 122 Query 125 APVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD-DIDTDAVFTDMVLRLAAG 183 V A+L YGLDG+ A A F +A+HGFV LE G DTD F ++V AG Sbjct 123 GAVRAILLGYGLDGDAATDAIRMFRAAVHGFVALEAAGGFGLPRDTDRSFGELV----AG 178 Query 184 MER 186 ++R Sbjct 179 LDR 181 >gi|302870106|ref|YP_003838743.1| regulatory protein TetR [Micromonospora aurantiaca ATCC 27029] gi|302572965|gb|ADL49167.1| regulatory protein TetR [Micromonospora aurantiaca ATCC 27029] Length=189 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 74/183 (41%), Positives = 100/183 (55%), Gaps = 6/183 (3%) Query 5 AKLSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVID 64 A L+ ++V A D G++ LT+ ALA +LG PSLY HV + L + + + Sbjct 4 AGLTPATVVREAAALADEVGYEKLTLAALAARLGVALPSLYKHVRGADALHQKLAVLATA 63 Query 65 DIITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSAFTRMPLGGDDPEYTAATRGAA 124 +I +L AGR+ DA+ +A AYR YA HPGRY A R P DPE+ AA + A Sbjct 64 EIADVLTAAAAGRSGGDALRAVAAAYREYARQHPGRYPAAQRAPDPA-DPEHLAAGQRAV 122 Query 125 APVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD-DIDTDAVFTDMVLRLAAG 183 V A+L YGLDG+ A A F +A+HGFV LE G DTD F +M+ AG Sbjct 123 GAVRAILLGYGLDGDAATDAIRMFRAAVHGFVALEAAGGFGLPRDTDRSFDEMI----AG 178 Query 184 MER 186 ++R Sbjct 179 LDR 181 >gi|229199149|ref|ZP_04325832.1| Transcriptional regulator [Bacillus cereus m1293] gi|228584420|gb|EEK42555.1| Transcriptional regulator [Bacillus cereus m1293] Length=185 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/167 (36%), Positives = 82/167 (50%), Gaps = 10/167 (5%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKHLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 YNKLEEAAEGKWMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD---DIDT 169 + VL YGL+GE A +A F S HGF +E G D+DT Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEKQGGFGLPLDLDT 167 >gi|228955267|ref|ZP_04117275.1| Transcriptional regulator [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804400|gb|EEM51011.1| Transcriptional regulator [Bacillus thuringiensis serovar kurstaki str. T03a001] Length=182 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/167 (36%), Positives = 83/167 (50%), Gaps = 10/167 (5%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKNLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNRLEEATEGKYTDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD---DIDT 169 + VL YGL+GE A +A F S HGF +E G D+DT Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQGGFGLPLDLDT 167 >gi|324328936|gb|ADY24196.1| transcriptional regulator, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length=185 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/157 (37%), Positives = 77/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ IVE A D G +T+ +LA LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLPKIVETAAEIADTNGIQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKHLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 YNKLEEAAEGKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|52140530|ref|YP_086301.1| TetR family transcriptional regulator [Bacillus cereus E33L] gi|51973999|gb|AAU15549.1| probable transcriptional regulator, TetR family [Bacillus cereus E33L] Length=182 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/157 (37%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLPKIVETAAEIADTNGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKHLGIYGIQQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNTLEEAAEGKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|218906201|ref|YP_002454035.1| putative transcriptional regulator [Bacillus cereus AH820] gi|228930032|ref|ZP_04093042.1| Transcriptional regulator [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229124542|ref|ZP_04253727.1| Transcriptional regulator [Bacillus cereus 95/8201] gi|218535587|gb|ACK87985.1| putative transcriptional regulator [Bacillus cereus AH820] gi|228658882|gb|EEL14537.1| Transcriptional regulator [Bacillus cereus 95/8201] gi|228829531|gb|EEM75158.1| Transcriptional regulator [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length=182 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/167 (36%), Positives = 83/167 (50%), Gaps = 10/167 (5%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ IVE A+ D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLPKIVETAVEIADANGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKHLGIYGIQQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNRLEEAAEGKRMDEAIHALGEAYVAFVRTHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD---DIDT 169 + VL YGL+GE A +A F S HGF +E G D+DT Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQGGFGLPLDLDT 167 >gi|228948732|ref|ZP_04111010.1| Transcriptional regulator [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228811039|gb|EEM57382.1| Transcriptional regulator [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length=182 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/167 (36%), Positives = 82/167 (50%), Gaps = 10/167 (5%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLPKIVETAAEIADTNGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKHLGIYGIQQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNRLEEAAEGKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD---DIDT 169 + VL YGL+GE A +A F S HGF +E G D+DT Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQGGFGLPLDLDT 167 >gi|49481059|ref|YP_039025.1| TetR family transcriptional regulator [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332615|gb|AAT63261.1| probable transcriptional regulator, TetR family [Bacillus thuringiensis serovar konkukian str. 97-27] Length=185 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/167 (36%), Positives = 82/167 (50%), Gaps = 10/167 (5%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLPKIVETAAEIADANGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKHLGIYGIQQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNRLEEAAEGKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTGVMD---DIDT 169 + VL YGL+GE A +A F S HGF +E G D+DT Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQGGFGLPLDLDT 167 >gi|229020240|ref|ZP_04177012.1| Transcriptional regulator [Bacillus cereus AH1273] gi|229026465|ref|ZP_04182822.1| Transcriptional regulator [Bacillus cereus AH1272] gi|228734928|gb|EEL85566.1| Transcriptional regulator [Bacillus cereus AH1272] gi|228741080|gb|EEL91306.1| Transcriptional regulator [Bacillus cereus AH1273] Length=185 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/157 (36%), Positives = 79/157 (51%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA LG + PSLYNHV L+D+R+ + + I ++ Sbjct 7 LTLQKIVETAAEIADINGIQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKNLGMYGIKEL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNRLEEAAEGKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLHVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|229153193|ref|ZP_04281372.1| Transcriptional regulator [Bacillus cereus m1550] gi|228630292|gb|EEK86942.1| Transcriptional regulator [Bacillus cereus m1550] Length=182 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/157 (36%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKNLGIYGIQQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L + D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNKLEEAAEDKQMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLRVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|229181298|ref|ZP_04308628.1| Transcriptional regulator [Bacillus cereus 172560W] gi|228602191|gb|EEK59682.1| Transcriptional regulator [Bacillus cereus 172560W] Length=182 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/157 (36%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETATEIADTNGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKNLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L + D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNKLEEAAEDKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|229072490|ref|ZP_04205692.1| Transcriptional regulator [Bacillus cereus F65185] gi|228710466|gb|EEL62439.1| Transcriptional regulator [Bacillus cereus F65185] Length=182 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/157 (36%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKNLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L + D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNKLEEAAEDKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|206970070|ref|ZP_03231023.1| putative transcriptional regulator [Bacillus cereus AH1134] gi|206734647|gb|EDZ51816.1| putative transcriptional regulator [Bacillus cereus AH1134] Length=182 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/157 (36%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADANGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKNLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L + D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNKLEEAAEDKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|228923733|ref|ZP_04087011.1| Transcriptional regulator [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835862|gb|EEM81225.1| Transcriptional regulator [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length=182 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/157 (36%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQEVTLASLAKRLGIRSPSLYNHVKGLQDVRKNLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L + D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNKLEEAAEDKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|163942723|ref|YP_001647607.1| TetR family transcriptional regulator [Bacillus weihenstephanensis KBAB4] gi|229135835|ref|ZP_04264604.1| Transcriptional regulator [Bacillus cereus BDRD-ST196] gi|163864920|gb|ABY45979.1| putative transcriptional regulator, TetR family [Bacillus weihenstephanensis KBAB4] gi|228647624|gb|EEL03690.1| Transcriptional regulator [Bacillus cereus BDRD-ST196] Length=185 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/157 (36%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA LG + PSLYNHV L+D+R+ + + I + Sbjct 7 LTLQKIVETAAEIADINGIQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKNLGMYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L G+ D+A+ + AY ++ HPG Y A F R + E A G Sbjct 67 HNRLEEAAEGKCMDEAIHALGEAYVAFVRKHPGLYEATFLR------EEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLHVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|218232056|ref|YP_002369804.1| putative transcriptional regulator [Bacillus cereus B4264] gi|218160013|gb|ACK60005.1| putative transcriptional regulator [Bacillus cereus B4264] Length=182 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/157 (36%), Positives = 78/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA +LG + PSLYNHV L+D+R+ + I I + Sbjct 7 LTLQKIVETAAEIADTNGIQEVTLASLAQRLGIRSPSLYNHVKGLQDVRKHLGIYGIKQL 66 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L + D+A+ + AY ++ HPG Y A F R D E A G Sbjct 67 HNKLEEAAEDKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 120 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 121 LCLRVLQQYGLEGENALHATRGFRSICHGFASIEQQG 157 >gi|30023040|ref|NP_834671.1| TetR family transcriptional regulator [Bacillus cereus ATCC 14579] gi|29898600|gb|AAP11872.1| Transcriptional regulator, TetR family [Bacillus cereus ATCC 14579] Length=183 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/157 (36%), Positives = 77/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA LG + PSLYNHV L+D+R+ + I I + Sbjct 8 LTLQKIVETAAEIADANGVQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKNLGIYGIKKL 67 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L + D+A+ + AY ++ HPG Y A F R D E A G Sbjct 68 HNRLEEAAEDKRMDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 121 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 122 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQG 158 >gi|71042350|pdb|1ZK8|A Chain A, Crystal Structure Of Transcriptional Regulator From Bacillus Cereus Atcc 14579 gi|71042351|pdb|1ZK8|B Chain B, Crystal Structure Of Transcriptional Regulator From Bacillus Cereus Atcc 14579 Length=183 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/157 (36%), Positives = 77/157 (50%), Gaps = 7/157 (4%) Query 7 LSRESIVEGALTFLDREGWDSLTINALATQLGTKGPSLYNHVDSLEDLRRAVRIRVIDDI 66 L+ + IVE A D G +T+ +LA LG + PSLYNHV L+D+R+ + I I + Sbjct 8 LTLQKIVETAAEIADANGVQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKNLGIYGIKKL 67 Query 67 ITMLNRVGAGRARDDAVLVMAGAYRSYAHHHPGRYSA-FTRMPLGGDDPEYTAATRGAAA 125 L + D+A+ + AY ++ HPG Y A F R D E A G Sbjct 68 HNRLEEAAEDKRXDEAIHALGEAYVAFVRKHPGLYEATFLR------DEEVRKAGDGIVK 121 Query 126 PVIAVLSSYGLDGEQAFYAALEFWSALHGFVLLEMTG 162 + VL YGL+GE A +A F S HGF +E G Sbjct 122 LCLQVLQQYGLEGENALHATRGFRSICHGFASIEQQG 158 Lambda K H 0.321 0.135 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 205411802368 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40