BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0686 Length=265 Score E Sequences producing significant alignments: (Bits) Value gi|15607826|ref|NP_215200.1| hypothetical protein Rv0686 [Mycoba... 531 4e-149 gi|340625705|ref|YP_004744157.1| hypothetical protein MCAN_06871... 528 3e-148 gi|31791870|ref|NP_854363.1| hypothetical protein Mb0705 [Mycoba... 528 3e-148 gi|240167684|ref|ZP_04746343.1| hypothetical protein MkanA1_0011... 446 2e-123 gi|183981036|ref|YP_001849327.1| hypothetical protein MMAR_1015 ... 423 1e-116 gi|118616551|ref|YP_904883.1| hypothetical protein MUL_0767 [Myc... 421 4e-116 gi|296168541|ref|ZP_06850345.1| conserved hypothetical protein [... 414 9e-114 gi|254822100|ref|ZP_05227101.1| hypothetical protein MintA_19352... 406 2e-111 gi|41410243|ref|NP_963079.1| hypothetical protein MAP4145 [Mycob... 405 4e-111 gi|254776923|ref|ZP_05218439.1| hypothetical protein MaviaA2_199... 404 5e-111 gi|336460619|gb|EGO39511.1| hypothetical protein MAPs_38870 [Myc... 403 1e-110 gi|118464256|ref|YP_883622.1| hypothetical protein MAV_4487 [Myc... 403 2e-110 gi|342861774|ref|ZP_08718419.1| hypothetical protein MCOL_22910 ... 402 4e-110 gi|120402296|ref|YP_952125.1| hypothetical protein Mvan_1285 [My... 333 1e-89 gi|145225649|ref|YP_001136327.1| hypothetical protein Mflv_5073 ... 329 3e-88 gi|108797962|ref|YP_638159.1| hypothetical protein Mmcs_0989 [My... 328 4e-88 gi|118467727|ref|YP_885791.1| hypothetical protein MSMEG_1406 [M... 321 8e-86 gi|333989338|ref|YP_004521952.1| hypothetical protein JDM601_069... 319 2e-85 gi|169630924|ref|YP_001704573.1| hypothetical protein MAB_3845c ... 236 2e-60 gi|262203665|ref|YP_003274873.1| hypothetical protein Gbro_3801 ... 163 2e-38 gi|312198821|ref|YP_004018882.1| hypothetical protein FraEuI1c_5... 158 8e-37 gi|118616481|ref|YP_904813.1| hypothetical protein MUL_0679 [Myc... 59.3 6e-07 gi|118473961|ref|YP_887808.1| hypothetical protein MSMEG_3504 [M... 58.5 1e-06 gi|240169263|ref|ZP_04747922.1| hypothetical protein MkanA1_0811... 58.5 1e-06 gi|120403976|ref|YP_953805.1| hypothetical protein Mvan_2994 [My... 57.0 3e-06 gi|145223862|ref|YP_001134540.1| hypothetical protein Mflv_3275 ... 52.4 7e-05 gi|254412146|ref|ZP_05025921.1| hypothetical protein MC7420_5535... 41.6 0.13 gi|158336902|ref|YP_001518077.1| hypothetical protein AM1_3773 [... 40.8 0.19 gi|111220975|ref|YP_711769.1| hypothetical protein FRAAL1522 [Fr... 39.7 0.46 gi|332708555|ref|ZP_08428529.1| putative membrane protein [Lyngb... 39.7 0.52 gi|54027505|ref|YP_121747.1| hypothetical protein nfa55310 [Noca... 39.3 0.63 gi|335035656|ref|ZP_08528991.1| hypothetical protein AGRO_2990 [... 38.5 0.98 gi|257058510|ref|YP_003136398.1| hypothetical protein Cyan8802_0... 38.5 0.98 gi|149923650|ref|ZP_01912046.1| hypothetical protein PPSIR1_1691... 38.5 1.0 gi|218245474|ref|YP_002370845.1| hypothetical protein PCC8801_06... 38.5 1.0 gi|86739624|ref|YP_480024.1| hypothetical protein Francci3_0911 ... 38.1 1.4 gi|310642496|ref|YP_003947254.1| hypothetical protein [Paenibaci... 38.1 1.4 gi|111020258|ref|YP_703230.1| hypothetical protein RHA1_ro03269 ... 37.7 1.7 gi|256394390|ref|YP_003115954.1| hypothetical protein Caci_5254 ... 37.7 2.0 gi|315302560|ref|ZP_07873388.1| conserved hypothetical protein [... 37.4 2.1 gi|269958061|ref|YP_003327850.1| hypothetical protein Xcel_3292 ... 37.4 2.3 gi|17230469|ref|NP_487017.1| hypothetical protein all2977 [Nosto... 37.4 2.5 gi|255261575|ref|ZP_05340917.1| Trk system potassium uptake prot... 37.0 3.0 gi|22298034|ref|NP_681281.1| transcriptional regulator [Thermosy... 37.0 3.2 gi|291298429|ref|YP_003509707.1| hypothetical protein Snas_0903 ... 37.0 3.4 gi|158317385|ref|YP_001509893.1| hypothetical protein Franean1_5... 36.6 3.6 gi|37520983|ref|NP_924360.1| hypothetical protein gll1414 [Gloeo... 36.6 3.7 gi|325473276|gb|EGC76471.1| ABC transporter [Treponema denticola... 36.6 3.7 gi|330825625|ref|YP_004388928.1| hypothetical protein Alide2_306... 36.2 4.7 gi|170078841|ref|YP_001735479.1| hypothetical protein SYNPCC7002... 36.2 5.2 >gi|15607826|ref|NP_215200.1| hypothetical protein Rv0686 [Mycobacterium tuberculosis H37Rv] gi|15840089|ref|NP_335126.1| hypothetical protein MT0714 [Mycobacterium tuberculosis CDC1551] gi|148660461|ref|YP_001281984.1| hypothetical protein MRA_0695 [Mycobacterium tuberculosis H37Ra] 71 more sequence titles Length=265 Score = 531 bits (1368), Expect = 4e-149, Method: Compositional matrix adjust. Identities = 264/265 (99%), Positives = 265/265 (100%), Gaps = 0/265 (0%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY Sbjct 1 MLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA Sbjct 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL Sbjct 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL 240 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL Sbjct 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL 240 Query 241 ESLRASGAVNAAEYESKRAQIISEI 265 ESLRASGAVNAAEYESKRAQIISEI Sbjct 241 ESLRASGAVNAAEYESKRAQIISEI 265 >gi|340625705|ref|YP_004744157.1| hypothetical protein MCAN_06871 [Mycobacterium canettii CIPT 140010059] gi|340003895|emb|CCC43027.1| putative membrane protein [Mycobacterium canettii CIPT 140010059] Length=265 Score = 528 bits (1361), Expect = 3e-148, Method: Compositional matrix adjust. Identities = 263/265 (99%), Positives = 264/265 (99%), Gaps = 0/265 (0%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGL ITVADVLVALALTNY Sbjct 1 MLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLSITVADVLVALALTNY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA Sbjct 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL Sbjct 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL 240 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL Sbjct 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL 240 Query 241 ESLRASGAVNAAEYESKRAQIISEI 265 ESLRASGAVNAAEYESKRAQIISEI Sbjct 241 ESLRASGAVNAAEYESKRAQIISEI 265 >gi|31791870|ref|NP_854363.1| hypothetical protein Mb0705 [Mycobacterium bovis AF2122/97] gi|121636607|ref|YP_976830.1| hypothetical protein BCG_0735 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989079|ref|YP_002643766.1| hypothetical protein JTY_0705 [Mycobacterium bovis BCG str. Tokyo 172] gi|31617457|emb|CAD93567.1| PROBABLE MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121492254|emb|CAL70721.1| Probable membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772192|dbj|BAH24998.1| hypothetical protein JTY_0705 [Mycobacterium bovis BCG str. Tokyo 172] gi|341600623|emb|CCC63293.1| probable membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=265 Score = 528 bits (1361), Expect = 3e-148, Method: Compositional matrix adjust. Identities = 263/265 (99%), Positives = 264/265 (99%), Gaps = 0/265 (0%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY Sbjct 1 MLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAKTAAKTAALERSGVLALAQ TGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA Sbjct 61 GAKTAAKTAALERSGVLALAQSTGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL Sbjct 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL 240 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL Sbjct 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL 240 Query 241 ESLRASGAVNAAEYESKRAQIISEI 265 ESLRASGAVNAAEYESKRAQIISEI Sbjct 241 ESLRASGAVNAAEYESKRAQIISEI 265 >gi|240167684|ref|ZP_04746343.1| hypothetical protein MkanA1_00110 [Mycobacterium kansasii ATCC 12478] Length=266 Score = 446 bits (1146), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 230/266 (87%), Positives = 251/266 (95%), Gaps = 1/266 (0%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARYIKMQLLVLLCGGLVGPIFL+VYFTLGLGSL+SWMFYVGL+ITVADVL+ALALTN+ Sbjct 1 MLARYIKMQLLVLLCGGLVGPIFLIVYFTLGLGSLLSWMFYVGLLITVADVLIALALTNW 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 G KTAAKTA LE+ GVLALAQITGL+ETGTRINDQP+VKVHLHI+GPGI PFD+EDRVIA Sbjct 61 GVKTAAKTAELEQRGVLALAQITGLTETGTRINDQPVVKVHLHIAGPGIVPFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNLTARKLVVLV+P TQQYLIDWERSALVNGL+PAQFT+AEDNKTYDLSGQ GPL Sbjct 121 SVTRLGNLTARKLVVLVDPTTQQYLIDWERSALVNGLLPAQFTLAEDNKTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPA-SQGSIAERLAE 239 MEILQILKAN +PLNRMVDIRSNPALRQQ+QAVVRRAAE+QAP ++PA SQ SIAERL E Sbjct 181 MEILQILKANGIPLNRMVDIRSNPALRQQIQAVVRRAAEQQAPGSQPAGSQASIAERLQE 240 Query 240 LESLRASGAVNAAEYESKRAQIISEI 265 LESLRASG VN EY S+RAQII+EI Sbjct 241 LESLRASGVVNDQEYASRRAQIIAEI 266 >gi|183981036|ref|YP_001849327.1| hypothetical protein MMAR_1015 [Mycobacterium marinum M] gi|183174362|gb|ACC39472.1| conserved membrane protein [Mycobacterium marinum M] Length=269 Score = 423 bits (1088), Expect = 1e-116, Method: Compositional matrix adjust. Identities = 224/269 (84%), Positives = 246/269 (92%), Gaps = 4/269 (1%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARY+KMQLLVLLCGGLVGPIFL+VYF LG+GSL+SWM YVGL+ITVADVL+ALALTN+ Sbjct 1 MLARYLKMQLLVLLCGGLVGPIFLIVYFALGVGSLLSWMLYVGLLITVADVLIALALTNF 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAK+AAK+A LE+SGVLALAQITGL+ETGTRIND+PLVKVHLHISGPGI FD+EDRVIA Sbjct 61 GAKSAAKSAELEQSGVLALAQITGLTETGTRINDRPLVKVHLHISGPGIAAFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNLTARKLVVLVNP TQ+YLIDWERSALVNGLVPAQFTVAEDN+TYDLSGQ GPL Sbjct 121 SVTRLGNLTARKLVVLVNPTTQEYLIDWERSALVNGLVPAQFTVAEDNRTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAA----EPASQGSIAER 236 MEILQILKAN +PLNRMVDIRSNP LRQQ+QAVVRRAA++Q PA A Q SIAER Sbjct 181 MEILQILKANGIPLNRMVDIRSNPVLRQQIQAVVRRAAQQQMPAGAAQPSAAPQASIAER 240 Query 237 LAELESLRASGAVNAAEYESKRAQIISEI 265 L ELESL ASGA+NA EY S+RAQIISEI Sbjct 241 LQELESLHASGALNAQEYASRRAQIISEI 269 >gi|118616551|ref|YP_904883.1| hypothetical protein MUL_0767 [Mycobacterium ulcerans Agy99] gi|118568661|gb|ABL03412.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=269 Score = 421 bits (1083), Expect = 4e-116, Method: Compositional matrix adjust. Identities = 221/269 (83%), Positives = 248/269 (93%), Gaps = 4/269 (1%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARY+KMQLLVLLCGGLVGPIFL+VYF L +GSL+SWM YVGL+ITVADVL+ALALT++ Sbjct 1 MLARYLKMQLLVLLCGGLVGPIFLIVYFALDVGSLLSWMLYVGLLITVADVLIALALTSF 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 AK+AAK+A LE+SGVLALAQITGL+ETGTRIND+PLVKVHLHISG GI FD+EDRVIA Sbjct 61 DAKSAAKSAELEQSGVLALAQITGLTETGTRINDRPLVKVHLHISGSGIAAFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNLTARKLVVLVNPAT++YLIDWERSALVNGLVPAQFTVAEDN+TYDLSGQ GPL Sbjct 121 SVTRLGNLTARKLVVLVNPATREYLIDWERSALVNGLVPAQFTVAEDNRTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAP--AAEPAS--QGSIAER 236 MEILQILKAN +PLNRMVDIRSNP LRQQ+QAVVRRAA++Q P AA+P++ Q SIAER Sbjct 181 MEILQILKANGIPLNRMVDIRSNPVLRQQIQAVVRRAAQQQMPAGAAQPSATPQASIAER 240 Query 237 LAELESLRASGAVNAAEYESKRAQIISEI 265 L ELESL ASGA+NA EY S+RAQIISEI Sbjct 241 LQELESLHASGALNAQEYASRRAQIISEI 269 >gi|296168541|ref|ZP_06850345.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896604|gb|EFG76243.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=275 Score = 414 bits (1063), Expect = 9e-114, Method: Compositional matrix adjust. Identities = 209/276 (76%), Positives = 238/276 (87%), Gaps = 12/276 (4%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARY+K QL+VLLCGGLVGPIFL+VYFTLGLGSL+ WMFYVGL++TVADVL+ALAL NY Sbjct 1 MLARYLKAQLVVLLCGGLVGPIFLIVYFTLGLGSLLQWMFYVGLLVTVADVLIALALANY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GA ++AK AALE+SGVLALAQITG++ETGT IN+Q +VKV LHISGPG PFD+EDRVIA Sbjct 61 GANSSAKNAALEQSGVLALAQITGVTETGTWINNQQVVKVQLHISGPGFLPFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNL+ARK+VVLVNP T +Y IDWERSALVNGLVPAQFTVAEDN+TYDLSGQ GPL Sbjct 121 SVTRLGNLSARKVVVLVNPTTNEYRIDWERSALVNGLVPAQFTVAEDNQTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQ-----------APAAEPAS 229 MEILQILKANNVPL+RMVDIRSNP LRQQ+QAVVRRAA++ AP P Sbjct 181 MEILQILKANNVPLDRMVDIRSNPVLRQQIQAVVRRAAQQAPAAQPASAGGPAPVVTP-P 239 Query 230 QGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 Q SIA+RL ELE+LRASGA+ EY S+RAQII+EI Sbjct 240 QPSIAQRLQELETLRASGALTDQEYNSRRAQIIAEI 275 >gi|254822100|ref|ZP_05227101.1| hypothetical protein MintA_19352 [Mycobacterium intracellulare ATCC 13950] Length=282 Score = 406 bits (1043), Expect = 2e-111, Method: Compositional matrix adjust. Identities = 207/282 (74%), Positives = 235/282 (84%), Gaps = 17/282 (6%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARY+K QL+VLLCGGLVGPIFLVVYF +GL SL+ WMFYVGL+IT ADVL+ALAL NY Sbjct 1 MLARYLKAQLIVLLCGGLVGPIFLVVYFVMGLDSLLQWMFYVGLLITAADVLIALALANY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAKT+AK AALE+SGVLALAQITG++ETGT +N+Q +VKVHLHI+GPG+ PFD+EDRVIA Sbjct 61 GAKTSAKVAALEQSGVLALAQITGITETGTWVNNQQVVKVHLHIAGPGLLPFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNL ARK+VVLVNP T +Y IDWERSALVNGLVPAQFTVAEDN+TYDLSGQ GPL Sbjct 121 SVTRLGNLNARKVVVLVNPTTNEYRIDWERSALVNGLVPAQFTVAEDNRTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPAS----------- 229 MEILQILKANNVPLNRMVDIRSNPALR Q+QAVVRRA E+Q+ AA+PA Sbjct 181 MEILQILKANNVPLNRMVDIRSNPALRGQIQAVVRRAVEQQSSAAQPAPGAPPSAGAAPS 240 Query 230 ------QGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 + SIA RL EL L ASGA+ EY S+RA II+EI Sbjct 241 AVVTPPEPSIAARLQELNDLHASGALTDQEYNSRRAAIIAEI 282 >gi|41410243|ref|NP_963079.1| hypothetical protein MAP4145 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399077|gb|AAS06695.1| hypothetical protein MAP_4145 [Mycobacterium avium subsp. paratuberculosis K-10] Length=282 Score = 405 bits (1041), Expect = 4e-111, Method: Compositional matrix adjust. Identities = 204/283 (73%), Positives = 230/283 (82%), Gaps = 19/283 (6%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARY+K QL+VLLCGGLVGPIFLVVYFTLGLGSL+ WMFYVGL+ITVADVL+ALAL NY Sbjct 1 MLARYLKAQLVVLLCGGLVGPIFLVVYFTLGLGSLLQWMFYVGLLITVADVLIALALANY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAK++ K AALE++GVLALAQITG++ETGT +N+Q +VKVHLHI+GPG+ PFD+EDRVIA Sbjct 61 GAKSSEKLAALEQNGVLALAQITGITETGTWVNNQQVVKVHLHIAGPGLVPFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNL ARK+VVLVNP T +Y IDWERSALVNGLVPAQFTVAEDN TYDLSGQ GPL Sbjct 121 SVTRLGNLNARKVVVLVNPTTNEYRIDWERSALVNGLVPAQFTVAEDNTTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRR------------------AAERQA 222 MEILQILKANN+PLNRMVDIRSNPALR Q+QAVVRR + A Sbjct 181 MEILQILKANNIPLNRMVDIRSNPALRAQIQAVVRRAAQQQAPAGQPAPAGQPATGQPSA 240 Query 223 PAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 P A P SIA RL EL L ASGA+ EY S+RA II+EI Sbjct 241 PVAAPPGP-SIAARLQELNDLHASGALTEQEYNSRRAAIIAEI 282 >gi|254776923|ref|ZP_05218439.1| hypothetical protein MaviaA2_19961 [Mycobacterium avium subsp. avium ATCC 25291] Length=282 Score = 404 bits (1039), Expect = 5e-111, Method: Compositional matrix adjust. Identities = 203/283 (72%), Positives = 230/283 (82%), Gaps = 19/283 (6%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARY+K QL+VLLCGGLVGPIFLVVYFTLGLGSL+ WMFYVGL+ITVADVL+ALAL NY Sbjct 1 MLARYLKAQLVVLLCGGLVGPIFLVVYFTLGLGSLLQWMFYVGLLITVADVLIALALANY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAK++ K AALE++GVLALAQITG++ETGT +N+Q +VKVHLHI+GPG+ PFD+EDRVIA Sbjct 61 GAKSSEKLAALEQNGVLALAQITGITETGTWVNNQQVVKVHLHIAGPGLVPFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNL ARK+VVLVNP T +Y IDWERSALVNGLVPAQFTVAEDN TYDLSGQ GPL Sbjct 121 SVTRLGNLNARKVVVLVNPTTNEYRIDWERSALVNGLVPAQFTVAEDNTTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRR------------------AAERQA 222 MEI+QILKANN+PLNRMVDIRSNPALR Q+QAVVRR + A Sbjct 181 MEIMQILKANNIPLNRMVDIRSNPALRAQIQAVVRRAAQQQAPAGQPAPAGQPATGQPSA 240 Query 223 PAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 P A P SIA RL EL L ASGA+ EY S+RA II+EI Sbjct 241 PVAAPPGP-SIAARLQELNDLHASGALTEQEYNSRRAAIIAEI 282 >gi|336460619|gb|EGO39511.1| hypothetical protein MAPs_38870 [Mycobacterium avium subsp. paratuberculosis S397] Length=282 Score = 403 bits (1036), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 203/283 (72%), Positives = 229/283 (81%), Gaps = 19/283 (6%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARY+K QL+VLLCGGLVGPIFLVVYFTLGLGSL+ WMFYVGL+ITVADVL+ALAL NY Sbjct 1 MLARYLKAQLVVLLCGGLVGPIFLVVYFTLGLGSLLQWMFYVGLLITVADVLIALALANY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAK++ K AALE++GVLALAQITG++ETGT +N+Q +VKVHLHI+GPG+ PFD+EDRVIA Sbjct 61 GAKSSEKLAALEQNGVLALAQITGITETGTWVNNQQVVKVHLHIAGPGLVPFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNL ARK+VVLVNP T +Y IDWERSALVNGLVPAQFTVAEDN TYDLSGQ GPL Sbjct 121 SVTRLGNLNARKVVVLVNPTTNEYRIDWERSALVNGLVPAQFTVAEDNTTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRR------------------AAERQA 222 MEILQILK NN+PLNRMVDIRSNPALR Q+QAVVRR + A Sbjct 181 MEILQILKGNNIPLNRMVDIRSNPALRAQIQAVVRRAAQQQAPAGQPAPAGQPATGQPSA 240 Query 223 PAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 P A P SIA RL EL L ASGA+ EY S+RA II+EI Sbjct 241 PVAAPPGP-SIAARLQELNDLHASGALTEQEYNSRRAAIIAEI 282 >gi|118464256|ref|YP_883622.1| hypothetical protein MAV_4487 [Mycobacterium avium 104] gi|118165543|gb|ABK66440.1| conserved hypothetical protein [Mycobacterium avium 104] Length=282 Score = 403 bits (1035), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 202/283 (72%), Positives = 230/283 (82%), Gaps = 19/283 (6%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARY+K QL+VLLCGGLVGPIFLVVYFTLGLGSL+ WMFYVGL+ITVADVL+ALAL NY Sbjct 1 MLARYLKAQLVVLLCGGLVGPIFLVVYFTLGLGSLLQWMFYVGLLITVADVLIALALANY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAK++ K AALE++GVLALAQITG++ETGT +N+Q +VKVHLHI+GPG+ PFD+EDRVIA Sbjct 61 GAKSSEKLAALEQNGVLALAQITGITETGTWVNNQQVVKVHLHIAGPGLVPFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNL ARK+VVL+NP T +Y IDWERSALVNGLVPAQFTVAEDN TYDLSGQ GPL Sbjct 121 SVTRLGNLNARKVVVLLNPTTNEYRIDWERSALVNGLVPAQFTVAEDNTTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRR------------------AAERQA 222 MEI+QILKANN+PLNRMVDIRSNPALR Q+QAVVRR + A Sbjct 181 MEIMQILKANNIPLNRMVDIRSNPALRAQIQAVVRRAAQQQAPAGQPAPAGQPATGQPSA 240 Query 223 PAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 P A P SIA RL EL L ASGA+ EY S+RA II+EI Sbjct 241 PVAAPPGP-SIAARLQELNDLHASGALTEQEYNSRRAAIIAEI 282 >gi|342861774|ref|ZP_08718419.1| hypothetical protein MCOL_22910 [Mycobacterium colombiense CECT 3035] gi|342130591|gb|EGT83895.1| hypothetical protein MCOL_22910 [Mycobacterium colombiense CECT 3035] Length=278 Score = 402 bits (1032), Expect = 4e-110, Method: Compositional matrix adjust. Identities = 207/278 (75%), Positives = 239/278 (86%), Gaps = 13/278 (4%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +LARY+K QL+VLLCGGLVGPIFL+VYFTLGL +L+ WMFYVGL+ITVADVL+ALAL NY Sbjct 1 MLARYLKAQLVVLLCGGLVGPIFLIVYFTLGLDNLLQWMFYVGLVITVADVLIALALANY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAK++AK AALE++GVLALAQITG++ETGT +N+Q +VKVHLHI+GPG+ PFD+EDRVIA Sbjct 61 GAKSSAKVAALEQNGVLALAQITGITETGTWVNNQQVVKVHLHIAGPGLLPFDSEDRVIA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRLGNL ARK+VVLVNP T +Y IDWERSALVNGLVPAQFTVAEDNKTYDLSGQ GPL Sbjct 121 SVTRLGNLNARKVVVLVNPTTSEYRIDWERSALVNGLVPAQFTVAEDNKTYDLSGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPAS----------- 229 MEILQILKANNV LN+MVDIRSNPALR Q+QAVVRRA ++QAPAA+PA Sbjct 181 MEILQILKANNVALNQMVDIRSNPALRAQIQAVVRRAVDQQAPAAQPAPAAAPAAAAVVT 240 Query 230 --QGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 + SIA RL EL+ L ASGA+ AEY S+RA II+EI Sbjct 241 PPEPSIAARLQELQDLHASGALTDAEYTSRRAAIIAEI 278 >gi|120402296|ref|YP_952125.1| hypothetical protein Mvan_1285 [Mycobacterium vanbaalenii PYR-1] gi|119955114|gb|ABM12119.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=275 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 165/271 (61%), Positives = 212/271 (79%), Gaps = 10/271 (3%) Query 4 RYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNYGAK 63 RY+K+QL VLLCG +VGPIFLV+YF G +M WMF+ GL++T DVL+AL +TN GA+ Sbjct 6 RYVKIQLFVLLCG-IVGPIFLVIYFATGADPMMRWMFWTGLLVTAIDVLIALVMTNVGAR 64 Query 64 TAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIASVT 123 +AAKT ALE SGVLALAQ+ G+ ET TRIND+PLVK+ L +SGPGITPF T+D+VIASV+ Sbjct 65 SAAKTQALEASGVLALAQVVGIHETNTRINDRPLVKLDLQVSGPGITPFSTQDQVIASVS 124 Query 124 RLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPLMEI 183 RL +T+RKLV LV+P T Y IDWERSALV+G++PA F+VAEDN TYDL+GQT LMEI Sbjct 125 RLPMITSRKLVALVDPVTNDYQIDWERSALVSGMMPATFSVAEDNTTYDLTGQTEALMEI 184 Query 184 LQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQ---------APAAEPASQGSIA 234 LQ+LKAN + ++ M+D+R+NPA RQQVQA+VR AA RQ AP A P + + A Sbjct 185 LQVLKANGIGMDSMIDLRANPAARQQVQAIVRHAAARQPVPPPVPAAAPYAAPPVEPTTA 244 Query 235 ERLAELESLRASGAVNAAEYESKRAQIISEI 265 +RL ELE+LRA+G++ EY +KR QII+++ Sbjct 245 QRLQELETLRATGSITDDEYAAKRQQIIADL 275 >gi|145225649|ref|YP_001136327.1| hypothetical protein Mflv_5073 [Mycobacterium gilvum PYR-GCK] gi|315446001|ref|YP_004078880.1| hypothetical protein Mspyr1_44910 [Mycobacterium sp. Spyr1] gi|145218135|gb|ABP47539.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315264304|gb|ADU01046.1| hypothetical protein Mspyr1_44910 [Mycobacterium sp. Spyr1] Length=275 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 161/275 (59%), Positives = 213/275 (78%), Gaps = 18/275 (6%) Query 4 RYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNYGAK 63 RY+K+Q VLLCG +VGPIFLV+YF G L++WMF+ GL+IT ADVL+ALA+T +GA+ Sbjct 6 RYVKIQAFVLLCG-IVGPIFLVIYFATGADPLLAWMFWTGLLITAADVLIALAITGFGAR 64 Query 64 TAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIASVT 123 +AAK ALE +GVLAL QI G+ ET TRINDQPLVK+ L +SGPGITPF T+D+V+ASV+ Sbjct 65 SAAKKQALEATGVLALGQIVGIHETNTRINDQPLVKIDLQVSGPGITPFSTQDQVVASVS 124 Query 124 RLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPLMEI 183 RL +T R+L +LV+P T Y IDWERSALV+G++PA FT++EDN+TYDL+GQT PLMEI Sbjct 125 RLPMITNRQLAMLVDPITNDYQIDWERSALVSGMMPATFTISEDNQTYDLTGQTEPLMEI 184 Query 184 LQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQ-------------APAAEPASQ 230 LQ+LK++ + ++ M+D+RSNPA RQQVQA+VRRA +Q A A EP + Sbjct 185 LQVLKSHGIGVDHMIDLRSNPAARQQVQAIVRRAVAQQAPPPPVPAGAPYLAAAPEPTT- 243 Query 231 GSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 A+RL ELE+LRA+G++ EY +KRA+II+E+ Sbjct 244 ---AQRLQELETLRATGSITDDEYAAKRAEIIAEL 275 >gi|108797962|ref|YP_638159.1| hypothetical protein Mmcs_0989 [Mycobacterium sp. MCS] gi|119867059|ref|YP_937011.1| hypothetical protein Mkms_1007 [Mycobacterium sp. KMS] gi|126433625|ref|YP_001069316.1| hypothetical protein Mjls_1017 [Mycobacterium sp. JLS] gi|108768381|gb|ABG07103.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119693148|gb|ABL90221.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126233425|gb|ABN96825.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=275 Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 165/268 (62%), Positives = 209/268 (78%), Gaps = 10/268 (3%) Query 4 RYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNYGAK 63 RYI++QL VLLCG +VGPIFL +YF G ++ WMF+ GL++T ADVL+AL +T +GA Sbjct 6 RYIRIQLFVLLCG-IVGPIFLAIYFATGPDPMLEWMFWTGLLVTAADVLIALGITAFGAH 64 Query 64 TAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIASVT 123 +AA+TA LE GVLALAQITG+ ET TRIN+QPLVK+ L I+GPG+TPF +DRV+ASV+ Sbjct 65 SAARTAELEARGVLALAQITGIHETNTRINEQPLVKLDLSITGPGLTPFTAQDRVVASVS 124 Query 124 RLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPLMEI 183 RL +T RKLV +V+P T +Y IDWERSALV GL+PA FTV+EDN TYDL+GQ+GPL+EI Sbjct 125 RLPMITNRKLVAIVDPTTNEYQIDWERSALVGGLMPATFTVSEDNHTYDLTGQSGPLLEI 184 Query 184 LQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAE--------PASQG-SIA 234 LQILKA+ + +N MVD+R+NPA RQQVQAVVR++A +Q PA A G S A Sbjct 185 LQILKAHGIGMNNMVDLRANPAARQQVQAVVRQSAVQQVPAPAAMAPSAPVTAPTGPSTA 244 Query 235 ERLAELESLRASGAVNAAEYESKRAQII 262 +RL ELE+LRA+GA+ AEY +KR QII Sbjct 245 QRLQELETLRATGAITDAEYAAKRQQII 272 >gi|118467727|ref|YP_885791.1| hypothetical protein MSMEG_1406 [Mycobacterium smegmatis str. MC2 155] gi|118169014|gb|ABK69910.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=283 Score = 321 bits (822), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 159/281 (57%), Positives = 210/281 (75%), Gaps = 19/281 (6%) Query 3 ARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNYGA 62 ARY+++Q VLLCG +VGPIFLV+YF G L+ WMF+ GL+IT DVL+ALA+T G Sbjct 4 ARYLRIQAFVLLCG-IVGPIFLVIYFGSGGSPLIKWMFWTGLLITALDVLIALAITAMGT 62 Query 63 KTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIASV 122 ++AAK LE++GV+ALAQ+ G+ ET TRIN++PLVK+ L ISGPGI PF ++DRV+ASV Sbjct 63 RSAAKHQDLEQNGVIALAQVVGIHETNTRINERPLVKLDLQISGPGIAPFASQDRVLASV 122 Query 123 TRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPLME 182 RL +T RKLV +V+P T +Y IDW+RS+LV+GL+PA FT+AEDN TYDL+GQT PL+E Sbjct 123 ARLPMITNRKLVAVVDPTTHEYRIDWDRSSLVSGLMPATFTIAEDNTTYDLTGQTEPLLE 182 Query 183 ILQILKANNVPLNRMVDIRSNPALRQQVQAVVRR-AAERQAPAAEPASQG---------- 231 ILQILKA+N+ +N M+D+R+NP R+QVQ VVRR AA+R AP P G Sbjct 183 ILQILKAHNIGMNNMIDLRANPVAREQVQRVVRRAAAQRNAPQGVPQPAGQPTPQPAAAA 242 Query 232 -------SIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 S A+RL ELE+LRA+GA++ AEY +KR QII+++ Sbjct 243 PYAAPSMSTAQRLQELETLRATGAISEAEYTAKRQQIIADL 283 >gi|333989338|ref|YP_004521952.1| hypothetical protein JDM601_0698 [Mycobacterium sp. JDM601] gi|333485306|gb|AEF34698.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=264 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 166/265 (63%), Positives = 203/265 (77%), Gaps = 1/265 (0%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 +L RY+K Q +VLLCGGLVGPIFL VYF G S +SWMFY GL+++ ADVL ALA+ Y Sbjct 1 MLWRYVKAQAMVLLCGGLVGPIFLAVYFATGRQSDLSWMFYTGLLVSFADVLAALAIAYY 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 GAK+ A++ LE+ GVLALAQ+TG+ ETGTR+NDQPLV + LHI GPG++PFDT DRV+A Sbjct 61 GAKSGARSQFLEQHGVLALAQVTGMGETGTRVNDQPLVTLDLHIEGPGLSPFDTRDRVLA 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SVTRL +T R L VLV+PAT + IDW+RSAL+ G VPA+FTVAEDN+TYDL+GQ GPL Sbjct 121 SVTRLPMITGRNLAVLVDPATNGFQIDWQRSALLAGAVPARFTVAEDNQTYDLTGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAEL 240 MEILQ+L+AN V M DIRSNP LRQQV AV RRAA + A + S AERL EL Sbjct 181 MEILQLLRANGVEARGMTDIRSNPVLRQQVSAVARRAAAPPSAAPGQQPR-SAAERLQEL 239 Query 241 ESLRASGAVNAAEYESKRAQIISEI 265 ++LR +GAV EY KR QII+++ Sbjct 240 DALRRAGAVTDDEYTRKRQQIIADL 264 >gi|169630924|ref|YP_001704573.1| hypothetical protein MAB_3845c [Mycobacterium abscessus ATCC 19977] gi|169242891|emb|CAM63919.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=266 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 121/267 (46%), Positives = 179/267 (68%), Gaps = 5/267 (1%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 V+AR++K+ LLCG +VGPIF+V+Y+ + + SWM Y G+ IT+ V++A LT Sbjct 3 VVARFLKILAFSLLCG-IVGPIFIVMYYVIDEPA-TSWMLYSGIGITIGIVVLAFVLTLL 60 Query 61 GAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIA 120 K LE +G+LALA + +ETG +NDQP++K+ L + G GI+PF E R Sbjct 61 FTKNEEARKLLEANGILALADVMAANETGMTVNDQPVIKLTLQVHGDGISPFRAETRARV 120 Query 121 SVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPL 180 SV ++ L+ KLVVLV P T+Q+ IDW+RSAL+NG VPA+FT + + YDL+GQ GPL Sbjct 121 SVLQVPTLSRGKLVVLVAPGTEQFQIDWQRSALLNGQVPAKFTSSSQGREYDLTGQAGPL 180 Query 181 MEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRR--AAERQAPAAEPASQGSIAERLA 238 EI+++LKAN + + ++DIRSNP RQQ+ A++R+ A ER AE + GS+A+RLA Sbjct 181 FEIMKVLKANGIGSDGVIDIRSNPVARQQIDAILRKTEAGERSM-GAETGNGGSVADRLA 239 Query 239 ELESLRASGAVNAAEYESKRAQIISEI 265 EL+ L+ + ++ AEY KR +I+ ++ Sbjct 240 ELDRLKLASLISEAEYGDKRTEILRDL 266 >gi|262203665|ref|YP_003274873.1| hypothetical protein Gbro_3801 [Gordonia bronchialis DSM 43247] gi|262087012|gb|ACY22980.1| hypothetical protein Gbro_3801 [Gordonia bronchialis DSM 43247] Length=247 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/247 (39%), Positives = 141/247 (58%), Gaps = 20/247 (8%) Query 39 MFYVGLIITVADVLVALALTNYGAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLV 98 M + GL +T+ DV + +A+ A +++ L+ +G +A+A I + +T +INDQPL+ Sbjct 1 MLWTGLGVTLLDVTIGVAVAWAAAGRQGRSSRLKATGRVAIADIISIEQTSVQINDQPLM 60 Query 99 KVHLHISGPGITPFDTEDRVIASVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLV 158 K+ LHI G + FD E RV+ V + G L AR+L VLV+P + + IDW+ +AL+ G V Sbjct 61 KLGLHIHGDDMVAFDVEKRVVVPVFQQGLLHARRLSVLVDPVSNDFEIDWQATALLAGSV 120 Query 159 PAQFTVAEDNKTYDLSGQTGPLMEILQILKANNVPLNRMVDIRSNPALRQQVQAVVR--- 215 PA+FT D KTYD++GQ PL EI+ IL VP +D+RSNPA R++V VVR Sbjct 121 PARFTSVADGKTYDITGQPEPLAEIIAILHRYGVPAGGTIDLRSNPAAREEVLDVVRGFT 180 Query 216 -----------------RAAERQAPAAEPASQGSIAERLAELESLRASGAVNAAEYESKR 258 A A A + +AERLA+++ LR GA++ +EY + R Sbjct 181 ATTASATTTSATTTAPAGAGADSAVAGPDVASRPVAERLADVDDLRRRGAISESEYTAAR 240 Query 259 AQIISEI 265 +I+ I Sbjct 241 QRILGSI 247 >gi|312198821|ref|YP_004018882.1| hypothetical protein FraEuI1c_5023 [Frankia sp. EuI1c] gi|311230157|gb|ADP83012.1| hypothetical protein FraEuI1c_5023 [Frankia sp. EuI1c] Length=197 Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 85/158 (54%), Positives = 114/158 (73%), Gaps = 2/158 (1%) Query 63 KTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIASV 122 + A A R GVLALA+IT L++TGT +NDQP V++ L ++GPG+ F T RV Sbjct 42 RDATAGTAARRKGVLALARITELAQTGTVLNDQPEVRLSLQVTGPGLA-FGTAARVAVGG 100 Query 123 TRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPLME 182 R N+ A +LVVLV+PA+++Y IDW+RSALVNGLVPA+F + DL+GQTGP+ME Sbjct 101 ARRANVDAGQLVVLVDPASREYQIDWDRSALVNGLVPARFALT-GGGVRDLTGQTGPIME 159 Query 183 ILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAER 220 ILQIL A+NV L+RM + ++PA+ +QVQAV+R AA R Sbjct 160 ILQILWAHNVSLSRMSEPGTDPAVGEQVQAVLRAAATR 197 >gi|118616481|ref|YP_904813.1| hypothetical protein MUL_0679 [Mycobacterium ulcerans Agy99] gi|183980948|ref|YP_001849239.1| hypothetical protein MMAR_0927 [Mycobacterium marinum M] gi|118568591|gb|ABL03342.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] gi|183174274|gb|ACC39384.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=65 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 32/60 (54%), Positives = 41/60 (69%), Gaps = 1/60 (1%) Query 2 LARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNYG 61 L RYI +QL+V + G +VGPIFL+V+F W F+VGL IT ADV++ALALT G Sbjct 4 LRRYIVIQLMVFVIG-IVGPIFLIVFFASPSDPNAKWGFWVGLFITYADVMIALALTAAG 62 >gi|118473961|ref|YP_887808.1| hypothetical protein MSMEG_3504 [Mycobacterium smegmatis str. MC2 155] gi|118175248|gb|ABK76144.1| probable membrane protein [Mycobacterium smegmatis str. MC2 155] Length=83 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 45/70 (65%), Gaps = 1/70 (1%) Query 1 VLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNY 60 V RY+++QL+V + G +VGPIFL+VYF + WM+Y GL++T ++L+AL +T Sbjct 3 VFWRYVRIQLMVFVVG-IVGPIFLLVYFAAQPDPTIKWMYYTGLLLTAGEILIALNVTEA 61 Query 61 GAKTAAKTAA 70 ++ T A Sbjct 62 ISRHHPSTDA 71 >gi|240169263|ref|ZP_04747922.1| hypothetical protein MkanA1_08114 [Mycobacterium kansasii ATCC 12478] Length=79 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 29/66 (44%), Positives = 43/66 (66%), Gaps = 1/66 (1%) Query 2 LARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNYG 61 L RY+ +QL++ + G +VGPIFLV++F M W +++GL +T ADV++ALALT G Sbjct 4 LRRYVVIQLMMFVFG-IVGPIFLVMFFLSQPDPTMRWAYWIGLFVTYADVMIALALTAAG 62 Query 62 AKTAAK 67 K Sbjct 63 EDKPGK 68 >gi|120403976|ref|YP_953805.1| hypothetical protein Mvan_2994 [Mycobacterium vanbaalenii PYR-1] gi|119956794|gb|ABM13799.1| hypothetical protein Mvan_2994 [Mycobacterium vanbaalenii PYR-1] Length=82 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/74 (46%), Positives = 45/74 (61%), Gaps = 5/74 (6%) Query 5 YIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTN----Y 60 Y ++Q + LL G LVGPIFL VYF + WM++ GL+IT AD+L+ALA+T+ Sbjct 7 YARIQGMALLFG-LVGPIFLFVYFAAQPDPTLRWMYWWGLLITAADILIALAVTDSVVSR 65 Query 61 GAKTAAKTAALERS 74 A K A L RS Sbjct 66 DRDIADKAARLPRS 79 >gi|145223862|ref|YP_001134540.1| hypothetical protein Mflv_3275 [Mycobacterium gilvum PYR-GCK] gi|315444191|ref|YP_004077070.1| hypothetical protein Mspyr1_26030 [Mycobacterium sp. Spyr1] gi|145216348|gb|ABP45752.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315262494|gb|ADT99235.1| hypothetical protein Mspyr1_26030 [Mycobacterium sp. Spyr1] Length=82 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/58 (44%), Positives = 40/58 (69%), Gaps = 1/58 (1%) Query 2 LARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTN 59 L Y+++Q ++ + G +VGPIFL VYF + + WM++ GL IT AD+L+AL +T+ Sbjct 4 LWVYLRIQAMMFVFG-IVGPIFLFVYFAVQPDITVRWMYWWGLFITAADILIALVITD 60 >gi|254412146|ref|ZP_05025921.1| hypothetical protein MC7420_5535 [Microcoleus chthonoplastes PCC 7420] gi|196181112|gb|EDX76101.1| hypothetical protein MC7420_5535 [Microcoleus chthonoplastes PCC 7420] Length=131 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 19/49 (39%), Positives = 30/49 (62%), Gaps = 0/49 (0%) Query 217 AAERQAPAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 +A Q P +PA G+IA+ L +L+ LR G ++ E+E KR Q++ I Sbjct 82 SAPSQIPEVDPAQVGAIADALRQLDKLRQEGLMSEYEFEQKRRQLLDRI 130 >gi|158336902|ref|YP_001518077.1| hypothetical protein AM1_3773 [Acaryochloris marina MBIC11017] gi|158307143|gb|ABW28760.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length=137 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 19/40 (48%), Positives = 25/40 (63%), Gaps = 0/40 (0%) Query 223 PAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQII 262 P EPA +IAE L +LESLR G V E+E +R Q++ Sbjct 97 PTLEPAQMNAIAESLRQLESLRQEGLVTDYEFEQQRRQLL 136 >gi|111220975|ref|YP_711769.1| hypothetical protein FRAAL1522 [Frankia alni ACN14a] gi|111148507|emb|CAJ60178.1| hypothetical protein FRAAL1522 [Frankia alni ACN14a] Length=131 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 33/111 (30%), Positives = 50/111 (46%), Gaps = 27/111 (24%) Query 61 GAKTAAKTAALERSGVLAL--------AQITGLSETGTRINDQPLVKVHLHISGPGITPF 112 G + AA+ A LER+ L L A + L +TG R+N + + +VHL + PG P+ Sbjct 21 GPRHAAQRALLERNRALTLIHSGQATTATVDTLCDTGVRVNGRAVAEVHLLVDRPGGAPY 80 Query 113 -------------DTEDRVIASVTRLGNLTARKLVVLVNP-ATQQYLIDWE 149 D IAS R R++ VLV+P + L+ W+ Sbjct 81 PVVRSAVVPDADMDLSRAAIASSGR-----PRRIPVLVDPRRPENVLLRWD 126 >gi|332708555|ref|ZP_08428529.1| putative membrane protein [Lyngbya majuscula 3L] gi|332352652|gb|EGJ32218.1| putative membrane protein [Lyngbya majuscula 3L] Length=131 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 19/49 (39%), Positives = 30/49 (62%), Gaps = 0/49 (0%) Query 217 AAERQAPAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 ++E + +PA G IA+ L +L+SLR G V+ E+E KR Q++ I Sbjct 82 SSENPSAGIDPAKVGEIADALRQLDSLRQEGLVSEYEFEQKRRQLLDLI 130 >gi|54027505|ref|YP_121747.1| hypothetical protein nfa55310 [Nocardia farcinica IFM 10152] gi|54019013|dbj|BAD60383.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=274 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/64 (32%), Positives = 33/64 (52%), Gaps = 1/64 (1%) Query 62 AKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIAS 121 A T T A R+G+ L + + +TG ++NDQP V++ + G FD R++ Sbjct 76 ALTGRNTGAF-RAGLTGLGTVKSVRQTGVQVNDQPQVRIEFGVEGADGKVFDATARLVVP 134 Query 122 VTRL 125 +T L Sbjct 135 LTEL 138 >gi|335035656|ref|ZP_08528991.1| hypothetical protein AGRO_2990 [Agrobacterium sp. ATCC 31749] gi|333792987|gb|EGL64349.1| hypothetical protein AGRO_2990 [Agrobacterium sp. ATCC 31749] Length=181 Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust. Identities = 18/46 (40%), Positives = 28/46 (61%), Gaps = 0/46 (0%) Query 219 ERQAPAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISE 264 +R AP P+ ER+ +L +LR+SGA+ A E+E+ +A II Sbjct 118 QRPAPHFPPSGSDQQIERIEKLAALRSSGAITAEEFETMKAGIIGH 163 >gi|257058510|ref|YP_003136398.1| hypothetical protein Cyan8802_0616 [Cyanothece sp. PCC 8802] gi|256588676|gb|ACU99562.1| putative membrane protein [Cyanothece sp. PCC 8802] Length=135 Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust. Identities = 19/41 (47%), Positives = 25/41 (61%), Gaps = 0/41 (0%) Query 225 AEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 A+ G+IAE L ELE LR G V+ E+E KR Q++ I Sbjct 94 AQSVCVGAIAEGLRELEQLRQDGLVSEYEFEQKRRQLLDRI 134 >gi|149923650|ref|ZP_01912046.1| hypothetical protein PPSIR1_16915 [Plesiocystis pacifica SIR-1] gi|149815465|gb|EDM75002.1| hypothetical protein PPSIR1_16915 [Plesiocystis pacifica SIR-1] Length=399 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/67 (33%), Positives = 40/67 (60%), Gaps = 6/67 (8%) Query 44 LIITVADVLVALALTNYGA--KTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVH 101 +++TVA +VA +G+ + AK AL SGV + ++ + +TG R+N QP++++ Sbjct 293 IVLTVAGTMVA----TFGSMFRGNAKKKALLTSGVQGVGKLLTVEQTGVRVNKQPMLRLR 348 Query 102 LHISGPG 108 + I PG Sbjct 349 MLIEVPG 355 >gi|218245474|ref|YP_002370845.1| hypothetical protein PCC8801_0601 [Cyanothece sp. PCC 8801] gi|218165952|gb|ACK64689.1| conserved hypothetical protein [Cyanothece sp. PCC 8801] Length=135 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/41 (47%), Positives = 25/41 (61%), Gaps = 0/41 (0%) Query 225 AEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 A+ G+IAE L ELE LR G V+ E+E KR Q++ I Sbjct 94 AQSVCVGAIAEGLRELEQLRQDGLVSEYEFEQKRRQLLDRI 134 >gi|86739624|ref|YP_480024.1| hypothetical protein Francci3_0911 [Frankia sp. CcI3] gi|86566486|gb|ABD10295.1| hypothetical protein Francci3_0911 [Frankia sp. CcI3] Length=170 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/112 (28%), Positives = 50/112 (45%), Gaps = 19/112 (16%) Query 57 LTNYGAKTAAKTAALERSGVLAL--------AQITGLSETGTRINDQPLVKVHLHISGPG 108 L G + AA+ A LER+ L L A + + +TG R+N +P+ +VHL I PG Sbjct 54 LVGPGPRHAAQRALLERNRALKLIDTGRATTAAVCAVRDTGLRVNGRPVAEVHLLIERPG 113 Query 109 I----------TPFDTEDRVIASVTRLGNLTARKLVVLVNPA-TQQYLIDWE 149 T D ++ + R++ VLV+P + L+ W+ Sbjct 114 AWGNVYPVVRSTVLPDPDVDLSEAATASSGRPRRIPVLVDPHRPENVLLGWD 165 >gi|310642496|ref|YP_003947254.1| hypothetical protein [Paenibacillus polymyxa SC2] gi|309247446|gb|ADO57013.1| Hypothetical membrane protein [Paenibacillus polymyxa SC2] gi|343097601|emb|CCC85810.1| hypothetical protein PPM_2873 [Paenibacillus polymyxa M1] Length=266 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/65 (31%), Positives = 34/65 (53%), Gaps = 0/65 (0%) Query 73 RSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIASVTRLGNLTARK 132 + GV + IT + +TGT +N+QP VK+ L ++ G +DT I +T + Sbjct 66 KKGVPGVGIITSVQQTGTYVNNQPQVKLGLTVTKQGEDKYDTALTTIIPLTSMAQFQPGS 125 Query 133 LVVLV 137 +V L+ Sbjct 126 IVPLI 130 >gi|111020258|ref|YP_703230.1| hypothetical protein RHA1_ro03269 [Rhodococcus jostii RHA1] gi|110819788|gb|ABG95072.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=267 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/64 (29%), Positives = 33/64 (52%), Gaps = 0/64 (0%) Query 62 AKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIAS 121 A + +A R G + + + + +TG +NDQP V++ L + G F++ R+I Sbjct 68 AAFTGRNSAAFRQGAVGIGTVRSVRQTGMTLNDQPEVRIDLGVEGADGETFESHARMIVP 127 Query 122 VTRL 125 +T L Sbjct 128 LTEL 131 >gi|256394390|ref|YP_003115954.1| hypothetical protein Caci_5254 [Catenulispora acidiphila DSM 44928] gi|256360616|gb|ACU74113.1| hypothetical protein Caci_5254 [Catenulispora acidiphila DSM 44928] Length=394 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/140 (30%), Positives = 64/140 (46%), Gaps = 20/140 (14%) Query 99 KVHLHISGPGITPFDTEDRVIASVTRLGNLTAR--KLVVLVNPATQQYLID-----WERS 151 +V L+ SGP IT + +DR + S +G L+ R +L V V+ A ++ + W + Sbjct 233 QVRLYSSGPDITMYRWDDRALVSFYPVGKLSGRAEQLEVTVDSALGSFVNNRFQAVWHAA 292 Query 152 ALVNGLVPAQFTVAEDN--KTY-----DLSGQ----TGPLMEILQILKANNVPLNRMVDI 200 A L P TVA+ N +TY DL G+ + + ++ +N D Sbjct 293 APHQALTP--ITVADGNIERTYLVRFVDLDGRRFVASRRVERFMRRAVGEISAVNGGRDY 350 Query 201 RSNPALRQQVQAVVRRAAER 220 R PA R QV A++ A R Sbjct 351 RLEPADRSQVGALLDAAFRR 370 >gi|315302560|ref|ZP_07873388.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596] gi|313629072|gb|EFR97377.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596] Length=267 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/95 (28%), Positives = 46/95 (49%), Gaps = 8/95 (8%) Query 34 SLMSWMFYVGLIITVADVLVALALTNYGAKTAAKTAALERSGVLALAQITGLSETGTRIN 93 S + Y G+ I V ++ L L+ +G + ++GV AL I + +TGT IN Sbjct 36 SAFRYTLYGGIAILVISSILPLVLSGFGGRV--------KNGVPALGIIESVRQTGTYIN 87 Query 94 DQPLVKVHLHISGPGITPFDTEDRVIASVTRLGNL 128 +Q V++ + ++ FDT I +T+L + Sbjct 88 EQXXVELKVQVTEESGEQFDTTITTIIPLTQLASF 122 >gi|269958061|ref|YP_003327850.1| hypothetical protein Xcel_3292 [Xylanimonas cellulosilytica DSM 15894] gi|269306742|gb|ACZ32292.1| hypothetical protein Xcel_3292 [Xylanimonas cellulosilytica DSM 15894] Length=118 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 15/40 (38%), Positives = 28/40 (70%), Gaps = 0/40 (0%) Query 226 EPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 +PA + S+ ERLAEL++L +G + AE ++ RA+++ + Sbjct 79 QPAPRQSLTERLAELDALHRAGTITTAERDAARAKLLGTL 118 >gi|17230469|ref|NP_487017.1| hypothetical protein all2977 [Nostoc sp. PCC 7120] gi|17132071|dbj|BAB74676.1| all2977 [Nostoc sp. PCC 7120] Length=124 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 16/35 (46%), Positives = 25/35 (72%), Gaps = 0/35 (0%) Query 231 GSIAERLAELESLRASGAVNAAEYESKRAQIISEI 265 G+IA+ L EL+SLR G ++ E+E KR Q++ +I Sbjct 89 GAIADALRELDSLRQDGLISEYEFEQKRRQLLDQI 123 >gi|255261575|ref|ZP_05340917.1| Trk system potassium uptake protein [Thalassiobium sp. R2A62] gi|255103910|gb|EET46584.1| Trk system potassium uptake protein [Thalassiobium sp. R2A62] Length=505 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/109 (32%), Positives = 57/109 (53%), Gaps = 22/109 (20%) Query 33 GSLMSWMFYVGLIITVADVLVALALTNYGAKTAAKTAALERSGVLALAQITGLSETGTRI 92 G+ ++W+F++ I++A V++ALALT +TA VL++A LS TG Sbjct 412 GAYIAWIFFMLFAISIAGVMLALALTGVQFETAM---------VLSIAT---LSTTG--- 456 Query 93 NDQPLVKV--HLHISGPGITPFDTEDRVIASVTRLGNLTARKLVVLVNP 139 PL ++ + I+ G+ DT ++A LG L A ++ L+NP Sbjct 457 ---PLAEIAAEVPIAYAGLP--DTARTILAFAMVLGRLEALAIIALLNP 500 >gi|22298034|ref|NP_681281.1| transcriptional regulator [Thermosynechococcus elongatus BP-1] gi|22294212|dbj|BAC08043.1| transcriptional regulator [Thermosynechococcus elongatus BP-1] Length=219 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 46/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%) Query 113 DTEDRVIASVTRLGNLTARKLV--VLVNP-ATQQYLIDWERSALVNGLVPAQFTVAEDNK 169 DT+ ++ + R G+L+A++L + ++P A +++L D E LV V + TV Sbjct 6 DTKQDILHCLLRDGHLSAQELAAQLAISPQAVRRHLKDLEAEQLVTYKVLSG-TVGRPQY 64 Query 170 TYDLSGQTGPLMEILQILKANNVPLNRMVDIRSNPALR---QQVQAVVRRAAERQAPA-A 225 Y +S + LQ+ + P +++ + A +Q+Q V++ A +R+A A Sbjct 65 RYTISEAGREELRQLQLRQQATHPKGFALELLESVAATLGPEQMQDVLQAAWQRKALAYR 124 Query 226 EPASQGSIAERLAELESLRASGAVNAAEY---ESKRAQIISE 264 E G++AERLA L +LR A Y E K A +++E Sbjct 125 EQMGSGTLAERLARLVALRQQEGYMAEFYPVSEPKGAYLLTE 166 >gi|291298429|ref|YP_003509707.1| hypothetical protein Snas_0903 [Stackebrandtia nassauensis DSM 44728] gi|290567649|gb|ADD40614.1| hypothetical protein Snas_0903 [Stackebrandtia nassauensis DSM 44728] Length=218 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 24/36 (67%), Gaps = 5/36 (13%) Query 78 ALAQITGLSETGTRINDQPLVKVHLHISGPGITPFD 113 ALA+ITG+ TGT IND PL ++ L ++ PFD Sbjct 73 ALARITGIKRTGTSINDAPLCELDLVVA-----PFD 103 >gi|158317385|ref|YP_001509893.1| hypothetical protein Franean1_5636 [Frankia sp. EAN1pec] gi|158112790|gb|ABW14987.1| hypothetical protein Franean1_5636 [Frankia sp. EAN1pec] Length=141 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/89 (27%), Positives = 42/89 (48%), Gaps = 13/89 (14%) Query 74 SGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIASVTRLG------- 126 +G +A I +S+TG R++ + + +VHL + PG P+ R + V G Sbjct 48 NGRATMAVIDTVSDTGVRVDGRTVAEVHLLVERPGQEPYPVTRRAVVPVDEAGASPVGDA 107 Query 127 -----NLTARKLVVLVNPA-TQQYLIDWE 149 + R++ VLV+PA L+ W+ Sbjct 108 RGGIPSQLRRRVPVLVDPARPDNVLLRWD 136 >gi|37520983|ref|NP_924360.1| hypothetical protein gll1414 [Gloeobacter violaceus PCC 7421] gi|35211979|dbj|BAC89355.1| gll1414 [Gloeobacter violaceus PCC 7421] Length=280 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 27/77 (36%), Positives = 38/77 (50%), Gaps = 13/77 (16%) Query 184 LQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAELESL 243 LQ+ + + P V+I + RAA+ + AA+ + + AE+ AE ESL Sbjct 183 LQLWRPDGTPFESYVEIAA-------------RAAQEKQRAAQESLRAQSAEQRAEQESL 229 Query 244 RASGAVNAAEYESKRAQ 260 RA A AE ES RAQ Sbjct 230 RAQSAEQRAEQESLRAQ 246 >gi|325473276|gb|EGC76471.1| ABC transporter [Treponema denticola F0402] Length=573 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/43 (45%), Positives = 25/43 (59%), Gaps = 2/43 (4%) Query 21 PIFLVVYFTLGL--GSLMSWMFYVGLIITVADVLVALALTNYG 61 P+FL+++F G GSL S FY GLI +A V+ L NY Sbjct 36 PMFLIMFFLQGYFEGSLKSAYFYTGLIAAIAVVMYILLHVNYN 78 >gi|330825625|ref|YP_004388928.1| hypothetical protein Alide2_3066 [Alicycliphilus denitrificans K601] gi|329310997|gb|AEB85412.1| hypothetical protein Alide2_3066 [Alicycliphilus denitrificans K601] Length=179 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 36/121 (30%), Positives = 58/121 (48%), Gaps = 14/121 (11%) Query 150 RSAL-VNGLVPAQFTVAEDNKTYDLSGQTGPLMEILQI----LKANNVPLNRMVDIRSNP 204 RSAL V+ ++ F V + D+ Q G L ++ I + +NVP +SN Sbjct 68 RSALHVHNIMETPFHVLLSD-VKDVQFQEGRLESLMTINGTYVFRSNVPK------KSNA 120 Query 205 ALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISE 264 AL ++ + +R AP A PA + E L EL+ L G + +EY KR ++++ Sbjct 121 ALFAEMLTAIVDTVKRHAPNASPAQRAK--ESLRELKELFDEGLLTESEYTQKRQVLVAQ 178 Query 265 I 265 I Sbjct 179 I 179 >gi|170078841|ref|YP_001735479.1| hypothetical protein SYNPCC7002_A2245 [Synechococcus sp. PCC 7002] gi|169886510|gb|ACB00224.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length=130 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/48 (42%), Positives = 28/48 (59%), Gaps = 5/48 (10%) Query 221 QAPAAEPA-----SQGSIAERLAELESLRASGAVNAAEYESKRAQIIS 263 +APA++ A +IAE L ELE LR G + E+E KR Q++S Sbjct 83 KAPASDQAIAAVQQTAAIAEALRELEKLRVEGLITEYEFEQKRRQLLS 130 Lambda K H 0.319 0.134 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 401076841216 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40