BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0691A

Length=62
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15840096|ref|NP_335133.1|  hypothetical protein MT0719.1 [Myco...   128    2e-28
gi|308370477|ref|ZP_07666942.1|  hypothetical protein TMCG_03503 ...  97.4    7e-19
gi|254822796|ref|ZP_05227797.1|  hypothetical protein MintA_22894...  54.7    5e-06
gi|254776916|ref|ZP_05218432.1|  hypothetical protein MaviaA2_199...  51.6    4e-05
gi|108797972|ref|YP_638169.1|  hypothetical protein Mmcs_0999 [My...  50.4    8e-05
gi|118466062|ref|YP_883615.1|  hypothetical protein MAV_4480 [Myc...  50.4    9e-05
gi|118473061|ref|YP_885804.1|  hypothetical protein MSMEG_1421 [M...  47.8    6e-04
gi|333991990|ref|YP_004524604.1|  hypothetical protein JDM601_335...  45.4    0.003
gi|262203644|ref|YP_003274852.1|  hypothetical protein Gbro_3780 ...  44.7    0.004
gi|315445990|ref|YP_004078869.1|  hypothetical protein Mspyr1_448...  41.6    0.042
gi|326384862|ref|ZP_08206537.1|  hypothetical protein SCNU_18052 ...  41.2    0.054
gi|288919786|ref|ZP_06414111.1|  hypothetical protein FrEUN1fDRAF...  39.7    0.16 
gi|312140961|ref|YP_004008297.1|  hypothetical protein REQ_36290 ...  38.9    0.23 
gi|331699424|ref|YP_004335663.1|  hypothetical protein Psed_5683 ...  38.9    0.23 
gi|226305286|ref|YP_002765244.1|  hypothetical protein RER_17970 ...  38.9    0.25 
gi|54025411|ref|YP_119653.1|  hypothetical protein nfa34410 [Noca...  38.5    0.37 
gi|284993285|ref|YP_003411840.1|  hypothetical protein Gobs_4938 ...  37.7    0.52 
gi|111222982|ref|YP_713776.1|  hypothetical protein FRAAL3570 [Fr...  37.7    0.66 
gi|326329211|ref|ZP_08195538.1|  hypothetical protein NBCG_00646 ...  37.0    0.88 
gi|269126597|ref|YP_003299967.1|  hypothetical protein Tcur_2364 ...  35.8    2.4  
gi|134098951|ref|YP_001104612.1|  hypothetical protein SACE_2387 ...  35.0    4.1  


>gi|15840096|ref|NP_335133.1| hypothetical protein MT0719.1 [Mycobacterium tuberculosis CDC1551]
 gi|167967930|ref|ZP_02550207.1| hypothetical protein MtubH3_07793 [Mycobacterium tuberculosis 
H37Ra]
 gi|254231011|ref|ZP_04924338.1| hypothetical protein TBCG_00682 [Mycobacterium tuberculosis C]
 12 more sequence titles
 
gi|254363638|ref|ZP_04979684.1| hypothetical protein TBHG_00686 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289568633|ref|ZP_06448860.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289744414|ref|ZP_06503792.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|308371737|ref|ZP_07667238.1| hypothetical protein TMDG_02416 [Mycobacterium tuberculosis SUMu004]
 gi|308396511|ref|ZP_07669362.1| hypothetical protein TMLG_03183 [Mycobacterium tuberculosis SUMu012]
 gi|13880245|gb|AAK44947.1| hypothetical protein MT0719.1 [Mycobacterium tuberculosis CDC1551]
 gi|124600070|gb|EAY59080.1| hypothetical protein TBCG_00682 [Mycobacterium tuberculosis C]
 gi|134149152|gb|EBA41197.1| hypothetical protein TBHG_00686 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289542387|gb|EFD46035.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289684942|gb|EFD52430.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|308335624|gb|EFP24475.1| hypothetical protein TMDG_02416 [Mycobacterium tuberculosis SUMu004]
 gi|308367068|gb|EFP55919.1| hypothetical protein TMLG_03183 [Mycobacterium tuberculosis SUMu012]
Length=62

 Score =  128 bits (322),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 62/62 (100%), Positives = 62/62 (100%), Gaps = 0/62 (0%)

Query  1   MRHHIRPSISALDAILCPDRRIAVETCWRKAIQMDYETDTDTELVTETLVEEVSIDGMCG  60
           MRHHIRPSISALDAILCPDRRIAVETCWRKAIQMDYETDTDTELVTETLVEEVSIDGMCG
Sbjct  1   MRHHIRPSISALDAILCPDRRIAVETCWRKAIQMDYETDTDTELVTETLVEEVSIDGMCG  60

Query  61  VY  62
           VY
Sbjct  61  VY  62


>gi|308370477|ref|ZP_07666942.1| hypothetical protein TMCG_03503 [Mycobacterium tuberculosis SUMu003]
 gi|308373548|ref|ZP_07667604.1| hypothetical protein TMEG_02064 [Mycobacterium tuberculosis SUMu005]
 gi|308374074|ref|ZP_07667704.1| hypothetical protein TMFG_03362 [Mycobacterium tuberculosis SUMu006]
 gi|308331838|gb|EFP20689.1| hypothetical protein TMCG_03503 [Mycobacterium tuberculosis SUMu003]
 gi|308337241|gb|EFP26092.1| hypothetical protein TMEG_02064 [Mycobacterium tuberculosis SUMu005]
 gi|308343105|gb|EFP31956.1| hypothetical protein TMFG_03362 [Mycobacterium tuberculosis SUMu006]
Length=47

 Score = 97.4 bits (241),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 46/47 (98%), Positives = 47/47 (100%), Gaps = 0/47 (0%)

Query  16  LCPDRRIAVETCWRKAIQMDYETDTDTELVTETLVEEVSIDGMCGVY  62
           +CPDRRIAVETCWRKAIQMDYETDTDTELVTETLVEEVSIDGMCGVY
Sbjct  1   MCPDRRIAVETCWRKAIQMDYETDTDTELVTETLVEEVSIDGMCGVY  47


>gi|254822796|ref|ZP_05227797.1| hypothetical protein MintA_22894 [Mycobacterium intracellulare 
ATCC 13950]
 gi|342861781|ref|ZP_08718426.1| hypothetical protein MCOL_22945 [Mycobacterium colombiense CECT 
3035]
 gi|342130598|gb|EGT83902.1| hypothetical protein MCOL_22945 [Mycobacterium colombiense CECT 
3035]
Length=29

 Score = 54.7 bits (130),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 26/29 (90%), Positives = 29/29 (100%), Gaps = 0/29 (0%)

Query  34  MDYETDTDTELVTETLVEEVSIDGMCGVY  62
           MD+ET+TDT+LVTETLVEEVSIDGMCGVY
Sbjct  1   MDHETETDTQLVTETLVEEVSIDGMCGVY  29


>gi|254776916|ref|ZP_05218432.1| hypothetical protein MaviaA2_19926 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|336460677|gb|EGO39568.1| mycofactocin precursor [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=29

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 24/29 (83%), Positives = 28/29 (97%), Gaps = 0/29 (0%)

Query  34  MDYETDTDTELVTETLVEEVSIDGMCGVY  62
           M++ET+TD +LVTETLVEEVSIDGMCGVY
Sbjct  1   MEHETETDAQLVTETLVEEVSIDGMCGVY  29


>gi|108797972|ref|YP_638169.1| hypothetical protein Mmcs_0999 [Mycobacterium sp. MCS]
 gi|108768391|gb|ABG07113.1| hypothetical protein Mmcs_0999 [Mycobacterium sp. MCS]
Length=52

 Score = 50.4 bits (119),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 26/36 (73%), Positives = 29/36 (81%), Gaps = 2/36 (5%)

Query  29  RKAIQM--DYETDTDTELVTETLVEEVSIDGMCGVY  62
           RKA+ M  +   + DTELVTETLVEEVSIDGMCGVY
Sbjct  17  RKAVLMEPNQHVEADTELVTETLVEEVSIDGMCGVY  52


>gi|118466062|ref|YP_883615.1| hypothetical protein MAV_4480 [Mycobacterium avium 104]
 gi|118167349|gb|ABK68246.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=52

 Score = 50.4 bits (119),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 23/29 (80%), Positives = 28/29 (97%), Gaps = 0/29 (0%)

Query  34  MDYETDTDTELVTETLVEEVSIDGMCGVY  62
           +++ET+TD +LVTETLVEEVSIDGMCGVY
Sbjct  24  VEHETETDAQLVTETLVEEVSIDGMCGVY  52


>gi|118473061|ref|YP_885804.1| hypothetical protein MSMEG_1421 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118174348|gb|ABK75244.1| hypothetical protein MSMEG_1421 [Mycobacterium smegmatis str. 
MC2 155]
Length=52

 Score = 47.8 bits (112),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 24/36 (67%), Positives = 28/36 (78%), Gaps = 2/36 (5%)

Query  29  RKAIQM--DYETDTDTELVTETLVEEVSIDGMCGVY  62
           RK + M  +   + +TELVTETLVEEVSIDGMCGVY
Sbjct  17  RKGVHMEPNQHVEAETELVTETLVEEVSIDGMCGVY  52


>gi|333991990|ref|YP_004524604.1| hypothetical protein JDM601_3350 [Mycobacterium sp. JDM601]
 gi|333487958|gb|AEF37350.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=51

 Score = 45.4 bits (106),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 22/30 (74%), Positives = 23/30 (77%), Gaps = 0/30 (0%)

Query  33  QMDYETDTDTELVTETLVEEVSIDGMCGVY  62
           Q   E  TDT+LV E LVEEVSIDGMCGVY
Sbjct  22  QQQTEASTDTDLVVENLVEEVSIDGMCGVY  51


>gi|262203644|ref|YP_003274852.1| hypothetical protein Gbro_3780 [Gordonia bronchialis DSM 43247]
 gi|262086991|gb|ACY22959.1| hypothetical protein Gbro_3780 [Gordonia bronchialis DSM 43247]
Length=43

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 20/24 (84%), Positives = 22/24 (92%), Gaps = 0/24 (0%)

Query  39  DTDTELVTETLVEEVSIDGMCGVY  62
           D DT+LV E+LVEEVSIDGMCGVY
Sbjct  20  DADTDLVGESLVEEVSIDGMCGVY  43


>gi|315445990|ref|YP_004078869.1| hypothetical protein Mspyr1_44800 [Mycobacterium sp. Spyr1]
 gi|315264293|gb|ADU01035.1| hypothetical protein Mspyr1_44800 [Mycobacterium sp. Spyr1]
Length=30

 Score = 41.6 bits (96),  Expect = 0.042, Method: Compositional matrix adjust.
 Identities = 19/20 (95%), Positives = 20/20 (100%), Gaps = 0/20 (0%)

Query  43  ELVTETLVEEVSIDGMCGVY  62
           ELVTE+LVEEVSIDGMCGVY
Sbjct  11  ELVTESLVEEVSIDGMCGVY  30


>gi|326384862|ref|ZP_08206537.1| hypothetical protein SCNU_18052 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326196381|gb|EGD53580.1| hypothetical protein SCNU_18052 [Gordonia neofelifaecis NRRL 
B-59395]
Length=33

 Score = 41.2 bits (95),  Expect = 0.054, Method: Compositional matrix adjust.
 Identities = 19/28 (68%), Positives = 21/28 (75%), Gaps = 0/28 (0%)

Query  35  DYETDTDTELVTETLVEEVSIDGMCGVY  62
           D    T  +LV E+LVEEVSIDGMCGVY
Sbjct  6   DQANATQQDLVAESLVEEVSIDGMCGVY  33


>gi|288919786|ref|ZP_06414111.1| hypothetical protein FrEUN1fDRAFT_3808 [Frankia sp. EUN1f]
 gi|288348794|gb|EFC83046.1| hypothetical protein FrEUN1fDRAFT_3808 [Frankia sp. EUN1f]
Length=56

 Score = 39.7 bits (91),  Expect = 0.16, Method: Compositional matrix adjust.
 Identities = 18/33 (55%), Positives = 23/33 (70%), Gaps = 0/33 (0%)

Query  30  KAIQMDYETDTDTELVTETLVEEVSIDGMCGVY  62
            A Q+ +    +  LV +TL+EEVSIDGMCGVY
Sbjct  24  PAAQIHHVHGAEAPLVEDTLIEEVSIDGMCGVY  56


>gi|312140961|ref|YP_004008297.1| hypothetical protein REQ_36290 [Rhodococcus equi 103S]
 gi|311890300|emb|CBH49618.1| hypothetical protein REQ_36290 [Rhodococcus equi 103S]
Length=38

 Score = 38.9 bits (89),  Expect = 0.23, Method: Compositional matrix adjust.
 Identities = 17/23 (74%), Positives = 20/23 (87%), Gaps = 0/23 (0%)

Query  40  TDTELVTETLVEEVSIDGMCGVY  62
            ++ LV E+LVEEVSIDGMCGVY
Sbjct  16  NESSLVEESLVEEVSIDGMCGVY  38


>gi|331699424|ref|YP_004335663.1| hypothetical protein Psed_5683 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326954113|gb|AEA27810.1| hypothetical protein Psed_5683 [Pseudonocardia dioxanivorans 
CB1190]
Length=35

 Score = 38.9 bits (89),  Expect = 0.23, Method: Compositional matrix adjust.
 Identities = 18/19 (95%), Positives = 18/19 (95%), Gaps = 0/19 (0%)

Query  44  LVTETLVEEVSIDGMCGVY  62
           LV ETLVEEVSIDGMCGVY
Sbjct  17  LVEETLVEEVSIDGMCGVY  35


>gi|226305286|ref|YP_002765244.1| hypothetical protein RER_17970 [Rhodococcus erythropolis PR4]
 gi|229490530|ref|ZP_04384368.1| hypothetical protein RHOER0001_5961 [Rhodococcus erythropolis 
SK121]
 gi|226184401|dbj|BAH32505.1| hypothetical protein RER_17970 [Rhodococcus erythropolis PR4]
 gi|229322350|gb|EEN88133.1| hypothetical protein RHOER0001_5961 [Rhodococcus erythropolis 
SK121]
Length=55

 Score = 38.9 bits (89),  Expect = 0.25, Method: Compositional matrix adjust.
 Identities = 17/22 (78%), Positives = 20/22 (91%), Gaps = 0/22 (0%)

Query  41  DTELVTETLVEEVSIDGMCGVY  62
           + +LV E+LVEEVSIDGMCGVY
Sbjct  34  ENDLVEESLVEEVSIDGMCGVY  55


>gi|54025411|ref|YP_119653.1| hypothetical protein nfa34410 [Nocardia farcinica IFM 10152]
 gi|54016919|dbj|BAD58289.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=154

 Score = 38.5 bits (88),  Expect = 0.37, Method: Compositional matrix adjust.
 Identities = 16/22 (73%), Positives = 20/22 (91%), Gaps = 0/22 (0%)

Query  41   DTELVTETLVEEVSIDGMCGVY  62
            ++ +V ETL+EEVSIDGMCGVY
Sbjct  133  NSAVVDETLIEEVSIDGMCGVY  154


>gi|284993285|ref|YP_003411840.1| hypothetical protein Gobs_4938 [Geodermatophilus obscurus DSM 
43160]
 gi|284066531|gb|ADB77469.1| conserved hypothetical protein [Geodermatophilus obscurus DSM 
43160]
Length=37

 Score = 37.7 bits (86),  Expect = 0.52, Method: Compositional matrix adjust.
 Identities = 17/19 (90%), Positives = 18/19 (95%), Gaps = 0/19 (0%)

Query  44  LVTETLVEEVSIDGMCGVY  62
           LV E+LVEEVSIDGMCGVY
Sbjct  19  LVEESLVEEVSIDGMCGVY  37


>gi|111222982|ref|YP_713776.1| hypothetical protein FRAAL3570 [Frankia alni ACN14a]
 gi|111150514|emb|CAJ62213.1| conserved hypothetical protein [Frankia alni ACN14a]
Length=38

 Score = 37.7 bits (86),  Expect = 0.66, Method: Compositional matrix adjust.
 Identities = 18/35 (52%), Positives = 25/35 (72%), Gaps = 1/35 (2%)

Query  29  RKAIQMDYETDTDTE-LVTETLVEEVSIDGMCGVY  62
            +++Q+D   +   E +V + LVEEVSIDGMCGVY
Sbjct  4   EESVQVDQAVEASAEPVVADLLVEEVSIDGMCGVY  38


>gi|326329211|ref|ZP_08195538.1| hypothetical protein NBCG_00646 [Nocardioidaceae bacterium Broad-1]
 gi|325953006|gb|EGD45019.1| hypothetical protein NBCG_00646 [Nocardioidaceae bacterium Broad-1]
Length=34

 Score = 37.0 bits (84),  Expect = 0.88, Method: Compositional matrix adjust.
 Identities = 16/24 (67%), Positives = 20/24 (84%), Gaps = 0/24 (0%)

Query  39  DTDTELVTETLVEEVSIDGMCGVY  62
           D  +++ TE L+EEVSIDGMCGVY
Sbjct  11  DIASDVATEDLIEEVSIDGMCGVY  34


>gi|269126597|ref|YP_003299967.1| hypothetical protein Tcur_2364 [Thermomonospora curvata DSM 43183]
 gi|268311555|gb|ACY97929.1| hypothetical protein Tcur_2364 [Thermomonospora curvata DSM 43183]
Length=39

 Score = 35.8 bits (81),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 0/20 (0%)

Query  43  ELVTETLVEEVSIDGMCGVY  62
           E   E+L+EEVSIDGMCGVY
Sbjct  20  EAAVESLIEEVSIDGMCGVY  39


>gi|134098951|ref|YP_001104612.1| hypothetical protein SACE_2387 [Saccharopolyspora erythraea NRRL 
2338]
 gi|291006811|ref|ZP_06564784.1| hypothetical protein SeryN2_20008 [Saccharopolyspora erythraea 
NRRL 2338]
 gi|133911574|emb|CAM01687.1| hypothetical protein SACE_2387 [Saccharopolyspora erythraea NRRL 
2338]
Length=35

 Score = 35.0 bits (79),  Expect = 4.1, Method: Compositional matrix adjust.
 Identities = 16/18 (89%), Positives = 16/18 (89%), Gaps = 0/18 (0%)

Query  45  VTETLVEEVSIDGMCGVY  62
           V E LVEEVSIDGMCGVY
Sbjct  18  VEELLVEEVSIDGMCGVY  35



Lambda     K      H
   0.323    0.135    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 131656912128


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40