BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0692
Length=109
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607832|ref|NP_215206.1| hypothetical protein Rv0692 [Mycoba... 224 4e-57
gi|148821897|ref|YP_001286651.1| hypothetical protein TBFG_10706... 222 1e-56
gi|340625711|ref|YP_004744163.1| hypothetical protein MCAN_06931... 221 4e-56
gi|15840097|ref|NP_335134.1| hypothetical protein MT0719.2 [Myco... 211 3e-53
gi|254822795|ref|ZP_05227796.1| hypothetical protein MintA_22889... 172 1e-41
gi|240167693|ref|ZP_04746352.1| hypothetical protein MkanA1_0015... 164 5e-39
gi|342861782|ref|ZP_08718427.1| hypothetical protein MCOL_22950 ... 162 1e-38
gi|41410250|ref|NP_963086.1| hypothetical protein MAP4152 [Mycob... 162 2e-38
gi|183981041|ref|YP_001849332.1| hypothetical protein MMAR_1020 ... 161 3e-38
gi|118616556|ref|YP_904888.1| hypothetical protein MUL_0772 [Myc... 159 1e-37
gi|118464613|ref|YP_883614.1| hypothetical protein MAV_4479 [Myc... 158 2e-37
gi|296168546|ref|ZP_06850350.1| conserved hypothetical protein [... 149 2e-34
gi|145225637|ref|YP_001136315.1| hypothetical protein Mflv_5061 ... 142 2e-32
gi|120402306|ref|YP_952135.1| hypothetical protein Mvan_1295 [My... 139 2e-31
gi|108797973|ref|YP_638170.1| hypothetical protein Mmcs_1000 [My... 137 4e-31
gi|118471463|ref|YP_885805.1| hypothetical protein MSMEG_1422 [M... 135 3e-30
gi|333991989|ref|YP_004524603.1| hypothetical protein JDM601_334... 129 1e-28
gi|226365538|ref|YP_002783321.1| hypothetical protein ROP_61290 ... 122 2e-26
gi|226305287|ref|YP_002765245.1| hypothetical protein RER_17980 ... 122 3e-26
gi|229490568|ref|ZP_04384406.1| conserved hypothetical protein [... 121 3e-26
gi|111023034|ref|YP_706006.1| hypothetical protein RHA1_ro06071 ... 120 8e-26
gi|325675403|ref|ZP_08155087.1| hypothetical protein HMPREF0724_... 119 1e-25
gi|312140960|ref|YP_004008296.1| hypothetical protein REQ_36280 ... 118 3e-25
gi|269126596|ref|YP_003299966.1| hypothetical protein Tcur_2363 ... 113 1e-23
gi|169630915|ref|YP_001704564.1| hypothetical protein MAB_3836c ... 110 6e-23
gi|326384861|ref|ZP_08206536.1| hypothetical protein SCNU_18047 ... 105 2e-21
gi|343927803|ref|ZP_08767271.1| hypothetical protein GOALK_097_0... 100 7e-20
gi|319951171|ref|ZP_08025015.1| hypothetical protein ES5_16064 [... 99.0 2e-19
gi|262203643|ref|YP_003274851.1| hypothetical protein Gbro_3779 ... 98.2 4e-19
gi|336178559|ref|YP_004583934.1| hypothetical protein FsymDg_265... 97.4 6e-19
gi|158315128|ref|YP_001507636.1| hypothetical protein Franean1_3... 94.7 4e-18
gi|302526438|ref|ZP_07278780.1| conserved hypothetical protein [... 94.0 6e-18
gi|331699423|ref|YP_004335662.1| hypothetical protein Psed_5682 ... 94.0 6e-18
gi|284993284|ref|YP_003411839.1| hypothetical protein Gobs_4937 ... 92.8 1e-17
gi|111222983|ref|YP_713777.1| hypothetical protein FRAAL3571 [Fr... 90.5 7e-17
gi|324999641|ref|ZP_08120753.1| hypothetical protein PseP1_12775... 89.0 2e-16
gi|288919785|ref|ZP_06414110.1| hypothetical protein FrEUN1fDRAF... 79.3 2e-13
gi|333921979|ref|YP_004495560.1| hypothetical protein AS9A_4327 ... 79.3 2e-13
gi|158315013|ref|YP_001507521.1| hypothetical protein Franean1_3... 79.0 2e-13
gi|333922023|ref|YP_004495604.1| hypothetical protein AS9A_4372 ... 76.6 1e-12
gi|134098952|ref|YP_001104613.1| hypothetical protein SACE_2388 ... 71.6 4e-11
gi|326329212|ref|ZP_08195539.1| hypothetical protein NBCG_00647 ... 71.2 4e-11
gi|258651021|ref|YP_003200177.1| hypothetical protein Namu_0774 ... 71.2 5e-11
gi|54024203|ref|YP_118445.1| hypothetical protein nfa22340 [Noca... 70.9 6e-11
gi|54025412|ref|YP_119654.1| hypothetical protein nfa34420 [Noca... 70.1 1e-10
gi|312194880|ref|YP_004014941.1| hypothetical protein FraEuI1c_0... 66.6 1e-09
gi|340530577|gb|AEK45782.1| hypothetical protein RAM_36555 [Amyc... 46.2 0.001
gi|255322306|ref|ZP_05363452.1| D-methionine-binding lipoprotein... 40.0 0.11
gi|108805937|ref|YP_645874.1| hypothetical protein Rxyl_3155 [Ru... 39.3 0.18
gi|254415220|ref|ZP_05028982.1| hypothetical protein MC7420_2646... 37.7 0.63
>gi|15607832|ref|NP_215206.1| hypothetical protein Rv0692 [Mycobacterium tuberculosis H37Rv]
gi|31791876|ref|NP_854369.1| hypothetical protein Mb0711 [Mycobacterium bovis AF2122/97]
gi|121636613|ref|YP_976836.1| hypothetical protein BCG_0741 [Mycobacterium bovis BCG str. Pasteur
1173P2]
58 more sequence titles
Length=109
Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/109 (99%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 1 VWGLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI 60
+WGLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI
Sbjct 1 MWGLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI 60
Query 61 LAVVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT 109
LAVVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT
Sbjct 61 LAVVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT 109
>gi|148821897|ref|YP_001286651.1| hypothetical protein TBFG_10706 [Mycobacterium tuberculosis F11]
gi|148720424|gb|ABR05049.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
Length=109
Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/109 (99%), Positives = 108/109 (99%), Gaps = 0/109 (0%)
Query 1 VWGLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI 60
+WGLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI
Sbjct 1 MWGLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI 60
Query 61 LAVVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT 109
LAVVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVL GSNMLVPRQTT
Sbjct 61 LAVVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLTGSNMLVPRQTT 109
>gi|340625711|ref|YP_004744163.1| hypothetical protein MCAN_06931 [Mycobacterium canettii CIPT
140010059]
gi|340003901|emb|CCC43033.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=109
Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/109 (98%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 1 VWGLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI 60
+WGLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI
Sbjct 1 MWGLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI 60
Query 61 LAVVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT 109
LAVV+TLADYPDIRSACRGAGVDDCDQDPYLHAL+VLAGSNMLVPRQTT
Sbjct 61 LAVVRTLADYPDIRSACRGAGVDDCDQDPYLHALNVLAGSNMLVPRQTT 109
>gi|15840097|ref|NP_335134.1| hypothetical protein MT0719.2 [Mycobacterium tuberculosis CDC1551]
gi|308231615|ref|ZP_07413139.2| hypothetical protein TMAG_02574 [Mycobacterium tuberculosis SUMu001]
gi|308369982|ref|ZP_07419802.2| hypothetical protein TMBG_03393 [Mycobacterium tuberculosis SUMu002]
15 more sequence titles
Length=103
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/103 (99%), Positives = 103/103 (100%), Gaps = 0/103 (0%)
Query 7 VPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQT 66
+PAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQT
Sbjct 1 MPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQT 60
Query 67 LADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT 109
LADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT
Sbjct 61 LADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT 103
>gi|254822795|ref|ZP_05227796.1| hypothetical protein MintA_22889 [Mycobacterium intracellulare
ATCC 13950]
Length=113
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/108 (79%), Positives = 92/108 (86%), Gaps = 3/108 (2%)
Query 3 GLLTVPAPAQA---RRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRT 59
GLLTVPAPAQA R A + FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRT
Sbjct 3 GLLTVPAPAQAETARPAGDTVFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRT 62
Query 60 ILAVVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQ 107
IL VVQ+LA++PD+RSACR AG+DD Q PYLHAL VL S MLVPR+
Sbjct 63 ILTVVQSLAEHPDVRSACRAAGIDDAGQGPYLHALGVLVDSKMLVPRE 110
>gi|240167693|ref|ZP_04746352.1| hypothetical protein MkanA1_00155 [Mycobacterium kansasii ATCC
12478]
Length=113
Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/92 (83%), Positives = 83/92 (91%), Gaps = 0/92 (0%)
Query 16 ADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRS 75
+ +SEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI+ VVQ+LADYPD+RS
Sbjct 20 SSASEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTIVTVVQSLADYPDVRS 79
Query 76 ACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQ 107
ACRGAGV D Q PYLHAL VLA S ML+PR+
Sbjct 80 ACRGAGVADSGQAPYLHALGVLAASTMLIPRE 111
>gi|342861782|ref|ZP_08718427.1| hypothetical protein MCOL_22950 [Mycobacterium colombiense CECT
3035]
gi|342130599|gb|EGT83903.1| hypothetical protein MCOL_22950 [Mycobacterium colombiense CECT
3035]
Length=108
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 90/105 (86%), Gaps = 2/105 (1%)
Query 3 GLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILA 62
GLLTVPA A+ ++ FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTIL
Sbjct 3 GLLTVPA--SAQARAAAPFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILT 60
Query 63 VVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQ 107
VVQ+LAD+PDIRSACR AGVDD Q PYLHAL VL SNMLVPR+
Sbjct 61 VVQSLADHPDIRSACRAAGVDDAAQPPYLHALGVLVESNMLVPRK 105
>gi|41410250|ref|NP_963086.1| hypothetical protein MAP4152 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254776915|ref|ZP_05218431.1| hypothetical protein MaviaA2_19921 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41399084|gb|AAS06702.1| hypothetical protein MAP_4152 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460676|gb|EGO39567.1| mycofactocin system RPExFGAL protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length=109
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/105 (80%), Positives = 89/105 (85%), Gaps = 1/105 (0%)
Query 3 GLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILA 62
GLLTVPA RA + FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTIL
Sbjct 3 GLLTVPA-PAQARAAGAAFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILT 61
Query 63 VVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQ 107
VVQ+LA+YPD+R ACR AG+DD Q PYLHAL VLA SNMLVPR+
Sbjct 62 VVQSLAEYPDVRCACRAAGIDDAGQAPYLHALGVLADSNMLVPRE 106
>gi|183981041|ref|YP_001849332.1| hypothetical protein MMAR_1020 [Mycobacterium marinum M]
gi|183174367|gb|ACC39477.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=103
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/88 (86%), Positives = 83/88 (95%), Gaps = 0/88 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVV++LAD+PD+RSACR A
Sbjct 14 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVRSLADHPDVRSACRAA 73
Query 81 GVDDCDQDPYLHALSVLAGSNMLVPRQT 108
GVDD + PYLHALSVLAGS+MLVP++
Sbjct 74 GVDDSEHAPYLHALSVLAGSHMLVPQEA 101
>gi|118616556|ref|YP_904888.1| hypothetical protein MUL_0772 [Mycobacterium ulcerans Agy99]
gi|118568666|gb|ABL03417.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=109
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/106 (78%), Positives = 91/106 (86%), Gaps = 1/106 (0%)
Query 3 GLLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILA 62
GLLTVPA A + FDPDRGWRLH QVAVRPEPFGALLYHFGTRKLSFLKNRTILA
Sbjct 3 GLLTVPA-PAQAAAGAGAFDPDRGWRLHAQVAVRPEPFGALLYHFGTRKLSFLKNRTILA 61
Query 63 VVQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQT 108
VV++LAD+PD+RSACR AGVDD + PYLHALSVLAGS+MLVP++
Sbjct 62 VVRSLADHPDVRSACRAAGVDDSEHAPYLHALSVLAGSHMLVPQEA 107
>gi|118464613|ref|YP_883614.1| hypothetical protein MAV_4479 [Mycobacterium avium 104]
gi|118165900|gb|ABK66797.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=103
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/87 (86%), Positives = 79/87 (91%), Gaps = 0/87 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTIL VVQ+LA+YPD+R ACR A
Sbjct 14 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILTVVQSLAEYPDVRCACRAA 73
Query 81 GVDDCDQDPYLHALSVLAGSNMLVPRQ 107
G+DD Q PYLHAL VLA SNMLVPR+
Sbjct 74 GIDDAGQAPYLHALGVLADSNMLVPRE 100
>gi|296168546|ref|ZP_06850350.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896609|gb|EFG76248.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=90
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/88 (79%), Positives = 77/88 (88%), Gaps = 0/88 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTIL VV++LA++PD+ SACR A
Sbjct 2 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILTVVRSLAEHPDVHSACRAA 61
Query 81 GVDDCDQDPYLHALSVLAGSNMLVPRQT 108
GVD + PYLHAL VLA S MLVP++
Sbjct 62 GVDGAGEAPYLHALGVLADSKMLVPQEV 89
>gi|145225637|ref|YP_001136315.1| hypothetical protein Mflv_5061 [Mycobacterium gilvum PYR-GCK]
gi|315445989|ref|YP_004078868.1| hypothetical protein Mspyr1_44790 [Mycobacterium sp. Spyr1]
gi|145218123|gb|ABP47527.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315264292|gb|ADU01034.1| hypothetical protein Mspyr1_44790 [Mycobacterium sp. Spyr1]
Length=96
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/84 (78%), Positives = 71/84 (85%), Gaps = 0/84 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FD DR WRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI+ V+ +L+D+PD RSACR A
Sbjct 8 FDADRNWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTIVEVINSLSDHPDARSACRAA 67
Query 81 GVDDCDQDPYLHALSVLAGSNMLV 104
G+DD PYLHAL VL SNMLV
Sbjct 68 GIDDSQLAPYLHALGVLVQSNMLV 91
>gi|120402306|ref|YP_952135.1| hypothetical protein Mvan_1295 [Mycobacterium vanbaalenii PYR-1]
gi|119955124|gb|ABM12129.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=96
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 71/84 (85%), Gaps = 0/84 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FD DR WRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTI+ V+ +L+D+PD RSACR A
Sbjct 6 FDADRHWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTIVEVINSLSDHPDARSACRAA 65
Query 81 GVDDCDQDPYLHALSVLAGSNMLV 104
G++D DQ PY HAL VL S ML+
Sbjct 66 GIEDGDQAPYFHALGVLVQSQMLI 89
>gi|108797973|ref|YP_638170.1| hypothetical protein Mmcs_1000 [Mycobacterium sp. MCS]
gi|119867069|ref|YP_937021.1| hypothetical protein Mkms_1017 [Mycobacterium sp. KMS]
gi|126433635|ref|YP_001069326.1| hypothetical protein Mjls_1027 [Mycobacterium sp. JLS]
gi|108768392|gb|ABG07114.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693158|gb|ABL90231.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126233435|gb|ABN96835.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=95
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/89 (75%), Positives = 72/89 (81%), Gaps = 0/89 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FDPD WRLH QVAVRPEPFGALLYHFGTRKLSFLKNRTI+ VV +LAD+ D RSACR A
Sbjct 7 FDPDLRWRLHHQVAVRPEPFGALLYHFGTRKLSFLKNRTIVDVVNSLADHRDARSACRAA 66
Query 81 GVDDCDQDPYLHALSVLAGSNMLVPRQTT 109
G+DD Q PYLHAL VL S MLV +T+
Sbjct 67 GIDDAQQAPYLHALGVLVQSKMLVCEETS 95
>gi|118471463|ref|YP_885805.1| hypothetical protein MSMEG_1422 [Mycobacterium smegmatis str.
MC2 155]
gi|118172750|gb|ABK73646.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=102
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/90 (74%), Positives = 71/90 (79%), Gaps = 0/90 (0%)
Query 16 ADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRS 75
A+ FDPD WRLH QVAVRPEPFGALLYHFGTRKLSFLKNRT++ VV +LAD+PD RS
Sbjct 6 AEQITFDPDVSWRLHHQVAVRPEPFGALLYHFGTRKLSFLKNRTVVEVVNSLADHPDARS 65
Query 76 ACRGAGVDDCDQDPYLHALSVLAGSNMLVP 105
A AGV D Q PYLHAL VL SNMLVP
Sbjct 66 ALCAAGVADDQQAPYLHALGVLVQSNMLVP 95
>gi|333991989|ref|YP_004524603.1| hypothetical protein JDM601_3349 [Mycobacterium sp. JDM601]
gi|333487957|gb|AEF37349.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=105
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/88 (68%), Positives = 72/88 (82%), Gaps = 0/88 (0%)
Query 18 SSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSAC 77
+ FDPDRGWRLHPQV+VRPE FGALLYHFGTRKLSFLKN T++ +V +LA++PD RSAC
Sbjct 11 TDTFDPDRGWRLHPQVSVRPETFGALLYHFGTRKLSFLKNLTMVTLVTSLAEHPDARSAC 70
Query 78 RGAGVDDCDQDPYLHALSVLAGSNMLVP 105
R AG+D + YL AL VLA S++L+P
Sbjct 71 RAAGIDPGAESAYLRALGVLAASDILIP 98
>gi|226365538|ref|YP_002783321.1| hypothetical protein ROP_61290 [Rhodococcus opacus B4]
gi|226244028|dbj|BAH54376.1| hypothetical protein [Rhodococcus opacus B4]
Length=106
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/102 (59%), Positives = 72/102 (71%), Gaps = 0/102 (0%)
Query 4 LLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAV 63
+L + APA A + D D GW+LHPQVA+RPEPFGALLYHFGTRKLSFLKNRTI+AV
Sbjct 4 VLIMSAPASASVTGKAGIDLDVGWKLHPQVALRPEPFGALLYHFGTRKLSFLKNRTIVAV 63
Query 64 VQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVP 105
V++L + D RSA R G+ D Y AL LA S+M+VP
Sbjct 64 VESLPSHADARSALRAQGIGDDTAAQYARALGTLAESHMIVP 105
>gi|226305287|ref|YP_002765245.1| hypothetical protein RER_17980 [Rhodococcus erythropolis PR4]
gi|3873401|gb|AAC77477.1| unknown [Rhodococcus erythropolis]
gi|226184402|dbj|BAH32506.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=95
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/87 (67%), Positives = 68/87 (79%), Gaps = 0/87 (0%)
Query 19 SEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACR 78
S D D GW+LHPQVA+RPEPFGALLYHFGTRKLSFLKN TI+AVV+ L D+PD+RSA R
Sbjct 8 SALDLDAGWKLHPQVALRPEPFGALLYHFGTRKLSFLKNTTIVAVVKALPDHPDVRSALR 67
Query 79 GAGVDDCDQDPYLHALSVLAGSNMLVP 105
G++D Y ALS LA S+M+VP
Sbjct 68 AQGIEDDAAPQYARALSTLADSHMIVP 94
>gi|229490568|ref|ZP_04384406.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322388|gb|EEN88171.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=89
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/87 (67%), Positives = 68/87 (79%), Gaps = 0/87 (0%)
Query 19 SEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACR 78
S D D GW+LHPQVA+RPEPFGALLYHFGTRKLSFLKN TI+AVV+ L D+PD+RSA R
Sbjct 2 SALDLDAGWKLHPQVALRPEPFGALLYHFGTRKLSFLKNTTIVAVVKALPDHPDVRSALR 61
Query 79 GAGVDDCDQDPYLHALSVLAGSNMLVP 105
G++D Y ALS LA S+M+VP
Sbjct 62 AQGIEDDAAPQYARALSTLADSHMIVP 88
>gi|111023034|ref|YP_706006.1| hypothetical protein RHA1_ro06071 [Rhodococcus jostii RHA1]
gi|110822564|gb|ABG97848.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=106
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/102 (59%), Positives = 72/102 (71%), Gaps = 0/102 (0%)
Query 4 LLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAV 63
+L + APA A ++ D D GW+LHPQVA+RPEPFGALLYHFGTRKLSFLKNRTI+AV
Sbjct 4 VLIMSAPASPSVAGNAGIDLDVGWKLHPQVALRPEPFGALLYHFGTRKLSFLKNRTIVAV 63
Query 64 VQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVP 105
V+ L + D RSA R G+ D Y AL LA S+M+VP
Sbjct 64 VEALPSHADARSALRAQGIGDDAAAQYARALGTLAESHMIVP 105
>gi|325675403|ref|ZP_08155087.1| hypothetical protein HMPREF0724_12869 [Rhodococcus equi ATCC
33707]
gi|325553374|gb|EGD23052.1| hypothetical protein HMPREF0724_12869 [Rhodococcus equi ATCC
33707]
Length=106
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/102 (54%), Positives = 73/102 (72%), Gaps = 0/102 (0%)
Query 4 LLTVPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAV 63
+L V A + + D D W+LHPQVA+RPEPFGALLYHFGTRKLSFLKNRTI+ +
Sbjct 4 VLIVSEQALGSGSSAGTIDLDAAWKLHPQVALRPEPFGALLYHFGTRKLSFLKNRTIVEI 63
Query 64 VQTLADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVP 105
V++L +P++ +A R G+++ PYLHAL LA S+M+VP
Sbjct 64 VESLPQHPNVGAALRAHGIEEDAARPYLHALGTLADSHMIVP 105
>gi|312140960|ref|YP_004008296.1| hypothetical protein REQ_36280 [Rhodococcus equi 103S]
gi|311890299|emb|CBH49617.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=100
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/90 (58%), Positives = 69/90 (77%), Gaps = 0/90 (0%)
Query 16 ADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRS 75
+ + D D W+LHPQVA+RPEPFGALLYHFGTRKLSFLKNRTI+ +V++L +P++ +
Sbjct 10 SSAGTIDLDAAWKLHPQVALRPEPFGALLYHFGTRKLSFLKNRTIVEIVESLPQHPNVGA 69
Query 76 ACRGAGVDDCDQDPYLHALSVLAGSNMLVP 105
A R G+++ PYLHAL LA S+M+VP
Sbjct 70 ALRAHGIEEDAARPYLHALGTLADSHMIVP 99
>gi|269126596|ref|YP_003299966.1| hypothetical protein Tcur_2363 [Thermomonospora curvata DSM 43183]
gi|268311554|gb|ACY97928.1| hypothetical protein Tcur_2363 [Thermomonospora curvata DSM 43183]
Length=91
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/86 (67%), Positives = 63/86 (74%), Gaps = 0/86 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
D DR W LHPQV+VRPEPFGALLYHFGTRKLSFLK+R +LAV+Q LA P R+AC A
Sbjct 4 IDLDRAWDLHPQVSVRPEPFGALLYHFGTRKLSFLKDRRLLAVLQALAQAPTARAACTAA 63
Query 81 GVDDCDQDPYLHALSVLAGSNMLVPR 106
GVD D Y AL LA S+MLV R
Sbjct 64 GVDAGDLPAYRAALGALADSSMLVER 89
>gi|169630915|ref|YP_001704564.1| hypothetical protein MAB_3836c [Mycobacterium abscessus ATCC
19977]
gi|169242882|emb|CAM63910.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=101
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/87 (61%), Positives = 64/87 (74%), Gaps = 0/87 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FD R W+LH QV++RPEPFGALLYHFGTRKLSFLKNRT+L +VQ+LA++ SA A
Sbjct 12 FDWTRPWQLHSQVSLRPEPFGALLYHFGTRKLSFLKNRTLLQIVQSLAEHRSAESAWLAA 71
Query 81 GVDDCDQDPYLHALSVLAGSNMLVPRQ 107
GV D Y AL+VLA S M+V R+
Sbjct 72 GVADGQVSAYQQALTVLADSQMIVTRE 98
>gi|326384861|ref|ZP_08206536.1| hypothetical protein SCNU_18047 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196380|gb|EGD53579.1| hypothetical protein SCNU_18047 [Gordonia neofelifaecis NRRL
B-59395]
Length=124
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/97 (52%), Positives = 67/97 (70%), Gaps = 0/97 (0%)
Query 13 ARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPD 72
A S+ FD R WRL+P+VA+RPEPFGALLYHFGTRKLSFLKN ++ +VQ LAD+
Sbjct 13 AAAGSSTPFDVSRAWRLNPKVALRPEPFGALLYHFGTRKLSFLKNLVVVDLVQALADHDS 72
Query 73 IRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT 109
+A G+ D ++ YL AL+ L+ S M+V R ++
Sbjct 73 ADAAMAAIGIADAERPLYLQALTALSESGMIVERSSS 109
>gi|343927803|ref|ZP_08767271.1| hypothetical protein GOALK_097_02330 [Gordonia alkanivorans NBRC
16433]
gi|343762444|dbj|GAA14197.1| hypothetical protein GOALK_097_02330 [Gordonia alkanivorans NBRC
16433]
Length=119
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/86 (56%), Positives = 60/86 (70%), Gaps = 0/86 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FD W L+P+VA+RPEPFGALLYHFGTRKLSFLKN T++ +VQ+LAD+ +A A
Sbjct 32 FDTFAAWELNPKVALRPEPFGALLYHFGTRKLSFLKNLTVVGIVQSLADHDSAEAALLAA 91
Query 81 GVDDCDQDPYLHALSVLAGSNMLVPR 106
GV + Y AL+ LA S M+ PR
Sbjct 92 GVTPAQRPLYEQALTALADSAMITPR 117
>gi|319951171|ref|ZP_08025015.1| hypothetical protein ES5_16064 [Dietzia cinnamea P4]
gi|319435159|gb|EFV90435.1| hypothetical protein ES5_16064 [Dietzia cinnamea P4]
Length=108
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/104 (59%), Positives = 72/104 (70%), Gaps = 4/104 (3%)
Query 4 LLTVPAPAQA-RRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILA 62
+ + APA A + A + FD D GWRLHP VA+RPEPFGALLYHF TRKLSFLK+ TI+
Sbjct 1 MTSAAAPAGAGQTAAPAAFDLDAGWRLHPGVALRPEPFGALLYHFHTRKLSFLKSPTIVE 60
Query 63 VVQTLADYPDIRSACRGAGV---DDCDQDPYLHALSVLAGSNML 103
VV+TLAD+P R+AC AGV D YLHAL LA S M+
Sbjct 61 VVRTLADHPTARAACAAAGVPIDDPGTARLYLHALGQLAASRMI 104
>gi|262203643|ref|YP_003274851.1| hypothetical protein Gbro_3779 [Gordonia bronchialis DSM 43247]
gi|262086990|gb|ACY22958.1| hypothetical protein Gbro_3779 [Gordonia bronchialis DSM 43247]
Length=117
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/88 (53%), Positives = 60/88 (69%), Gaps = 0/88 (0%)
Query 20 EFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRG 79
EFD W L+P+VA+RPEPFGALLYHFGTRKLSFLKN T++ +VQ+L + +A
Sbjct 24 EFDTLDAWELNPKVALRPEPFGALLYHFGTRKLSFLKNLTVVGIVQSLREADSAEAALLA 83
Query 80 AGVDDCDQDPYLHALSVLAGSNMLVPRQ 107
AG+ + YL AL LA S M++ R+
Sbjct 84 AGITPAQRPLYLQALGALAESGMIIRRE 111
>gi|336178559|ref|YP_004583934.1| hypothetical protein FsymDg_2657 [Frankia symbiont of Datisca
glomerata]
gi|334859539|gb|AEH10013.1| hypothetical protein FsymDg_2657 [Frankia symbiont of Datisca
glomerata]
Length=113
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/97 (52%), Positives = 66/97 (69%), Gaps = 1/97 (1%)
Query 10 PAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLAD 69
P A RA +F D W+LHPQV+VRPEPFGAL+YHFGTR+LSFLK+ T+L +VQ L +
Sbjct 15 PTAAARA-VPDFALDAPWQLHPQVSVRPEPFGALVYHFGTRRLSFLKDPTLLRLVQALPE 73
Query 70 YPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPR 106
+P R A G+ + D Y AL+ LA ++M+V R
Sbjct 74 HPRARDAATAIGLTEADLPRYHRALATLAATSMIVER 110
>gi|158315128|ref|YP_001507636.1| hypothetical protein Franean1_3327 [Frankia sp. EAN1pec]
gi|158110533|gb|ABW12730.1| conserved hypothetical protein [Frankia sp. EAN1pec]
Length=100
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/92 (53%), Positives = 60/92 (66%), Gaps = 0/92 (0%)
Query 16 ADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRS 75
A S FD D W + QV++RPE FGALLYHFGTR+LSFLK+ +L VVQ LAD+P R+
Sbjct 7 ARPSPFDLDAAWYVPAQVSIRPERFGALLYHFGTRRLSFLKSPGLLKVVQVLADFPTARA 66
Query 76 ACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQ 107
AC GV + Y AL+ LA S M+ R+
Sbjct 67 ACADVGVSAAELPAYRAALATLAASEMIRERK 98
>gi|302526438|ref|ZP_07278780.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302435333|gb|EFL07149.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=97
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/90 (55%), Positives = 63/90 (70%), Gaps = 0/90 (0%)
Query 18 SSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSAC 77
++ FD D W L +V++RPE FGALLYHFGTR+LSFLK+RT+LA VQ L D+P R+AC
Sbjct 7 AAAFDLDGAWELDSRVSIRPERFGALLYHFGTRRLSFLKSRTMLAAVQALTDHPSARAAC 66
Query 78 RGAGVDDCDQDPYLHALSVLAGSNMLVPRQ 107
AGV + Y AL+ LA S+M+ PR
Sbjct 67 AKAGVSQAELPRYRAALAALAASDMIHPRS 96
>gi|331699423|ref|YP_004335662.1| hypothetical protein Psed_5682 [Pseudonocardia dioxanivorans
CB1190]
gi|326954112|gb|AEA27809.1| hypothetical protein Psed_5682 [Pseudonocardia dioxanivorans
CB1190]
Length=102
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/97 (51%), Positives = 63/97 (65%), Gaps = 1/97 (1%)
Query 13 ARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPD 72
A RAD FDP +R PQV++RPE FGAL+YHFGTRKLSFLK ++ VV L +PD
Sbjct 7 AGRADPG-FDPGAAYRCSPQVSLRPESFGALVYHFGTRKLSFLKTPQLVDVVTGLEKHPD 65
Query 73 IRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQTT 109
+ +A AGV + ++ YL AL+ LA S + R TT
Sbjct 66 VHAAIEAAGVAETERPAYLKALAGLAASGTIEARPTT 102
>gi|284993284|ref|YP_003411839.1| hypothetical protein Gobs_4937 [Geodermatophilus obscurus DSM
43160]
gi|284066530|gb|ADB77468.1| hypothetical protein Gobs_4937 [Geodermatophilus obscurus DSM
43160]
Length=128
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/99 (52%), Positives = 65/99 (66%), Gaps = 3/99 (3%)
Query 9 APAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLA 68
APA A AD FDP WR VA+RPEPFGAL+YHFG RKLSFLK++T++AVV+TLA
Sbjct 30 APAPASTAD---FDPSLPWRRARTVALRPEPFGALVYHFGNRKLSFLKSKTLVAVVETLA 86
Query 69 DYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPRQ 107
++P + GV D Y AL+ LA S+M+ R+
Sbjct 87 EHPSADATLAACGVPDAQLPAYRRALADLARSHMIELRE 125
>gi|111222983|ref|YP_713777.1| hypothetical protein FRAAL3571 [Frankia alni ACN14a]
gi|111150515|emb|CAJ62214.1| conserved hypothetical protein [Frankia alni ACN14a]
Length=105
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/88 (56%), Positives = 59/88 (68%), Gaps = 0/88 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FD DR WRLHPQV+VRPE FGALLYHFGTRKLSFLK +LA+V+ L + R+A
Sbjct 17 FDLDRAWRLHPQVSVRPESFGALLYHFGTRKLSFLKEPGLLALVEALPAHASARAAADAV 76
Query 81 GVDDCDQDPYLHALSVLAGSNMLVPRQT 108
G+ D Y AL+ LA S+M+V T
Sbjct 77 GLPAADLGRYQRALATLAASSMIVEGST 104
>gi|324999641|ref|ZP_08120753.1| hypothetical protein PseP1_12775 [Pseudonocardia sp. P1]
Length=107
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query 7 VPAPAQARRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQT 66
VP+P+ A S FDP +RL V++RPEPFGAL+Y F TRKLSFLK ++ VV+
Sbjct 10 VPSPSSDGAAGS--FDPAAPYRLSESVSLRPEPFGALVYDFTTRKLSFLKTVQLVEVVRG 67
Query 67 LADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPR 106
LAD PD RSA AGV + YL AL+ L S +V R
Sbjct 68 LADQPDARSAVEAAGVPAAQHEAYLKALAGLLQSRTIVAR 107
>gi|288919785|ref|ZP_06414110.1| hypothetical protein FrEUN1fDRAFT_3807 [Frankia sp. EUN1f]
gi|288348793|gb|EFC83045.1| hypothetical protein FrEUN1fDRAFT_3807 [Frankia sp. EUN1f]
Length=109
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/84 (49%), Positives = 52/84 (62%), Gaps = 0/84 (0%)
Query 24 DRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGAGVD 83
D W L VA+RPE FGAL YHFG R+L FLK R ++ VV+ L D PD R+A R AGV
Sbjct 12 DAAWELSRSVALRPESFGALAYHFGNRRLIFLKRRELVEVVRGLGDAPDARTALRRAGVP 71
Query 84 DCDQDPYLHALSVLAGSNMLVPRQ 107
+ AL LA ++++ PRQ
Sbjct 72 AEQWASFAAALRGLADADVIRPRQ 95
>gi|333921979|ref|YP_004495560.1| hypothetical protein AS9A_4327 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484200|gb|AEF42760.1| hypothetical protein AS9A_4327 [Amycolicicoccus subflavus DQS3-9A1]
Length=105
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/87 (44%), Positives = 55/87 (64%), Gaps = 0/87 (0%)
Query 18 SSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSAC 77
+ FDP + L V+VRPEPFGAL+Y F TR+L+FLK+ ++ VV+TL ++ + A
Sbjct 13 TEAFDPHSRYALSASVSVRPEPFGALIYDFHTRRLAFLKSPQLVTVVRTLHNHRSVHGAL 72
Query 78 RGAGVDDCDQDPYLHALSVLAGSNMLV 104
AGV + D YLHAL+ LA + +
Sbjct 73 AAAGVREADHPHYLHALAGLAATGTIT 99
>gi|158315013|ref|YP_001507521.1| hypothetical protein Franean1_3207 [Frankia sp. EAN1pec]
gi|158110418|gb|ABW12615.1| conserved hypothetical protein [Frankia sp. EAN1pec]
Length=103
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/82 (49%), Positives = 52/82 (64%), Gaps = 0/82 (0%)
Query 22 DPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGAG 81
D D W L VA+RPEPFGAL YHFG R+L FLK R ++ VV+ L D PD+R+A AG
Sbjct 12 DLDEAWELSRSVALRPEPFGALAYHFGNRRLIFLKRRELVDVVRGLGDAPDVRTALTRAG 71
Query 82 VDDCDQDPYLHALSVLAGSNML 103
V Y+ AL LA ++++
Sbjct 72 VPAGQWAAYVRALRGLAEADVI 93
>gi|333922023|ref|YP_004495604.1| hypothetical protein AS9A_4372 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484245|gb|AEF42805.1| hypothetical protein AS9A_4372 [Amycolicicoccus subflavus DQS3-9A1]
Length=100
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (46%), Positives = 51/83 (62%), Gaps = 0/83 (0%)
Query 24 DRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGAGVD 83
GW L P VA+RPEPFGAL YHFG R+L+FLK ++ +V+ LA+ +R A A V
Sbjct 11 SEGWALSPSVALRPEPFGALAYHFGNRRLTFLKRPELVELVRGLAESDSVRGALSAADVP 70
Query 84 DCDQDPYLHALSVLAGSNMLVPR 106
YL AL LA ++M+ P+
Sbjct 71 AQQWPAYLKALRGLAAADMIRPQ 93
>gi|134098952|ref|YP_001104613.1| hypothetical protein SACE_2388 [Saccharopolyspora erythraea NRRL
2338]
gi|291006810|ref|ZP_06564783.1| hypothetical protein SeryN2_20003 [Saccharopolyspora erythraea
NRRL 2338]
gi|133911575|emb|CAM01688.1| hypothetical protein SACE_2388 [Saccharopolyspora erythraea NRRL
2338]
Length=74
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/72 (48%), Positives = 49/72 (69%), Gaps = 0/72 (0%)
Query 33 VAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGAGVDDCDQDPYLH 92
+A+RPEPFGAL YHFG R+LSFLK ++ VV+ L + ++A GV + +Q YL+
Sbjct 1 MALRPEPFGALAYHFGNRRLSFLKTPLLVTVVEGLHKHRSAQAALSAHGVTEHEQRAYLN 60
Query 93 ALSVLAGSNMLV 104
AL+ LA + M+V
Sbjct 61 ALASLARAEMIV 72
>gi|326329212|ref|ZP_08195539.1| hypothetical protein NBCG_00647 [Nocardioidaceae bacterium Broad-1]
gi|325953007|gb|EGD45020.1| hypothetical protein NBCG_00647 [Nocardioidaceae bacterium Broad-1]
Length=94
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/84 (48%), Positives = 52/84 (62%), Gaps = 0/84 (0%)
Query 24 DRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGAGVD 83
+ W L P VA+RPEPFGAL YHFG RKL+FLK ++ VV+ L +P + SA AG+
Sbjct 7 EEPWTLSPSVALRPEPFGALAYHFGNRKLTFLKRPELVEVVRLLEHHPRLGSALDAAGIP 66
Query 84 DCDQDPYLHALSVLAGSNMLVPRQ 107
D Y AL LA ++M+ PR
Sbjct 67 PEQHDAYAAALRALAETDMIRPRH 90
>gi|258651021|ref|YP_003200177.1| hypothetical protein Namu_0774 [Nakamurella multipartita DSM
44233]
gi|258554246|gb|ACV77188.1| hypothetical protein Namu_0774 [Nakamurella multipartita DSM
44233]
Length=104
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/89 (47%), Positives = 58/89 (66%), Gaps = 1/89 (1%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
F P+ + LHP V VRPEPFGALLY F TR+LSFLK+ ++ VV++LAD+P +A R A
Sbjct 16 FVPELPYELHPAVEVRPEPFGALLYSFKTRRLSFLKDPDLVRVVRSLADHPTAAAALRAA 75
Query 81 GVDD-CDQDPYLHALSVLAGSNMLVPRQT 108
G+ D + AL+ LA ++ + R +
Sbjct 76 GITDPVRLTMFERALATLATTDTIRERAS 104
>gi|54024203|ref|YP_118445.1| hypothetical protein nfa22340 [Nocardia farcinica IFM 10152]
gi|54015711|dbj|BAD57081.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=96
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 42/55 (77%), Gaps = 0/55 (0%)
Query 17 DSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYP 71
++ FDP + +RL P VAVRPEPFGALLY + TR+LSFLK T++ VVQ+LA P
Sbjct 4 EARRFDPAQPYRLAPSVAVRPEPFGALLYDYTTRRLSFLKTPTLVRVVQSLATQP 58
>gi|54025412|ref|YP_119654.1| hypothetical protein nfa34420 [Nocardia farcinica IFM 10152]
gi|54016920|dbj|BAD58290.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=99
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/88 (47%), Positives = 54/88 (62%), Gaps = 0/88 (0%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
FDP R + L P V++RPEPFGAL+Y F TR+LSFLK ++ VV+ LA P +A A
Sbjct 6 FDPARAYALAPTVSIRPEPFGALVYDFVTRRLSFLKTPELVTVVRELAGQPTAVAALAAA 65
Query 81 GVDDCDQDPYLHALSVLAGSNMLVPRQT 108
GV YL AL+ L + + PR+T
Sbjct 66 GVPAEQHPGYLRALASLCQAGTIRPRET 93
>gi|312194880|ref|YP_004014941.1| hypothetical protein FraEuI1c_0998 [Frankia sp. EuI1c]
gi|311226216|gb|ADP79071.1| hypothetical protein FraEuI1c_0998 [Frankia sp. EuI1c]
Length=118
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query 8 PAPAQA-RRADSSEFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQT 66
P PA A +A FDP +RLHP+VA+RPE FGAL Y + TR+LS LK+ ++ VV+
Sbjct 21 PTPAHAVAKASGVTFDPALPYRLHPKVALRPERFGALAYSYATRRLSLLKDLDLVTVVRA 80
Query 67 LADYPDIRSACRGAGVDDCDQDPYLHALSVLAGSNMLVPR 106
L D P A A V + AL+ L + + PR
Sbjct 81 LGDAPSAGDAL--AAVPAAKRPAVERALARLVETGFVQPR 118
>gi|340530577|gb|AEK45782.1| hypothetical protein RAM_36555 [Amycolatopsis mediterranei S699]
Length=43
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/31 (68%), Positives = 25/31 (81%), Gaps = 0/31 (0%)
Query 33 VAVRPEPFGALLYHFGTRKLSFLKNRTILAV 63
+A+RPE FGALLYHFGTR+LSF K+ L V
Sbjct 1 MAIRPERFGALLYHFGTRRLSFFKSPAPLTV 31
>gi|255322306|ref|ZP_05363452.1| D-methionine-binding lipoprotein MetQ [Campylobacter showae RM3277]
gi|255300679|gb|EET79950.1| D-methionine-binding lipoprotein MetQ [Campylobacter showae RM3277]
Length=257
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/77 (32%), Positives = 35/77 (46%), Gaps = 2/77 (2%)
Query 21 FDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILAVVQTLADYPDIRSACRGA 80
F+ D+G + P V V EP GA Y + LS LKN I+A+ AD + A
Sbjct 85 FNKDKGTHIVPTVGVHVEPMGA--YSKKIKSLSELKNGDIIAISNNAADSTRSINLLEKA 142
Query 81 GVDDCDQDPYLHALSVL 97
G+ + Y L ++
Sbjct 143 GIVKAKEGEYKSPLDII 159
>gi|108805937|ref|YP_645874.1| hypothetical protein Rxyl_3155 [Rubrobacter xylanophilus DSM
9941]
gi|108767180|gb|ABG06062.1| hypothetical protein Rxyl_3155 [Rubrobacter xylanophilus DSM
9941]
Length=92
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/83 (35%), Positives = 42/83 (51%), Gaps = 8/83 (9%)
Query 27 WRLHPQVAVRPEPFGALLYHFGTRKLSFLKNR------TILAVVQTLADYPDIRSACRGA 80
+RL P+V+VRPE FG LLY R L FL++R L +TLA+ +A R
Sbjct 9 FRLAPRVSVRPERFGGLLYRHDDRALLFLRSRPLVDLLLGLDGTRTLAEALSELAAER-- 66
Query 81 GVDDCDQDPYLHALSVLAGSNML 103
G+++ + AL L M+
Sbjct 67 GLEEGELRTIKKALGRLKERGMI 89
>gi|254415220|ref|ZP_05028982.1| hypothetical protein MC7420_2646 [Microcoleus chthonoplastes
PCC 7420]
gi|196178026|gb|EDX73028.1| hypothetical protein MC7420_2646 [Microcoleus chthonoplastes
PCC 7420]
Length=40
Score = 37.7 bits (86), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/28 (54%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 78 RGAGVDDCDQDPYLHALSVLAGSNMLVP 105
R VD CD+DP+LH LS++AG +L+P
Sbjct 9 RNNEVDQCDRDPFLHLLSIVAGFLVLIP 36
Lambda K H
0.323 0.138 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129509500864
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40