BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0700
Length=101
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607840|ref|NP_215214.1| 30S ribosomal protein S10 [Mycobact... 203 6e-51
gi|118616570|ref|YP_904902.1| 30S ribosomal protein S10 [Mycobac... 203 8e-51
gi|41410258|ref|NP_963094.1| 30S ribosomal protein S10 [Mycobact... 203 9e-51
gi|237786396|ref|YP_002907101.1| 30S ribosomal protein S10 [Cory... 202 1e-50
gi|15828003|ref|NP_302266.1| 30S ribosomal protein S10 [Mycobact... 201 2e-50
gi|108797985|ref|YP_638182.1| 30S ribosomal protein S10 [Mycobac... 201 2e-50
gi|336326440|ref|YP_004606406.1| 30S ribosomal protein S10 [Cory... 200 7e-50
gi|296392584|ref|YP_003657468.1| 30S ribosomal protein S10 [Segn... 199 1e-49
gi|54022699|ref|YP_116941.1| 30S ribosomal protein S10 [Nocardia... 199 1e-49
gi|258651362|ref|YP_003200518.1| 30S ribosomal protein S10 [Naka... 198 2e-49
gi|317507408|ref|ZP_07965142.1| ribosomal protein S10 [Segnilipa... 198 2e-49
gi|68536924|ref|YP_251629.1| 30S ribosomal protein S10 [Coryneba... 198 2e-49
gi|134103265|ref|YP_001108926.1| 30S ribosomal protein S10 [Sacc... 198 3e-49
gi|23492357|dbj|BAC17331.1| putative 30S ribosomal protein S10 [... 197 3e-49
gi|300782607|ref|YP_003762898.1| 30S ribosomal protein S10 [Amyc... 197 3e-49
gi|41324734|emb|CAF19216.1| RIBOSOMAL PROTEIN S10 [Corynebacteri... 197 4e-49
gi|259506794|ref|ZP_05749694.1| 30S ribosomal protein S10 [Coryn... 197 4e-49
gi|284992875|ref|YP_003411429.1| 30S ribosomal protein S10 [Geod... 197 6e-49
gi|227487124|ref|ZP_03917440.1| 30S ribosomal protein S10 [Coryn... 197 6e-49
gi|19551745|ref|NP_599747.1| 30S ribosomal protein S10 [Coryneba... 196 9e-49
gi|38233084|ref|NP_938851.1| 30S ribosomal protein S10 [Coryneba... 195 2e-48
gi|306835218|ref|ZP_07468252.1| 30S ribosomal protein S10 [Coryn... 194 3e-48
gi|172039994|ref|YP_001799708.1| 30S ribosomal protein S10 [Cory... 194 4e-48
gi|225020385|ref|ZP_03709577.1| hypothetical protein CORMATOL_00... 193 7e-48
gi|227505217|ref|ZP_03935266.1| 30S ribosomal protein S10 [Coryn... 191 3e-47
gi|300779846|ref|ZP_07089702.1| 30S ribosomal protein S10 [Coryn... 191 3e-47
gi|297564036|ref|YP_003683009.1| ribosomal protein S10 [Nocardio... 188 3e-46
gi|152964656|ref|YP_001360440.1| 30S ribosomal protein S10 [Kine... 187 3e-46
gi|271962631|ref|YP_003336827.1| 30S ribosomal protein S10 [Stre... 187 5e-46
gi|256390139|ref|YP_003111703.1| 30S ribosomal protein S10 [Cate... 187 5e-46
gi|21223081|ref|NP_628860.1| 30S ribosomal protein S10 [Streptom... 186 7e-46
gi|269128517|ref|YP_003301887.1| 30S ribosomal protein S10 [Ther... 186 8e-46
gi|72163046|ref|YP_290703.1| 30S ribosomal protein S10 [Thermobi... 186 1e-45
gi|336116747|ref|YP_004571514.1| 30S ribosomal protein S10 [Micr... 186 1e-45
gi|119718126|ref|YP_925091.1| 30S ribosomal protein S10 [Nocardi... 185 1e-45
gi|345008569|ref|YP_004810923.1| 30S ribosomal protein S10 [Stre... 185 2e-45
gi|337767576|emb|CCB76287.1| ribosomal protein S10 (BS13) [Strep... 185 2e-45
gi|158317792|ref|YP_001510300.1| 30S ribosomal protein S10 [Fran... 185 2e-45
gi|284034003|ref|YP_003383934.1| 30S ribosomal protein S10 [Krib... 185 2e-45
gi|336179783|ref|YP_004585158.1| 30S ribosomal protein S10 [Fran... 184 3e-45
gi|86739294|ref|YP_479694.1| 30S ribosomal protein S10 [Frankia ... 184 3e-45
gi|311744810|ref|ZP_07718606.1| 30S ribosomal protein S10 [Aerom... 184 3e-45
gi|163840907|ref|YP_001625312.1| SSU ribosomal protein S10P [Ren... 184 4e-45
gi|296268549|ref|YP_003651181.1| 30S ribosomal protein S10 [Ther... 184 5e-45
gi|116671522|ref|YP_832455.1| 30S ribosomal protein S10 [Arthrob... 182 1e-44
gi|117927514|ref|YP_872065.1| 30S ribosomal protein S10 [Acidoth... 182 2e-44
gi|308178137|ref|YP_003917543.1| 30S ribosomal protein S10 [Arth... 182 2e-44
gi|296130496|ref|YP_003637746.1| ribosomal protein S10 [Cellulom... 181 3e-44
gi|2500434|sp|P72232.1|RS10_PLARO RecName: Full=30S ribosomal pr... 181 3e-44
gi|50843319|ref|YP_056546.1| 30S ribosomal protein S10 [Propioni... 181 3e-44
>gi|15607840|ref|NP_215214.1| 30S ribosomal protein S10 [Mycobacterium tuberculosis H37Rv]
gi|15840107|ref|NP_335144.1| 30S ribosomal protein S10 [Mycobacterium tuberculosis CDC1551]
gi|31791885|ref|NP_854378.1| 30S ribosomal protein S10 [Mycobacterium bovis AF2122/97]
89 more sequence titles
Length=101
Score = 203 bits (517), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/101 (99%), Positives = 101/101 (100%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|118616570|ref|YP_904902.1| 30S ribosomal protein S10 [Mycobacterium ulcerans Agy99]
gi|166231298|sp|A0PM62.1|RS10_MYCUA RecName: Full=30S ribosomal protein S10
gi|118568680|gb|ABL03431.1| 30S ribosomal protein S10, RpsJ [Mycobacterium ulcerans Agy99]
Length=101
Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/101 (99%), Positives = 101/101 (100%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCV+RSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVVRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|41410258|ref|NP_963094.1| 30S ribosomal protein S10 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118467320|ref|YP_883607.1| 30S ribosomal protein S10 [Mycobacterium avium 104]
gi|240167702|ref|ZP_04746361.1| 30S ribosomal protein S10 [Mycobacterium kansasii ATCC 12478]
11 more sequence titles
Length=101
Score = 203 bits (516), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/101 (99%), Positives = 101/101 (100%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|237786396|ref|YP_002907101.1| 30S ribosomal protein S10 [Corynebacterium kroppenstedtii DSM
44385]
gi|237759308|gb|ACR18558.1| 30S ribosomal protein S10 [Corynebacterium kroppenstedtii DSM
44385]
Length=108
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/101 (98%), Positives = 100/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
VAGQKIRIRLKAYDHEAIDASARKIVETV RTGA+VVGP+PLPTEKNVYCVIRSPHKYKD
Sbjct 8 VAGQKIRIRLKAYDHEAIDASARKIVETVTRTGATVVGPIPLPTEKNVYCVIRSPHKYKD 67
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ
Sbjct 68 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 108
>gi|15828003|ref|NP_302266.1| 30S ribosomal protein S10 [Mycobacterium leprae TN]
gi|221230480|ref|YP_002503896.1| 30S ribosomal protein S10 [Mycobacterium leprae Br4923]
gi|401038|sp|P30765.1|RS10_MYCLE RecName: Full=30S ribosomal protein S10
gi|254809976|sp|B8ZSC0.1|RS10_MYCLB RecName: Full=30S ribosomal protein S10
gi|581340|emb|CAA78676.1| ribosomal protein S10 [Mycobacterium leprae]
gi|13093556|emb|CAC30818.1| 30S ribosomal protein S10 [Mycobacterium leprae]
gi|219933587|emb|CAR71960.1| 30S ribosomal protein S10 [Mycobacterium leprae Br4923]
Length=101
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/101 (98%), Positives = 101/101 (100%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETVVRTGA+VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVVRTGANVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|108797985|ref|YP_638182.1| 30S ribosomal protein S10 [Mycobacterium sp. MCS]
gi|118473457|ref|YP_885818.1| 30S ribosomal protein S10 [Mycobacterium smegmatis str. MC2 155]
gi|119867081|ref|YP_937033.1| 30S ribosomal protein S10 [Mycobacterium sp. KMS]
24 more sequence titles
Length=101
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/101 (98%), Positives = 100/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETV RTGASVVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVTRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|336326440|ref|YP_004606406.1| 30S ribosomal protein S10 [Corynebacterium resistens DSM 45100]
gi|336102422|gb|AEI10242.1| 30S ribosomal protein S10 [Corynebacterium resistens DSM 45100]
Length=123
Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/101 (97%), Positives = 99/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
VAGQKIRIRLKAYDHEAIDASA+KIVETV RTGA VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 23 VAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTEKNVYCVIRSPHKYKD 82
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 83 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 123
>gi|296392584|ref|YP_003657468.1| 30S ribosomal protein S10 [Segniliparus rotundus DSM 44985]
gi|296179731|gb|ADG96637.1| ribosomal protein S10 [Segniliparus rotundus DSM 44985]
Length=101
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/101 (96%), Positives = 100/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETV RTGASVVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVTRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKR+IDI+DPTPKTVDALMRI+LPASVDVNIQ
Sbjct 61 SREHFEMRTHKRMIDILDPTPKTVDALMRINLPASVDVNIQ 101
>gi|54022699|ref|YP_116941.1| 30S ribosomal protein S10 [Nocardia farcinica IFM 10152]
gi|111023095|ref|YP_706067.1| 30S ribosomal protein S10 [Rhodococcus jostii RHA1]
gi|213964839|ref|ZP_03393038.1| ribosomal protein S10 [Corynebacterium amycolatum SK46]
34 more sequence titles
Length=101
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/101 (97%), Positives = 99/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETV RTGA VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVTRTGARVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|258651362|ref|YP_003200518.1| 30S ribosomal protein S10 [Nakamurella multipartita DSM 44233]
gi|258554587|gb|ACV77529.1| ribosomal protein S10 [Nakamurella multipartita DSM 44233]
Length=101
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/101 (96%), Positives = 99/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETV RTGA VVGPVPLPTEKNVYCV+RSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVTRTGARVVGPVPLPTEKNVYCVVRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|317507408|ref|ZP_07965142.1| ribosomal protein S10 [Segniliparus rugosus ATCC BAA-974]
gi|316254293|gb|EFV13629.1| ribosomal protein S10 [Segniliparus rugosus ATCC BAA-974]
Length=101
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/101 (95%), Positives = 100/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETV RTGASVVGPVPLPTEKNV+CVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVTRTGASVVGPVPLPTEKNVFCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKR+IDI+DPTPKTVDALMRI+LPASVDVNIQ
Sbjct 61 SREHFEMRTHKRMIDILDPTPKTVDALMRINLPASVDVNIQ 101
>gi|68536924|ref|YP_251629.1| 30S ribosomal protein S10 [Corynebacterium jeikeium K411]
gi|334564055|ref|ZP_08517046.1| 30S ribosomal protein S10 [Corynebacterium bovis DSM 20582]
gi|340795350|ref|YP_004760813.1| 30S ribosomal protein S10 [Corynebacterium variabile DSM 44702]
gi|109915156|sp|Q4JT46.1|RS10_CORJK RecName: Full=30S ribosomal protein S10
gi|68264523|emb|CAI38011.1| 30S ribosomal protein S10 [Corynebacterium jeikeium K411]
gi|340535260|gb|AEK37740.1| 30S ribosomal protein S10 [Corynebacterium variabile DSM 44702]
Length=101
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/101 (96%), Positives = 99/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASA+KIVETV RTGA VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|134103265|ref|YP_001108926.1| 30S ribosomal protein S10 [Saccharopolyspora erythraea NRRL 2338]
gi|291007942|ref|ZP_06565915.1| 30S ribosomal protein S10 [Saccharopolyspora erythraea NRRL 2338]
gi|166231776|sp|A4FPM6.1|RS10_SACEN RecName: Full=30S ribosomal protein S10
gi|133915888|emb|CAM06001.1| 30S ribosomal protein S10 [Saccharopolyspora erythraea NRRL 2338]
Length=101
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/101 (96%), Positives = 99/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETV RTGA VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVTRTGARVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI++PTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILEPTPKTVDALMRIDLPASVDVNIQ 101
>gi|23492357|dbj|BAC17331.1| putative 30S ribosomal protein S10 [Corynebacterium efficiens
YS-314]
Length=137
Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/101 (97%), Positives = 98/101 (98%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
VAGQKIRIRLKAYDHEAIDASARKIVETV RTGA VVGPVPLPTEKNVY VIRSPHKYKD
Sbjct 37 VAGQKIRIRLKAYDHEAIDASARKIVETVTRTGARVVGPVPLPTEKNVYAVIRSPHKYKD 96
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 97 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 137
>gi|300782607|ref|YP_003762898.1| 30S ribosomal protein S10 [Amycolatopsis mediterranei U32]
gi|302523992|ref|ZP_07276334.1| ribosomal protein S10 [Streptomyces sp. AA4]
gi|299792121|gb|ADJ42496.1| small subunit ribosomal protein S10 [Amycolatopsis mediterranei
U32]
gi|302432887|gb|EFL04703.1| ribosomal protein S10 [Streptomyces sp. AA4]
gi|340523978|gb|AEK39183.1| 30S ribosomal protein S10 [Amycolatopsis mediterranei S699]
Length=101
Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/101 (96%), Positives = 98/101 (98%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAID SARKIVETV RTGA VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDTSARKIVETVTRTGARVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|41324734|emb|CAF19216.1| RIBOSOMAL PROTEIN S10 [Corynebacterium glutamicum ATCC 13032]
Length=110
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/101 (97%), Positives = 98/101 (98%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
VAGQKIRIRLKAYDHEAIDASARKIVETV RTGA VVGPVPLPTEKNVY VIRSPHKYKD
Sbjct 10 VAGQKIRIRLKAYDHEAIDASARKIVETVTRTGARVVGPVPLPTEKNVYAVIRSPHKYKD 69
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 70 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 110
>gi|259506794|ref|ZP_05749694.1| 30S ribosomal protein S10 [Corynebacterium efficiens YS-314]
gi|259165665|gb|EEW50219.1| 30S ribosomal protein S10 [Corynebacterium efficiens YS-314]
Length=113
Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/101 (97%), Positives = 98/101 (98%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
VAGQKIRIRLKAYDHEAIDASARKIVETV RTGA VVGPVPLPTEKNVY VIRSPHKYKD
Sbjct 13 VAGQKIRIRLKAYDHEAIDASARKIVETVTRTGARVVGPVPLPTEKNVYAVIRSPHKYKD 72
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 73 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 113
>gi|284992875|ref|YP_003411429.1| 30S ribosomal protein S10 [Geodermatophilus obscurus DSM 43160]
gi|284066120|gb|ADB77058.1| ribosomal protein S10 [Geodermatophilus obscurus DSM 43160]
Length=101
Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/101 (95%), Positives = 99/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASAR+IVETV +TGA VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARRIVETVTKTGARVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|227487124|ref|ZP_03917440.1| 30S ribosomal protein S10 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541709|ref|ZP_03971758.1| 30S ribosomal protein S10 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092782|gb|EEI28094.1| 30S ribosomal protein S10 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182524|gb|EEI63496.1| 30S ribosomal protein S10 [Corynebacterium glucuronolyticum ATCC
51866]
Length=142
Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/101 (94%), Positives = 99/101 (99%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
VAGQKIRIRLKAYDHEAIDASA+KIVETV RTGA +VGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 42 VAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARIVGPVPLPTEKNVYCVIRSPHKYKD 101
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKR+I+I+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 102 SREHFEMRTHKRMIEILDPTPKTVDALMRIDLPASVDVNIQ 142
>gi|19551745|ref|NP_599747.1| 30S ribosomal protein S10 [Corynebacterium glutamicum ATCC 13032]
gi|145294655|ref|YP_001137476.1| 30S ribosomal protein S10 [Corynebacterium glutamicum R]
gi|161485995|ref|NP_737131.2| 30S ribosomal protein S10 [Corynebacterium efficiens YS-314]
16 more sequence titles
Length=101
Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/101 (96%), Positives = 98/101 (98%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASARKIVETV RTGA VVGPVPLPTEKNVY VIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASARKIVETVTRTGARVVGPVPLPTEKNVYAVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|38233084|ref|NP_938851.1| 30S ribosomal protein S10 [Corynebacterium diphtheriae NCTC 13129]
gi|227502653|ref|ZP_03932702.1| 30S ribosomal protein S10 [Corynebacterium accolens ATCC 49725]
gi|227549825|ref|ZP_03979874.1| 30S ribosomal protein S10 [Corynebacterium lipophiloflavum DSM
44291]
14 more sequence titles
Length=101
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/101 (95%), Positives = 98/101 (98%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASA+KIVETV RTGA VVGPVPLPTEKNVY VIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTEKNVYAVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|306835218|ref|ZP_07468252.1| 30S ribosomal protein S10 [Corynebacterium accolens ATCC 49726]
gi|304568898|gb|EFM44429.1| 30S ribosomal protein S10 [Corynebacterium accolens ATCC 49726]
Length=101
Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/101 (95%), Positives = 98/101 (98%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASA+KIVETV RTGA VVGPVPLPTEKNVY VIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTEKNVYVVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|172039994|ref|YP_001799708.1| 30S ribosomal protein S10 [Corynebacterium urealyticum DSM 7109]
gi|260579268|ref|ZP_05847152.1| 30S ribosomal protein S10 [Corynebacterium jeikeium ATCC 43734]
gi|226705429|sp|B1VET5.1|RS10_CORU7 RecName: Full=30S ribosomal protein S10
gi|171851298|emb|CAQ04274.1| 30S ribosomal protein S10 [Corynebacterium urealyticum DSM 7109]
gi|258602620|gb|EEW15913.1| 30S ribosomal protein S10 [Corynebacterium jeikeium ATCC 43734]
Length=101
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/101 (95%), Positives = 98/101 (98%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASA+KIVETV RTGA VVGPVPLPTEKNVYCVIRSPHK KD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTEKNVYCVIRSPHKDKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|225020385|ref|ZP_03709577.1| hypothetical protein CORMATOL_00392 [Corynebacterium matruchotii
ATCC 33806]
gi|224946774|gb|EEG27983.1| hypothetical protein CORMATOL_00392 [Corynebacterium matruchotii
ATCC 33806]
Length=110
Score = 193 bits (491), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/100 (95%), Positives = 96/100 (96%), Gaps = 0/100 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
VAGQKIRIRLKAYDHEAID SARKIVETV RTGA VVGPVPLPTEKNVY VIRSPHKYKD
Sbjct 10 VAGQKIRIRLKAYDHEAIDVSARKIVETVTRTGARVVGPVPLPTEKNVYAVIRSPHKYKD 69
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNI 100
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNI
Sbjct 70 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNI 109
>gi|227505217|ref|ZP_03935266.1| 30S ribosomal protein S10 [Corynebacterium striatum ATCC 6940]
gi|227198191|gb|EEI78239.1| 30S ribosomal protein S10 [Corynebacterium striatum ATCC 6940]
Length=101
Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/101 (94%), Positives = 97/101 (97%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASA+KIVETV RTGA VVGPVPLPTEKNVY VI SPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTEKNVYAVICSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|300779846|ref|ZP_07089702.1| 30S ribosomal protein S10 [Corynebacterium genitalium ATCC 33030]
gi|300533956|gb|EFK55015.1| 30S ribosomal protein S10 [Corynebacterium genitalium ATCC 33030]
Length=101
Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/101 (94%), Positives = 97/101 (97%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHEAIDASA+KIVETV RTGA VVGPVPLPTEKNVY VIRSPHK KD
Sbjct 1 MAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTEKNVYAVIRSPHKDKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVDALMRIDLPASVDVNIQ
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ 101
>gi|297564036|ref|YP_003683009.1| ribosomal protein S10 [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296848485|gb|ADH70503.1| ribosomal protein S10 [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length=102
Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/101 (89%), Positives = 95/101 (95%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SARKIVETV RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSARKIVETVTRTGAQVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|152964656|ref|YP_001360440.1| 30S ribosomal protein S10 [Kineococcus radiotolerans SRS30216]
gi|189040376|sp|A6W5T7.1|RS10_KINRD RecName: Full=30S ribosomal protein S10
gi|151359173|gb|ABS02176.1| ribosomal protein S10 [Kineococcus radiotolerans SRS30216]
Length=102
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/101 (89%), Positives = 96/101 (96%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SARKIV+TV RTGASV GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSARKIVDTVTRTGASVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|271962631|ref|YP_003336827.1| 30S ribosomal protein S10 [Streptosporangium roseum DSM 43021]
gi|270505806|gb|ACZ84084.1| 30S ribosomal protein S10 [Streptosporangium roseum DSM 43021]
Length=102
Score = 187 bits (475), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/101 (88%), Positives = 96/101 (96%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SA+KIVETV RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSAKKIVETVTRTGAKVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD++I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDISIK 101
>gi|256390139|ref|YP_003111703.1| 30S ribosomal protein S10 [Catenulispora acidiphila DSM 44928]
gi|256356365|gb|ACU69862.1| ribosomal protein S10 [Catenulispora acidiphila DSM 44928]
gi|311896571|dbj|BAJ28979.1| putative ribosomal protein S10 [Kitasatospora setae KM-6054]
Length=102
Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/101 (87%), Positives = 96/101 (96%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SA+KIVETV+RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSAKKIVETVIRTGAQVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|21223081|ref|NP_628860.1| 30S ribosomal protein S10 [Streptomyces coelicolor A3(2)]
gi|29831468|ref|NP_826102.1| 30S ribosomal protein S10 [Streptomyces avermitilis MA-4680]
gi|182436628|ref|YP_001824347.1| 30S ribosomal protein S10 [Streptomyces griseus subsp. griseus
NBRC 13350]
55 more sequence titles
Length=102
Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 87/101 (87%), Positives = 96/101 (96%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SA+KIVETV RTGASV GPVPLPTEKNVYCVI+SPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSAKKIVETVTRTGASVAGPVPLPTEKNVYCVIKSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|269128517|ref|YP_003301887.1| 30S ribosomal protein S10 [Thermomonospora curvata DSM 43183]
gi|268313475|gb|ACY99849.1| ribosomal protein S10 [Thermomonospora curvata DSM 43183]
Length=102
Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/101 (88%), Positives = 95/101 (95%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SA+KIVETV RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSAKKIVETVTRTGAKVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|72163046|ref|YP_290703.1| 30S ribosomal protein S10 [Thermobifida fusca YX]
gi|118597335|sp|Q47LJ2.1|RS10_THEFY RecName: Full=30S ribosomal protein S10
gi|71916778|gb|AAZ56680.1| SSU ribosomal protein S10P [Thermobifida fusca YX]
Length=102
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/101 (88%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID SAR+IVETV RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDKSARRIVETVTRTGAQVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|336116747|ref|YP_004571514.1| 30S ribosomal protein S10 [Microlunatus phosphovorus NM-1]
gi|334684526|dbj|BAK34111.1| 30S ribosomal protein S10 [Microlunatus phosphovorus NM-1]
Length=102
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/101 (88%), Positives = 95/101 (95%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SARKIV+TV RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSARKIVDTVTRTGARVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|119718126|ref|YP_925091.1| 30S ribosomal protein S10 [Nocardioides sp. JS614]
gi|326332190|ref|ZP_08198470.1| ribosomal protein S10 [Nocardioidaceae bacterium Broad-1]
gi|166231302|sp|A1SNL9.1|RS10_NOCSJ RecName: Full=30S ribosomal protein S10
gi|119538787|gb|ABL83404.1| SSU ribosomal protein S10P [Nocardioides sp. JS614]
gi|325949896|gb|EGD41956.1| ribosomal protein S10 [Nocardioidaceae bacterium Broad-1]
Length=102
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/101 (88%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID SARKIV+TV RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDTSARKIVDTVTRTGAKVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|345008569|ref|YP_004810923.1| 30S ribosomal protein S10 [Streptomyces violaceusniger Tu 4113]
gi|344034918|gb|AEM80643.1| 30S ribosomal protein S10 [Streptomyces violaceusniger Tu 4113]
Length=102
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/101 (86%), Positives = 96/101 (96%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SA+KIVETV RTGASV GPVPLPTEKNVYCVI+SPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSAKKIVETVTRTGASVAGPVPLPTEKNVYCVIKSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
+REHFEMRTHKRLIDI+DPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 AREHFEMRTHKRLIDILDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|337767576|emb|CCB76287.1| ribosomal protein S10 (BS13) [Streptomyces cattleya NRRL 8057]
Length=102
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/101 (86%), Positives = 95/101 (95%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SA+KIVETV RTGA V GPVPLPTEKNVYCVI+SPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSAKKIVETVTRTGAQVAGPVPLPTEKNVYCVIKSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|158317792|ref|YP_001510300.1| 30S ribosomal protein S10 [Frankia sp. EAN1pec]
gi|288917229|ref|ZP_06411598.1| ribosomal protein S10 [Frankia sp. EUN1f]
gi|226705448|sp|A8LC57.1|RS10_FRASN RecName: Full=30S ribosomal protein S10
gi|158113197|gb|ABW15394.1| ribosomal protein S10 [Frankia sp. EAN1pec]
gi|288351420|gb|EFC85628.1| ribosomal protein S10 [Frankia sp. EUN1f]
Length=102
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/101 (87%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+A QKIRIRLKAYDHE ID+SARKIVETV RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAAQKIRIRLKAYDHEVIDSSARKIVETVTRTGAQVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|284034003|ref|YP_003383934.1| 30S ribosomal protein S10 [Kribbella flavida DSM 17836]
gi|283813296|gb|ADB35135.1| ribosomal protein S10 [Kribbella flavida DSM 17836]
Length=102
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/101 (87%), Positives = 95/101 (95%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SARKIV+TV RTGA V GPVPLPTEKNV+CVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSARKIVDTVTRTGAKVAGPVPLPTEKNVFCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|336179783|ref|YP_004585158.1| 30S ribosomal protein S10 [Frankia symbiont of Datisca glomerata]
gi|334860763|gb|AEH11237.1| 30S ribosomal protein S10 [Frankia symbiont of Datisca glomerata]
Length=102
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/101 (87%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+A QKIRIRLKAYDHE ID+SARKIVETV RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAAQKIRIRLKAYDHEIIDSSARKIVETVTRTGAQVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|86739294|ref|YP_479694.1| 30S ribosomal protein S10 [Frankia sp. CcI3]
gi|111220545|ref|YP_711339.1| 30S ribosomal protein S10 [Frankia alni ACN14a]
gi|312200021|ref|YP_004020082.1| ribosomal protein S10 [Frankia sp. EuI1c]
gi|108884795|sp|Q2JFH7.1|RS10_FRASC RecName: Full=30S ribosomal protein S10
gi|123339022|sp|Q0RRS2.1|RS10_FRAAA RecName: Full=30S ribosomal protein S10
gi|86566156|gb|ABD09965.1| SSU ribosomal protein S10P [Frankia sp. CcI3]
gi|111148077|emb|CAJ59745.1| 30S ribosomal subunit protein S10 [Frankia alni ACN14a]
gi|311231357|gb|ADP84212.1| ribosomal protein S10 [Frankia sp. EuI1c]
Length=102
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/101 (86%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+A QKIRIRLKAYDHE ID+SARKIVETV RTGA V GPVPLPTEKN+YCVIRSPHKYKD
Sbjct 1 MAAQKIRIRLKAYDHEVIDSSARKIVETVTRTGAQVAGPVPLPTEKNIYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDILDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|311744810|ref|ZP_07718606.1| 30S ribosomal protein S10 [Aeromicrobium marinum DSM 15272]
gi|311311927|gb|EFQ81848.1| 30S ribosomal protein S10 [Aeromicrobium marinum DSM 15272]
Length=102
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/101 (87%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID SARKIV+TV RTGA V GPVPLPTEKNV+CVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDTSARKIVDTVTRTGAKVAGPVPLPTEKNVFCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDIEIK 101
>gi|163840907|ref|YP_001625312.1| SSU ribosomal protein S10P [Renibacterium salmoninarum ATCC 33209]
gi|162954383|gb|ABY23898.1| SSU ribosomal protein S10P [Renibacterium salmoninarum ATCC 33209]
Length=124
Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/101 (86%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLK+YDHE ID SARKIVETV R GA+VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 23 MAGQKIRIRLKSYDHEVIDVSARKIVETVTRAGATVVGPVPLPTEKNVYCVIRSPHKYKD 82
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPK VD+LMR+DLPA V++ I+
Sbjct 83 SREHFEMRTHKRLIDIIDPTPKAVDSLMRLDLPADVNIEIK 123
>gi|296268549|ref|YP_003651181.1| 30S ribosomal protein S10 [Thermobispora bispora DSM 43833]
gi|296091336|gb|ADG87288.1| ribosomal protein S10 [Thermobispora bispora DSM 43833]
Length=102
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/101 (87%), Positives = 95/101 (95%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SA+KIVETV RTGA V GPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSAKKIVETVTRTGAKVAGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHF MRTHKRLIDIIDPTPKTVD+LMR+DLPA VD++I+
Sbjct 61 SREHFVMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDISIK 101
>gi|116671522|ref|YP_832455.1| 30S ribosomal protein S10 [Arthrobacter sp. FB24]
gi|119961625|ref|YP_948658.1| 30S ribosomal protein S10 [Arthrobacter aurescens TC1]
gi|184200261|ref|YP_001854468.1| 30S ribosomal protein S10 [Kocuria rhizophila DC2201]
11 more sequence titles
Length=102
Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/101 (86%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLK+YDHE ID SARKIVETV R GA+VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKSYDHEVIDVSARKIVETVTRAGATVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPK VD+LMR+DLPA V++ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKAVDSLMRLDLPADVNIEIK 101
>gi|117927514|ref|YP_872065.1| 30S ribosomal protein S10 [Acidothermus cellulolyticus 11B]
gi|166231231|sp|A0LRL9.1|RS10_ACIC1 RecName: Full=30S ribosomal protein S10
gi|117647977|gb|ABK52079.1| SSU ribosomal protein S10P [Acidothermus cellulolyticus 11B]
Length=102
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/101 (87%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SARKIVETV RTGA V GPVPLPTEKNVYCVIRSPHK KD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSARKIVETVTRTGARVAGPVPLPTEKNVYCVIRSPHKDKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTP+TVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPRTVDSLMRLDLPAGVDIEIK 101
>gi|308178137|ref|YP_003917543.1| 30S ribosomal protein S10 [Arthrobacter arilaitensis Re117]
gi|307745600|emb|CBT76572.1| 30S ribosomal protein S10 [Arthrobacter arilaitensis Re117]
Length=102
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/101 (85%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLK+YDHE ID SARKIVETV R GA+VVGPVPLPTEKNVYCVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKSYDHEVIDVSARKIVETVTRAGATVVGPVPLPTEKNVYCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI+DPTPK VD+LMR+DLPA V++ I+
Sbjct 61 SREHFEMRTHKRLIDIVDPTPKAVDSLMRLDLPADVNIEIK 101
>gi|296130496|ref|YP_003637746.1| ribosomal protein S10 [Cellulomonas flavigena DSM 20109]
gi|332669516|ref|YP_004452524.1| 50S ribosomal protein S10 [Cellulomonas fimi ATCC 484]
gi|336319934|ref|YP_004599902.1| 30S ribosomal protein S10 [Cellvibrio gilvus ATCC 13127]
gi|296022311|gb|ADG75547.1| ribosomal protein S10 [Cellulomonas flavigena DSM 20109]
gi|332338554|gb|AEE45137.1| ribosomal protein S10 [Cellulomonas fimi ATCC 484]
gi|336103515|gb|AEI11334.1| ribosomal protein S10 [Cellvibrio gilvus ATCC 13127]
Length=102
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/101 (85%), Positives = 95/101 (95%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLK+YDHE ID+SARKIV+TV R GASVVGPVPLPTEKNV+CVIRSPHKYKD
Sbjct 1 MAGQKIRIRLKSYDHEVIDSSARKIVDTVTRAGASVVGPVPLPTEKNVFCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPK VD+LMR+DLPA V++ I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKAVDSLMRLDLPADVNIEIK 101
>gi|2500434|sp|P72232.1|RS10_PLARO RecName: Full=30S ribosomal protein S10
gi|1679860|emb|CAA67346.1| ribosomal protein S10 [Planobispora rosea]
Length=102
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/101 (86%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRLKAYDHE ID+SA+KIVETV RTGA V GPVPLPTEKNVYCVIRSPH KD
Sbjct 1 MAGQKIRIRLKAYDHEVIDSSAKKIVETVTRTGAKVAGPVPLPTEKNVYCVIRSPHNDKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDIIDPTPKTVD+LMR+DLPA VD++I+
Sbjct 61 SREHFEMRTHKRLIDIIDPTPKTVDSLMRLDLPAGVDISIK 101
>gi|50843319|ref|YP_056546.1| 30S ribosomal protein S10 [Propionibacterium acnes KPA171202]
gi|282855209|ref|ZP_06264541.1| ribosomal protein S10 [Propionibacterium acnes J139]
gi|289424814|ref|ZP_06426596.1| ribosomal protein S10 [Propionibacterium acnes SK187]
69 more sequence titles
Length=103
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/101 (84%), Positives = 95/101 (95%), Gaps = 0/101 (0%)
Query 1 VAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKD 60
+AGQKIRIRL+AYDHE ID+SARKIV+TV RTGA V GPVPLPTEKNV+CVIRSPHKYKD
Sbjct 1 MAGQKIRIRLRAYDHEVIDSSARKIVDTVTRTGAKVAGPVPLPTEKNVFCVIRSPHKYKD 60
Query 61 SREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ 101
SREHFEMRTHKRLIDI++PTPKTVD+LMR+DLPA VD+ I+
Sbjct 61 SREHFEMRTHKRLIDILEPTPKTVDSLMRLDLPAGVDIEIK 101
Lambda K H
0.320 0.136 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128767090968
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40