BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0701
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
gi|308376477|ref|ZP_07438983.2| 50S ribosomal protein L3 rplC [M... 437 4e-121
gi|15607841|ref|NP_215215.1| 50S ribosomal protein L3 [Mycobacte... 437 5e-121
gi|2113866|emb|CAA73672.1| rplC [Mycobacterium bovis BCG] 436 1e-120
gi|240167703|ref|ZP_04746362.1| 50S ribosomal protein L3 [Mycoba... 420 8e-116
gi|183981053|ref|YP_001849344.1| 50S ribosomal protein L3 RplC [... 419 2e-115
gi|41410259|ref|NP_963095.1| 50S ribosomal protein L3 [Mycobacte... 417 6e-115
gi|296168557|ref|ZP_06850361.1| 50S ribosomal protein L3 [Mycoba... 416 9e-115
gi|254822787|ref|ZP_05227788.1| 50S ribosomal protein L3 [Mycoba... 415 3e-114
gi|118616571|ref|YP_904903.1| 50S ribosomal protein L3 [Mycobact... 414 4e-114
gi|13432203|sp|P30762.3|RL3_MYCLE RecName: Full=50S ribosomal pr... 411 3e-113
gi|15828002|ref|NP_302265.1| 50S ribosomal protein L3 [Mycobacte... 411 3e-113
gi|342861791|ref|ZP_08718436.1| 50S ribosomal protein L3 [Mycoba... 409 2e-112
gi|2344833|emb|CAB11435.1| ribosomal protein L3 [Mycobacterium l... 408 3e-112
gi|120402316|ref|YP_952145.1| 50S ribosomal protein L3 [Mycobact... 405 3e-111
gi|108797986|ref|YP_638183.1| 50S ribosomal protein L3 [Mycobact... 398 2e-109
gi|118473190|ref|YP_885819.1| 50S ribosomal protein L3 [Mycobact... 391 4e-107
gi|145225625|ref|YP_001136303.1| 50S ribosomal protein L3 [Mycob... 391 5e-107
gi|333991978|ref|YP_004524592.1| 50S ribosomal protein L3 RplC [... 378 2e-103
gi|169630900|ref|YP_001704549.1| 50S ribosomal protein L3 [Mycob... 370 5e-101
gi|226305341|ref|YP_002765299.1| 50S ribosomal protein L3 [Rhodo... 351 5e-95
gi|111023096|ref|YP_706068.1| 50S ribosomal protein L3 [Rhodococ... 351 5e-95
gi|312140918|ref|YP_004008254.1| 50S ribosomal protein l3 rplc [... 350 1e-94
gi|54022700|ref|YP_116942.1| 50S ribosomal protein L3 [Nocardia ... 344 6e-93
gi|262203624|ref|YP_003274832.1| 50S ribosomal protein L3 [Gordo... 335 3e-90
gi|343927783|ref|ZP_08767251.1| 50S ribosomal protein L3 [Gordon... 333 1e-89
gi|319948723|ref|ZP_08022844.1| 50S ribosomal protein L3 [Dietzi... 332 3e-89
gi|134103264|ref|YP_001108925.1| 50S ribosomal protein L3 [Sacch... 325 3e-87
gi|296141115|ref|YP_003648358.1| 50S ribosomal protein L3 [Tsuka... 323 1e-86
gi|300782608|ref|YP_003762899.1| 50S ribosomal protein L3 [Amyco... 322 2e-86
gi|326385099|ref|ZP_08206769.1| 50S ribosomal protein L3 [Gordon... 322 3e-86
gi|317507409|ref|ZP_07965143.1| 50S ribosomal protein L3 [Segnil... 320 7e-86
gi|302523993|ref|ZP_07276335.1| 50S ribosomal protein L3 [Strept... 319 2e-85
gi|296392585|ref|YP_003657469.1| 50S ribosomal protein L3 [Segni... 316 1e-84
gi|257054470|ref|YP_003132302.1| 50S ribosomal protein L3P [Sacc... 315 3e-84
gi|333918147|ref|YP_004491728.1| 50S ribosomal protein L3 [Amyco... 312 2e-83
gi|328884426|emb|CCA57665.1| LSU ribosomal protein L3p [Streptom... 305 2e-81
gi|237786395|ref|YP_002907100.1| 50S ribosomal protein L3 [Coryn... 304 5e-81
gi|227505216|ref|ZP_03935265.1| 50S ribosomal protein L3 [Coryne... 302 2e-80
gi|302558994|ref|ZP_07311336.1| 50S ribosomal protein L3 [Strept... 301 3e-80
gi|297201729|ref|ZP_06919126.1| 50S ribosomal protein L3 [Strept... 301 5e-80
gi|297159597|gb|ADI09309.1| 50S ribosomal protein L3 [Streptomyc... 300 7e-80
gi|256380598|ref|YP_003104258.1| 50S ribosomal protein L3 [Actin... 300 8e-80
gi|302536251|ref|ZP_07288593.1| 50S ribosomal protein L3 [Strept... 300 9e-80
gi|29831469|ref|NP_826103.1| 50S ribosomal protein L3 [Streptomy... 300 9e-80
gi|296268550|ref|YP_003651182.1| 50S ribosomal protein L3 [Therm... 300 1e-79
gi|302553542|ref|ZP_07305884.1| 50S ribosomal protein L3 [Strept... 300 1e-79
gi|182436627|ref|YP_001824346.1| 50S ribosomal protein L3 [Strep... 300 1e-79
gi|290958151|ref|YP_003489333.1| 50S ribosomal protein L3 [Strep... 300 1e-79
gi|21223082|ref|NP_628861.1| 50S ribosomal protein L3 [Streptomy... 300 1e-79
gi|329938232|ref|ZP_08287683.1| 50S ribosomal protein L3 [Strept... 299 2e-79
>gi|308376477|ref|ZP_07438983.2| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008]
gi|308350981|gb|EFP39832.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008]
Length=221
Score = 437 bits (1125), Expect = 4e-121, Method: Compositional matrix adjust.
Identities = 217/217 (100%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR
Sbjct 5 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 64
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG
Sbjct 65 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 124
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL
Sbjct 125 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 184
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK
Sbjct 185 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 221
>gi|15607841|ref|NP_215215.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Rv]
gi|15840108|ref|NP_335145.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CDC1551]
gi|31791886|ref|NP_854379.1| 50S ribosomal protein L3 [Mycobacterium bovis AF2122/97]
83 more sequence titles
Length=217
Score = 437 bits (1124), Expect = 5e-121, Method: Compositional matrix adjust.
Identities = 217/217 (100%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG
Sbjct 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL
Sbjct 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK
Sbjct 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
>gi|2113866|emb|CAA73672.1| rplC [Mycobacterium bovis BCG]
Length=217
Score = 436 bits (1120), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 216/217 (99%), Positives = 216/217 (99%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDESNRV PVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDESNRVAPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG
Sbjct 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL
Sbjct 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK
Sbjct 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
>gi|240167703|ref|ZP_04746362.1| 50S ribosomal protein L3 [Mycobacterium kansasii ATCC 12478]
Length=217
Score = 420 bits (1079), Expect = 8e-116, Method: Compositional matrix adjust.
Identities = 208/217 (96%), Positives = 212/217 (98%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KV KPLTGQYTAAGVNPRR+LAELRLDD DA EY+VGQELTAEIFADGSYVDVTGTSKG
Sbjct 61 KVTKPLTGQYTAAGVNPRRHLAELRLDDPDAVAEYEVGQELTAEIFADGSYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGA+HGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTV NL
Sbjct 121 KGFAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK
Sbjct 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
>gi|183981053|ref|YP_001849344.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M]
gi|226730539|sp|B2HSN1.1|RL3_MYCMM RecName: Full=50S ribosomal protein L3
gi|183174379|gb|ACC39489.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M]
Length=217
Score = 419 bits (1076), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 206/217 (95%), Positives = 213/217 (99%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+N+VVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQYTAAGVNPRR+LAELRLDD++A TEY+VGQELTAEIFADGSYVDVTGTSKG
Sbjct 61 KVNKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGF GQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTV NL
Sbjct 121 KGFAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVDAE GVLLIKGAVPGRTGGLVMVRSAIKRGEK
Sbjct 181 LVHKVDAEQGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
>gi|41410259|ref|NP_963095.1| 50S ribosomal protein L3 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463063|ref|YP_883606.1| 50S ribosomal protein L3 [Mycobacterium avium 104]
gi|254776907|ref|ZP_05218423.1| 50S ribosomal protein L3 [Mycobacterium avium subsp. avium ATCC
25291]
gi|81831570|sp|Q73SB3.1|RL3_MYCPA RecName: Full=50S ribosomal protein L3
gi|166233161|sp|A0QL18.1|RL3_MYCA1 RecName: Full=50S ribosomal protein L3
gi|41399093|gb|AAS06711.1| RplC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118164350|gb|ABK65247.1| ribosomal protein L3 [Mycobacterium avium 104]
gi|336460668|gb|EGO39559.1| 50S ribosomal protein L3, bacterial [Mycobacterium avium subsp.
paratuberculosis S397]
Length=217
Score = 417 bits (1072), Expect = 6e-115, Method: Compositional matrix adjust.
Identities = 204/217 (95%), Positives = 211/217 (98%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVTRIRTPE+DGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQY AAG+NPRR+LAELRLD+ DAA EYQVGQELTAEIF DGSYVDVTGTSKG
Sbjct 61 KVNKPVTGQYAAAGINPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTV NL
Sbjct 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVD ENGVLLIKGAVPGRTGGLVMVRSA+KRGEK
Sbjct 181 LVHKVDTENGVLLIKGAVPGRTGGLVMVRSAVKRGEK 217
>gi|296168557|ref|ZP_06850361.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896620|gb|EFG76259.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=217
Score = 416 bits (1070), Expect = 9e-115, Method: Compositional matrix adjust.
Identities = 205/217 (95%), Positives = 212/217 (98%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+NR+VPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQY+AAGVNPRR+LAELRLDD AA EY+VGQELTAEIFADGSYVDVTGTSKG
Sbjct 61 KVNKPVTGQYSAAGVNPRRHLAELRLDDEAAAGEYEVGQELTAEIFADGSYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTV NL
Sbjct 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
+VHKVD ENGVLLIKGAVPGRTGGLVMVRSAIKRGEK
Sbjct 181 VVHKVDTENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
>gi|254822787|ref|ZP_05227788.1| 50S ribosomal protein L3 [Mycobacterium intracellulare ATCC 13950]
Length=217
Score = 415 bits (1066), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 203/217 (94%), Positives = 211/217 (98%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+NR+VPVTVVKAGPNVVTRIRTPE+DGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQY AAGVNPRR+LAELRLD+ DAA EYQVGQELTAEIF DGSYVDVTGTSKG
Sbjct 61 KVNKPVTGQYAAAGVNPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTV NL
Sbjct 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVD ENGVLLIKGAVPGRTGGLV+VRSA+KRGEK
Sbjct 181 LVHKVDTENGVLLIKGAVPGRTGGLVVVRSAVKRGEK 217
>gi|118616571|ref|YP_904903.1| 50S ribosomal protein L3 [Mycobacterium ulcerans Agy99]
gi|166233167|sp|A0PM63.1|RL3_MYCUA RecName: Full=50S ribosomal protein L3
gi|118568681|gb|ABL03432.1| 50S ribosomal protein L3 RplC [Mycobacterium ulcerans Agy99]
Length=217
Score = 414 bits (1064), Expect = 4e-114, Method: Compositional matrix adjust.
Identities = 204/217 (95%), Positives = 211/217 (98%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+N+VVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQYTAAGVNPRR+LAELRLDD++A TEY+VGQELTAEIFADGSYVDVTGTSKG
Sbjct 61 KVNKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGF GQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTV NL
Sbjct 121 KGFAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVDAE VLLIKGAVPGRTGGLV VRSAIKRGEK
Sbjct 181 LVHKVDAEQSVLLIKGAVPGRTGGLVTVRSAIKRGEK 217
>gi|13432203|sp|P30762.3|RL3_MYCLE RecName: Full=50S ribosomal protein L3
Length=217
Score = 411 bits (1057), Expect = 3e-113, Method: Compositional matrix adjust.
Identities = 203/217 (94%), Positives = 209/217 (97%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVTRIRT ERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQY +AGVNPRRYLAELRLD DAA EY+VGQELTAEIFAD +YVDVTGTSKG
Sbjct 61 KVNKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGF+GTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTV NL
Sbjct 121 KGFSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVD ENGVLLIKGAVPGRTGGLVMVRSAIKRGEK
Sbjct 181 LVHKVDTENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
>gi|15828002|ref|NP_302265.1| 50S ribosomal protein L3 [Mycobacterium leprae TN]
gi|221230479|ref|YP_002503895.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923]
gi|13093555|emb|CAC30817.1| 50S ribosomal protein L3 [Mycobacterium leprae]
gi|219933586|emb|CAR71959.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923]
Length=218
Score = 411 bits (1057), Expect = 3e-113, Method: Compositional matrix adjust.
Identities = 203/217 (94%), Positives = 209/217 (97%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVTRIRT ERDGYSAVQLAYGEISPR
Sbjct 2 MARKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPR 61
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQY +AGVNPRRYLAELRLD DAA EY+VGQELTAEIFAD +YVDVTGTSKG
Sbjct 62 KVNKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKG 121
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGF+GTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTV NL
Sbjct 122 KGFSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 181
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVD ENGVLLIKGAVPGRTGGLVMVRSAIKRGEK
Sbjct 182 LVHKVDTENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 218
>gi|342861791|ref|ZP_08718436.1| 50S ribosomal protein L3 [Mycobacterium colombiense CECT 3035]
gi|342130608|gb|EGT83912.1| 50S ribosomal protein L3 [Mycobacterium colombiense CECT 3035]
Length=217
Score = 409 bits (1050), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 199/217 (92%), Positives = 212/217 (98%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVTRIRTPE+DGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQY AAGVNPRR+LAELRL++ +AA EY+VGQELTAEIFADG+YVDVTGTSKG
Sbjct 61 KVNKPVTGQYAAAGVNPRRFLAELRLENPEAAAEYEVGQELTAEIFADGAYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRM+GRMG+DRVTV NL
Sbjct 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMSGRMGSDRVTVQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVD ENGVLLIKGAVPGRTGGLV+VRSA+KRGEK
Sbjct 181 LVHKVDTENGVLLIKGAVPGRTGGLVVVRSAVKRGEK 217
>gi|2344833|emb|CAB11435.1| ribosomal protein L3 [Mycobacterium leprae]
Length=217
Score = 408 bits (1048), Expect = 3e-112, Method: Compositional matrix adjust.
Identities = 202/217 (94%), Positives = 208/217 (96%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVTRIRT E DGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLEPDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQY +AGVNPRRYLAELRLD DAA EY+VGQELTAEIFAD +YVDVTGTSKG
Sbjct 61 KVNKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGF+GTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTV NL
Sbjct 121 KGFSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
LVHKVD ENGVLLIKGAVPGRTGGLVMVRSAIKRGEK
Sbjct 181 LVHKVDTENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
>gi|120402316|ref|YP_952145.1| 50S ribosomal protein L3 [Mycobacterium vanbaalenii PYR-1]
gi|166233168|sp|A1T4N9.1|RL3_MYCVP RecName: Full=50S ribosomal protein L3
gi|119955134|gb|ABM12139.1| LSU ribosomal protein L3P [Mycobacterium vanbaalenii PYR-1]
Length=218
Score = 405 bits (1040), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 198/217 (92%), Positives = 208/217 (96%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+N+VVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQY AAGVNPRR+LAELRLDD AA EY+VGQELTAEIFADG+YVDVTGTSKG
Sbjct 61 KVNKPVTGQYAAAGVNPRRHLAELRLDDEAAAAEYEVGQELTAEIFADGAYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATP RVFKGTRM+GRMG+DRVT NL
Sbjct 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
VHKVDAENGVLLIKGA+PGR GGLV+VRSAIKRGEK
Sbjct 181 KVHKVDAENGVLLIKGAIPGRNGGLVVVRSAIKRGEK 217
>gi|108797986|ref|YP_638183.1| 50S ribosomal protein L3 [Mycobacterium sp. MCS]
gi|119867082|ref|YP_937034.1| 50S ribosomal protein L3 [Mycobacterium sp. KMS]
gi|126433648|ref|YP_001069339.1| 50S ribosomal protein L3 [Mycobacterium sp. JLS]
6 more sequence titles
Length=217
Score = 398 bits (1023), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 191/217 (89%), Positives = 208/217 (96%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+N+VVPVTVVKAGPNVVTRIRTPERDGYSAVQ+AYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQIAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KVNKP+TGQ+ AAGVNPRR+LAELRLDD AA +Y+VGQELTAE+F+DG+YVDVTGTSKG
Sbjct 61 KVNKPVTGQFAAAGVNPRRHLAELRLDDESAAADYEVGQELTAEVFSDGAYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGF+GQGA+HGAQAVHRRPGSIGGCATP RVFKGTRM+GRMG+DRVT NL
Sbjct 121 KGFAGTMKRHGFKGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
+VHKVDA NGVLLIKGA+PGR GGLVMVRSAIKRGEK
Sbjct 181 VVHKVDAANGVLLIKGAIPGRNGGLVMVRSAIKRGEK 217
>gi|118473190|ref|YP_885819.1| 50S ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155]
gi|166233163|sp|A0QSD1.1|RL3_MYCS2 RecName: Full=50S ribosomal protein L3
gi|118174477|gb|ABK75373.1| ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155]
Length=217
Score = 391 bits (1004), Expect = 4e-107, Method: Compositional matrix adjust.
Identities = 191/217 (89%), Positives = 204/217 (95%), Gaps = 0/217 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+N+VVPVTVVKAGPNVVTRIRT ERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKG 120
KV KP+ GQ+ AAGVNPRR++AELRLDD A EY+VGQELTAEIF+DG+YVDVTGTSKG
Sbjct 61 KVIKPVAGQFAAAGVNPRRHVAELRLDDEAAVAEYEVGQELTAEIFSDGAYVDVTGTSKG 120
Query 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNL 180
KGFAGTMKRHGFRGQGA+HGAQAVHRRPGSIGGCATP RVFKGTRM+GRMGNDRVT NL
Sbjct 121 KGFAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGNDRVTTQNL 180
Query 181 LVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
VHKVDAENGVLLIKGA+PGR GGLV+VRSAIKRGEK
Sbjct 181 KVHKVDAENGVLLIKGAIPGRNGGLVVVRSAIKRGEK 217
>gi|145225625|ref|YP_001136303.1| 50S ribosomal protein L3 [Mycobacterium gilvum PYR-GCK]
gi|315445978|ref|YP_004078857.1| 50S ribosomal protein L3P [Mycobacterium sp. Spyr1]
gi|189042852|sp|A4T1U2.1|RL3_MYCGI RecName: Full=50S ribosomal protein L3
gi|145218111|gb|ABP47515.1| LSU ribosomal protein L3P [Mycobacterium gilvum PYR-GCK]
gi|315264281|gb|ADU01023.1| LSU ribosomal protein L3P [Mycobacterium sp. Spyr1]
Length=218
Score = 391 bits (1004), Expect = 5e-107, Method: Compositional matrix adjust.
Identities = 193/218 (89%), Positives = 206/218 (95%), Gaps = 1/218 (0%)
Query 1 MARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPR 60
MARKGILGTKLGMTQVFDE+N+VVPVTVVKAGPNVVTRIRT ERDGYSAVQLAYGEISPR
Sbjct 1 MARKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPR 60
Query 61 KVNKPLTGQYTAAGVNPRRYLAELRL-DDSDAATEYQVGQELTAEIFADGSYVDVTGTSK 119
KVNKP+TGQ+ AAGVNPRR+LAELRL D+ DA Y+VGQELTAEIFADG+YVDVTGTSK
Sbjct 61 KVNKPVTGQFAAAGVNPRRHLAELRLADNEDAGALYEVGQELTAEIFADGAYVDVTGTSK 120
Query 120 GKGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLN 179
GKGFAGTMKRHGF+GQGASHGAQAVHRRPGSIGGCATP RVFKGTRM+GRMG+DRVT N
Sbjct 121 GKGFAGTMKRHGFKGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQN 180
Query 180 LLVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
L VHKVDAENGVLLIKGA+PGR GGLV+VRSAIKRGEK
Sbjct 181 LKVHKVDAENGVLLIKGAIPGRNGGLVVVRSAIKRGEK 218
>gi|333991978|ref|YP_004524592.1| 50S ribosomal protein L3 RplC [Mycobacterium sp. JDM601]
gi|333487946|gb|AEF37338.1| 50S ribosomal protein L3 RplC [Mycobacterium sp. JDM601]
Length=205
Score = 378 bits (971), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 182/205 (89%), Positives = 196/205 (96%), Gaps = 0/205 (0%)
Query 13 MTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVNKPLTGQYTA 72
MTQVFDE+N+VVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVNKPLTGQY A
Sbjct 1 MTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVNKPLTGQYAA 60
Query 73 AGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGFAGTMKRHGF 132
AGVNPRR+LAELRLDD++AA Y+VGQELTAEIFADG+YVDVTGTSKGKG+AGTMKRHGF
Sbjct 61 AGVNPRRHLAELRLDDAEAAATYEVGQELTAEIFADGAYVDVTGTSKGKGYAGTMKRHGF 120
Query 133 RGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVHKVDAENGVL 192
GQGA HGAQAVHRRPGSIGGC+TP RVFKGTRM+GRMGNDRVT NL+VHKVDAENGVL
Sbjct 121 AGQGAGHGAQAVHRRPGSIGGCSTPGRVFKGTRMSGRMGNDRVTTQNLVVHKVDAENGVL 180
Query 193 LIKGAVPGRTGGLVMVRSAIKRGEK 217
LIKGA+PGR GGLV+VRSAIK+GEK
Sbjct 181 LIKGAIPGRNGGLVLVRSAIKKGEK 205
>gi|169630900|ref|YP_001704549.1| 50S ribosomal protein L3 [Mycobacterium abscessus ATCC 19977]
gi|169242867|emb|CAM63895.1| 50S ribosomal protein L3 [Mycobacterium abscessus]
Length=205
Score = 370 bits (951), Expect = 5e-101, Method: Compositional matrix adjust.
Identities = 178/205 (87%), Positives = 195/205 (96%), Gaps = 0/205 (0%)
Query 13 MTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVNKPLTGQYTA 72
MTQVFD++NRVVPVTVVKAGPNVVTRIRT E+DGYSAVQLAYGEISPRKV KP+TGQ+ A
Sbjct 1 MTQVFDDNNRVVPVTVVKAGPNVVTRIRTTEQDGYSAVQLAYGEISPRKVTKPVTGQFAA 60
Query 73 AGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGFAGTMKRHGF 132
AG+NPRR+LAELRLDD AA EY+VGQELTAEIF+DG+YVDVTGTSKGKGFAGTMKRHGF
Sbjct 61 AGINPRRHLAELRLDDEAAAAEYEVGQELTAEIFSDGAYVDVTGTSKGKGFAGTMKRHGF 120
Query 133 RGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVHKVDAENGVL 192
RGQGASHGAQAVHRRPGSIGGCATP RVFKGTRM+GRMG+DRVT NL+VHKVDAENGVL
Sbjct 121 RGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVVHKVDAENGVL 180
Query 193 LIKGAVPGRTGGLVMVRSAIKRGEK 217
LIKGA+PGR GGLV+VR+A+KRGEK
Sbjct 181 LIKGAIPGRKGGLVVVRTAVKRGEK 205
>gi|226305341|ref|YP_002765299.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4]
gi|229489469|ref|ZP_04383332.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121]
gi|259709732|sp|C0ZW25.1|RL3_RHOE4 RecName: Full=50S ribosomal protein L3
gi|226184456|dbj|BAH32560.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4]
gi|229323566|gb|EEN89324.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121]
Length=218
Score = 351 bits (900), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 169/214 (79%), Positives = 193/214 (91%), Gaps = 3/214 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVT+IRT ERDGYSAVQLA+G I PRKVN
Sbjct 7 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP +GQ+T AGV PRR++ ELR+ D+ ++Y+VGQELTAE+F DG+YVDVTGTSKGKGF
Sbjct 67 KPTSGQFTKAGVTPRRHVVELRVADT---SDYEVGQELTAEVFEDGAYVDVTGTSKGKGF 123
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AGTMKRHGF+GQGASHG QAVHRRPGSIGGCATP RVFKG RM+GRMG+DR+T NL VH
Sbjct 124 AGTMKRHGFKGQGASHGTQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVH 183
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
KVDAENG+LLIKGA+PGR GGLV+V+SA+K G +
Sbjct 184 KVDAENGLLLIKGAIPGRKGGLVIVKSAVKGGAR 217
>gi|111023096|ref|YP_706068.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1]
gi|226365595|ref|YP_002783378.1| 50S ribosomal protein L3 [Rhodococcus opacus B4]
gi|123339772|sp|Q0S3H6.1|RL3_RHOSR RecName: Full=50S ribosomal protein L3
gi|254803687|sp|C1B012.1|RL3_RHOOB RecName: Full=50S ribosomal protein L3
gi|110822626|gb|ABG97910.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1]
gi|226244085|dbj|BAH54433.1| 50S ribosomal protein L3 [Rhodococcus opacus B4]
Length=218
Score = 351 bits (900), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 170/214 (80%), Positives = 192/214 (90%), Gaps = 3/214 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVT+IRT ERDGYSAVQLA+G I PRKVN
Sbjct 7 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP +GQ+ AGV PRR++ ELR+ D+ +EY+VGQELTAE+F DG+YVDVTGTSKGKGF
Sbjct 67 KPTSGQFAKAGVTPRRHVVELRVADT---SEYEVGQELTAEVFEDGAYVDVTGTSKGKGF 123
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AGTMKRHGF GQGASHGAQAVHRRPGSIGGCATP RVFKG RM+GRMG+DR+T NL VH
Sbjct 124 AGTMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVH 183
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
KVDAENG+LLIKGA+PGR GGLV+V+SA+K G +
Sbjct 184 KVDAENGLLLIKGAIPGRKGGLVIVKSAVKGGAR 217
>gi|312140918|ref|YP_004008254.1| 50S ribosomal protein l3 rplc [Rhodococcus equi 103S]
gi|325675444|ref|ZP_08155128.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707]
gi|311890257|emb|CBH49575.1| 50S ribosomal protein L3 RplC [Rhodococcus equi 103S]
gi|325553415|gb|EGD23093.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707]
Length=217
Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/212 (80%), Positives = 191/212 (91%), Gaps = 3/212 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVT+IRT ERDGYSAVQLA+G I PRKVN
Sbjct 6 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP +GQ+ AGV PRR++ ELR+ D+ +EY+VGQELTAE+F DG+YVDVTGTSKGKGF
Sbjct 66 KPTSGQFAKAGVTPRRHVVELRVADT---SEYEVGQELTAEVFEDGAYVDVTGTSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AGTMKRHGF GQGASHGAQAVHRRPGSIGGCATP RVFKG RM+GRMG+DR+T NL VH
Sbjct 123 AGTMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
KVDAENG+LLIKGA+PGR GGLV+V++A+K G
Sbjct 183 KVDAENGLLLIKGAIPGRKGGLVIVKTAVKGG 214
>gi|54022700|ref|YP_116942.1| 50S ribosomal protein L3 [Nocardia farcinica IFM 10152]
gi|81823259|sp|Q5Z1W3.1|RL3_NOCFA RecName: Full=50S ribosomal protein L3
gi|54014208|dbj|BAD55578.1| putative ribosomal protein L3 [Nocardia farcinica IFM 10152]
Length=221
Score = 344 bits (882), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 165/211 (79%), Positives = 189/211 (90%), Gaps = 3/211 (1%)
Query 5 GILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVNK 64
GILGTKLGMTQVFDE NRVVPVTV+KAGPNVVT+IRT ERDGYSAVQ+A+G I PRKVNK
Sbjct 11 GILGTKLGMTQVFDEKNRVVPVTVIKAGPNVVTQIRTEERDGYSAVQVAFGAIDPRKVNK 70
Query 65 PLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGFA 124
P+ GQ+ AGV PRR++AE+R+ D A+ ++VGQE+ A++F +GSYVDVTGTSKGKG+A
Sbjct 71 PVAGQFAKAGVTPRRHIAEIRVAD---ASSFEVGQEINADVFEEGSYVDVTGTSKGKGYA 127
Query 125 GTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVHK 184
GTMKRHGFRGQGASHGAQAVHRRPGSIGGCATP RVFKG RMAGRMGNDRVT NL VHK
Sbjct 128 GTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMAGRMGNDRVTTQNLSVHK 187
Query 185 VDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
VDAENG+LLIKGA+PGR GG+V+V+SA+K G
Sbjct 188 VDAENGLLLIKGAIPGRKGGVVIVKSAVKGG 218
>gi|262203624|ref|YP_003274832.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247]
gi|262086971|gb|ACY22939.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247]
Length=219
Score = 335 bits (858), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/216 (75%), Positives = 187/216 (87%), Gaps = 3/216 (1%)
Query 2 ARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRK 61
A KGILGTKLGMTQVFDE+NRVVPVTV++AGPNV+T++RT +RDGY+AVQLAYG I PRK
Sbjct 6 ATKGILGTKLGMTQVFDENNRVVPVTVIQAGPNVITQLRTADRDGYTAVQLAYGAIDPRK 65
Query 62 VNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGK 121
V KP+ GQY+ AGV PRR+LAE+R++D +E++VGQELTAE+FA+GS VDVTGTSKGK
Sbjct 66 VTKPVAGQYSKAGVTPRRHLAEIRVND---VSEFEVGQELTAEVFAEGSLVDVTGTSKGK 122
Query 122 GFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLL 181
GFAG MKRHGF G GASHGA VHR PGSIGGCATP RVFKG RMAGRMGND+VT NL
Sbjct 123 GFAGVMKRHGFSGLGASHGAHRVHRAPGSIGGCATPGRVFKGMRMAGRMGNDKVTTQNLT 182
Query 182 VHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
VHKVDAE G+LLIKGA+PGR GG+V+VR A+K G K
Sbjct 183 VHKVDAEAGLLLIKGAIPGRKGGIVVVRDAVKGGAK 218
>gi|343927783|ref|ZP_08767251.1| 50S ribosomal protein L3 [Gordonia alkanivorans NBRC 16433]
gi|343762424|dbj|GAA14177.1| 50S ribosomal protein L3 [Gordonia alkanivorans NBRC 16433]
Length=218
Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/216 (75%), Positives = 186/216 (87%), Gaps = 3/216 (1%)
Query 2 ARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRK 61
+ KGILGTKLGMTQVFDE+NRVVPVTV++AGPNV+T++RT +RDGY+AVQLAYG I PRK
Sbjct 6 SSKGILGTKLGMTQVFDENNRVVPVTVIQAGPNVITQLRTQDRDGYTAVQLAYGAIDPRK 65
Query 62 VNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGK 121
V KP+ GQY AGV PRR+LAE+R++D +E+++GQELTAEIFADG+ VDVTGTSKGK
Sbjct 66 VTKPVAGQYEKAGVTPRRHLAEIRVND---VSEFEIGQELTAEIFADGALVDVTGTSKGK 122
Query 122 GFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLL 181
GFAG MKRHGF G GASHGA VHR PGSIGGCATP RVFKG RMAGRMGND+VT NL
Sbjct 123 GFAGVMKRHGFAGLGASHGAHRVHRAPGSIGGCATPGRVFKGMRMAGRMGNDKVTTQNLT 182
Query 182 VHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
VHKVDAE G+LLIKGA+PGR GG+V+VR A+K G K
Sbjct 183 VHKVDAEAGLLLIKGAIPGRKGGIVVVRDAVKGGAK 218
>gi|319948723|ref|ZP_08022844.1| 50S ribosomal protein L3 [Dietzia cinnamea P4]
gi|319437625|gb|EFV92624.1| 50S ribosomal protein L3 [Dietzia cinnamea P4]
Length=221
Score = 332 bits (850), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/214 (74%), Positives = 185/214 (87%), Gaps = 0/214 (0%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQVFDE+NRVVPVTVVKAGP VVT IRT E DGY+AVQ+A+G + PRKV
Sbjct 7 KGILGAKLGMTQVFDENNRVVPVTVVKAGPCVVTGIRTEENDGYNAVQIAFGAVDPRKVT 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP+ GQ+ AGV PRR++AE+RLD+++ A Y++GQE+ A++F DG++VDVTGTSKGKGF
Sbjct 67 KPVAGQFEKAGVTPRRHIAEIRLDNAEQAAGYEIGQEIGADVFEDGAFVDVTGTSKGKGF 126
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AGTMKRHGF GQGASHG QAVHR+PGSIGG +TP RVFKG MAGRMGN+RVT +NL VH
Sbjct 127 AGTMKRHGFAGQGASHGTQAVHRKPGSIGGASTPGRVFKGKAMAGRMGNERVTTMNLKVH 186
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
KVDAE GVLLIKGA+PGR GGLVMVRSA+K G +
Sbjct 187 KVDAEAGVLLIKGAIPGRNGGLVMVRSAVKGGAR 220
>gi|134103264|ref|YP_001108925.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
gi|291007943|ref|ZP_06565916.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
gi|166234589|sp|A4FPM5.1|RL3_SACEN RecName: Full=50S ribosomal protein L3
gi|133915887|emb|CAM06000.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
Length=216
Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/212 (76%), Positives = 182/212 (86%), Gaps = 3/212 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILGTKLGMTQVFD+ NRVVPVTVV+AGPNVVT+IRTPE+DGYSAVQLA+G I PRKVN
Sbjct 7 KGILGTKLGMTQVFDDQNRVVPVTVVQAGPNVVTQIRTPEKDGYSAVQLAFGAIDPRKVN 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP TG +T AGV PRR++ ELR D A EY+VGQE+TAE+F G+ VDV GTSKGKGF
Sbjct 67 KPRTGHFTKAGVTPRRHVVELRTAD---AGEYEVGQEVTAEVFEAGTVVDVVGTSKGKGF 123
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AGTMKRHGFRGQGASHG QAVHR+PGSIGGCATP RVFKG RM+GRMG+DRVT NL VH
Sbjct 124 AGTMKRHGFRGQGASHGTQAVHRKPGSIGGCATPGRVFKGMRMSGRMGSDRVTTQNLKVH 183
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
+V+ E+G+LLIKGA+PG GGLV+V+S K G
Sbjct 184 RVEGESGLLLIKGAIPGPKGGLVLVKSPAKGG 215
>gi|296141115|ref|YP_003648358.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162]
gi|296029249|gb|ADG80019.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162]
Length=218
Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/214 (74%), Positives = 183/214 (86%), Gaps = 3/214 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVT+IRT DGY AVQ+A+G I PRKVN
Sbjct 7 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEATDGYDAVQIAFGAIDPRKVN 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP++GQ+ AGV PRR++AELR+ D+ +EY+VGQEL A++F+ G +VDVTG SKGKG+
Sbjct 67 KPVSGQFAKAGVTPRRHIAELRIADT---SEYEVGQELGADVFSGGEFVDVTGISKGKGY 123
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRHGF G GASHGAQAVHR PGSIGGCATP RVFKG RMAGRMG+D+VT NL V
Sbjct 124 AGVMKRHGFAGLGASHGAQAVHRAPGSIGGCATPGRVFKGVRMAGRMGSDKVTTQNLTVF 183
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
KVDA+ GVLLIKGA+PGR GGLVMVR+A+K G +
Sbjct 184 KVDADAGVLLIKGAIPGRKGGLVMVRTAVKGGAR 217
>gi|300782608|ref|YP_003762899.1| 50S ribosomal protein L3 [Amycolatopsis mediterranei U32]
gi|299792122|gb|ADJ42497.1| large subunit ribosomal protein L3 [Amycolatopsis mediterranei
U32]
gi|340523979|gb|AEK39184.1| 50S ribosomal protein L3 [Amycolatopsis mediterranei S699]
Length=218
Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/213 (75%), Positives = 181/213 (85%), Gaps = 3/213 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILGTKLGMTQVFDE NRVVPVTVVKAGPNVVT++RT ++DGY+AVQLA+G + PRKVN
Sbjct 7 KGILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTQDKDGYTAVQLAFGAVDPRKVN 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP TG + AGV PRR+LAELR D++ Y+VGQE+TAE+FA G VDVTGTSKGKG+
Sbjct 67 KPRTGHFDKAGVTPRRFLAELRTTDAET---YEVGQEITAEVFAAGVEVDVTGTSKGKGY 123
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRHGF+GQGASHGAQAVHR+PGSIGGCATP RVFKG RMAGRMGNDRVT NL VH
Sbjct 124 AGVMKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGNDRVTTQNLTVH 183
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGE 216
V A++G+LLIKGAVPG GG++ VRSA K G
Sbjct 184 AVRADDGLLLIKGAVPGPKGGVLFVRSAAKGGN 216
>gi|326385099|ref|ZP_08206769.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395]
gi|326196184|gb|EGD53388.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395]
Length=218
Score = 322 bits (824), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 157/216 (73%), Positives = 182/216 (85%), Gaps = 3/216 (1%)
Query 2 ARKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRK 61
A KGILGTKLGMTQVFDE+NRVVPVTV+ G NVVT++RT +RDGY+A+QLAYG I PRK
Sbjct 6 ATKGILGTKLGMTQVFDENNRVVPVTVIATGSNVVTQLRTADRDGYTAIQLAYGAIDPRK 65
Query 62 VNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGK 121
VNKP+ GQ+ AGV PRR+L E+R++D +E++VGQEL A+IFA+G VDVTGTSKGK
Sbjct 66 VNKPVAGQFAKAGVTPRRHLTEIRIND---ISEFEVGQELGADIFAEGVKVDVTGTSKGK 122
Query 122 GFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLL 181
GFAG MKRHGF G GASHGA VHR PGSIGGCATP RVFKGTRMAGRMG+D+VT NL
Sbjct 123 GFAGVMKRHGFAGLGASHGAHRVHRSPGSIGGCATPGRVFKGTRMAGRMGSDKVTTQNLT 182
Query 182 VHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGEK 217
VHKVDAE G+LLIKGA+PGR GG+V+VR A+K G K
Sbjct 183 VHKVDAEAGLLLIKGAIPGRKGGIVVVRDAVKGGAK 218
>gi|317507409|ref|ZP_07965143.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974]
gi|316254294|gb|EFV13630.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974]
Length=212
Score = 320 bits (821), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 157/211 (75%), Positives = 177/211 (84%), Gaps = 3/211 (1%)
Query 5 GILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVNK 64
G+LG KLGMTQVFDE NRVVPVTV++ G N+VT+IRTPERD YSAVQLA+G+I PRKVNK
Sbjct 2 GLLGAKLGMTQVFDERNRVVPVTVIRTGVNIVTQIRTPERDKYSAVQLAFGQIDPRKVNK 61
Query 65 PLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGFA 124
PLTGQ+ AGV PRR+LAELRL+D + Y+VGQ+L +FADG VDVTGTSKGKGFA
Sbjct 62 PLTGQFEKAGVTPRRHLAELRLED---VSGYEVGQQLDVSVFADGDLVDVTGTSKGKGFA 118
Query 125 GTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVHK 184
GTMKRHGF+GQGA+HGA VHRRPGSIG CA P RVFKGTRMAGRMGN + T NL V +
Sbjct 119 GTMKRHGFKGQGAAHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTVFR 178
Query 185 VDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
VD E GVLLIKGAVPGR GGLV VRSA+K+G
Sbjct 179 VDPEAGVLLIKGAVPGRDGGLVFVRSAVKKG 209
>gi|302523993|ref|ZP_07276335.1| 50S ribosomal protein L3 [Streptomyces sp. AA4]
gi|302432888|gb|EFL04704.1| 50S ribosomal protein L3 [Streptomyces sp. AA4]
Length=216
Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/213 (75%), Positives = 180/213 (85%), Gaps = 3/213 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILGTKLGMTQVFDE NRVVPVTVVKAGPNVVT++RT ++DGY+AVQLA+G + PRKVN
Sbjct 7 KGILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTTDKDGYAAVQLAFGAVDPRKVN 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP TG + AGV PRR+LAELR D++ Y+VGQE+TAE+F G+ VDVTGTSKGKG+
Sbjct 67 KPRTGHFDKAGVTPRRHLAELRTTDAET---YEVGQEITAEVFEAGTTVDVTGTSKGKGY 123
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRHGF+GQGASHGAQAVHR+PGSIGGCATP RVFKG RMAGRMG+DRVT L VH
Sbjct 124 AGVMKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGSDRVTTQGLTVH 183
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGE 216
V AE+G+LLIKGAVPG GGL+ VRSA K G
Sbjct 184 AVRAEDGLLLIKGAVPGPKGGLLFVRSAAKGGN 216
>gi|296392585|ref|YP_003657469.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985]
gi|296179732|gb|ADG96638.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985]
Length=221
Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/213 (73%), Positives = 175/213 (83%), Gaps = 3/213 (1%)
Query 3 RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62
R G+LG KLGMTQVFDE NRVVPVTV++ G NVVT++RTPERD YSA+QLA+G I PRKV
Sbjct 9 RVGLLGAKLGMTQVFDERNRVVPVTVIRTGVNVVTQVRTPERDKYSAIQLAFGHIDPRKV 68
Query 63 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122
NKPL GQ+ AGV PRR+LAE RLDD + Y+VGQ++ A +F+ G VDVTGTSKGKG
Sbjct 69 NKPLAGQFEKAGVTPRRHLAEFRLDD---VSGYEVGQQIDATVFSAGDLVDVTGTSKGKG 125
Query 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182
FAGTMKRHGF+GQGASHGA VHRRPGSIG CA P RVFKGTRMAGRMGN + T NL V
Sbjct 126 FAGTMKRHGFKGQGASHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTV 185
Query 183 HKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
+VD E GVLLIKGAVPGR GGLV +RSA+K+G
Sbjct 186 FRVDPEAGVLLIKGAVPGRDGGLVFIRSAVKKG 218
>gi|257054470|ref|YP_003132302.1| 50S ribosomal protein L3P [Saccharomonospora viridis DSM 43017]
gi|256584342|gb|ACU95475.1| LSU ribosomal protein L3P [Saccharomonospora viridis DSM 43017]
Length=213
Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/212 (75%), Positives = 175/212 (83%), Gaps = 3/212 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILGTKLGMTQVFDE+NRVVPVTVVKAGPNVVT++R+ E+DGYSAVQLA+G I PR+VN
Sbjct 2 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQVRSKEKDGYSAVQLAFGNIDPRRVN 61
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP G + AGV PRRYLAELR D+D+ Y+VGQE+TA++F+DG+ VDVTGTSKGKGF
Sbjct 62 KPQAGHFEKAGVTPRRYLAELRTSDADS---YEVGQEITADVFSDGAVVDVTGTSKGKGF 118
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRHGF GQGASHG QA HR PGSIGG ATP RVFKG RMAGR GN RVT L +H
Sbjct 119 AGVMKRHGFAGQGASHGNQATHRAPGSIGGAATPGRVFKGKRMAGRAGNKRVTTQGLTIH 178
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
V AE G+LLIKGAVPG GGLV VRSA K G
Sbjct 179 SVRAEEGLLLIKGAVPGPKGGLVFVRSAAKGG 210
>gi|333918147|ref|YP_004491728.1| 50S ribosomal protein L3 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480368|gb|AEF38928.1| 50S ribosomal protein L3 [Amycolicicoccus subflavus DQS3-9A1]
Length=219
Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/213 (73%), Positives = 179/213 (85%), Gaps = 3/213 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQVFD+ NRVVPVTVVKAGP VV +RT E DGY+AV+LA+G I PRKV
Sbjct 10 KGILGNKLGMTQVFDDRNRVVPVTVVKAGPCVVVGVRTEETDGYNAVRLAFGAIDPRKVT 69
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP+ GQY AG PRR+L ELR+ D ++Y+VGQE+TA++FADG+ VDVTG SKGKG
Sbjct 70 KPVAGQYAKAGATPRRHLVELRVADP---SQYEVGQEVTADVFADGATVDVTGISKGKGT 126
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRHGF GQGASHGAQAVHRRPGSIGGCATP RVFKG RMAGRMGN+RVT NL V+
Sbjct 127 AGVMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVY 186
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRGE 216
KVD++ G+LLIKGA+PGR GGLV+V++A+K GE
Sbjct 187 KVDSDAGLLLIKGAIPGRKGGLVVVKTAVKGGE 219
>gi|328884426|emb|CCA57665.1| LSU ribosomal protein L3p [Streptomyces venezuelae ATCC 10712]
Length=218
Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/210 (73%), Positives = 171/210 (82%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQV+DE+NRVVPVTVVKAGPNVVT++RT + DGY +VQ+A+GEI PRKVN
Sbjct 10 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDIDGYESVQIAFGEIDPRKVN 69
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L ELR D A+EY +GQE+TAE+F G VDVTG SKGKGF
Sbjct 70 KPLKGHFAKADVTPRRHLVELRTAD---ASEYTLGQEITAEVFEAGVKVDVTGKSKGKGF 126
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH FRG ASHGA VHR+PGSIGGCATP RVFKG RMAGRMGN+RVT NL VH
Sbjct 127 AGVMKRHNFRGGKASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 186
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 187 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 216
>gi|237786395|ref|YP_002907100.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM
44385]
gi|259647406|sp|C4LL52.1|RL3_CORK4 RecName: Full=50S ribosomal protein L3
gi|237759307|gb|ACR18557.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM
44385]
Length=219
Score = 304 bits (779), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/212 (70%), Positives = 176/212 (84%), Gaps = 2/212 (0%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILGTKLGMTQVFDE NRVVPVTVV+AGP VVT+IRT E+DGYSA+Q+AYG+I PRKVN
Sbjct 7 KGILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTEEKDGYSAIQIAYGDIDPRKVN 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP +G + AGV PRRY+ E+R+DD ++Y+VGQ++T E+F D +VDVTGT++G GF
Sbjct 67 KPQSGHFAKAGVTPRRYVTEIRMDD--VLSDYEVGQDVTVELFGDVKFVDVTGTTRGHGF 124
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRHGF GQGA+HG QA HRR G IG CATP RVFKGTRMAGRMGN+RVT NL +
Sbjct 125 AGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNRVTTQNLKLF 184
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
KVDA++ +LLIKGAVPG GGLV V++A+K G
Sbjct 185 KVDADSNLLLIKGAVPGIRGGLVTVKTAVKGG 216
>gi|227505216|ref|ZP_03935265.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940]
gi|227198190|gb|EEI78238.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940]
Length=218
Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/212 (69%), Positives = 174/212 (83%), Gaps = 3/212 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQ+FDE NRVVPVTVV+AGP VVT+IRT E DGY+A+Q+A+GEI PRK N
Sbjct 7 KGILGKKLGMTQIFDEDNRVVPVTVVEAGPCVVTQIRTAETDGYNAIQIAFGEIDPRKAN 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP G + AGV PRR++AE+R+DD+ A Y+VGQE+TA+IF ++VDVTGT+KG G+
Sbjct 67 KPAAGHFKKAGVTPRRHVAEIRMDDTSA---YEVGQEVTADIFEGITFVDVTGTTKGHGY 123
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRHGF GQGA+HG QA HRR G IG CATPARVFKGTRMAGRMG DRVT NL +
Sbjct 124 AGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPARVFKGTRMAGRMGQDRVTTQNLKIQ 183
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
K+DAE+ +LLIKGA+PG GGLV V++A+K G
Sbjct 184 KIDAESNLLLIKGAIPGARGGLVTVKTAVKGG 215
>gi|302558994|ref|ZP_07311336.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000]
gi|302476612|gb|EFL39705.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000]
Length=214
Score = 301 bits (772), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/210 (71%), Positives = 169/210 (81%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQV+DE+NRVVPVTVVKAGPNVVT++RT + DGY +VQ+A+GEI PRKVN
Sbjct 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L E+R D A+EY +GQE+TAE+F G VDVTG SKGKGF
Sbjct 66 KPLKGHFAKADVTPRRHLVEIRTSD---ASEYTLGQEVTAEVFESGVKVDVTGKSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH F+G GA HG Q HR PGSIGGCATP RVFKG RMAGRMGN+RVT NL VH
Sbjct 123 AGVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
>gi|297201729|ref|ZP_06919126.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083]
gi|197710896|gb|EDY54930.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083]
Length=214
Score = 301 bits (770), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 149/210 (71%), Positives = 169/210 (81%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQV+DE+NRVVPVTVVKAGPNVVT++RT + DGY +VQ+A+GEI PRKVN
Sbjct 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L E+R D A+EY +GQE+TAE+F G VDVTG SKGKGF
Sbjct 66 KPLKGHFAKADVTPRRHLVEIRTAD---ASEYTLGQEITAEVFEAGIKVDVTGKSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH F+G GA HG Q HR PGSIGGCATP RVFKG RMAGRMGN+RVT NL VH
Sbjct 123 AGVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
>gi|297159597|gb|ADI09309.1| 50S ribosomal protein L3 [Streptomyces bingchenggensis BCW-1]
Length=214
Score = 300 bits (769), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 149/210 (71%), Positives = 169/210 (81%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KG+LG KLGMTQV+DE+NR+VPVTVVKAGP VVT++RT + DGY AVQ+A+GEI PRKVN
Sbjct 6 KGVLGEKLGMTQVWDENNRIVPVTVVKAGPCVVTQVRTADSDGYDAVQIAFGEIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L ELR D A+EY +GQE+TAE+F G VDVTGTSKGKG
Sbjct 66 KPLKGHFAKADVTPRRHLVELRTAD---ASEYALGQEVTAEVFESGVKVDVTGTSKGKGT 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRHGF+G GA HG Q HR PGSIGGCATP RVFKG RMAGRMGN+RVT NL VH
Sbjct 123 AGVMKRHGFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
>gi|256380598|ref|YP_003104258.1| 50S ribosomal protein L3 [Actinosynnema mirum DSM 43827]
gi|255924901|gb|ACU40412.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827]
Length=216
Score = 300 bits (769), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 152/212 (72%), Positives = 172/212 (82%), Gaps = 3/212 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KG+LGTKLGMTQVFDE+NRVVPVTVVKA PNVVT++RT E DGYSAVQLA+G I PRKV
Sbjct 7 KGLLGTKLGMTQVFDENNRVVPVTVVKAEPNVVTQVRTQENDGYSAVQLAFGAIDPRKVI 66
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KP+ G + AGV PRR+LAELR D A+EYQVGQE+TAE+F G+ VDV GTS+GKG+
Sbjct 67 KPVAGHFAKAGVTPRRHLAELRTTD---ASEYQVGQEITAEVFEAGAVVDVVGTSRGKGY 123
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRHGF G GASHG Q HR PGSIGGCATP RVFKG RMAGRMG+ RVT NL V
Sbjct 124 AGVMKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGHARVTTQNLKVF 183
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
+VDAE+G+LLIKGAVPG GG V V++A K G
Sbjct 184 RVDAESGLLLIKGAVPGPKGGTVFVKTAAKGG 215
>gi|302536251|ref|ZP_07288593.1| 50S ribosomal protein L3 [Streptomyces sp. C]
gi|302445146|gb|EFL16962.1| 50S ribosomal protein L3 [Streptomyces sp. C]
Length=214
Score = 300 bits (768), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 148/210 (71%), Positives = 168/210 (80%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KG+LG KLGMTQV+DE+NRVVPVTVVKAGP VVT++RT + DGY +VQ+A+GEI PRKVN
Sbjct 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L ELR D A+EY +GQE+TAE+F G VDVTG SKGKGF
Sbjct 66 KPLKGHFAKADVTPRRHLVELRTSD---ASEYTLGQEITAEVFESGVKVDVTGNSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH FRG GA HG Q HR PGSIGGCATP RVFKG RMAGRMGN+RVT NL +H
Sbjct 123 AGVMKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
>gi|29831469|ref|NP_826103.1| 50S ribosomal protein L3 [Streptomyces avermitilis MA-4680]
gi|42559612|sp|Q82DP5.1|RL3_STRAW RecName: Full=50S ribosomal protein L3
gi|29608584|dbj|BAC72638.1| putative ribosomal protein L3 [Streptomyces avermitilis MA-4680]
Length=214
Score = 300 bits (768), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/210 (71%), Positives = 168/210 (80%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQV+DE+NRVVPVTVVKAGPNVVT++RT + DGY +VQ+A+GEI PRKVN
Sbjct 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L E+R D A+EY +GQE+TAE F G VDVTG SKGKGF
Sbjct 66 KPLKGHFAKADVTPRRHLVEIRTAD---ASEYTLGQEITAETFEAGVKVDVTGKSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH F+G GA HG Q HR PGSIGGCATP RVFKG RMAGRMGN+RVT NL VH
Sbjct 123 AGVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
>gi|296268550|ref|YP_003651182.1| 50S ribosomal protein L3 [Thermobispora bispora DSM 43833]
gi|296091337|gb|ADG87289.1| ribosomal protein L3 [Thermobispora bispora DSM 43833]
Length=218
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/217 (69%), Positives = 170/217 (79%), Gaps = 5/217 (2%)
Query 1 MAR--KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEIS 58
MAR KG+LG KLGMTQVFDE+NRVVPVTVV+AGP VVTR+RTPE+DGYSA+QL YG+I
Sbjct 1 MARQIKGVLGKKLGMTQVFDEANRVVPVTVVEAGPCVVTRVRTPEKDGYSAIQLGYGQID 60
Query 59 PRKVNKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTS 118
PRKVNKPL + PRRY AE+R DD A+EY +GQE+T +IF G YVDVTG S
Sbjct 61 PRKVNKPLGDYLRKHNITPRRYFAEIRTDD---ASEYTLGQEITVDIFQPGDYVDVTGRS 117
Query 119 KGKGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVL 178
KGKGFAG MKRHGFRG G SHG Q HR PGSIG CATP RVFKG RMAGRMGN R TV
Sbjct 118 KGKGFAGVMKRHGFRGLGGSHGTQRKHRSPGSIGACATPGRVFKGLRMAGRMGNARTTVQ 177
Query 179 NLLVHKVDAENGVLLIKGAVPGRTGGLVMVRSAIKRG 215
NL V VDAE ++L+KGA+PG G LV++R+A+K+G
Sbjct 178 NLKVQAVDAEKNLILVKGAIPGANGSLVLIRTAVKKG 214
>gi|302553542|ref|ZP_07305884.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM
40736]
gi|302471160|gb|EFL34253.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM
40736]
Length=214
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/210 (71%), Positives = 169/210 (81%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQV+D +NRVVPVTVVKAGPNVVT++RT + DGY +VQ+A+GEI PRKVN
Sbjct 6 KGILGEKLGMTQVWDANNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G ++ A V PRR+L E+R D A+EY +GQE+TAE+F G VDVTG SKGKGF
Sbjct 66 KPLKGHFSKADVTPRRHLVEIRTAD---ASEYTLGQEITAEVFEAGVKVDVTGKSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH FRG GA HG Q HR PGSIGGCATP RVFKG RMAGRMGN+RVT NL VH
Sbjct 123 AGVMKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
>gi|182436627|ref|YP_001824346.1| 50S ribosomal protein L3 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326777249|ref|ZP_08236514.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1]
gi|226730571|sp|B1W407.1|RL3_STRGG RecName: Full=50S ribosomal protein L3
gi|178465143|dbj|BAG19663.1| putative 50S ribosomal protein L3 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326657582|gb|EGE42428.1| 50S ribosomal protein L3 [Streptomyces griseus XylebKG-1]
Length=214
Score = 300 bits (767), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/210 (71%), Positives = 168/210 (80%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KG+LG KLGMTQV+DE+NRVVPVTVVKAGP VVT++RT + DGY AVQ+A+GEI PRKVN
Sbjct 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L ELR D A+EY +GQE+TAE+F G VDVTG SKGKGF
Sbjct 66 KPLKGHFAKADVTPRRHLVELRTPD---ASEYTLGQEVTAEVFESGVKVDVTGKSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH F+G GA HG Q HR PGSIGGCATP RVFKG RMAGRMGN+RVT NL +H
Sbjct 123 AGVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
>gi|290958151|ref|YP_003489333.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22]
gi|260647677|emb|CBG70782.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22]
Length=214
Score = 300 bits (767), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/210 (71%), Positives = 169/210 (81%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQV+DE+NRVVPVTVVKAGPNVVT++RT + DGY +VQ+A+GEI PRKVN
Sbjct 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L E+R D A+EY +GQE++AE+F G VDVTG SKGKGF
Sbjct 66 KPLKGHFAKADVTPRRHLVEIRTAD---ASEYTLGQEISAEVFEAGVKVDVTGKSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH F+G GA HG Q HR PGSIGGCATP RVFKG RMAGRMGN+RVT NL VH
Sbjct 123 AGVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
>gi|21223082|ref|NP_628861.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)]
gi|289769715|ref|ZP_06529093.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
gi|42559700|sp|Q9L0E0.1|RL3_STRCO RecName: Full=50S ribosomal protein L3
gi|7321292|emb|CAB82070.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)]
gi|289699914|gb|EFD67343.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
Length=214
Score = 300 bits (767), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/210 (71%), Positives = 169/210 (81%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQV+DE+NRVVPVTVVKAGPNVVT++RT + DGY +VQ+A+GEI PRKVN
Sbjct 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L E+R + AA+EY +GQE+TAE F G VDVT SKGKGF
Sbjct 66 KPLKGHFAKADVTPRRHLVEIR---TAAASEYTLGQEITAEAFESGVKVDVTAKSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH F+G ASHGA VHR PGSIGGCATP RVFKG RMAGRMGN+RVT NL VH
Sbjct 123 AGVMKRHNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
>gi|329938232|ref|ZP_08287683.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045]
gi|329302721|gb|EGG46611.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045]
Length=214
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/210 (71%), Positives = 168/210 (80%), Gaps = 3/210 (1%)
Query 4 KGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVN 63
KGILG KLGMTQV+DE+NRVVPVTVVKAGPNVVT++RT + DGY +VQ+A+G+I PRKVN
Sbjct 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGDIDPRKVN 65
Query 64 KPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGF 123
KPL G + A V PRR+L E+R D A EY +GQE+TAE+F G VDVTG SKGKGF
Sbjct 66 KPLKGHFAKADVTPRRHLVEIRTAD---AAEYTLGQEVTAEVFESGVKVDVTGKSKGKGF 122
Query 124 AGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVH 183
AG MKRH F+G GA HG Q HR PGSIGGCATP RVFKG RMAGRMGN+RVT NL VH
Sbjct 123 AGVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 182
Query 184 KVDAENGVLLIKGAVPGRTGGLVMVRSAIK 213
VDAE G+LLIKGAVPG GGLV+VR+A K
Sbjct 183 AVDAEKGLLLIKGAVPGPNGGLVLVRTAAK 212
Lambda K H
0.317 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 263865364408
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40