BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0702
Length=223
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607842|ref|NP_215216.1| 50S ribosomal protein L4 [Mycobacte... 451 5e-125
gi|340625722|ref|YP_004744174.1| putative 50S ribosomal protein ... 450 7e-125
gi|2113867|emb|CAA73673.1| rplD [Mycobacterium bovis BCG] 440 9e-122
gi|254822786|ref|ZP_05227787.1| 50S ribosomal protein L4 [Mycoba... 418 3e-115
gi|118466008|ref|YP_883605.1| 50S ribosomal protein L4 [Mycobact... 407 5e-112
gi|41410260|ref|NP_963096.1| 50S ribosomal protein L4 [Mycobacte... 407 6e-112
gi|183981054|ref|YP_001849345.1| 50S ribosomal protein L4, RplD ... 400 6e-110
gi|296168558|ref|ZP_06850362.1| 50S ribosomal protein L4 [Mycoba... 399 2e-109
gi|342861792|ref|ZP_08718437.1| 50S ribosomal protein L4 [Mycoba... 398 4e-109
gi|240167704|ref|ZP_04746363.1| 50S ribosomal protein L4 [Mycoba... 397 5e-109
gi|118616572|ref|YP_904904.1| 50S ribosomal protein L4 [Mycobact... 396 1e-108
gi|333991977|ref|YP_004524591.1| 50S ribosomal protein L4 RplD [... 387 4e-106
gi|15828001|ref|NP_302264.1| 50S ribosomal protein L4 [Mycobacte... 385 2e-105
gi|118470088|ref|YP_885820.1| 50S ribosomal protein L4 [Mycobact... 381 4e-104
gi|3122740|sp|O06114.1|RL4_MYCSM RecName: Full=50S ribosomal pro... 380 9e-104
gi|108797987|ref|YP_638184.1| 50S ribosomal protein L4 [Mycobact... 378 3e-103
gi|120402317|ref|YP_952146.1| 50S ribosomal protein L4 [Mycobact... 378 4e-103
gi|145225624|ref|YP_001136302.1| 50S ribosomal protein L4 [Mycob... 371 5e-101
gi|169630899|ref|YP_001704548.1| 50S ribosomal protein L4 [Mycob... 358 3e-97
gi|209165347|gb|ACI41235.1| ribosomal protein L4 [Mycobacterium ... 345 3e-93
gi|209165345|gb|ACI41234.1| ribosomal protein L4 [Mycobacterium ... 343 1e-92
gi|209165351|gb|ACI41237.1| ribosomal protein L4 [Mycobacterium ... 343 1e-92
gi|226365596|ref|YP_002783379.1| 50S ribosomal protein L4 [Rhodo... 334 5e-90
gi|111023097|ref|YP_706069.1| 50S ribosomal protein L4 [Rhodococ... 332 4e-89
gi|226305342|ref|YP_002765300.1| 50S ribosomal protein L4 [Rhodo... 327 1e-87
gi|312140917|ref|YP_004008253.1| 50S ribosomal protein l4 rpld [... 325 3e-87
gi|54022701|ref|YP_116943.1| 50S ribosomal protein L4 [Nocardia ... 324 7e-87
gi|337290016|ref|YP_004629037.1| 50S ribosomal protein L4 [Coryn... 323 2e-86
gi|300857763|ref|YP_003782746.1| 50S ribosomal protein L4 [Coryn... 322 2e-86
gi|333918148|ref|YP_004491729.1| 50S ribosomal protein L4 [Amyco... 318 3e-85
gi|19551747|ref|NP_599749.1| 50S ribosomal protein L4 [Corynebac... 318 5e-85
gi|336326438|ref|YP_004606404.1| 50S ribosomal protein L4 [Coryn... 318 5e-85
gi|260579266|ref|ZP_05847150.1| 50S ribosomal protein L4 [Coryne... 316 2e-84
gi|68536922|ref|YP_251627.1| 50S ribosomal protein L4 [Corynebac... 315 2e-84
gi|319948722|ref|ZP_08022843.1| 50S ribosomal protein L4 [Dietzi... 315 2e-84
gi|262203623|ref|YP_003274831.1| 50S ribosomal protein L4/L1e [G... 315 3e-84
gi|213965010|ref|ZP_03393209.1| ribosomal protein L4/L1 family p... 314 6e-84
gi|296392586|ref|YP_003657470.1| 50S ribosomal protein L4/L1e [S... 313 8e-84
gi|227541711|ref|ZP_03971760.1| 50S ribosomal protein L4 [Coryne... 313 8e-84
gi|38233086|ref|NP_938853.1| 50S ribosomal protein L4 [Corynebac... 313 2e-83
gi|227487122|ref|ZP_03917438.1| 50S ribosomal protein L4 [Coryne... 311 4e-83
gi|317507410|ref|ZP_07965144.1| ribosomal protein L4/L1 family p... 311 4e-83
gi|296119210|ref|ZP_06837780.1| ribosomal protein L4/L1 family p... 311 5e-83
gi|25027079|ref|NP_737133.1| 50S ribosomal protein L4 [Corynebac... 311 6e-83
gi|343927782|ref|ZP_08767250.1| 50S ribosomal protein L4 [Gordon... 310 8e-83
gi|296141114|ref|YP_003648357.1| 50S ribosomal protein L4/L1e [T... 310 1e-82
gi|255324737|ref|ZP_05365851.1| ribosomal protein L4/L1 family p... 306 1e-81
gi|227505215|ref|ZP_03935264.1| 50S ribosomal protein L4 [Coryne... 305 4e-81
gi|227832220|ref|YP_002833927.1| 50S ribosomal protein L4 [Coryn... 304 5e-81
gi|334564057|ref|ZP_08517048.1| 50S ribosomal protein L4 [Coryne... 304 7e-81
>gi|15607842|ref|NP_215216.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Rv]
gi|15840109|ref|NP_335146.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CDC1551]
gi|31791887|ref|NP_854380.1| 50S ribosomal protein L4 [Mycobacterium bovis AF2122/97]
83 more sequence titles
Length=223
Score = 451 bits (1159), Expect = 5e-125, Method: Compositional matrix adjust.
Identities = 223/223 (100%), Positives = 223/223 (100%), Gaps = 0/223 (0%)
Query 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT
Sbjct 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
Query 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA
Sbjct 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
Query 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG
Sbjct 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
Query 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA
Sbjct 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
>gi|340625722|ref|YP_004744174.1| putative 50S ribosomal protein L4 RPLD [Mycobacterium canettii
CIPT 140010059]
gi|340003912|emb|CCC43046.1| putative 50S ribosomal protein L4 RPLD [Mycobacterium canettii
CIPT 140010059]
Length=223
Score = 450 bits (1157), Expect = 7e-125, Method: Compositional matrix adjust.
Identities = 222/223 (99%), Positives = 223/223 (100%), Gaps = 0/223 (0%)
Query 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT
Sbjct 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
Query 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA
Sbjct 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
Query 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
LSDRARNGRIHA+TELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG
Sbjct 121 LSDRARNGRIHAVTELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
Query 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA
Sbjct 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
>gi|2113867|emb|CAA73673.1| rplD [Mycobacterium bovis BCG]
Length=223
Score = 440 bits (1131), Expect = 9e-122, Method: Compositional matrix adjust.
Identities = 218/223 (98%), Positives = 219/223 (99%), Gaps = 0/223 (0%)
Query 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT
Sbjct 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
Query 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA
Sbjct 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
Query 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
LSDRARNGRIHAITELVEGQNPSTKSARAFL SLTERKQVLVVIGRSDE +SVRNLPG
Sbjct 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLVSLTERKQVLVVIGRSDEGRRESVRNLPG 180
Query 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA
Sbjct 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
>gi|254822786|ref|ZP_05227787.1| 50S ribosomal protein L4 [Mycobacterium intracellulare ATCC 13950]
Length=223
Score = 418 bits (1074), Expect = 3e-115, Method: Compositional matrix adjust.
Identities = 205/223 (92%), Positives = 213/223 (96%), Gaps = 0/223 (0%)
Query 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
MAAQ KTLKIDVKTPAGKV+G+IELPAELFD PANIALMHQVVTAQRAAARQGTHSTKT
Sbjct 1 MAAQGSKTLKIDVKTPAGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKT 60
Query 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
RG+VSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA
Sbjct 61 RGDVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
Query 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
LSDRARNGRIHA+TE+V GQ PSTKSARAFL +LTERKQVLVVIGRSDEAGAKSVRNLPG
Sbjct 121 LSDRARNGRIHAVTEIVAGQTPSTKSARAFLGTLTERKQVLVVIGRSDEAGAKSVRNLPG 180
Query 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
VHIL P QLNTYDVLR+DDVVFSVEALNAYI+ANT T EEVSA
Sbjct 181 VHILTPGQLNTYDVLRSDDVVFSVEALNAYISANTGTPEEVSA 223
>gi|118466008|ref|YP_883605.1| 50S ribosomal protein L4 [Mycobacterium avium 104]
gi|254776906|ref|ZP_05218422.1| 50S ribosomal protein L4 [Mycobacterium avium subsp. avium ATCC
25291]
gi|166234686|sp|A0QL17.1|RL4_MYCA1 RecName: Full=50S ribosomal protein L4
gi|118167295|gb|ABK68192.1| ribosomal protein L4/L1 family protein [Mycobacterium avium 104]
Length=217
Score = 407 bits (1047), Expect = 5e-112, Method: Compositional matrix adjust.
Identities = 200/215 (94%), Positives = 206/215 (96%), Gaps = 0/215 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DVK P GKV+G+IELPAELFD PANIALMHQVVTAQRAAARQGTHSTKTRG+VSGGG
Sbjct 3 LKLDVKAPGGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 62
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG
Sbjct 63 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 122
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIHAITELV GQ PSTKSA+AFL +LTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ
Sbjct 123 RIHAITELVSGQTPSTKSAKAFLGTLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 182
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
LNTYDVLRADDVVFSVEAL AYIAANT T EEVSA
Sbjct 183 LNTYDVLRADDVVFSVEALRAYIAANTGTPEEVSA 217
>gi|41410260|ref|NP_963096.1| 50S ribosomal protein L4 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|46577156|sp|P61066.1|RL4_MYCPA RecName: Full=50S ribosomal protein L4
gi|41399094|gb|AAS06712.1| RplD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460667|gb|EGO39558.1| 50S ribosomal protein L4, bacterial/organelle [Mycobacterium
avium subsp. paratuberculosis S397]
Length=217
Score = 407 bits (1046), Expect = 6e-112, Method: Compositional matrix adjust.
Identities = 200/215 (94%), Positives = 206/215 (96%), Gaps = 0/215 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DVK P GKV+G+IELPAELFD PANIALMHQVVTAQRAAARQGTHSTKTRG+VSGGG
Sbjct 3 LKLDVKAPGGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 62
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG
Sbjct 63 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 122
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIHAITELV GQ PSTKSA+AFL +LTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ
Sbjct 123 RIHAITELVSGQTPSTKSAKAFLGALTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 182
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
LNTYDVLRADDVVFSVEAL AYIAANT T EEVSA
Sbjct 183 LNTYDVLRADDVVFSVEALRAYIAANTGTPEEVSA 217
>gi|183981054|ref|YP_001849345.1| 50S ribosomal protein L4, RplD [Mycobacterium marinum M]
gi|226730696|sp|B2HSN2.1|RL4_MYCMM RecName: Full=50S ribosomal protein L4
gi|183174380|gb|ACC39490.1| 50S ribosomal protein L4, RplD [Mycobacterium marinum M]
Length=224
Score = 400 bits (1029), Expect = 6e-110, Method: Compositional matrix adjust.
Identities = 199/226 (89%), Positives = 210/226 (93%), Gaps = 5/226 (2%)
Query 1 MAAQEQ---KTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHS 57
MAAQ Q K L+I VKTP GKVDG++ LPAELFDVPANIALMHQVVTAQRAAARQGTHS
Sbjct 1 MAAQNQSAQKDLEIQVKTPDGKVDGSVALPAELFDVPANIALMHQVVTAQRAAARQGTHS 60
Query 58 TKTRGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAAL 117
TKTRG+VSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAAL
Sbjct 61 TKTRGDVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAAL 120
Query 118 RGALSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRN 177
RGALSDRARNGRIHA+TELV GQ PSTKSA+ FLA++T+RKQVLVVIGR D+ G KSVRN
Sbjct 121 RGALSDRARNGRIHAVTELVAGQTPSTKSAKTFLATITDRKQVLVVIGRDDQTGVKSVRN 180
Query 178 LPGVHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
LPGVHIL+PDQLNTYDVLRADDVVFSVEALNAYIAAN TSEEVSA
Sbjct 181 LPGVHILSPDQLNTYDVLRADDVVFSVEALNAYIAAN--TSEEVSA 224
>gi|296168558|ref|ZP_06850362.1| 50S ribosomal protein L4 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896621|gb|EFG76260.1| 50S ribosomal protein L4 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=217
Score = 399 bits (1025), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 192/215 (90%), Positives = 206/215 (96%), Gaps = 0/215 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LKIDVKTP GKV+G+IELPAELFD PANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG
Sbjct 3 LKIDVKTPDGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 62
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDY+QRTPKKMIAAALRGALSDRARNG
Sbjct 63 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYAQRTPKKMIAAALRGALSDRARNG 122
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIHA+TE+V GQ PSTK+ARAFL +LT+RK+VL+VIGRSDEAGAKSVRNLPGVHIL PDQ
Sbjct 123 RIHAVTEIVAGQTPSTKNARAFLGTLTDRKKVLIVIGRSDEAGAKSVRNLPGVHILTPDQ 182
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
LNTYDVL +DDVVFSVEALNAYIA NT ++EEV+A
Sbjct 183 LNTYDVLLSDDVVFSVEALNAYIAGNTASTEEVTA 217
>gi|342861792|ref|ZP_08718437.1| 50S ribosomal protein L4 [Mycobacterium colombiense CECT 3035]
gi|342130609|gb|EGT83913.1| 50S ribosomal protein L4 [Mycobacterium colombiense CECT 3035]
Length=226
Score = 398 bits (1022), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 193/213 (91%), Positives = 203/213 (96%), Gaps = 0/213 (0%)
Query 3 AQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRG 62
A+ KTLKIDVKTP GKV+G+IELPAELFD PANIALMHQVVTAQRAAARQGTHSTKTRG
Sbjct 2 AEGSKTLKIDVKTPGGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRG 61
Query 63 EVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALS 122
+VSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALS
Sbjct 62 DVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALS 121
Query 123 DRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVH 182
DRARNGRIHAITE+V GQ PSTKSA+AFL +LT+RKQVLVVIGRSDEAGAKSVRNLPGVH
Sbjct 122 DRARNGRIHAITEIVAGQTPSTKSAKAFLGTLTDRKQVLVVIGRSDEAGAKSVRNLPGVH 181
Query 183 ILAPDQLNTYDVLRADDVVFSVEALNAYIAANT 215
+L PDQLNTYDVLR+DDVVFSVEALNAYIA T
Sbjct 182 LLTPDQLNTYDVLRSDDVVFSVEALNAYIAGAT 214
>gi|240167704|ref|ZP_04746363.1| 50S ribosomal protein L4 [Mycobacterium kansasii ATCC 12478]
Length=225
Score = 397 bits (1021), Expect = 5e-109, Method: Compositional matrix adjust.
Identities = 195/221 (89%), Positives = 207/221 (94%), Gaps = 5/221 (2%)
Query 8 TLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGG 67
TLKIDVKTPAGKV+G+IELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRG+VSGG
Sbjct 5 TLKIDVKTPAGKVEGSIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGG 64
Query 68 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 127
GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN
Sbjct 65 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 124
Query 128 GRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPD 187
GRIHA+TELV GQ PSTKSA+ FLA+LT+RKQ+LVVIGR DE AKSVRNLPGVH+L+PD
Sbjct 125 GRIHAVTELVAGQTPSTKSAKTFLATLTDRKQLLVVIGRDDETAAKSVRNLPGVHVLSPD 184
Query 188 QLNTYDVLRADDVVFSVEALNAYIAANT-----TTSEEVSA 223
QLNTYDVLRADDVVFSV ALNAYI+A+T T EEVSA
Sbjct 185 QLNTYDVLRADDVVFSVAALNAYISASTANTGANTPEEVSA 225
>gi|118616572|ref|YP_904904.1| 50S ribosomal protein L4 [Mycobacterium ulcerans Agy99]
gi|166234692|sp|A0PM64.1|RL4_MYCUA RecName: Full=50S ribosomal protein L4
gi|118568682|gb|ABL03433.1| 50S ribosomal protein L4, RplD [Mycobacterium ulcerans Agy99]
Length=224
Score = 396 bits (1018), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 197/226 (88%), Positives = 208/226 (93%), Gaps = 5/226 (2%)
Query 1 MAAQEQ---KTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHS 57
MAAQ Q K L+I VK P GKVDG++ LPAELFDVPANIALMHQVVTAQRAAARQGTHS
Sbjct 1 MAAQNQSAQKDLEIQVKAPDGKVDGSVVLPAELFDVPANIALMHQVVTAQRAAARQGTHS 60
Query 58 TKTRGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAAL 117
TKTRG+VSGGGRKPYRQKGTGRARQGSTR PQFTGGGVVHGPKPRDYSQRTPKKMIAAAL
Sbjct 61 TKTRGDVSGGGRKPYRQKGTGRARQGSTRTPQFTGGGVVHGPKPRDYSQRTPKKMIAAAL 120
Query 118 RGALSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRN 177
RGALSDRARNGRIHA+TELV GQ PSTKSA+ FLA++T+RKQVLVVIGR D+ G KSVRN
Sbjct 121 RGALSDRARNGRIHAVTELVAGQTPSTKSAKTFLATITDRKQVLVVIGRDDQTGVKSVRN 180
Query 178 LPGVHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
LPGVHIL+PDQLNTYDVLRADDVVFSVEALNAYIAAN TSEEVSA
Sbjct 181 LPGVHILSPDQLNTYDVLRADDVVFSVEALNAYIAAN--TSEEVSA 224
>gi|333991977|ref|YP_004524591.1| 50S ribosomal protein L4 RplD [Mycobacterium sp. JDM601]
gi|333487945|gb|AEF37337.1| 50S ribosomal protein L4 RplD [Mycobacterium sp. JDM601]
Length=225
Score = 387 bits (995), Expect = 4e-106, Method: Compositional matrix adjust.
Identities = 186/220 (85%), Positives = 203/220 (93%), Gaps = 0/220 (0%)
Query 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
MAA+EQ LKIDVK+P GK G++ELPAELFD PANIALMHQVV AQ AAARQGTHSTKT
Sbjct 1 MAAKEQTALKIDVKSPDGKKSGSVELPAELFDAPANIALMHQVVIAQLAAARQGTHSTKT 60
Query 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
RGEV GGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA
Sbjct 61 RGEVRGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
Query 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
LSDRARNGRIHA+TELV GQ PSTKSA+AFL ++T+RKQVLV+IGR+DE GA+SVRNLPG
Sbjct 121 LSDRARNGRIHAVTELVSGQTPSTKSAKAFLGTITDRKQVLVIIGRADETGARSVRNLPG 180
Query 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
VHILAPDQLNT+DVLRADDVVFSVEALNAYI+ + ++E
Sbjct 181 VHILAPDQLNTHDVLRADDVVFSVEALNAYISGSAAHTQE 220
>gi|15828001|ref|NP_302264.1| 50S ribosomal protein L4 [Mycobacterium leprae TN]
gi|221230478|ref|YP_002503894.1| 50S ribosomal protein L4 [Mycobacterium leprae Br4923]
gi|3122749|sp|O32982.1|RL4_MYCLE RecName: Full=50S ribosomal protein L4
gi|254803747|sp|B8ZSB8.1|RL4_MYCLB RecName: Full=50S ribosomal protein L4
gi|2344834|emb|CAB11436.1| ribosomal protein L4 [Mycobacterium leprae]
gi|13093554|emb|CAC30816.1| 50S ribosomal protein L4 [Mycobacterium leprae]
gi|219933585|emb|CAR71958.1| 50S ribosomal protein L4 [Mycobacterium leprae Br4923]
Length=230
Score = 385 bits (989), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 189/218 (87%), Positives = 202/218 (93%), Gaps = 4/218 (1%)
Query 10 KIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGR 69
KIDVKTP GKVDG IELPAELFD PANIALMHQVVTAQRAAARQGTHSTKTRG+VSGGGR
Sbjct 13 KIDVKTPDGKVDGTIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGGR 72
Query 70 KPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGR 129
KPYRQKGTGRARQGS RAPQFTGGG+VHGPK RDYSQRTPKKMIAAALRGALSDRARNGR
Sbjct 73 KPYRQKGTGRARQGSMRAPQFTGGGIVHGPKLRDYSQRTPKKMIAAALRGALSDRARNGR 132
Query 130 IHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQL 189
IHA+TELV G+ PSTKSA+ FL +LT+RKQVLVVIGRSDE GAKSVRNLPGVH+L+PDQL
Sbjct 133 IHAVTELVVGKTPSTKSAKEFLGTLTDRKQVLVVIGRSDETGAKSVRNLPGVHLLSPDQL 192
Query 190 NTYDVLRADDVVFSVEALNAYIAAN----TTTSEEVSA 223
NTYDVLRADD+VFSVEALN+YIAA T+T E+VSA
Sbjct 193 NTYDVLRADDLVFSVEALNSYIAAQQAAGTSTPEKVSA 230
>gi|118470088|ref|YP_885820.1| 50S ribosomal protein L4 [Mycobacterium smegmatis str. MC2 155]
gi|166234688|sp|A0QSD2.1|RL4_MYCS2 RecName: Full=50S ribosomal protein L4
gi|118171375|gb|ABK72271.1| ribosomal protein L4/L1 family protein [Mycobacterium smegmatis
str. MC2 155]
Length=215
Score = 381 bits (979), Expect = 4e-104, Method: Compositional matrix adjust.
Identities = 181/208 (88%), Positives = 195/208 (94%), Gaps = 0/208 (0%)
Query 8 TLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGG 67
TLK+DVKTPAGK DG++ELPAELFDV NIALMHQVVTAQ AA RQGTHSTKTRGEVSGG
Sbjct 2 TLKVDVKTPAGKTDGSVELPAELFDVEPNIALMHQVVTAQLAAKRQGTHSTKTRGEVSGG 61
Query 68 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 127
G+KPYRQKGTGRARQGSTRAPQFTGGG VHGPKPRDYSQRTPKKMIAAALRGALSDRARN
Sbjct 62 GKKPYRQKGTGRARQGSTRAPQFTGGGTVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 121
Query 128 GRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPD 187
RIHA+TELVEGQ PSTKSA+ FL +LTE K+VLVVIGR+DE GAKSVRNLPGVH+++PD
Sbjct 122 DRIHAVTELVEGQTPSTKSAKTFLGTLTENKKVLVVIGRTDEVGAKSVRNLPGVHVISPD 181
Query 188 QLNTYDVLRADDVVFSVEALNAYIAANT 215
QLNTYDVL ADDVVFSVEALNAYI+AN+
Sbjct 182 QLNTYDVLNADDVVFSVEALNAYISANS 209
>gi|3122740|sp|O06114.1|RL4_MYCSM RecName: Full=50S ribosomal protein L4
gi|2113890|emb|CAA73669.1| ribosomal protein L4 [Mycobacterium smegmatis]
Length=215
Score = 380 bits (975), Expect = 9e-104, Method: Compositional matrix adjust.
Identities = 180/208 (87%), Positives = 195/208 (94%), Gaps = 0/208 (0%)
Query 8 TLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGG 67
TLK+DVKTPAGK DG++ELPAELFDV NIALMHQVVTAQ AA RQGTHSTKTRGEVSGG
Sbjct 2 TLKVDVKTPAGKTDGSVELPAELFDVEPNIALMHQVVTAQLAAKRQGTHSTKTRGEVSGG 61
Query 68 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 127
G+KPYRQKG+GRARQGSTRAPQFTGGG VHGPKPRDYSQRTPKKMIAAALRGALSDRARN
Sbjct 62 GKKPYRQKGSGRARQGSTRAPQFTGGGTVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 121
Query 128 GRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPD 187
RIHA+TELVEGQ PSTKSA+ FL +LTE K+VLVVIGR+DE GAKSVRNLPGVH+++PD
Sbjct 122 DRIHAVTELVEGQTPSTKSAKTFLGTLTENKKVLVVIGRTDEVGAKSVRNLPGVHVISPD 181
Query 188 QLNTYDVLRADDVVFSVEALNAYIAANT 215
QLNTYDVL ADDVVFSVEALNAYI+AN+
Sbjct 182 QLNTYDVLNADDVVFSVEALNAYISANS 209
>gi|108797987|ref|YP_638184.1| 50S ribosomal protein L4 [Mycobacterium sp. MCS]
gi|119867083|ref|YP_937035.1| 50S ribosomal protein L4 [Mycobacterium sp. KMS]
gi|126433649|ref|YP_001069340.1| 50S ribosomal protein L4 [Mycobacterium sp. JLS]
6 more sequence titles
Length=219
Score = 378 bits (971), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 181/213 (85%), Positives = 197/213 (93%), Gaps = 0/213 (0%)
Query 11 IDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRK 70
I+VKTPAG DG++ELPAELFDV ANIALMHQVVTAQ AA RQGTHSTKTRGEVSGGG+K
Sbjct 5 IEVKTPAGTTDGSVELPAELFDVEANIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKK 64
Query 71 PYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRI 130
PYRQKGTGRARQGSTRAPQFTGGG VHGP+PRDYSQRTPKKMIAAALRGALSDRARNGRI
Sbjct 65 PYRQKGTGRARQGSTRAPQFTGGGTVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRI 124
Query 131 HAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQLN 190
HA+TELVEGQ PSTKSA+AFL++LTERKQVLVVIGR+DE +SVRNLPGVHI++PDQLN
Sbjct 125 HAVTELVEGQTPSTKSAKAFLSTLTERKQVLVVIGRADETSERSVRNLPGVHIISPDQLN 184
Query 191 TYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
TYDVL+ADDVVFSVEALNAYI A T +E+ A
Sbjct 185 TYDVLKADDVVFSVEALNAYINAQTARTEKEGA 217
>gi|120402317|ref|YP_952146.1| 50S ribosomal protein L4 [Mycobacterium vanbaalenii PYR-1]
gi|119955135|gb|ABM12140.1| LSU ribosomal protein L4P [Mycobacterium vanbaalenii PYR-1]
Length=219
Score = 378 bits (970), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 184/214 (86%), Positives = 200/214 (94%), Gaps = 1/214 (0%)
Query 10 KIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGR 69
KI V+TPAGK DG+IELPAELFDV NIALMHQVV AQ AA RQGTHSTKTRGEVSGGG+
Sbjct 7 KIPVRTPAGKTDGSIELPAELFDVEPNIALMHQVVNAQLAAKRQGTHSTKTRGEVSGGGK 66
Query 70 KPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGR 129
KPYRQKGTGRARQGSTRAPQFTGGG+VHGPKPRDYS+RTPKKMI AALRGALSDRARN R
Sbjct 67 KPYRQKGTGRARQGSTRAPQFTGGGIVHGPKPRDYSERTPKKMIRAALRGALSDRARNDR 126
Query 130 IHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQL 189
IHAITE+VEGQ PSTKSA++FLA+LT+R+QVLVVIGR+DEA A SVRNLPGVH+++PDQL
Sbjct 127 IHAITEIVEGQTPSTKSAKSFLATLTDRRQVLVVIGRADEASALSVRNLPGVHVISPDQL 186
Query 190 NTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
NTYDVL+ADDVVFSVEALNAYIAANT T EEVSA
Sbjct 187 NTYDVLKADDVVFSVEALNAYIAANTKT-EEVSA 219
>gi|145225624|ref|YP_001136302.1| 50S ribosomal protein L4 [Mycobacterium gilvum PYR-GCK]
gi|315445977|ref|YP_004078856.1| 50S ribosomal protein L4P [Mycobacterium sp. Spyr1]
gi|145218110|gb|ABP47514.1| LSU ribosomal protein L4P [Mycobacterium gilvum PYR-GCK]
gi|315264280|gb|ADU01022.1| LSU ribosomal protein L4P [Mycobacterium sp. Spyr1]
Length=218
Score = 371 bits (952), Expect = 5e-101, Method: Compositional matrix adjust.
Identities = 180/213 (85%), Positives = 195/213 (92%), Gaps = 0/213 (0%)
Query 11 IDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRK 70
IDV TPAGK DG +ELPA LFD NIALMHQVVTAQ AA RQGTH+TKTR VSGGG+K
Sbjct 6 IDVVTPAGKKDGTVELPAALFDAEPNIALMHQVVTAQLAAKRQGTHATKTRAMVSGGGKK 65
Query 71 PYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRI 130
PYRQKGTGRARQGSTRAPQFTGGGVVHGP+PRDYSQRTPKKMIAAALR ALSDRARN RI
Sbjct 66 PYRQKGTGRARQGSTRAPQFTGGGVVHGPQPRDYSQRTPKKMIAAALRSALSDRARNDRI 125
Query 131 HAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQLN 190
HAITE+VEGQ+PSTKSA+AFLA+LT+RKQVLVVIGR+DE A SVRNLPGVH+++PDQLN
Sbjct 126 HAITEVVEGQSPSTKSAKAFLATLTDRKQVLVVIGRADETSALSVRNLPGVHVISPDQLN 185
Query 191 TYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
TYDVL+ADDVVFSVEALNAYIAA T T+EEVSA
Sbjct 186 TYDVLKADDVVFSVEALNAYIAAATKTTEEVSA 218
>gi|169630899|ref|YP_001704548.1| 50S ribosomal protein L4 [Mycobacterium abscessus ATCC 19977]
gi|169242866|emb|CAM63894.1| 50S ribosomal protein L4 [Mycobacterium abscessus]
Length=213
Score = 358 bits (919), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 174/215 (81%), Positives = 190/215 (89%), Gaps = 2/215 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
+KI VK P GK DG+IELPAELFD PANIAL+HQVVTAQ AA RQGTHSTKTRG VSGGG
Sbjct 1 MKIAVKAPGGKTDGSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGG 60
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
+KPYRQKGTGRARQGSTRAPQFTGGG+VHGP+PRDYSQRTPKKMIAAALRGALSDRARNG
Sbjct 61 KKPYRQKGTGRARQGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNG 120
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIHA+TELV GQ PSTKSA++FL +T+RKQ+LVV+GR D A KSVRNLP VH+LA DQ
Sbjct 121 RIHAVTELVAGQEPSTKSAKSFLGEITDRKQLLVVLGRDDLASVKSVRNLPNVHVLAYDQ 180
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEEVSA 223
LNTYDVL+ADDVVFSVEALN +I N EEVSA
Sbjct 181 LNTYDVLKADDVVFSVEALNGFI--NAKKKEEVSA 213
>gi|209165347|gb|ACI41235.1| ribosomal protein L4 [Mycobacterium massiliense]
Length=199
Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 165/196 (85%), Positives = 180/196 (92%), Gaps = 0/196 (0%)
Query 18 GKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGT 77
GK DG+IELPAELFD PANIAL+HQVVTAQ AA RQGTHSTKTRG VSGGG+KPYRQKGT
Sbjct 1 GKTDGSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGT 60
Query 78 GRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELV 137
GRARQGSTRAPQFTGGG+VHGP+PRDYSQRTPKKMIAAALRGALSDRARNGRIHA+TELV
Sbjct 61 GRARQGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELV 120
Query 138 EGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQLNTYDVLRA 197
GQ PSTKSA++FLA +T+RKQ+LVV+GR D A KSVRNLP VH+LA DQLNTYDVL+A
Sbjct 121 AGQEPSTKSAKSFLAEITDRKQLLVVLGRDDLASVKSVRNLPNVHVLAYDQLNTYDVLKA 180
Query 198 DDVVFSVEALNAYIAA 213
DDVVFSVEALN +I A
Sbjct 181 DDVVFSVEALNGFINA 196
>gi|209165345|gb|ACI41234.1| ribosomal protein L4 [Mycobacterium bolletii]
gi|209165349|gb|ACI41236.1| ribosomal protein L4 [Mycobacterium abscessus]
Length=199
Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/196 (84%), Positives = 179/196 (92%), Gaps = 0/196 (0%)
Query 18 GKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGT 77
GK DG+IELPAELFD PANIAL+HQVVTAQ AA RQGTHSTKTRG VSGGG+KPYRQKGT
Sbjct 1 GKTDGSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGT 60
Query 78 GRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELV 137
GRARQGSTRAPQFTGGG+VHGP+PRDYSQRTPKKMIAAALRGALSDRARNGRIHA+TELV
Sbjct 61 GRARQGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELV 120
Query 138 EGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQLNTYDVLRA 197
GQ PSTKSA++FL +T+RKQ+LVV+GR D A KSVRNLP VH+LA DQLNTYDVL+A
Sbjct 121 AGQEPSTKSAKSFLGEITDRKQLLVVLGRDDLASVKSVRNLPNVHVLAYDQLNTYDVLKA 180
Query 198 DDVVFSVEALNAYIAA 213
DDVVFSVEALN +I A
Sbjct 181 DDVVFSVEALNGFINA 196
>gi|209165351|gb|ACI41237.1| ribosomal protein L4 [Mycobacterium chelonae]
Length=199
Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/195 (85%), Positives = 178/195 (92%), Gaps = 0/195 (0%)
Query 19 KVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGTG 78
K DG+IELPAELFD PANIAL+HQVVTAQ AA RQGTHSTKTRG VSGGG+KPYRQKGTG
Sbjct 2 KTDGSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTG 61
Query 79 RARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVE 138
RARQGSTRAPQFTGGG+VHGP+PRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELV
Sbjct 62 RARQGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVA 121
Query 139 GQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQLNTYDVLRAD 198
GQ PSTKSA++FLA +++RKQVLVV+GR D KSVRNLP VH+LA DQLNTYDVL+AD
Sbjct 122 GQEPSTKSAKSFLAEISDRKQVLVVLGRDDLTSVKSVRNLPNVHVLAYDQLNTYDVLKAD 181
Query 199 DVVFSVEALNAYIAA 213
DVVFSVEALN +I A
Sbjct 182 DVVFSVEALNGFINA 196
>gi|226365596|ref|YP_002783379.1| 50S ribosomal protein L4 [Rhodococcus opacus B4]
gi|226244086|dbj|BAH54434.1| 50S ribosomal protein L4 [Rhodococcus opacus B4]
Length=229
Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 163/222 (74%), Positives = 185/222 (84%), Gaps = 2/222 (0%)
Query 1 MAAQEQKT--LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHST 58
M + E T L +DVK GK +G +ELPAE+FD PANIAL+HQVV AQ AAARQGTH+T
Sbjct 1 MTSTETSTTKLTLDVKVAGGKTNGTVELPAEIFDAPANIALLHQVVVAQLAAARQGTHAT 60
Query 59 KTRGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALR 118
KTRGEV GGG+KPYRQKGTGRARQGSTRAPQF GGG VHGP+PRDYSQRTPKKM AAALR
Sbjct 61 KTRGEVRGGGKKPYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALR 120
Query 119 GALSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNL 178
GALSDRARN RIH ITELV GQ PSTKSAR FL +++RK+VL+V+GR+D A KSV+NL
Sbjct 121 GALSDRARNERIHVITELVAGQTPSTKSARTFLGEISDRKKVLLVVGRADIAAWKSVQNL 180
Query 179 PGVHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
GVH +APDQLNTYDVL +DDVVFSVEALNA+I T++E
Sbjct 181 EGVHPIAPDQLNTYDVLNSDDVVFSVEALNAFIHGPAETAQE 222
>gi|111023097|ref|YP_706069.1| 50S ribosomal protein L4 [Rhodococcus jostii RHA1]
gi|110822627|gb|ABG97911.1| 50S ribosomal protein L4 [Rhodococcus jostii RHA1]
Length=229
Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 161/222 (73%), Positives = 184/222 (83%), Gaps = 2/222 (0%)
Query 1 MAAQEQKT--LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHST 58
M + E T L +DVK GK +G ++LPAE+FD PANIAL+HQVV AQ AAARQGTH+T
Sbjct 1 MTSTETSTTKLTLDVKVAGGKTNGTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHAT 60
Query 59 KTRGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALR 118
KTRGEV GGG+KPYRQKGTGRARQGSTRAPQF GGG VHGP+PRDYSQRTPKKM AAALR
Sbjct 61 KTRGEVRGGGKKPYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALR 120
Query 119 GALSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNL 178
GALSDRARN RIH ITELV GQ PSTKSAR FL +++RK+VL+V+GR D A KSV+NL
Sbjct 121 GALSDRARNERIHVITELVAGQTPSTKSARTFLGEISDRKKVLLVVGREDIAAWKSVQNL 180
Query 179 PGVHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
GVH +APDQLNTYDVL +DDVVFSVEALN++I T++E
Sbjct 181 DGVHPIAPDQLNTYDVLNSDDVVFSVEALNSFIHGPAETAQE 222
>gi|226305342|ref|YP_002765300.1| 50S ribosomal protein L4 [Rhodococcus erythropolis PR4]
gi|229489366|ref|ZP_04383229.1| ribosomal protein L4/L1 family protein [Rhodococcus erythropolis
SK121]
gi|226184457|dbj|BAH32561.1| 50S ribosomal protein L4 [Rhodococcus erythropolis PR4]
gi|229323463|gb|EEN89221.1| ribosomal protein L4/L1 family protein [Rhodococcus erythropolis
SK121]
Length=224
Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 159/211 (76%), Positives = 179/211 (85%), Gaps = 1/211 (0%)
Query 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
M + E K L +DVK GK +G ++LPAE+FD PANIAL+HQVV AQ AAARQGTHSTKT
Sbjct 1 MTSTETK-LTLDVKVAGGKTNGTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHSTKT 59
Query 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
RG+V GGG+KPYRQKGTGRARQGSTRAPQF GGG VHGP+PRDYSQRTPKKM AAALRGA
Sbjct 60 RGDVRGGGKKPYRQKGTGRARQGSTRAPQFVGGGTVHGPQPRDYSQRTPKKMKAAALRGA 119
Query 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
LSDRARN RIH ITELV GQ PSTK A AFL +++RK++L+V+GR D A KSV+NL G
Sbjct 120 LSDRARNERIHVITELVAGQTPSTKGAIAFLGEISDRKKLLLVVGRQDVAAWKSVQNLEG 179
Query 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYI 211
VH +APDQLNTYDVL ADDVVFSVEALNA+I
Sbjct 180 VHPIAPDQLNTYDVLNADDVVFSVEALNAFI 210
>gi|312140917|ref|YP_004008253.1| 50S ribosomal protein l4 rpld [Rhodococcus equi 103S]
gi|325675445|ref|ZP_08155129.1| 50S ribosomal protein L4 [Rhodococcus equi ATCC 33707]
gi|311890256|emb|CBH49574.1| 50S ribosomal protein L4 RplD [Rhodococcus equi 103S]
gi|325553416|gb|EGD23094.1| 50S ribosomal protein L4 [Rhodococcus equi ATCC 33707]
Length=221
Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/212 (74%), Positives = 177/212 (84%), Gaps = 0/212 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
L +DVK GK +G ++LP+E+FD ANIALMHQVV AQ AAARQGTHSTKTRGEV GGG
Sbjct 8 LTLDVKAAGGKTNGTVDLPSEIFDATANIALMHQVVVAQLAAARQGTHSTKTRGEVRGGG 67
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
+KPYRQKGTGRARQGSTRAPQF GGG VHGP+PRDYSQRTPKKM AAALRGALSDRARN
Sbjct 68 KKPYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNE 127
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH ITELV GQ PSTK+A++FL L++RK+ L+V+GR D A KSV+NL GVH +APDQ
Sbjct 128 RIHVITELVAGQVPSTKTAKSFLGELSDRKKFLLVVGREDIAAWKSVQNLDGVHPIAPDQ 187
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
LNTYDVL +DDVVFS+EALN +IA EE
Sbjct 188 LNTYDVLNSDDVVFSLEALNTFIAGPAKNEEE 219
>gi|54022701|ref|YP_116943.1| 50S ribosomal protein L4 [Nocardia farcinica IFM 10152]
gi|81603036|sp|Q5Z1W2.1|RL4_NOCFA RecName: Full=50S ribosomal protein L4
gi|54014209|dbj|BAD55579.1| putative ribosomal protein L4 [Nocardia farcinica IFM 10152]
Length=230
Score = 324 bits (830), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 157/219 (72%), Positives = 181/219 (83%), Gaps = 0/219 (0%)
Query 4 QEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGE 63
+++ L + VK GK +G +ELPAE+FDV ANIALMHQVVTAQ AAARQGTH+TKTRGE
Sbjct 11 EKKANLVLPVKEAGGKSNGTVELPAEIFDVTANIALMHQVVTAQLAAARQGTHATKTRGE 70
Query 64 VSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSD 123
VSGGG+KPYRQKGTGRARQGSTRAPQFTGGG VHGP+PRDYSQRTPKKMI AAL GALSD
Sbjct 71 VSGGGKKPYRQKGTGRARQGSTRAPQFTGGGTVHGPQPRDYSQRTPKKMIRAALHGALSD 130
Query 124 RARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHI 183
RARN RIH ++ELV GQ PSTK+A+ FLA L++RK+ LVV+GR D KSV NL V
Sbjct 131 RARNDRIHVVSELVAGQTPSTKTAKNFLAELSDRKKFLVVVGREDVTAWKSVANLQNVQP 190
Query 184 LAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEEVS 222
+APDQLNTYDVL +DDVVFSVEALNA++ T ++E S
Sbjct 191 IAPDQLNTYDVLNSDDVVFSVEALNAFVHGPTEAAQEES 229
>gi|337290016|ref|YP_004629037.1| 50S ribosomal protein L4 [Corynebacterium ulcerans BR-AD22]
gi|334696139|gb|AEG80936.1| 50S ribosomal protein L4 [Corynebacterium ulcerans 809]
gi|334698322|gb|AEG83118.1| 50S ribosomal protein L4 [Corynebacterium ulcerans BR-AD22]
Length=217
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/212 (74%), Positives = 175/212 (83%), Gaps = 0/212 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV T GK DG +ELPAE+FD A++ALMHQVV AQ AA RQGTHSTKTR EVSGGG
Sbjct 4 LKLDVLTAEGKTDGQVELPAEIFDREASVALMHQVVNAQLAAKRQGTHSTKTRAEVSGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP FTGGG+ HGPKPRDYSQRTPKKMI AAL GALSDRAR+
Sbjct 64 RKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYSQRTPKKMIKAALYGALSDRARHE 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH ITELV GQ PSTKSARAF+ +T+R+ VL+V+GR D KS RNLPGVHIL DQ
Sbjct 124 RIHVITELVAGQTPSTKSARAFVERITDRRNVLLVVGREDTTAQKSARNLPGVHILFADQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
LNTYDVL++DDVVFSVEALN +I T ++E
Sbjct 184 LNTYDVLKSDDVVFSVEALNTFINRVTGAAQE 215
>gi|300857763|ref|YP_003782746.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685217|gb|ADK28139.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205501|gb|ADL09843.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
C231]
gi|302330056|gb|ADL20250.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
1002]
gi|308275737|gb|ADO25636.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
I19]
Length=217
Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/212 (74%), Positives = 175/212 (83%), Gaps = 0/212 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV T GK DG +ELPAE+FD A++ALMHQVV AQ AA RQGTHSTKTR EVSGGG
Sbjct 4 LKLDVLTAEGKTDGQVELPAEIFDREASVALMHQVVNAQLAAKRQGTHSTKTRAEVSGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP FTGGG+ HGPKPRDYSQRTPKKMI AAL GALSDRAR+
Sbjct 64 RKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYSQRTPKKMIKAALYGALSDRARHE 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH ITELV GQ PSTKSARAF+ +T+R+ VL+V+GR D KS RNLPGVHIL DQ
Sbjct 124 RIHVITELVPGQTPSTKSARAFVERITDRRNVLLVVGREDTTAQKSARNLPGVHILFADQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
LNTYDVL++DDVVFSVEALN +I T ++E
Sbjct 184 LNTYDVLKSDDVVFSVEALNTFINRVTGAAQE 215
>gi|333918148|ref|YP_004491729.1| 50S ribosomal protein L4 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480369|gb|AEF38929.1| 50S ribosomal protein L4 [Amycolicicoccus subflavus DQS3-9A1]
Length=232
Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 149/210 (71%), Positives = 175/210 (84%), Gaps = 0/210 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
L++DV+TP G +G ++LPAE+FD P N+ALMHQVV AQ AAARQGTHSTKTR EVSGGG
Sbjct 13 LQLDVRTPEGGTNGTVDLPAEIFDAPVNVALMHQVVVAQLAAARQGTHSTKTRAEVSGGG 72
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
+KPYRQKGTGRARQGSTRAPQF GGG VHGPKPRDYSQRTPKKMIA ALR ALSDRAR+
Sbjct 73 KKPYRQKGTGRARQGSTRAPQFVGGGTVHGPKPRDYSQRTPKKMIAGALRSALSDRARSE 132
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH ITE+V GQ PSTK+A+ F A +++R + L+V+GR D A SV NL VH +APDQ
Sbjct 133 RIHVITEVVAGQEPSTKAAKTFFAQISDRNKFLLVVGREDLAAWLSVSNLDNVHPIAPDQ 192
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTS 218
LNTYDVL +DD+VF+VEAL+++IAA T S
Sbjct 193 LNTYDVLDSDDLVFTVEALDSFIAARTAKS 222
>gi|19551747|ref|NP_599749.1| 50S ribosomal protein L4 [Corynebacterium glutamicum ATCC 13032]
gi|62389402|ref|YP_224804.1| 50S ribosomal protein L4 [Corynebacterium glutamicum ATCC 13032]
gi|145294658|ref|YP_001137479.1| 50S ribosomal protein L4 [Corynebacterium glutamicum R]
6 more sequence titles
Length=218
Score = 318 bits (814), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 150/204 (74%), Positives = 172/204 (85%), Gaps = 0/204 (0%)
Query 8 TLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGG 67
LK+DV+T G ++G++ELPAE+FD ++AL+HQVV AQ AAARQGTHSTKTRGEV GG
Sbjct 3 NLKLDVQTADGNINGSVELPAEIFDREVSVALLHQVVNAQLAAARQGTHSTKTRGEVRGG 62
Query 68 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 127
GRKP+RQKGTGRARQGS RAP FTGGG+ HGPKPRDYSQRTPKKMI AAL GALSDRARN
Sbjct 63 GRKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYSQRTPKKMIKAALYGALSDRARN 122
Query 128 GRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPD 187
RIH ++ELV GQ PSTKSA+AF+ LTERK VL+V+ R D KS NLPGVHILA D
Sbjct 123 ARIHVVSELVPGQTPSTKSAKAFIERLTERKSVLLVVSREDINAQKSANNLPGVHILAAD 182
Query 188 QLNTYDVLRADDVVFSVEALNAYI 211
QLNTYDVL++DDVVFSVEAL+ +I
Sbjct 183 QLNTYDVLKSDDVVFSVEALHTFI 206
>gi|336326438|ref|YP_004606404.1| 50S ribosomal protein L4 [Corynebacterium resistens DSM 45100]
gi|336102420|gb|AEI10240.1| 50S ribosomal protein L4 [Corynebacterium resistens DSM 45100]
Length=217
Score = 318 bits (814), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/212 (73%), Positives = 172/212 (82%), Gaps = 0/212 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV T GK +G++ELPA +FD ++ALMHQVVTAQ AA RQGTH+TK RG+V GGG
Sbjct 4 LKLDVHTADGKTNGSVELPASIFDAEVSVALMHQVVTAQLAAKRQGTHATKARGDVRGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP FTGGG VHGP+PRDYSQRTPKKM AAALRGAL+DRAR+
Sbjct 64 RKPWRQKGTGRARQGSIRAPHFTGGGTVHGPQPRDYSQRTPKKMKAAALRGALTDRARHA 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH + +LV GQ PSTKSAR FL LT+RK VLVV+GR D KSVRNLP VH L DQ
Sbjct 124 RIHVVEDLVPGQTPSTKSARGFLERLTDRKSVLVVLGREDINSRKSVRNLPNVHTLVSDQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
LNTYDVL ADDVVFSVEALNA+I A T EE
Sbjct 184 LNTYDVLNADDVVFSVEALNAFINAAQNTKEE 215
>gi|260579266|ref|ZP_05847150.1| 50S ribosomal protein L4 [Corynebacterium jeikeium ATCC 43734]
gi|258602618|gb|EEW15911.1| 50S ribosomal protein L4 [Corynebacterium jeikeium ATCC 43734]
Length=217
Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/212 (73%), Positives = 171/212 (81%), Gaps = 0/212 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV T GK +G +ELPA +FD A++ALMHQVVTAQ AA RQGTH+TKTRG+VSGGG
Sbjct 4 LKLDVHTADGKTNGTVELPASIFDAEASVALMHQVVTAQLAAKRQGTHATKTRGQVSGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP FTGGG VHGP+PRDYSQRTPKKM AAALRGAL+DR R+
Sbjct 64 RKPFRQKGTGRARQGSIRAPHFTGGGTVHGPQPRDYSQRTPKKMKAAALRGALTDRVRHN 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH + ELV GQ PSTK+AR F+ LT+RK VLVV+ R D KSV NLP VH L DQ
Sbjct 124 RIHVVEELVPGQTPSTKAARTFIERLTDRKSVLVVLTREDVTAWKSVNNLPQVHTLVNDQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
LNTYDVL ADDVVFSVEALNA+I A T EE
Sbjct 184 LNTYDVLNADDVVFSVEALNAFINAADKTKEE 215
>gi|68536922|ref|YP_251627.1| 50S ribosomal protein L4 [Corynebacterium jeikeium K411]
gi|109893588|sp|Q4JT48.1|RL4_CORJK RecName: Full=50S ribosomal protein L4
gi|68264521|emb|CAI38009.1| 50S ribosomal protein L4 [Corynebacterium jeikeium K411]
Length=217
Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/212 (73%), Positives = 171/212 (81%), Gaps = 0/212 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV T GK +G +ELPA +FD A++ALMHQVVTAQ AA RQGTH+TKTRG VSGGG
Sbjct 4 LKLDVHTADGKTNGTVELPASIFDAEASVALMHQVVTAQLAAKRQGTHATKTRGMVSGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP FTGGG VHGP+PRDYSQRTPKKM AAALRGAL+DR R+
Sbjct 64 RKPFRQKGTGRARQGSIRAPHFTGGGTVHGPQPRDYSQRTPKKMKAAALRGALTDRVRHD 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH + ELV GQ PSTK+ARAF+ LT+RK VLVV+ R D KSV NLP VH L DQ
Sbjct 124 RIHVVEELVPGQTPSTKAARAFIERLTDRKSVLVVLTREDVTAWKSVNNLPQVHTLVNDQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
LNTYDVL ADDVVFSVEALNA+I A T EE
Sbjct 184 LNTYDVLNADDVVFSVEALNAFINAADKTKEE 215
>gi|319948722|ref|ZP_08022843.1| 50S ribosomal protein L4 [Dietzia cinnamea P4]
gi|319437624|gb|EFV92623.1| 50S ribosomal protein L4 [Dietzia cinnamea P4]
Length=229
Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/203 (74%), Positives = 171/203 (85%), Gaps = 0/203 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV+TPAG DG++ELPAE+F V N+ LMHQVV AQ AAARQGTHSTKTRGEVSGGG
Sbjct 10 LKLDVRTPAGSTDGSVELPAEIFGVEPNLPLMHQVVVAQLAAARQGTHSTKTRGEVSGGG 69
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGSTRAP +TGGG VHGPKPRDYSQRTPKKM AAALRGALSDRA +
Sbjct 70 RKPFRQKGTGRARQGSTRAPAYTGGGTVHGPKPRDYSQRTPKKMKAAALRGALSDRAASE 129
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH +TE VEGQ PST R FL +L++RK+ L+V+GR D A +S NL VH +APDQ
Sbjct 130 RIHVVTEFVEGQKPSTSGVRDFLGTLSDRKKFLIVVGREDLAAWRSAANLDHVHPIAPDQ 189
Query 189 LNTYDVLRADDVVFSVEALNAYI 211
LNTYDVL ADDVVFSVEAL+A++
Sbjct 190 LNTYDVLNADDVVFSVEALDAFV 212
>gi|262203623|ref|YP_003274831.1| 50S ribosomal protein L4/L1e [Gordonia bronchialis DSM 43247]
gi|262086970|gb|ACY22938.1| ribosomal protein L4/L1e [Gordonia bronchialis DSM 43247]
Length=221
Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/220 (75%), Positives = 183/220 (84%), Gaps = 0/220 (0%)
Query 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
M+ L +DVKT GK +G ++LPAELFD PANIALMHQVV AQ+AAARQGTH+TKT
Sbjct 1 MSTDAATKLTLDVKTADGKTNGTVDLPAELFDAPANIALMHQVVVAQQAAARQGTHATKT 60
Query 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
RG+V GGG KPYRQKGTGRARQGSTRAPQFTGGG VHGP+PRDYSQRTPKKM AAALRGA
Sbjct 61 RGDVRGGGAKPYRQKGTGRARQGSTRAPQFTGGGTVHGPQPRDYSQRTPKKMKAAALRGA 120
Query 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
LSDRARN RIH ITELV GQ PSTKSAR FL SL++R++ LVV+GR D KSV NL
Sbjct 121 LSDRARNERIHVITELVSGQVPSTKSARQFLESLSDRRKFLVVLGREDLTAWKSVANLGN 180
Query 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
V +APDQLNTYDVL +D+VVFSVE LNA+IAANTT ++E
Sbjct 181 VLPIAPDQLNTYDVLYSDEVVFSVETLNAFIAANTTDAKE 220
>gi|213965010|ref|ZP_03393209.1| ribosomal protein L4/L1 family protein [Corynebacterium amycolatum
SK46]
gi|213952546|gb|EEB63929.1| ribosomal protein L4/L1 family protein [Corynebacterium amycolatum
SK46]
Length=215
Score = 314 bits (804), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 150/203 (74%), Positives = 170/203 (84%), Gaps = 0/203 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV T G V+G++ELPA +FD +IALMHQVV AQRAAARQGTH KTRGEV GGG
Sbjct 4 LKLDVHTAEGGVNGSVELPASVFDAEVSIALMHQVVVAQRAAARQGTHKVKTRGEVRGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP +TGGG+VHGP PRDYSQRTPKKMIAAALRGALSDRAR+
Sbjct 64 RKPWRQKGTGRARQGSIRAPHWTGGGIVHGPVPRDYSQRTPKKMIAAALRGALSDRARHD 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH + ELV GQ PSTK+AR F+ LTER VLVV+ R D KSVRNLPGVHIL+ DQ
Sbjct 124 RIHVVEELVPGQTPSTKAARTFVERLTERHNVLVVLPREDVNSWKSVRNLPGVHILSEDQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYI 211
LNTYDVL+ADDV+F+V+ALN +I
Sbjct 184 LNTYDVLKADDVIFAVQALNDFI 206
>gi|296392586|ref|YP_003657470.1| 50S ribosomal protein L4/L1e [Segniliparus rotundus DSM 44985]
gi|296179733|gb|ADG96639.1| ribosomal protein L4/L1e [Segniliparus rotundus DSM 44985]
Length=218
Score = 313 bits (803), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 149/213 (70%), Positives = 172/213 (81%), Gaps = 0/213 (0%)
Query 8 TLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGG 67
+L + + GK G +LPAE+FD PANI+L+HQVVTAQ AAARQGTH KTRGEVSGG
Sbjct 2 SLTVTIHAADGKSAGTFDLPAEIFDAPANISLLHQVVTAQLAAARQGTHKVKTRGEVSGG 61
Query 68 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 127
GRKPY+QKGTGRARQGSTRAP FTGGG VHGP PRDYSQRTPKKM AAALRGALSDRAR
Sbjct 62 GRKPYKQKGTGRARQGSTRAPHFTGGGTVHGPVPRDYSQRTPKKMKAAALRGALSDRARG 121
Query 128 GRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPD 187
GR+H + ELV GQ+PSTK A AFL S+ R ++LVV+GR+DE G KSVRNLP HIL PD
Sbjct 122 GRVHIVDELVAGQSPSTKKASAFLDSIASRPRLLVVLGRADETGLKSVRNLPHAHILTPD 181
Query 188 QLNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
QLNTYDVL++DD+VFS+EAL +I + +E
Sbjct 182 QLNTYDVLKSDDIVFSLEALTTFIEHHKVNKKE 214
>gi|227541711|ref|ZP_03971760.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227182526|gb|EEI63498.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51866]
Length=226
Score = 313 bits (803), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 148/210 (71%), Positives = 173/210 (83%), Gaps = 0/210 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
L +DV T GK DG +ELPAELFD ++AL+HQVV AQ A ARQGTHSTKTRGEVSGGG
Sbjct 4 LVLDVHTADGKTDGTVELPAELFDRKVSVALLHQVVNAQLAGARQGTHSTKTRGEVSGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
+KP+RQKGTGRARQGS RAP FTGGG+ HGPKPRDYSQRTPKKM AAAL GALS+RAR G
Sbjct 64 KKPFRQKGTGRARQGSIRAPHFTGGGIAHGPKPRDYSQRTPKKMKAAALLGALSNRARTG 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIHAITE+V GQNPSTK+AR FL S+T+RK VLVV+GR D+ SVRNLPGV P+Q
Sbjct 124 RIHAITEVVAGQNPSTKAARTFLESITDRKNVLVVVGREDQTSRLSVRNLPGVRFCGPEQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTS 218
+ T+DVL+ADDV+FSVE+L+ +I + +S
Sbjct 184 ITTFDVLKADDVIFSVESLHKFIELKSKSS 213
>gi|38233086|ref|NP_938853.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae NCTC 13129]
gi|46577152|sp|P61062.1|RL4_CORDI RecName: Full=50S ribosomal protein L4
gi|38199345|emb|CAE48978.1| 50S ribosomal protein L4 [Corynebacterium diphtheriae]
Length=217
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/203 (74%), Positives = 169/203 (84%), Gaps = 0/203 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV T GK DG +ELPAE+FD A++AL+HQVV AQ AA RQGTHS KTR EVSGGG
Sbjct 4 LKLDVLTAEGKTDGQVELPAEIFDREASVALLHQVVNAQLAAKRQGTHSAKTRAEVSGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP FTGGG+ HGPKPRDYSQRTPKKMI AAL GAL+DRAR+
Sbjct 64 RKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYSQRTPKKMIKAALFGALTDRARHE 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH I+ELV GQ PSTKSAR+F+ +T+R+ VL+V+GR D KS RNLPGVHIL DQ
Sbjct 124 RIHVISELVAGQTPSTKSARSFIERITDRRNVLLVVGREDVTAQKSARNLPGVHILFADQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYI 211
LNTYDVL +DDVVFSVEALN +I
Sbjct 184 LNTYDVLYSDDVVFSVEALNTFI 206
>gi|227487122|ref|ZP_03917438.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092780|gb|EEI28092.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51867]
Length=226
Score = 311 bits (797), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 172/210 (82%), Gaps = 0/210 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
L +DV T GK DG +ELPAELFD ++AL+HQVV AQ A ARQGTHSTKTRGEVSGGG
Sbjct 4 LVLDVHTADGKTDGTVELPAELFDRKVSVALLHQVVNAQLAGARQGTHSTKTRGEVSGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
+KP+RQKGTGRARQGS RAP FTGGG+ HGPKPRDYSQRTPKKM AAAL GALS+RAR G
Sbjct 64 KKPFRQKGTGRARQGSIRAPHFTGGGIAHGPKPRDYSQRTPKKMKAAALLGALSNRARTG 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIHAITE+V GQ PSTK+AR FL S+T+RK VLVV+GR D+ SVRNLPGV P+Q
Sbjct 124 RIHAITEVVAGQKPSTKAARTFLESITDRKNVLVVVGREDQTSRLSVRNLPGVRFCGPEQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTS 218
+ T+DVL+ADDV+FSVE+L+ +I + +S
Sbjct 184 ITTFDVLKADDVIFSVESLHKFIELKSKSS 213
>gi|317507410|ref|ZP_07965144.1| ribosomal protein L4/L1 family protein [Segniliparus rugosus
ATCC BAA-974]
gi|316254295|gb|EFV13631.1| ribosomal protein L4/L1 family protein [Segniliparus rugosus
ATCC BAA-974]
Length=218
Score = 311 bits (797), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/213 (70%), Positives = 172/213 (81%), Gaps = 0/213 (0%)
Query 8 TLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGG 67
+L + + GK G +LPAE+FD PANI+L+HQVVTAQ AAARQGTH KTRGEVSGG
Sbjct 2 SLTVTIHAADGKSAGTFDLPAEIFDAPANISLLHQVVTAQLAAARQGTHKAKTRGEVSGG 61
Query 68 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 127
G+KPY+QKGTGRARQGSTRAP FTGGG VHGP PRDYSQRTPKKM AAALRGALSDRAR
Sbjct 62 GKKPYKQKGTGRARQGSTRAPHFTGGGTVHGPVPRDYSQRTPKKMKAAALRGALSDRARG 121
Query 128 GRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPD 187
RIH + ELV GQ PSTK A AFL S++ R ++LVV+GR+DEAG KSVRNLP HIL PD
Sbjct 122 ERIHIVDELVAGQTPSTKKASAFLDSISIRPRLLVVLGRADEAGLKSVRNLPHAHILTPD 181
Query 188 QLNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
QLNTYDVL++DD+VFS+EAL +I + +E
Sbjct 182 QLNTYDVLKSDDIVFSLEALTTFIEHHKVNKKE 214
>gi|296119210|ref|ZP_06837780.1| ribosomal protein L4/L1 family protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295967836|gb|EFG81091.1| ribosomal protein L4/L1 family protein [Corynebacterium ammoniagenes
DSM 20306]
Length=221
Score = 311 bits (796), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 149/204 (74%), Positives = 169/204 (83%), Gaps = 0/204 (0%)
Query 8 TLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGG 67
LK+DV+T GK +G++ELPAE+FD +IALMHQVV AQ AAARQGTHSTKTRGEV GG
Sbjct 3 NLKLDVQTAEGKTNGSVELPAEIFDAEVSIALMHQVVNAQLAAARQGTHSTKTRGEVRGG 62
Query 68 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 127
GRKP+RQKGTGRARQGS RAP +TGGG VHGPKPRDY+QRTPKKMI AAL GALSDRARN
Sbjct 63 GRKPFRQKGTGRARQGSIRAPHYTGGGTVHGPKPRDYAQRTPKKMIKAALFGALSDRARN 122
Query 128 GRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPD 187
RIH I ELV GQ PSTKSA+AF+ LT+RK +L+V+GR D +S NLP VHIL
Sbjct 123 ERIHVIEELVAGQTPSTKSAKAFIERLTDRKTILLVVGREDLNARRSANNLPNVHILDAG 182
Query 188 QLNTYDVLRADDVVFSVEALNAYI 211
QLNTYDVL ADDVVFSVEAL+++I
Sbjct 183 QLNTYDVLNADDVVFSVEALHSFI 206
>gi|25027079|ref|NP_737133.1| 50S ribosomal protein L4 [Corynebacterium efficiens YS-314]
gi|259506792|ref|ZP_05749692.1| 50S ribosomal protein L4 [Corynebacterium efficiens YS-314]
gi|46577270|sp|Q8FS79.1|RL4_COREF RecName: Full=50S ribosomal protein L4
gi|23492359|dbj|BAC17333.1| putative 50S ribosomal protein L4 [Corynebacterium efficiens
YS-314]
gi|259165663|gb|EEW50217.1| 50S ribosomal protein L4 [Corynebacterium efficiens YS-314]
Length=218
Score = 311 bits (796), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/212 (71%), Positives = 173/212 (82%), Gaps = 0/212 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
L +DV+T G +G+++LPAE+FD ++AL+HQVV AQ AAARQGTHSTKTR EV GGG
Sbjct 4 LTLDVQTAEGTTNGSVDLPAEIFDREVSVALLHQVVNAQLAAARQGTHSTKTRAEVRGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP FTGGG+ HGPKPRDY+QRTPKKMI AAL GALSDRARN
Sbjct 64 RKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYAQRTPKKMIKAALYGALSDRARNE 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH I+ELV GQ PSTKSA+AF+ LTERK VL+VIGR D KS NLPGVHILA DQ
Sbjct 124 RIHVISELVPGQAPSTKSAKAFIERLTERKSVLLVIGREDINAQKSANNLPGVHILAADQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
LNTYDVL +DD+VFSVEAL+ +I T ++E
Sbjct 184 LNTYDVLNSDDIVFSVEALHTFINRATGAAQE 215
>gi|343927782|ref|ZP_08767250.1| 50S ribosomal protein L4 [Gordonia alkanivorans NBRC 16433]
gi|343762423|dbj|GAA14176.1| 50S ribosomal protein L4 [Gordonia alkanivorans NBRC 16433]
Length=229
Score = 310 bits (795), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 160/215 (75%), Positives = 177/215 (83%), Gaps = 0/215 (0%)
Query 1 MAAQEQKTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKT 60
M+ + L +DVKT GK +G ++LPA LFD PANIALMHQVV AQ+AAARQGTHSTKT
Sbjct 1 MSTETTTKLTLDVKTADGKTNGTVDLPAALFDAPANIALMHQVVVAQQAAARQGTHSTKT 60
Query 61 RGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGA 120
RGEV GGG KPYRQKGTGRARQGSTRAPQFTGGG VHGP+PRDYSQRTPKKM AAALRGA
Sbjct 61 RGEVRGGGAKPYRQKGTGRARQGSTRAPQFTGGGTVHGPQPRDYSQRTPKKMKAAALRGA 120
Query 121 LSDRARNGRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPG 180
LSDRARN RIH ITELV GQ PSTKSAR FL SL++R++ LVV+GR D KSV NL
Sbjct 121 LSDRARNERIHVITELVAGQAPSTKSAREFLESLSDRRKFLVVLGREDLTAWKSVANLDN 180
Query 181 VHILAPDQLNTYDVLRADDVVFSVEALNAYIAANT 215
V +APDQLNTYDVL +D+VVFSVE LNA+I NT
Sbjct 181 VLPIAPDQLNTYDVLDSDEVVFSVETLNAFIEQNT 215
>gi|296141114|ref|YP_003648357.1| 50S ribosomal protein L4/L1e [Tsukamurella paurometabola DSM
20162]
gi|296029248|gb|ADG80018.1| ribosomal protein L4/L1e [Tsukamurella paurometabola DSM 20162]
Length=217
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/211 (72%), Positives = 170/211 (81%), Gaps = 0/211 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
L +DVKT GK DG +ELPA +FDV NI+LMHQVV AQ AAAR GTHSTKTRGEV GGG
Sbjct 4 LTLDVKTADGKTDGTVELPAAIFDVEPNISLMHQVVIAQLAAARAGTHSTKTRGEVRGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKPYRQKGTGRARQGSTRAPQF GGG VHGP+PRDYSQRTPKKM AAALRGAL++R R
Sbjct 64 RKPYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALTERVRED 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH +TELV GQ STK+AR FLA L+ERK+ LVV+GR D +SV+NLP + PDQ
Sbjct 124 RIHVVTELVAGQEASTKTARLFLAQLSERKKFLVVVGREDLTAQRSVQNLPNAKWIYPDQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSE 219
LNTYDVL ADD+VFS EAL ++IA+ + T E
Sbjct 184 LNTYDVLDADDLVFSREALGSFIASASKTEE 214
>gi|255324737|ref|ZP_05365851.1| ribosomal protein L4/L1 family protein [Corynebacterium tuberculostearicum
SK141]
gi|311740076|ref|ZP_07713910.1| ribosomal protein L4/L1 family protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|255298212|gb|EET77515.1| ribosomal protein L4/L1 family protein [Corynebacterium tuberculostearicum
SK141]
gi|311305149|gb|EFQ81218.1| ribosomal protein L4/L1 family protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length=217
Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/213 (71%), Positives = 171/213 (81%), Gaps = 0/213 (0%)
Query 8 TLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGG 67
LK+DV T GK +G+++LPAE+FD A+IALMHQVV AQ AAARQGTH+TKTRG+V GG
Sbjct 3 NLKLDVHTSEGKTNGSVDLPAEIFDTEASIALMHQVVNAQLAAARQGTHATKTRGDVRGG 62
Query 68 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 127
GRKP+RQKGTGRARQGS RAP +TGGG VHGP+PRDY+QRTPKKMI AAL GALSDRARN
Sbjct 63 GRKPFRQKGTGRARQGSIRAPHYTGGGTVHGPQPRDYAQRTPKKMIKAALFGALSDRARN 122
Query 128 GRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPD 187
RIH I ELV GQ PSTKSA+AFL SLTERK VL+VIGR D +S NLP V IL
Sbjct 123 ERIHVIEELVPGQKPSTKSAKAFLESLTERKNVLLVIGREDINARRSANNLPNVQILDAG 182
Query 188 QLNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
QLNTYDVL +DDVVFSVEAL+ +I T +E
Sbjct 183 QLNTYDVLYSDDVVFSVEALHTFINRATGADKE 215
>gi|227505215|ref|ZP_03935264.1| 50S ribosomal protein L4 [Corynebacterium striatum ATCC 6940]
gi|227198189|gb|EEI78237.1| 50S ribosomal protein L4 [Corynebacterium striatum ATCC 6940]
Length=220
Score = 305 bits (780), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/214 (70%), Positives = 170/214 (80%), Gaps = 0/214 (0%)
Query 8 TLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGG 67
LK+DV+T GK +G++ELPAE+FD A+IALMHQVV AQ AAARQGTH KTRGEV GG
Sbjct 3 NLKLDVQTAEGKTNGSVELPAEIFDTEASIALMHQVVNAQLAAARQGTHKAKTRGEVRGG 62
Query 68 GRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARN 127
GRKP+RQKGTGRARQGS RAP +TGGG+ HGP PRDYSQRTPKKMI AAL GALSDRARN
Sbjct 63 GRKPFRQKGTGRARQGSIRAPHYTGGGISHGPVPRDYSQRTPKKMIKAALFGALSDRARN 122
Query 128 GRIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPD 187
RIH I ELV GQ PSTK+A+AF+ LTERK VL+V+GR D +S NLP V IL
Sbjct 123 ERIHVIEELVPGQTPSTKAAKAFIERLTERKNVLLVVGREDINARRSANNLPNVQILDAG 182
Query 188 QLNTYDVLRADDVVFSVEALNAYIAANTTTSEEV 221
QLNTYDVL +DDVVFSVEAL+ ++A +EEV
Sbjct 183 QLNTYDVLYSDDVVFSVEALHTFVARAQGANEEV 216
>gi|227832220|ref|YP_002833927.1| 50S ribosomal protein L4 [Corynebacterium aurimucosum ATCC 700975]
gi|262183925|ref|ZP_06043346.1| 50S ribosomal protein L4 [Corynebacterium aurimucosum ATCC 700975]
gi|254803728|sp|C3PKQ3.1|RL4_CORA7 RecName: Full=50S ribosomal protein L4
gi|227453236|gb|ACP31989.1| 50S ribosomal protein L4 [Corynebacterium aurimucosum ATCC 700975]
Length=220
Score = 304 bits (779), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/212 (71%), Positives = 168/212 (80%), Gaps = 0/212 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV+T GK +G +ELPAELFD A+IALMHQVV AQ AAARQGTH TKTRGEV GGG
Sbjct 4 LKLDVQTADGKTNGTVELPAELFDTEASIALMHQVVNAQLAAARQGTHKTKTRGEVRGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP +TGGG VHGP PRDYSQRTPK+MI AAL GALSDRARN
Sbjct 64 RKPFRQKGTGRARQGSIRAPHYTGGGTVHGPVPRDYSQRTPKRMIKAALYGALSDRARNE 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH I ELV GQ PSTK A+AF+ LT+RK VL+VIGR D +S NLP V IL Q
Sbjct 124 RIHVIEELVPGQTPSTKQAKAFIERLTDRKNVLLVIGREDINARRSANNLPNVQILDAGQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYIAANTTTSEE 220
LNTYDVL +DDVVFSVEAL+ ++ T +EE
Sbjct 184 LNTYDVLYSDDVVFSVEALHTFVERATGAAEE 215
>gi|334564057|ref|ZP_08517048.1| 50S ribosomal protein L4 [Corynebacterium bovis DSM 20582]
Length=221
Score = 304 bits (778), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 145/203 (72%), Positives = 164/203 (81%), Gaps = 0/203 (0%)
Query 9 LKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGG 68
LK+DV+T G +G ++LPA +FDV ++ LMHQVV AQ AA RQGTH+TKTRGEV GGG
Sbjct 4 LKLDVQTADGTTNGTVDLPASIFDVEVSVPLMHQVVVAQLAAKRQGTHATKTRGEVRGGG 63
Query 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
RKP+RQKGTGRARQGS RAP FTGGG VHGP+PRDY QRTPKKM AAALRGALSDR R+
Sbjct 64 RKPFRQKGTGRARQGSIRAPHFTGGGTVHGPQPRDYDQRTPKKMKAAALRGALSDRVRHD 123
Query 129 RIHAITELVEGQNPSTKSARAFLASLTERKQVLVVIGRSDEAGAKSVRNLPGVHILAPDQ 188
RIH + ELV GQ PSTK+AR F+ LT+RK VL+V+GR D G KS NLP VHILA DQ
Sbjct 124 RIHVVEELVPGQTPSTKAARTFIERLTDRKSVLLVLGREDVTGWKSANNLPNVHILASDQ 183
Query 189 LNTYDVLRADDVVFSVEALNAYI 211
LNTYDVL ADDVVFSVEAL +I
Sbjct 184 LNTYDVLNADDVVFSVEALTTFI 206
Lambda K H
0.313 0.128 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 282939969064
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40