BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0703
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607843|ref|NP_215217.1| 50S ribosomal protein L23 [Mycobact... 200 5e-50
gi|340625723|ref|YP_004744175.1| putative 50S ribosomal protein ... 199 1e-49
gi|2113868|emb|CAA73674.1| rplW [Mycobacterium bovis BCG] 199 2e-49
gi|183981055|ref|YP_001849346.1| 50S ribosomal protein L23, RplW... 191 3e-47
gi|296168559|ref|ZP_06850363.1| 50S ribosomal protein L23 [Mycob... 189 1e-46
gi|118616573|ref|YP_904905.1| 50S ribosomal protein L23 [Mycobac... 189 2e-46
gi|240167705|ref|ZP_04746364.1| 50S ribosomal protein L23 [Mycob... 188 2e-46
gi|41410261|ref|NP_963097.1| 50S ribosomal protein L23 [Mycobact... 188 2e-46
gi|342861793|ref|ZP_08718438.1| 50S ribosomal protein L23 [Mycob... 186 7e-46
gi|169630898|ref|YP_001704547.1| 50S ribosomal protein L23 [Myco... 185 2e-45
gi|108797988|ref|YP_638185.1| 50S ribosomal protein L23 [Mycobac... 179 8e-44
gi|118468304|ref|YP_885821.1| 50S ribosomal protein L23 [Mycobac... 179 1e-43
gi|15828000|ref|NP_302263.1| 50S ribosomal protein L23 [Mycobact... 177 5e-43
gi|333991976|ref|YP_004524590.1| 50S ribosomal protein L23 RplW ... 176 7e-43
gi|145225623|ref|YP_001136301.1| 50S ribosomal protein L23 [Myco... 174 3e-42
gi|120402318|ref|YP_952147.1| 50S ribosomal protein L23 [Mycobac... 172 2e-41
gi|334564058|ref|ZP_08517049.1| 50S ribosomal protein L23 [Coryn... 171 4e-41
gi|343927781|ref|ZP_08767249.1| 50S ribosomal protein L23 [Gordo... 169 1e-40
gi|262203622|ref|YP_003274830.1| ribosomal protein L25/L23 [Gord... 167 5e-40
gi|336326437|ref|YP_004606403.1| 50S ribosomal protein L23 [Cory... 166 8e-40
gi|68536921|ref|YP_251626.1| 50S ribosomal protein L23 [Coryneba... 166 1e-39
gi|340795347|ref|YP_004760810.1| 50S ribosomal protein L23 [Cory... 166 1e-39
gi|260579265|ref|ZP_05847149.1| 50S ribosomal protein L23 [Coryn... 165 2e-39
gi|226305343|ref|YP_002765301.1| 50S ribosomal protein L23 [Rhod... 165 3e-39
gi|134103262|ref|YP_001108923.1| 50S ribosomal protein L23 [Sacc... 164 4e-39
gi|54022702|ref|YP_116944.1| 50S ribosomal protein L23 [Nocardia... 164 6e-39
gi|111023098|ref|YP_706070.1| 50S ribosomal protein L23 [Rhodoco... 163 8e-39
gi|312140916|ref|YP_004008252.1| 50S ribosomal protein l23 rplw ... 162 2e-38
gi|302523995|ref|ZP_07276337.1| ribosomal protein L23 [Streptomy... 162 2e-38
gi|326385097|ref|ZP_08206767.1| 50S ribosomal protein L23 [Gordo... 160 4e-38
gi|213964869|ref|ZP_03393068.1| ribosomal protein L23 [Corynebac... 160 4e-38
gi|333918149|ref|YP_004491730.1| 50S ribosomal protein L23 [Amyc... 160 6e-38
gi|300782610|ref|YP_003762901.1| 50S ribosomal protein L23 [Amyc... 160 7e-38
gi|237786393|ref|YP_002907098.1| 50S ribosomal protein L23 [Cory... 159 1e-37
gi|319948721|ref|ZP_08022842.1| 50S ribosomal protein L23 [Dietz... 157 5e-37
gi|256380596|ref|YP_003104256.1| 50S ribosomal protein L23 [Acti... 156 1e-36
gi|227832221|ref|YP_002833928.1| 50S ribosomal protein L23 [Cory... 155 2e-36
gi|257054472|ref|YP_003132304.1| 50S ribosomal protein L23 [Sacc... 155 2e-36
gi|296141113|ref|YP_003648356.1| 50S ribosomal protein L25/L23 [... 155 3e-36
gi|300857764|ref|YP_003782747.1| 50S ribosomal protein L23 [Cory... 153 1e-35
gi|337290017|ref|YP_004629038.1| 50S ribosomal protein L23 [Cory... 152 1e-35
gi|331699174|ref|YP_004335413.1| 50S ribosomal protein L25/L23 [... 152 1e-35
gi|227502656|ref|ZP_03932705.1| 50S ribosomal protein L23 [Coryn... 150 6e-35
gi|255324738|ref|ZP_05365852.1| ribosomal protein L23 [Corynebac... 150 6e-35
gi|269128514|ref|YP_003301884.1| 50S ribosomal protein L25/L23 [... 150 8e-35
gi|25027080|ref|NP_737134.1| 50S ribosomal protein L23 [Coryneba... 149 1e-34
gi|117927517|ref|YP_872068.1| 50S ribosomal protein L23P [Acidot... 149 1e-34
gi|19551748|ref|NP_599750.1| 50S ribosomal protein L23 [Coryneba... 149 1e-34
gi|172039997|ref|YP_001799711.1| 50S ribosomal protein L23 [Cory... 149 1e-34
gi|325000490|ref|ZP_08121602.1| 50S ribosomal protein L23 [Pseud... 149 1e-34
>gi|15607843|ref|NP_215217.1| 50S ribosomal protein L23 [Mycobacterium tuberculosis H37Rv]
gi|15840110|ref|NP_335147.1| 50S ribosomal protein L23 [Mycobacterium tuberculosis CDC1551]
gi|31791888|ref|NP_854381.1| 50S ribosomal protein L23 [Mycobacterium bovis AF2122/97]
83 more sequence titles
Length=100
Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA
Sbjct 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA
Sbjct 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
>gi|340625723|ref|YP_004744175.1| putative 50S ribosomal protein L23 RPLW [Mycobacterium canettii
CIPT 140010059]
gi|340003913|emb|CCC43047.1| putative 50S ribosomal protein L23 RPLW [Mycobacterium canettii
CIPT 140010059]
Length=100
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA
Sbjct 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTGYGKRKSTKRAIVTLAPGS+PIDLFGAPA
Sbjct 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSKPIDLFGAPA 100
>gi|2113868|emb|CAA73674.1| rplW [Mycobacterium bovis BCG]
Length=100
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/100 (99%), Positives = 99/100 (99%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIF VKVASVNTA
Sbjct 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFGVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA
Sbjct 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
>gi|183981055|ref|YP_001849346.1| 50S ribosomal protein L23, RplW [Mycobacterium marinum M]
gi|226734833|sp|B2HSN3.1|RL23_MYCMM RecName: Full=50S ribosomal protein L23
gi|183174381|gb|ACC39491.1| 50S ribosomal protein L23, RplW [Mycobacterium marinum M]
Length=100
Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/100 (93%), Positives = 97/100 (97%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ DPRDIILAPVISEKSY LLDDNVYTF+V PDSNKTQIKIA+EKIFAVKVASVNTA
Sbjct 1 MATIVDPRDIILAPVISEKSYALLDDNVYTFVVHPDSNKTQIKIAIEKIFAVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTGYGKRKSTKRAIVTLAPGS+PIDLFGAPA
Sbjct 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSKPIDLFGAPA 100
>gi|296168559|ref|ZP_06850363.1| 50S ribosomal protein L23 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896622|gb|EFG76261.1| 50S ribosomal protein L23 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=100
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/100 (91%), Positives = 97/100 (97%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ DPRDIILAPVISEKSYGLLD+NVYTF+V PDSNKTQIKIA+EKIF+VKV SVNTA
Sbjct 1 MATITDPRDIILAPVISEKSYGLLDENVYTFVVHPDSNKTQIKIAIEKIFSVKVVSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTGYGKRKSTKRAIVTLAPGS+PIDLFGAPA
Sbjct 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSKPIDLFGAPA 100
>gi|118616573|ref|YP_904905.1| 50S ribosomal protein L23 [Mycobacterium ulcerans Agy99]
gi|166987277|sp|A0PM65.1|RL23_MYCUA RecName: Full=50S ribosomal protein L23
gi|118568683|gb|ABL03434.1| 50S ribosomal protein L23, RplW [Mycobacterium ulcerans Agy99]
Length=100
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/100 (92%), Positives = 96/100 (96%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ DPRDIILAPVISEKSY LLDDNVY F+V PDSNKTQIKIA+EKIFAVKVASVNTA
Sbjct 1 MATIVDPRDIILAPVISEKSYALLDDNVYIFVVHPDSNKTQIKIAIEKIFAVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTGYGKRKSTKRAIVTLAPGS+PIDLFGAPA
Sbjct 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSKPIDLFGAPA 100
>gi|240167705|ref|ZP_04746364.1| 50S ribosomal protein L23 [Mycobacterium kansasii ATCC 12478]
Length=100
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/100 (92%), Positives = 98/100 (98%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ADPRDIILAPVISEKSYGLLDDNVYTF+V PDSNKTQIKIA+EKIFAVKVASVNTA
Sbjct 1 MATIADPRDIILAPVISEKSYGLLDDNVYTFVVHPDSNKTQIKIAIEKIFAVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR GKRKRTRTGYG+RK+TKRAIVTLAPGS+PIDLFGAPA
Sbjct 61 NRPGKRKRTRTGYGRRKNTKRAIVTLAPGSKPIDLFGAPA 100
>gi|41410261|ref|NP_963097.1| 50S ribosomal protein L23 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118462258|ref|YP_883604.1| 50S ribosomal protein L23 [Mycobacterium avium 104]
gi|254776905|ref|ZP_05218421.1| 50S ribosomal protein L23 [Mycobacterium avium subsp. avium ATCC
25291]
6 more sequence titles
Length=100
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/100 (91%), Positives = 97/100 (97%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ DPRDIILAPVISEKSY LLDDNVYTF+V PDSNKTQIKIA+EKIF+VKVASVNTA
Sbjct 1 MATVTDPRDIILAPVISEKSYSLLDDNVYTFVVHPDSNKTQIKIAIEKIFSVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTG+GKRKSTKRAIVTLAPGS+PIDLFGAPA
Sbjct 61 NRQGKRKRTRTGFGKRKSTKRAIVTLAPGSKPIDLFGAPA 100
>gi|342861793|ref|ZP_08718438.1| 50S ribosomal protein L23 [Mycobacterium colombiense CECT 3035]
gi|342130610|gb|EGT83914.1| 50S ribosomal protein L23 [Mycobacterium colombiense CECT 3035]
Length=100
Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/100 (90%), Positives = 96/100 (96%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ DPRDIIL PVISEKSY LLDDNVYTF+V PDSNKTQIKIA+EKIF+VKVASVNTA
Sbjct 1 MATITDPRDIILGPVISEKSYSLLDDNVYTFVVHPDSNKTQIKIAIEKIFSVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTG+GKRKSTKRAIVTLAPGS+PIDLFGAPA
Sbjct 61 NRQGKRKRTRTGFGKRKSTKRAIVTLAPGSKPIDLFGAPA 100
>gi|169630898|ref|YP_001704547.1| 50S ribosomal protein L23 [Mycobacterium abscessus ATCC 19977]
gi|226734832|sp|B1MGE8.1|RL23_MYCA9 RecName: Full=50S ribosomal protein L23
gi|169242865|emb|CAM63893.1| 50S ribosomal protein L23 [Mycobacterium abscessus]
Length=100
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/100 (87%), Positives = 98/100 (98%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ADPRDIILAPVISEKSY L++DNVYTF+V PDSNKTQIKIA+E+IF+VKV+SVNTA
Sbjct 1 MATIADPRDIILAPVISEKSYSLIEDNVYTFIVHPDSNKTQIKIAIEQIFSVKVSSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTG+G+RKSTKRAIVTLAPGS+PIDLFGAPA
Sbjct 61 NRQGKRKRTRTGFGQRKSTKRAIVTLAPGSKPIDLFGAPA 100
>gi|108797988|ref|YP_638185.1| 50S ribosomal protein L23 [Mycobacterium sp. MCS]
gi|119867084|ref|YP_937036.1| 50S ribosomal protein L23 [Mycobacterium sp. KMS]
gi|126433650|ref|YP_001069341.1| 50S ribosomal protein L23 [Mycobacterium sp. JLS]
6 more sequence titles
Length=100
Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/100 (86%), Positives = 95/100 (95%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ DPRDIILAPVISEKSYGL++DNVYTF+V PDSNKTQIKIA+EKIF VKV SVNTA
Sbjct 1 MATVTDPRDIILAPVISEKSYGLIEDNVYTFIVHPDSNKTQIKIAIEKIFKVKVDSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTR+G+G+RKSTKRAIVTLA GS+PIDLFGAPA
Sbjct 61 NRQGKRKRTRSGFGQRKSTKRAIVTLAAGSKPIDLFGAPA 100
>gi|118468304|ref|YP_885821.1| 50S ribosomal protein L23 [Mycobacterium smegmatis str. MC2 155]
gi|166987270|sp|A0QSD3.1|RL23_MYCS2 RecName: Full=50S ribosomal protein L23
gi|118169591|gb|ABK70487.1| ribosomal protein L23 [Mycobacterium smegmatis str. MC2 155]
Length=100
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/100 (87%), Positives = 94/100 (94%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ DPRDIILAPVISEKSYGL++DNVYTF+V PDSNKTQIKIA+EKIF VKV SVNTA
Sbjct 1 MATITDPRDIILAPVISEKSYGLIEDNVYTFVVHPDSNKTQIKIAIEKIFDVKVDSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTG+GKRKSTKRAIV LA GS+PIDLFGAPA
Sbjct 61 NRQGKRKRTRTGFGKRKSTKRAIVKLAAGSKPIDLFGAPA 100
>gi|15828000|ref|NP_302263.1| 50S ribosomal protein L23 [Mycobacterium leprae TN]
gi|221230477|ref|YP_002503893.1| 50S ribosomal protein L23 [Mycobacterium leprae Br4923]
gi|3122712|sp|O32983.1|RL23_MYCLE RecName: Full=50S ribosomal protein L23
gi|254800948|sp|B8ZSB7.1|RL23_MYCLB RecName: Full=50S ribosomal protein L23
gi|2370267|emb|CAB11464.1| ribosomal protein L23 [Mycobacterium leprae]
gi|13093553|emb|CAC30815.1| 50S ribosomal protein L23 [Mycobacterium leprae]
gi|219933584|emb|CAR71957.1| 50S ribosomal protein L23 [Mycobacterium leprae Br4923]
Length=100
Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 95/100 (95%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+AD RDIILAPVISEKSYGLLDDNVYTF+V PDSNKTQIKIA+EKIF+VKVASVNT+
Sbjct 1 MATIADSRDIILAPVISEKSYGLLDDNVYTFVVHPDSNKTQIKIAIEKIFSVKVASVNTS 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR+GK KRTRTG+G+RK+TKRAIVTLAPGS+ IDLFG PA
Sbjct 61 NRKGKCKRTRTGFGRRKNTKRAIVTLAPGSKSIDLFGTPA 100
>gi|333991976|ref|YP_004524590.1| 50S ribosomal protein L23 RplW [Mycobacterium sp. JDM601]
gi|333487944|gb|AEF37336.1| 50S ribosomal protein L23 RplW [Mycobacterium sp. JDM601]
Length=100
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 94/100 (94%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT++DPRDII+APVISEKSYGL+++N YTF+V PDSNKTQIKIA+EKIFAVKVASVNTA
Sbjct 1 MATVSDPRDIIVAPVISEKSYGLIEENTYTFIVHPDSNKTQIKIAIEKIFAVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR GKRKR+R GYGKRK TKRAIVTLAPGS+PIDLF APA
Sbjct 61 NRPGKRKRSRAGYGKRKDTKRAIVTLAPGSKPIDLFAAPA 100
>gi|145225623|ref|YP_001136301.1| 50S ribosomal protein L23 [Mycobacterium gilvum PYR-GCK]
gi|315445976|ref|YP_004078855.1| 50S ribosomal protein L23P [Mycobacterium sp. Spyr1]
gi|189042298|sp|A4T1U0.1|RL23_MYCGI RecName: Full=50S ribosomal protein L23
gi|145218109|gb|ABP47513.1| LSU ribosomal protein L23P [Mycobacterium gilvum PYR-GCK]
gi|315264279|gb|ADU01021.1| LSU ribosomal protein L23P [Mycobacterium sp. Spyr1]
Length=100
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 93/100 (93%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MA + DPRDIIL+PVISEKSYGL++DNVYTF+V PDSNKTQIKIA+EKIF VKV SVNTA
Sbjct 1 MANVVDPRDIILSPVISEKSYGLIEDNVYTFIVHPDSNKTQIKIAIEKIFKVKVDSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR GKRKRTRTGYG+RK+TKRAIVTLA GS+PIDLFGAPA
Sbjct 61 NRPGKRKRTRTGYGQRKATKRAIVTLAAGSKPIDLFGAPA 100
>gi|120402318|ref|YP_952147.1| 50S ribosomal protein L23 [Mycobacterium vanbaalenii PYR-1]
gi|166987278|sp|A1T4P1.1|RL23_MYCVP RecName: Full=50S ribosomal protein L23
gi|119955136|gb|ABM12141.1| LSU ribosomal protein L23P [Mycobacterium vanbaalenii PYR-1]
Length=100
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/100 (83%), Positives = 93/100 (93%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MA + DPRDIIL+PVISEKSYGL++DNVYTF+V PDSNKTQIKIA+EKIF VKV SVNTA
Sbjct 1 MANVTDPRDIILSPVISEKSYGLIEDNVYTFIVAPDSNKTQIKIAIEKIFKVKVDSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR GKRKRTRTG+G+RK+TKRAIVTLA GS+PIDLFGAPA
Sbjct 61 NRPGKRKRTRTGFGQRKATKRAIVTLAAGSKPIDLFGAPA 100
>gi|334564058|ref|ZP_08517049.1| 50S ribosomal protein L23 [Corynebacterium bovis DSM 20582]
Length=101
Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 91/100 (91%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M+T+ DPRDIILAPV+SEKSYGL++ NVYTFLV PDSNKTQIKIAVE+IF VKVASVNT+
Sbjct 1 MSTITDPRDIILAPVVSEKSYGLMEQNVYTFLVNPDSNKTQIKIAVEQIFGVKVASVNTS 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTGYG+RK+TKRA+VTL GS PID+FG A
Sbjct 61 NRQGKRKRTRTGYGQRKATKRAMVTLVAGSDPIDIFGGSA 100
>gi|343927781|ref|ZP_08767249.1| 50S ribosomal protein L23 [Gordonia alkanivorans NBRC 16433]
gi|343762422|dbj|GAA14175.1| 50S ribosomal protein L23 [Gordonia alkanivorans NBRC 16433]
Length=101
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/98 (81%), Positives = 91/98 (93%), Gaps = 0/98 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M T+ADPRDIILAPVISEKSYGL++DNVYTFLV P+SNKT+IKIA+EKIF VKVASVNTA
Sbjct 1 MTTVADPRDIILAPVISEKSYGLMEDNVYTFLVHPESNKTEIKIAIEKIFGVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGA 98
NRQGKRKRTR+GYG+RKSTKRAIV+L S+PI++FG
Sbjct 61 NRQGKRKRTRSGYGQRKSTKRAIVSLTADSKPIEIFGG 98
>gi|262203622|ref|YP_003274830.1| ribosomal protein L25/L23 [Gordonia bronchialis DSM 43247]
gi|262086969|gb|ACY22937.1| Ribosomal protein L25/L23 [Gordonia bronchialis DSM 43247]
Length=101
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/98 (80%), Positives = 89/98 (91%), Gaps = 0/98 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT ADPRDI+LAPVISEKSYGL++DNVYTF+V PDSNKTQIKIA+E+IF V+VASVNTA
Sbjct 1 MATQADPRDIVLAPVISEKSYGLMEDNVYTFVVHPDSNKTQIKIAIEQIFGVEVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGA 98
NRQGKRKRTR GYG+RKSTKRA VTL S+PI++FG
Sbjct 61 NRQGKRKRTRFGYGQRKSTKRAFVTLTEDSKPIEIFGG 98
>gi|336326437|ref|YP_004606403.1| 50S ribosomal protein L23 [Corynebacterium resistens DSM 45100]
gi|336102419|gb|AEI10239.1| 50S ribosomal protein L23 [Corynebacterium resistens DSM 45100]
Length=101
Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 90/100 (90%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M+T+ADPRDIILAPV+SEKSYGL++ NVYTFLV P SNKTQIKIAVE+IF VKVASVNT
Sbjct 1 MSTVADPRDIILAPVVSEKSYGLMEQNVYTFLVNPASNKTQIKIAVEQIFGVKVASVNTL 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR+GKRKRTRTGYG+RK+TKRA+VTL GS PID+FG A
Sbjct 61 NREGKRKRTRTGYGRRKATKRAMVTLVAGSDPIDIFGGSA 100
>gi|68536921|ref|YP_251626.1| 50S ribosomal protein L23 [Corynebacterium jeikeium K411]
gi|123775660|sp|Q4JT49.1|RL23_CORJK RecName: Full=50S ribosomal protein L23
gi|68264520|emb|CAI38008.1| 50S ribosomal protein L23 [Corynebacterium jeikeium K411]
Length=101
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/98 (79%), Positives = 89/98 (91%), Gaps = 0/98 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M+T+ADPRDII+APV+SEKSYGL++ NVYTFLV P SNKTQIKIAVE+IF VKVASVNT
Sbjct 1 MSTVADPRDIIIAPVVSEKSYGLMEQNVYTFLVHPSSNKTQIKIAVEQIFGVKVASVNTV 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGA 98
NR+GKRKRTRTGYG+RK+TKRA+VTL GS PID+FG
Sbjct 61 NREGKRKRTRTGYGQRKATKRAMVTLVAGSDPIDIFGG 98
>gi|340795347|ref|YP_004760810.1| 50S ribosomal protein L23 [Corynebacterium variabile DSM 44702]
gi|340535257|gb|AEK37737.1| 50S ribosomal protein L23 [Corynebacterium variabile DSM 44702]
Length=100
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 89/100 (89%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M T+ADPRD+I+APV+SEKSYGL++ NVYTFLV PDSNKTQIKIAVE+IF VKVASVNT
Sbjct 1 MTTIADPRDVIIAPVVSEKSYGLMEQNVYTFLVSPDSNKTQIKIAVEEIFGVKVASVNTL 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR GKRKR+RTGYG+RK+TKRA+VTL GS PID+FG A
Sbjct 61 NRAGKRKRSRTGYGQRKATKRAMVTLVAGSEPIDIFGGAA 100
>gi|260579265|ref|ZP_05847149.1| 50S ribosomal protein L23 [Corynebacterium jeikeium ATCC 43734]
gi|258602617|gb|EEW15910.1| 50S ribosomal protein L23 [Corynebacterium jeikeium ATCC 43734]
Length=101
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/98 (79%), Positives = 89/98 (91%), Gaps = 0/98 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M+T+ADPRDII+APV+SEKSYGL++ NVYTFLV P SNKTQIKIAVE+IF VKVASVNT
Sbjct 1 MSTVADPRDIIIAPVVSEKSYGLMEQNVYTFLVNPSSNKTQIKIAVEQIFGVKVASVNTV 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGA 98
NR+GKRKRTRTGYG+RK+TKRA+VTL GS PID+FG
Sbjct 61 NREGKRKRTRTGYGQRKATKRAMVTLVAGSDPIDIFGG 98
>gi|226305343|ref|YP_002765301.1| 50S ribosomal protein L23 [Rhodococcus erythropolis PR4]
gi|229489635|ref|ZP_04383498.1| ribosomal protein L23 [Rhodococcus erythropolis SK121]
gi|259646635|sp|C0ZW27.1|RL23_RHOE4 RecName: Full=50S ribosomal protein L23
gi|226184458|dbj|BAH32562.1| 50S ribosomal protein L23 [Rhodococcus erythropolis PR4]
gi|229323732|gb|EEN89490.1| ribosomal protein L23 [Rhodococcus erythropolis SK121]
Length=101
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/99 (78%), Positives = 89/99 (90%), Gaps = 0/99 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M+T+ADPRDI+LAPVISEKSYGL+++ YTFLV PDSNKTQIKIAVEK+F VKV SVNTA
Sbjct 1 MSTIADPRDILLAPVISEKSYGLIEEGTYTFLVHPDSNKTQIKIAVEKVFGVKVTSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAP 99
NRQGKRKRTR GYGKRK TKRA+VTL+ S+PI++FG P
Sbjct 61 NRQGKRKRTRFGYGKRKDTKRALVTLSADSKPIEIFGGP 99
>gi|134103262|ref|YP_001108923.1| 50S ribosomal protein L23 [Saccharopolyspora erythraea NRRL 2338]
gi|291007945|ref|ZP_06565918.1| 50S ribosomal protein L23 [Saccharopolyspora erythraea NRRL 2338]
gi|166987859|sp|A4FPM3.1|RL23_SACEN RecName: Full=50S ribosomal protein L23
gi|133915885|emb|CAM05998.1| 50S ribosomal protein L23 [Saccharopolyspora erythraea NRRL 2338]
Length=99
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/97 (82%), Positives = 88/97 (91%), Gaps = 0/97 (0%)
Query 4 LADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTANRQ 63
+ DPRDIILAPVISEKSYGLL++N YTFLVRP SNKT+IKIAVEKIF VKV +VNT NRQ
Sbjct 2 IPDPRDIILAPVISEKSYGLLEENQYTFLVRPGSNKTEIKIAVEKIFGVKVTNVNTINRQ 61
Query 64 GKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
GKRKRTRTGYGKRK TKRAIVTL+P S+PI++FG PA
Sbjct 62 GKRKRTRTGYGKRKDTKRAIVTLSPESKPIEIFGGPA 98
>gi|54022702|ref|YP_116944.1| 50S ribosomal protein L23 [Nocardia farcinica IFM 10152]
gi|81680294|sp|Q5Z1W1.1|RL23_NOCFA RecName: Full=50S ribosomal protein L23
gi|54014210|dbj|BAD55580.1| putative ribosomal protein L23 [Nocardia farcinica IFM 10152]
Length=101
Score = 164 bits (414), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/99 (77%), Positives = 89/99 (90%), Gaps = 0/99 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M T+ADPRDI+LAPVISEKSYGL+++ YTFLV PDSNKTQIKIAVEK+F VKV SVNTA
Sbjct 1 MTTIADPRDILLAPVISEKSYGLIEEGTYTFLVHPDSNKTQIKIAVEKVFGVKVTSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAP 99
NRQGKRKRTR GYGKRK+TKRA+VT++ S+PI++FG P
Sbjct 61 NRQGKRKRTRFGYGKRKNTKRALVTISADSKPIEIFGGP 99
>gi|111023098|ref|YP_706070.1| 50S ribosomal protein L23 [Rhodococcus jostii RHA1]
gi|226365597|ref|YP_002783380.1| 50S ribosomal protein L23 [Rhodococcus opacus B4]
gi|123144252|sp|Q0S3H4.1|RL23_RHOSR RecName: Full=50S ribosomal protein L23
gi|254800954|sp|C1B014.1|RL23_RHOOB RecName: Full=50S ribosomal protein L23
gi|110822628|gb|ABG97912.1| 50S ribosomal protein L23 [Rhodococcus jostii RHA1]
gi|226244087|dbj|BAH54435.1| 50S ribosomal protein L23 [Rhodococcus opacus B4]
Length=101
Score = 163 bits (413), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/99 (78%), Positives = 88/99 (89%), Gaps = 0/99 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M+T+ADPRDI+LAPVISEKSYGL+++ YTFLV PDSNKTQIKIAVEKIF V V SVNTA
Sbjct 1 MSTIADPRDILLAPVISEKSYGLIEEGTYTFLVHPDSNKTQIKIAVEKIFGVTVTSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAP 99
NRQGKRKRTR GYGKRK TKRA+VTL+ S+PI++FG P
Sbjct 61 NRQGKRKRTRFGYGKRKDTKRALVTLSADSKPIEIFGGP 99
>gi|312140916|ref|YP_004008252.1| 50S ribosomal protein l23 rplw [Rhodococcus equi 103S]
gi|325675446|ref|ZP_08155130.1| 50S ribosomal protein L23 [Rhodococcus equi ATCC 33707]
gi|311890255|emb|CBH49573.1| 50S ribosomal protein L23 RplW [Rhodococcus equi 103S]
gi|325553417|gb|EGD23095.1| 50S ribosomal protein L23 [Rhodococcus equi ATCC 33707]
Length=101
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/99 (77%), Positives = 87/99 (88%), Gaps = 0/99 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M T+ADPRDI+LAPVISEKSYGL+++ YTFLV PDSNKTQIKIAVEK+F V V SVNTA
Sbjct 1 MTTIADPRDILLAPVISEKSYGLIEEGTYTFLVHPDSNKTQIKIAVEKVFGVTVTSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAP 99
NRQGKRKRTR GYGKRK TKRA+VTL+ S+PI++FG P
Sbjct 61 NRQGKRKRTRFGYGKRKDTKRALVTLSADSKPIEIFGGP 99
>gi|302523995|ref|ZP_07276337.1| ribosomal protein L23 [Streptomyces sp. AA4]
gi|302432890|gb|EFL04706.1| ribosomal protein L23 [Streptomyces sp. AA4]
Length=103
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/101 (78%), Positives = 92/101 (92%), Gaps = 2/101 (1%)
Query 1 MATLA--DPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVN 58
M+++A DPRDI+LAPVISEKSYGLL+D+ YTF+VRPD+NKTQIKIAVEK+F VKV SVN
Sbjct 1 MSSVAIPDPRDILLAPVISEKSYGLLEDHKYTFIVRPDANKTQIKIAVEKVFGVKVVSVN 60
Query 59 TANRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAP 99
TANRQGKRKRTRTG+GKRK TKRAIVTL+P S+ I++FG P
Sbjct 61 TANRQGKRKRTRTGFGKRKDTKRAIVTLSPESKAIEIFGGP 101
>gi|326385097|ref|ZP_08206767.1| 50S ribosomal protein L23 [Gordonia neofelifaecis NRRL B-59395]
gi|326196182|gb|EGD53386.1| 50S ribosomal protein L23 [Gordonia neofelifaecis NRRL B-59395]
Length=101
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/98 (78%), Positives = 88/98 (90%), Gaps = 0/98 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT ADPRDIILAPVISEK+YGL++D YTFLV PDSNKTQIKIA+E+IF V V SVNTA
Sbjct 1 MATHADPRDIILAPVISEKAYGLIEDGAYTFLVHPDSNKTQIKIAIEQIFDVTVTSVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGA 98
NRQGKRKRTR+G+GKRK+TKRAIVTL+ S+PI++FG
Sbjct 61 NRQGKRKRTRSGFGKRKNTKRAIVTLSADSKPIEIFGG 98
>gi|213964869|ref|ZP_03393068.1| ribosomal protein L23 [Corynebacterium amycolatum SK46]
gi|213952405|gb|EEB63788.1| ribosomal protein L23 [Corynebacterium amycolatum SK46]
Length=101
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 88/100 (88%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+ADPRDII+APV+SEKSYGL++ VYTFLV D+NKTQIKIAV++IF KVASVNT
Sbjct 1 MATIADPRDIIVAPVVSEKSYGLMEQGVYTFLVHTDANKTQIKIAVQEIFGAKVASVNTL 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR+GKRKR+RTGYGKRK+TKRA VTLA GS PID+FG A
Sbjct 61 NREGKRKRSRTGYGKRKNTKRAYVTLAAGSDPIDIFGGSA 100
>gi|333918149|ref|YP_004491730.1| 50S ribosomal protein L23 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480370|gb|AEF38930.1| 50S ribosomal protein L23 [Amycolicicoccus subflavus DQS3-9A1]
Length=104
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/97 (79%), Positives = 85/97 (88%), Gaps = 0/97 (0%)
Query 3 TLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTANR 62
TLADPRDIILAPVISEKSYGL+++ YTFLV PD+NKTQIKIA+EKIF VKV SVNTANR
Sbjct 6 TLADPRDIILAPVISEKSYGLIEEGTYTFLVHPDANKTQIKIAIEKIFGVKVVSVNTANR 65
Query 63 QGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAP 99
QGK+KRTR G+GKRK TKRA VTL S+PI+LFG P
Sbjct 66 QGKKKRTRFGFGKRKDTKRAFVTLTADSKPIELFGGP 102
>gi|300782610|ref|YP_003762901.1| 50S ribosomal protein L23 [Amycolatopsis mediterranei U32]
gi|299792124|gb|ADJ42499.1| large subunit ribosomal protein L23 [Amycolatopsis mediterranei
U32]
gi|340523981|gb|AEK39186.1| 50S ribosomal protein L23 [Amycolatopsis mediterranei S699]
Length=103
Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/101 (77%), Positives = 91/101 (91%), Gaps = 2/101 (1%)
Query 1 MATLA--DPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVN 58
M+++A DPRDI+LAPVISEKSYGLL+D+ YTF+VRPD+NKTQIKIAVEK+F VKV SVN
Sbjct 1 MSSVAIPDPRDILLAPVISEKSYGLLEDHKYTFIVRPDANKTQIKIAVEKVFGVKVVSVN 60
Query 59 TANRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAP 99
TANRQGKRKRTR G+GKRK TKRAIVTL+P S+ I++FG P
Sbjct 61 TANRQGKRKRTRAGFGKRKDTKRAIVTLSPESKAIEIFGGP 101
>gi|237786393|ref|YP_002907098.1| 50S ribosomal protein L23 [Corynebacterium kroppenstedtii DSM
44385]
gi|259646270|sp|C4LL50.1|RL23_CORK4 RecName: Full=50S ribosomal protein L23
gi|237759305|gb|ACR18555.1| 50S ribosomal protein L23 [Corynebacterium kroppenstedtii DSM
44385]
Length=101
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 87/100 (87%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M+ L +PRDII+APV+SEKSYGL++ YTFLVRPDSNKTQIKIAVEKIF VKV+SVNT
Sbjct 1 MSDLNNPRDIIIAPVVSEKSYGLMEQGTYTFLVRPDSNKTQIKIAVEKIFGVKVSSVNTL 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR+GK KRTR GYG+RKSTKRA+VTLA GS PID+FG A
Sbjct 61 NREGKTKRTRFGYGRRKSTKRAMVTLAAGSDPIDIFGGSA 100
>gi|319948721|ref|ZP_08022842.1| 50S ribosomal protein L23 [Dietzia cinnamea P4]
gi|319437623|gb|EFV92622.1| 50S ribosomal protein L23 [Dietzia cinnamea P4]
Length=100
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/100 (75%), Positives = 89/100 (89%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M+T+ADPRD+ILAPV+SEK+YGLL+ VYTFLV PD+NKTQIKIA+++IF V V SVNTA
Sbjct 1 MSTVADPRDVILAPVVSEKAYGLLEQGVYTFLVAPDANKTQIKIAIQEIFGVTVESVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NRQGKRKRTRTGYG+RKSTKRAIVTLA S+PI++ G A
Sbjct 61 NRQGKRKRTRTGYGQRKSTKRAIVTLAADSKPIEIPGLTA 100
>gi|256380596|ref|YP_003104256.1| 50S ribosomal protein L23 [Actinosynnema mirum DSM 43827]
gi|255924899|gb|ACU40410.1| Ribosomal protein L25/L23 [Actinosynnema mirum DSM 43827]
Length=99
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/97 (78%), Positives = 85/97 (88%), Gaps = 0/97 (0%)
Query 4 LADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTANRQ 63
+ D RDI+LAPVISEKSYGLL++N YTFLV P SNKTQIKIAVEK+F VKV SVNT NRQ
Sbjct 2 IPDHRDILLAPVISEKSYGLLEENKYTFLVSPGSNKTQIKIAVEKVFGVKVVSVNTINRQ 61
Query 64 GKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
GKRKRT+TGYGKRK TKRAIVTL+ S+PI++FG PA
Sbjct 62 GKRKRTKTGYGKRKDTKRAIVTLSAESKPIEIFGGPA 98
>gi|227832221|ref|YP_002833928.1| 50S ribosomal protein L23 [Corynebacterium aurimucosum ATCC 700975]
gi|262183924|ref|ZP_06043345.1| 50S ribosomal protein L23 [Corynebacterium aurimucosum ATCC 700975]
gi|254800494|sp|C3PKQ4.1|RL23_CORA7 RecName: Full=50S ribosomal protein L23
gi|227453237|gb|ACP31990.1| 50S ribosomal protein L23 [Corynebacterium aurimucosum ATCC 700975]
Length=100
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 85/100 (85%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MA LA+PRD+I+APV+SEKSYGL++ NVYTF V DSNKTQIK AVE+IF VKVASVNT
Sbjct 1 MAKLANPRDVIIAPVVSEKSYGLMEQNVYTFYVSTDSNKTQIKDAVEQIFGVKVASVNTV 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR GKRKRTRTGYG+RKSTKRA VTL GS ID+FGA A
Sbjct 61 NRAGKRKRTRTGYGQRKSTKRAYVTLREGSDSIDVFGAGA 100
>gi|257054472|ref|YP_003132304.1| 50S ribosomal protein L23 [Saccharomonospora viridis DSM 43017]
gi|256584344|gb|ACU95477.1| LSU ribosomal protein L23P [Saccharomonospora viridis DSM 43017]
Length=103
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/102 (75%), Positives = 90/102 (89%), Gaps = 2/102 (1%)
Query 1 MATLA--DPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVN 58
M+++A DPRD+++APVISEKSYGLLDD+ YTFLVRPD+NKT+IKIAVEKIF VKV SVN
Sbjct 1 MSSVAIPDPRDVLIAPVISEKSYGLLDDHKYTFLVRPDANKTEIKIAVEKIFGVKVISVN 60
Query 59 TANRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
T NR GKRKRTR G+GKRK TKRAIVTL+ S+PI++FG PA
Sbjct 61 TLNRPGKRKRTRHGFGKRKDTKRAIVTLSAESKPIEIFGGPA 102
>gi|296141113|ref|YP_003648356.1| 50S ribosomal protein L25/L23 [Tsukamurella paurometabola DSM
20162]
gi|296029247|gb|ADG80017.1| Ribosomal protein L25/L23 [Tsukamurella paurometabola DSM 20162]
Length=103
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/94 (77%), Positives = 84/94 (90%), Gaps = 0/94 (0%)
Query 5 ADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTANRQG 64
ADPRDI+LAPVISEK+YGL++DN YTFLV PD+NKTQIKIAVE++F VKV +VNT NR G
Sbjct 8 ADPRDILLAPVISEKAYGLIEDNTYTFLVHPDANKTQIKIAVEQVFGVKVVNVNTLNRTG 67
Query 65 KRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGA 98
KRKRTR GYG+RKSTKRAIVTL+ S+PID+FG
Sbjct 68 KRKRTRAGYGQRKSTKRAIVTLSADSKPIDIFGG 101
>gi|300857764|ref|YP_003782747.1| 50S ribosomal protein L23 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685218|gb|ADK28140.1| 50S ribosomal protein L23 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205502|gb|ADL09844.1| 50S ribosomal protein L23 [Corynebacterium pseudotuberculosis
C231]
gi|302330057|gb|ADL20251.1| 50S ribosomal protein L23 [Corynebacterium pseudotuberculosis
1002]
gi|308275738|gb|ADO25637.1| 50S ribosomal protein L23 [Corynebacterium pseudotuberculosis
I19]
gi|341824164|gb|AEK91685.1| 50S ribosomal protein L23 [Corynebacterium pseudotuberculosis
PAT10]
Length=101
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 84/100 (84%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MA +ADPRDIILAPV+SEKSYGL++ N Y F V P +NKT+IKIA+E+IF VKVASVNTA
Sbjct 1 MAKIADPRDIILAPVVSEKSYGLMEQNTYVFFVSPSANKTEIKIAIEQIFGVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR+GKRKRTR+GYG RK+TKRA VTL GS ID+FG A
Sbjct 61 NREGKRKRTRSGYGVRKATKRAYVTLREGSDAIDIFGGSA 100
>gi|337290017|ref|YP_004629038.1| 50S ribosomal protein L23 [Corynebacterium ulcerans BR-AD22]
gi|334696140|gb|AEG80937.1| 50S ribosomal protein L23 [Corynebacterium ulcerans 809]
gi|334698323|gb|AEG83119.1| 50S ribosomal protein L23 [Corynebacterium ulcerans BR-AD22]
Length=101
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 84/100 (84%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MA +ADPRDIILAPV+SEKSYGL++ N Y F V P +NKT+IKIA+E+IF VKVASVNTA
Sbjct 1 MAKIADPRDIILAPVVSEKSYGLMEQNTYVFFVAPSANKTEIKIAIEQIFGVKVASVNTA 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR+GKRKRTR+GYG RK+TKRA VTL GS ID+FG A
Sbjct 61 NREGKRKRTRSGYGVRKATKRAYVTLREGSDAIDIFGGSA 100
>gi|331699174|ref|YP_004335413.1| 50S ribosomal protein L25/L23 [Pseudonocardia dioxanivorans CB1190]
gi|326953863|gb|AEA27560.1| Ribosomal protein L25/L23 [Pseudonocardia dioxanivorans CB1190]
Length=99
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/97 (77%), Positives = 85/97 (88%), Gaps = 0/97 (0%)
Query 4 LADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTANRQ 63
+ADPRDI+LAPV+SEKSYGLLD+ YTF+VRPD+NKTQIKIAVEK+F VKV SVNT NR
Sbjct 2 IADPRDILLAPVVSEKSYGLLDERQYTFVVRPDANKTQIKIAVEKVFGVKVLSVNTLNRP 61
Query 64 GKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
GKRKR+RTGYGKRK TKRAIVTL+ S+ ID+FG A
Sbjct 62 GKRKRSRTGYGKRKDTKRAIVTLSEDSKAIDVFGGRA 98
>gi|227502656|ref|ZP_03932705.1| 50S ribosomal protein L23 [Corynebacterium accolens ATCC 49725]
gi|306835221|ref|ZP_07468255.1| 50S ribosomal protein L23 [Corynebacterium accolens ATCC 49726]
gi|227076386|gb|EEI14349.1| 50S ribosomal protein L23 [Corynebacterium accolens ATCC 49725]
gi|304568901|gb|EFM44432.1| 50S ribosomal protein L23 [Corynebacterium accolens ATCC 49726]
Length=100
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 85/100 (85%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MA +++PRD+I+APV+SEKSYGL++ NVYTF V PDSNK+QIK AVE+IF VKV SVNT
Sbjct 1 MAKISNPRDVIIAPVVSEKSYGLMEQNVYTFFVSPDSNKSQIKDAVEQIFDVKVDSVNTV 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR GKRKRTRTG+G+RKSTKRA VTL GS ID+FGA A
Sbjct 61 NRAGKRKRTRTGFGQRKSTKRAYVTLREGSDSIDVFGAGA 100
>gi|255324738|ref|ZP_05365852.1| ribosomal protein L23 [Corynebacterium tuberculostearicum SK141]
gi|311740075|ref|ZP_07713909.1| 50S ribosomal protein L23 [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298213|gb|EET77516.1| ribosomal protein L23 [Corynebacterium tuberculostearicum SK141]
gi|311305148|gb|EFQ81217.1| 50S ribosomal protein L23 [Corynebacterium pseudogenitalium ATCC
33035]
Length=100
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/100 (73%), Positives = 84/100 (84%), Gaps = 0/100 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MA +++PRDII+APV+SEKSYGL++ NVYTF V DSNK+QIK AVE+IF VKV SVNT
Sbjct 1 MAKISNPRDIIIAPVVSEKSYGLMEQNVYTFYVSTDSNKSQIKDAVEQIFDVKVDSVNTV 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR GKRKRTRTGYG+RKSTKRA VTL GS ID+FGA A
Sbjct 61 NRAGKRKRTRTGYGQRKSTKRAYVTLREGSDSIDVFGAQA 100
>gi|269128514|ref|YP_003301884.1| 50S ribosomal protein L25/L23 [Thermomonospora curvata DSM 43183]
gi|268313472|gb|ACY99846.1| Ribosomal protein L25/L23 [Thermomonospora curvata DSM 43183]
Length=99
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
M+ +ADPRDII+APV+SEKSYGLLD+N YTFLVRPD+NK QI+ AVE++F VKV SVNT
Sbjct 1 MSKIADPRDIIIAPVVSEKSYGLLDENKYTFLVRPDANKVQIRQAVEQVFGVKVTSVNTI 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
NR+GKRKRTR GYGKRK TKRAIV LA G R ID+FG A
Sbjct 61 NRKGKRKRTRFGYGKRKDTKRAIVALAEGDR-IDIFGPTA 99
>gi|25027080|ref|NP_737134.1| 50S ribosomal protein L23 [Corynebacterium efficiens YS-314]
gi|259506791|ref|ZP_05749691.1| 50S ribosomal protein L23 [Corynebacterium efficiens YS-314]
gi|81846903|sp|Q8FS78.1|RL23_COREF RecName: Full=50S ribosomal protein L23
gi|23492360|dbj|BAC17334.1| putative 50S ribosomal protein L23 [Corynebacterium efficiens
YS-314]
gi|259165662|gb|EEW50216.1| 50S ribosomal protein L23 [Corynebacterium efficiens YS-314]
Length=101
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/96 (74%), Positives = 84/96 (88%), Gaps = 0/96 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+A+PRDIILAPV+SEKSYGL++ NVYTF V D+NKTQIKIAVE+IF VKVASVNT
Sbjct 1 MATIANPRDIILAPVVSEKSYGLMEQNVYTFFVARDANKTQIKIAVEEIFGVKVASVNTV 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLF 96
NR+GKRKR+R+G+G RK+TKRA VTL GS ID+F
Sbjct 61 NREGKRKRSRSGFGVRKATKRAYVTLREGSDSIDIF 96
>gi|117927517|ref|YP_872068.1| 50S ribosomal protein L23P [Acidothermus cellulolyticus 11B]
gi|171460807|sp|A0LRM2.1|RL23_ACIC1 RecName: Full=50S ribosomal protein L23
gi|117647980|gb|ABK52082.1| LSU ribosomal protein L23P [Acidothermus cellulolyticus 11B]
Length=98
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/96 (77%), Positives = 84/96 (88%), Gaps = 1/96 (1%)
Query 5 ADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTANRQG 64
+DPRD++LAPVISEKSYGLLD N YTFLV P+SNKTQIKIAVEK+F V+V VNT NRQG
Sbjct 3 SDPRDVLLAPVISEKSYGLLDQNKYTFLVPPESNKTQIKIAVEKVFNVRVLDVNTINRQG 62
Query 65 KRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
KRKRTR G+G+RK+TKRAIVT+APG R ID+FG P
Sbjct 63 KRKRTRRGWGQRKNTKRAIVTVAPGDR-IDIFGPPV 97
>gi|19551748|ref|NP_599750.1| 50S ribosomal protein L23 [Corynebacterium glutamicum ATCC 13032]
gi|62389403|ref|YP_224805.1| 50S ribosomal protein L23 [Corynebacterium glutamicum ATCC 13032]
gi|145294660|ref|YP_001137481.1| 50S ribosomal protein L23 [Corynebacterium glutamicum R]
6 more sequence titles
Length=101
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/96 (73%), Positives = 83/96 (87%), Gaps = 0/96 (0%)
Query 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTA 60
MAT+A+PRDII+APV+SEKSYGL++ NVYTF V D+NKTQIKIA+E+IF VKVASVNT
Sbjct 1 MATIANPRDIIIAPVVSEKSYGLMEQNVYTFFVSTDANKTQIKIAIEEIFGVKVASVNTV 60
Query 61 NRQGKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLF 96
NR GKRKR+RTG+G RK+TKRA VTL GS ID+F
Sbjct 61 NRAGKRKRSRTGFGTRKATKRAYVTLREGSDSIDIF 96
>gi|172039997|ref|YP_001799711.1| 50S ribosomal protein L23 [Corynebacterium urealyticum DSM 7109]
gi|171851301|emb|CAQ04277.1| 50S ribosomal protein L23 [Corynebacterium urealyticum DSM 7109]
Length=102
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/95 (74%), Positives = 83/95 (88%), Gaps = 0/95 (0%)
Query 4 LADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTANRQ 63
+ DPRD+I+APV+SEKSY L++ NVYTFLV P SNKTQIKIAVE+IF VKVASVNTANR+
Sbjct 5 VVDPRDVIIAPVVSEKSYALMERNVYTFLVAPTSNKTQIKIAVEQIFGVKVASVNTANRE 64
Query 64 GKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGA 98
GK KR+R GYG+RK+TKRA+VTL GS PID+FG
Sbjct 65 GKLKRSRYGYGRRKATKRAMVTLVAGSDPIDIFGG 99
>gi|325000490|ref|ZP_08121602.1| 50S ribosomal protein L23 [Pseudonocardia sp. P1]
Length=99
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/97 (74%), Positives = 83/97 (86%), Gaps = 0/97 (0%)
Query 4 LADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIFAVKVASVNTANRQ 63
+ DPRD++LAPV+SEKSYGLLD+ YTF+V PD+NKTQIKIAVEK+F VKV SVNT NR
Sbjct 2 ITDPRDVLLAPVVSEKSYGLLDERQYTFVVAPDANKTQIKIAVEKVFGVKVTSVNTLNRP 61
Query 64 GKRKRTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
GKRKR+RTGYGKRK TKRAIVTL+ S+ ID+FG A
Sbjct 62 GKRKRSRTGYGKRKDTKRAIVTLSEESKAIDVFGGQA 98
Lambda K H
0.318 0.134 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129239199826
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40