BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0709 Length=77 Score E Sequences producing significant alignments: (Bits) Value gi|15607849|ref|NP_215223.1| 50S ribosomal protein L29 [Mycobact... 151 3e-35 gi|296168565|ref|ZP_06850369.1| 50S ribosomal protein L29 [Mycob... 146 1e-33 gi|254820465|ref|ZP_05225466.1| 50S ribosomal protein L29 [Mycob... 145 2e-33 gi|41410267|ref|NP_963103.1| 50S ribosomal protein L29 [Mycobact... 144 5e-33 gi|15827994|ref|NP_302257.1| 50S ribosomal protein L29 [Mycobact... 137 6e-31 gi|3122714|sp|O32989.1|RL29_MYCLE RecName: Full=50S ribosomal pr... 137 8e-31 gi|108797994|ref|YP_638191.1| 50S ribosomal protein L29 [Mycobac... 137 8e-31 gi|118471307|ref|YP_885827.1| 50S ribosomal protein L29 [Mycobac... 135 3e-30 gi|240167711|ref|ZP_04746370.1| 50S ribosomal protein L29 [Mycob... 133 8e-30 gi|333991970|ref|YP_004524584.1| 50S ribosomal protein L29 RpmC ... 130 6e-29 gi|120402324|ref|YP_952153.1| 50S ribosomal protein L29 [Mycobac... 128 3e-28 gi|145225617|ref|YP_001136295.1| 50S ribosomal protein L29 [Myco... 126 9e-28 gi|262203616|ref|YP_003274824.1| 50S ribosomal protein L29 [Gord... 125 1e-27 gi|169630892|ref|YP_001704541.1| 50S ribosomal protein L29 [Myco... 125 3e-27 gi|326385091|ref|ZP_08206761.1| 50S ribosomal protein L29 [Gordo... 122 1e-26 gi|343927775|ref|ZP_08767243.1| 50S ribosomal protein L29 [Gordo... 122 2e-26 gi|226305349|ref|YP_002765307.1| 50S ribosomal protein L29 [Rhod... 120 6e-26 gi|2113874|emb|CAA73680.1| rpmC [Mycobacterium bovis BCG] 119 1e-25 gi|333918155|ref|YP_004491736.1| 50S ribosomal protein L29 [Amyc... 116 1e-24 gi|331699168|ref|YP_004335407.1| 50S ribosomal protein L29 [Pseu... 114 7e-24 gi|342861799|ref|ZP_08718444.1| 50S ribosomal protein L29 [Mycob... 113 8e-24 gi|257054478|ref|YP_003132310.1| 50S ribosomal protein L29P [Sac... 113 1e-23 gi|172040003|ref|YP_001799717.1| 50S ribosomal protein L29 [Cory... 113 1e-23 gi|336326431|ref|YP_004606397.1| 50S ribosomal protein L29 [Cory... 111 4e-23 gi|284992866|ref|YP_003411420.1| 50S ribosomal protein L29 [Geod... 110 9e-23 gi|312140910|ref|YP_004008246.1| 50S ribosomal protein l29 rpmc ... 110 1e-22 gi|118616579|ref|YP_904911.1| 50S ribosomal protein L29 [Mycobac... 109 1e-22 gi|296141107|ref|YP_003648350.1| 50S ribosomal protein L29 [Tsuk... 109 2e-22 gi|302524001|ref|ZP_07276343.1| ribosomal protein L29 [Streptomy... 108 3e-22 gi|300782616|ref|YP_003762907.1| 50S ribosomal protein L29 [Amyc... 107 5e-22 gi|258651371|ref|YP_003200527.1| 50S ribosomal protein L29 [Naka... 106 9e-22 gi|291298718|ref|YP_003509996.1| 50S ribosomal protein L29 [Stac... 106 1e-21 gi|319948715|ref|ZP_08022836.1| ribosomal protein L29 [Dietzia c... 106 1e-21 gi|324999228|ref|ZP_08120340.1| 50S ribosomal protein L29 [Pseud... 106 1e-21 gi|334564064|ref|ZP_08517055.1| 50S ribosomal protein L29 [Coryn... 106 1e-21 gi|340795341|ref|YP_004760804.1| 50S ribosomal protein L29 [Cory... 105 2e-21 gi|68536915|ref|YP_251620.1| 50S ribosomal protein L29 [Coryneba... 105 2e-21 gi|54022708|ref|YP_116950.1| 50S ribosomal protein L29 [Nocardia... 104 4e-21 gi|25027086|ref|NP_737140.1| 50S ribosomal protein L29 [Coryneba... 104 5e-21 gi|19551754|ref|NP_599756.1| 50S ribosomal protein L29 [Coryneba... 104 5e-21 gi|111023104|ref|YP_706076.1| 50S ribosomal protein L29 [Rhodoco... 103 6e-21 gi|213964855|ref|ZP_03393054.1| ribosomal protein L29 [Corynebac... 103 6e-21 gi|227549834|ref|ZP_03979883.1| 50S ribosomal protein L29 [Coryn... 103 8e-21 gi|312200012|ref|YP_004020073.1| ribosomal protein L29 [Frankia ... 101 4e-20 gi|227487115|ref|ZP_03917431.1| ribosomal protein L29 [Corynebac... 101 4e-20 gi|225020394|ref|ZP_03709586.1| hypothetical protein CORMATOL_00... 100 7e-20 gi|237786387|ref|YP_002907092.1| 50S ribosomal protein L29 [Cory... 100 8e-20 gi|300779837|ref|ZP_07089693.1| 50S ribosomal protein L29 [Coryn... 100 1e-19 gi|38233093|ref|NP_938860.1| 50S ribosomal protein L29 [Coryneba... 99.8 1e-19 gi|255324744|ref|ZP_05365858.1| ribosomal protein L29 [Corynebac... 98.6 3e-19 >gi|15607849|ref|NP_215223.1| 50S ribosomal protein L29 [Mycobacterium tuberculosis H37Rv] gi|15840116|ref|NP_335153.1| 50S ribosomal protein L29 [Mycobacterium tuberculosis CDC1551] gi|31791894|ref|NP_854387.1| 50S ribosomal protein L29 [Mycobacterium bovis AF2122/97] 83 more sequence titles Length=77 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV Sbjct 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLATGPDGKES Sbjct 61 LRERELGLATGPDGKES 77 >gi|296168565|ref|ZP_06850369.1| 50S ribosomal protein L29 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896628|gb|EFG76267.1| 50S ribosomal protein L29 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=77 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 72/77 (94%), Positives = 77/77 (100%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG+SPGELRELTD+ELAERLRESKEELFNLRFQMATGQL+NNRRLRTVRQEIAR+YTV Sbjct 1 MAVGISPGELRELTDDELAERLRESKEELFNLRFQMATGQLSNNRRLRTVRQEIARVYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA+GPDGKES Sbjct 61 LRERELGLASGPDGKES 77 >gi|254820465|ref|ZP_05225466.1| 50S ribosomal protein L29 [Mycobacterium intracellulare ATCC 13950] Length=77 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 72/77 (94%), Positives = 75/77 (98%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG+SPGELRELTDEEL ERLRESKEELFNLRFQMATGQL NNRRLRTVRQEIAR+YTV Sbjct 1 MAVGISPGELRELTDEELTERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA+GPDGKES Sbjct 61 LRERELGLASGPDGKES 77 >gi|41410267|ref|NP_963103.1| 50S ribosomal protein L29 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463930|ref|YP_883598.1| 50S ribosomal protein L29 [Mycobacterium avium 104] gi|254776899|ref|ZP_05218415.1| 50S ribosomal protein L29 [Mycobacterium avium subsp. avium ATCC 25291] gi|81570785|sp|Q73SA6.1|RL29_MYCPA RecName: Full=50S ribosomal protein L29 gi|166228227|sp|A0QL10.1|RL29_MYCA1 RecName: Full=50S ribosomal protein L29 gi|41399101|gb|AAS06719.1| RpmC [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165217|gb|ABK66114.1| ribosomal protein L29 [Mycobacterium avium 104] gi|336460660|gb|EGO39551.1| ribosomal protein L29 [Mycobacterium avium subsp. paratuberculosis S397] Length=77 Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 71/77 (93%), Positives = 75/77 (98%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG+SPGELRELTD+EL ERLRESKEELFNLRFQMATGQL NNRRLRTVRQEIAR+YTV Sbjct 1 MAVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA+GPDGKES Sbjct 61 LRERELGLASGPDGKES 77 >gi|15827994|ref|NP_302257.1| 50S ribosomal protein L29 [Mycobacterium leprae TN] gi|221230471|ref|YP_002503887.1| 50S ribosomal protein L29 [Mycobacterium leprae Br4923] gi|13093547|emb|CAC30809.1| 50S ribosomal protein L29 [Mycobacterium leprae] gi|219933578|emb|CAR71951.1| 50S ribosomal protein L29 [Mycobacterium leprae Br4923] Length=81 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 68/74 (92%), Positives = 71/74 (96%), Gaps = 0/74 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG+SPGELRELTDEEL ERLRESKEELFNLRFQMATGQLNNNRRLRTVR EIAR+YTV Sbjct 2 MAVGISPGELRELTDEELIERLRESKEELFNLRFQMATGQLNNNRRLRTVRHEIARVYTV 61 Query 61 LRERELGLATGPDG 74 LRERELGLA+GP G Sbjct 62 LRERELGLASGPGG 75 >gi|3122714|sp|O32989.1|RL29_MYCLE RecName: Full=50S ribosomal protein L29 gi|2344840|emb|CAB11442.1| ribosomal protein L29 [Mycobacterium leprae] Length=80 Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 68/74 (92%), Positives = 71/74 (96%), Gaps = 0/74 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG+SPGELRELTDEEL ERLRESKEELFNLRFQMATGQLNNNRRLRTVR EIAR+YTV Sbjct 1 MAVGISPGELRELTDEELIERLRESKEELFNLRFQMATGQLNNNRRLRTVRHEIARVYTV 60 Query 61 LRERELGLATGPDG 74 LRERELGLA+GP G Sbjct 61 LRERELGLASGPGG 74 >gi|108797994|ref|YP_638191.1| 50S ribosomal protein L29 [Mycobacterium sp. MCS] gi|119867090|ref|YP_937042.1| 50S ribosomal protein L29 [Mycobacterium sp. KMS] gi|126433656|ref|YP_001069347.1| 50S ribosomal protein L29 [Mycobacterium sp. JLS] 6 more sequence titles Length=77 Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 68/77 (89%), Positives = 74/77 (97%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVGVSPGELREL+D+EL ERLRESKEELFNLRFQMATGQL+NNRRLR VRQEIAR+YTV Sbjct 1 MAVGVSPGELRELSDDELIERLRESKEELFNLRFQMATGQLSNNRRLRVVRQEIARVYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA+GP G+ES Sbjct 61 LRERELGLASGPAGEES 77 >gi|118471307|ref|YP_885827.1| 50S ribosomal protein L29 [Mycobacterium smegmatis str. MC2 155] gi|166228229|sp|A0QSD9.1|RL29_MYCS2 RecName: Full=50S ribosomal protein L29 gi|118172594|gb|ABK73490.1| ribosomal protein L29 [Mycobacterium smegmatis str. MC2 155] Length=77 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/77 (86%), Positives = 74/77 (97%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG +PGELRELTD+EL ++LRESKEELFNLRFQMATGQL+NNRRLRTVRQEIAR+YTV Sbjct 1 MAVGTTPGELRELTDDELKDKLRESKEELFNLRFQMATGQLSNNRRLRTVRQEIARVYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA+GP G+ES Sbjct 61 LRERELGLASGPAGEES 77 >gi|240167711|ref|ZP_04746370.1| 50S ribosomal protein L29 [Mycobacterium kansasii ATCC 12478] Length=83 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 67/77 (88%), Positives = 72/77 (94%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG+SPGELRELTDEEL ERLRE+K ELFNLRFQMATGQLNN RRLRTVR+EIAR+YTV Sbjct 1 MAVGISPGELRELTDEELTERLREAKGELFNLRFQMATGQLNNIRRLRTVRREIARVYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA+GPDG E Sbjct 61 LRERELGLASGPDGPEG 77 >gi|333991970|ref|YP_004524584.1| 50S ribosomal protein L29 RpmC [Mycobacterium sp. JDM601] gi|333487938|gb|AEF37330.1| 50S ribosomal protein L29 RpmC [Mycobacterium sp. JDM601] Length=80 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 65/76 (86%), Positives = 70/76 (93%), Gaps = 0/76 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVGV+ GELREL +EL ERLRESKEELFNLRFQMATGQL+NNRRLRTVR +IARIYTV Sbjct 1 MAVGVTAGELRELNADELVERLRESKEELFNLRFQMATGQLSNNRRLRTVRHQIARIYTV 60 Query 61 LRERELGLATGPDGKE 76 LRERELGLA+GPDG E Sbjct 61 LRERELGLASGPDGSE 76 >gi|120402324|ref|YP_952153.1| 50S ribosomal protein L29 [Mycobacterium vanbaalenii PYR-1] gi|166228234|sp|A1T4P7.1|RL29_MYCVP RecName: Full=50S ribosomal protein L29 gi|119955142|gb|ABM12147.1| LSU ribosomal protein L29P [Mycobacterium vanbaalenii PYR-1] Length=77 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/77 (84%), Positives = 70/77 (91%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG + GELRELTDEEL ++LRESKEELFNLRFQMATGQL NNRRLR VRQEIAR+YTV Sbjct 1 MAVGTTTGELRELTDEELTDKLRESKEELFNLRFQMATGQLANNRRLRVVRQEIARLYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA GP G++S Sbjct 61 LRERELGLAAGPGGEDS 77 >gi|145225617|ref|YP_001136295.1| 50S ribosomal protein L29 [Mycobacterium gilvum PYR-GCK] gi|315445970|ref|YP_004078849.1| 50S ribosomal protein L29P [Mycobacterium sp. Spyr1] gi|189042539|sp|A4TEB6.1|RL29_MYCGI RecName: Full=50S ribosomal protein L29 gi|145218103|gb|ABP47507.1| LSU ribosomal protein L29P [Mycobacterium gilvum PYR-GCK] gi|315264273|gb|ADU01015.1| LSU ribosomal protein L29P [Mycobacterium sp. Spyr1] Length=77 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 62/77 (81%), Positives = 70/77 (91%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG + GELREL+D+EL ++LRESKEELFNLRFQMATGQL NNRRLR VRQEIAR+YTV Sbjct 1 MAVGTTTGELRELSDDELTDKLRESKEELFNLRFQMATGQLANNRRLRVVRQEIARVYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA GP G++S Sbjct 61 LRERELGLAAGPGGEDS 77 >gi|262203616|ref|YP_003274824.1| 50S ribosomal protein L29 [Gordonia bronchialis DSM 43247] gi|262086963|gb|ACY22931.1| ribosomal protein L29 [Gordonia bronchialis DSM 43247] Length=77 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/77 (78%), Positives = 71/77 (93%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA+GV+ ELREL D +L +RL+ESKEELFNLRFQMATGQL+NNRRLRTVR+EIARIYTV Sbjct 1 MALGVAANELRELNDADLVDRLKESKEELFNLRFQMATGQLDNNRRLRTVRREIARIYTV 60 Query 61 LRERELGLATGPDGKES 77 +RERELGLA+GPDG ++ Sbjct 61 MRERELGLASGPDGDDA 77 >gi|169630892|ref|YP_001704541.1| 50S ribosomal protein L29 [Mycobacterium abscessus ATCC 19977] gi|226699263|sp|B1MGE2.1|RL29_MYCA9 RecName: Full=50S ribosomal protein L29 gi|169242859|emb|CAM63887.1| 50S ribosomal protein L29 [Mycobacterium abscessus] Length=78 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/77 (81%), Positives = 68/77 (89%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 M VG+S GELRE T+EEL +LRESKEELFNLRFQMATGQL NNRRLR VRQEIARIYTV Sbjct 1 MTVGISAGELRESTEEELITKLRESKEELFNLRFQMATGQLANNRRLRAVRQEIARIYTV 60 Query 61 LRERELGLATGPDGKES 77 +RERELGLA GPD ++S Sbjct 61 MRERELGLAAGPDSEDS 77 >gi|326385091|ref|ZP_08206761.1| 50S ribosomal protein L29 [Gordonia neofelifaecis NRRL B-59395] gi|326196176|gb|EGD53380.1| 50S ribosomal protein L29 [Gordonia neofelifaecis NRRL B-59395] Length=77 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 58/77 (76%), Positives = 72/77 (94%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA+GV+ ELREL+D +L RL+ESKEELFNLRFQMATGQL+NNRRLRTVR+EIAR+YTV Sbjct 1 MALGVAASELRELSDTDLVARLKESKEELFNLRFQMATGQLDNNRRLRTVRREIARVYTV 60 Query 61 LRERELGLATGPDGKES 77 +RERELGLA+GP+G+++ Sbjct 61 MRERELGLASGPEGEDA 77 >gi|343927775|ref|ZP_08767243.1| 50S ribosomal protein L29 [Gordonia alkanivorans NBRC 16433] gi|343762416|dbj|GAA14169.1| 50S ribosomal protein L29 [Gordonia alkanivorans NBRC 16433] Length=77 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/77 (76%), Positives = 72/77 (94%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 M++GV+ ELREL D +L +RL+ESKEELFNLRFQMATGQL+NNRRLRTVR+EIARIYTV Sbjct 1 MSLGVAANELRELNDADLVDRLKESKEELFNLRFQMATGQLDNNRRLRTVRREIARIYTV 60 Query 61 LRERELGLATGPDGKES 77 +RERELGLA+GP+G+++ Sbjct 61 MRERELGLASGPEGEDA 77 >gi|226305349|ref|YP_002765307.1| 50S ribosomal protein L29 [Rhodococcus erythropolis PR4] gi|229489377|ref|ZP_04383240.1| ribosomal protein L29 [Rhodococcus erythropolis SK121] gi|259646774|sp|C0ZW33.1|RL29_RHOE4 RecName: Full=50S ribosomal protein L29 gi|226184464|dbj|BAH32568.1| 50S ribosomal protein L29 [Rhodococcus erythropolis PR4] gi|229323474|gb|EEN89232.1| ribosomal protein L29 [Rhodococcus erythropolis SK121] Length=78 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/77 (77%), Positives = 66/77 (86%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G ELREL+++EL RLRESKEELFNLRFQMATGQ++NNRRLRTVR EIARIYTV Sbjct 1 MATGTPAAELRELSEDELVTRLRESKEELFNLRFQMATGQMDNNRRLRTVRHEIARIYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA GPD ++ Sbjct 61 LRERELGLAVGPDAGDA 77 >gi|2113874|emb|CAA73680.1| rpmC [Mycobacterium bovis BCG] Length=75 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/60 (100%), Positives = 60/60 (100%), Gaps = 0/60 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV Sbjct 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 >gi|333918155|ref|YP_004491736.1| 50S ribosomal protein L29 [Amycolicicoccus subflavus DQS3-9A1] gi|333480376|gb|AEF38936.1| 50S ribosomal protein L29 [Amycolicicoccus subflavus DQS3-9A1] Length=81 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/73 (80%), Positives = 64/73 (88%), Gaps = 0/73 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G ELREL+ EEL ERLRE+KEELFNLRFQMATGQL+NNRRL TVR++IARIYTV Sbjct 1 MATGTKASELRELSKEELVERLREAKEELFNLRFQMATGQLDNNRRLGTVRKDIARIYTV 60 Query 61 LRERELGLATGPD 73 LRERELGLA GP+ Sbjct 61 LRERELGLAAGPE 73 >gi|331699168|ref|YP_004335407.1| 50S ribosomal protein L29 [Pseudonocardia dioxanivorans CB1190] gi|326953857|gb|AEA27554.1| ribosomal protein L29 [Pseudonocardia dioxanivorans CB1190] Length=80 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 55/75 (74%), Positives = 63/75 (84%), Gaps = 0/75 (0%) Query 2 AVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVL 61 + G + ELRELTDEEL R++ESKEELFNLRFQMATGQL+NNRRLRTVR +IARIYTV+ Sbjct 3 SAGTTAAELRELTDEELVLRVKESKEELFNLRFQMATGQLDNNRRLRTVRHDIARIYTVM 62 Query 62 RERELGLATGPDGKE 76 RERELGL+ P E Sbjct 63 RERELGLSAAPTDNE 77 >gi|342861799|ref|ZP_08718444.1| 50S ribosomal protein L29 [Mycobacterium colombiense CECT 3035] gi|342130616|gb|EGT83920.1| 50S ribosomal protein L29 [Mycobacterium colombiense CECT 3035] Length=77 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/77 (94%), Positives = 76/77 (99%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG+SPGELRELT+EELAERLRESKEELFNLRFQMATGQL NNRRLRTVRQEIAR+YTV Sbjct 1 MAVGISPGELRELTEEELAERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA+GPDGKES Sbjct 61 LRERELGLASGPDGKES 77 >gi|257054478|ref|YP_003132310.1| 50S ribosomal protein L29P [Saccharomonospora viridis DSM 43017] gi|256584350|gb|ACU95483.1| LSU ribosomal protein L29P [Saccharomonospora viridis DSM 43017] Length=83 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/76 (77%), Positives = 65/76 (86%), Gaps = 0/76 (0%) Query 2 AVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVL 61 A GV+ ELRELT EEL RL+ESKEELFNLRFQMATGQL+NNRRLRTVR +IARIYTV+ Sbjct 4 AGGVAASELRELTAEELVLRLKESKEELFNLRFQMATGQLDNNRRLRTVRADIARIYTVM 63 Query 62 RERELGLATGPDGKES 77 RERELGL+ P+ ES Sbjct 64 RERELGLSVSPEENES 79 >gi|172040003|ref|YP_001799717.1| 50S ribosomal protein L29 [Corynebacterium urealyticum DSM 7109] gi|226699228|sp|B1VEU4.1|RL29_CORU7 RecName: Full=50S ribosomal protein L29 gi|171851307|emb|CAQ04283.1| 50S ribosomal protein L29 [Corynebacterium urealyticum DSM 7109] Length=77 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/74 (75%), Positives = 63/74 (86%), Gaps = 0/74 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G+ ELREL++EEL RL+ESKEELFNLRFQMATGQL NNRRL V+++IARIYTV Sbjct 1 MATGIPASELRELSNEELTTRLKESKEELFNLRFQMATGQLTNNRRLSVVKKDIARIYTV 60 Query 61 LRERELGLATGPDG 74 LRERELGL+T P G Sbjct 61 LRERELGLSTNPGG 74 >gi|336326431|ref|YP_004606397.1| 50S ribosomal protein L29 [Corynebacterium resistens DSM 45100] gi|336102413|gb|AEI10233.1| 50S ribosomal protein L29 [Corynebacterium resistens DSM 45100] Length=77 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 56/74 (76%), Positives = 63/74 (86%), Gaps = 0/74 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G+ ELRELT+EEL RLRESKEELFNLRFQ ATGQL+NNRRL V+++IARIYTV Sbjct 1 MATGIPASELRELTNEELTTRLRESKEELFNLRFQAATGQLSNNRRLGVVKRDIARIYTV 60 Query 61 LRERELGLATGPDG 74 LRERELGL+T P G Sbjct 61 LRERELGLSTNPGG 74 >gi|284992866|ref|YP_003411420.1| 50S ribosomal protein L29 [Geodermatophilus obscurus DSM 43160] gi|284066111|gb|ADB77049.1| ribosomal protein L29 [Geodermatophilus obscurus DSM 43160] Length=77 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 54/73 (74%), Positives = 65/73 (90%), Gaps = 0/73 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G++ ELREL+ EELA RLRESKEELFNLRFQ+ATGQL+NNRRL+TVR++IARIYT+ Sbjct 1 MAAGLTAPELRELSVEELATRLRESKEELFNLRFQVATGQLDNNRRLQTVRRDIARIYTI 60 Query 61 LRERELGLATGPD 73 +RERELGL+ P Sbjct 61 MRERELGLSVAPS 73 >gi|312140910|ref|YP_004008246.1| 50S ribosomal protein l29 rpmc [Rhodococcus equi 103S] gi|325675452|ref|ZP_08155136.1| 50S ribosomal protein L29 [Rhodococcus equi ATCC 33707] gi|311890249|emb|CBH49567.1| 50S ribosomal protein L29 RpmC [Rhodococcus equi 103S] gi|325553423|gb|EGD23101.1| 50S ribosomal protein L29 [Rhodococcus equi ATCC 33707] Length=78 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/68 (83%), Positives = 59/68 (87%), Gaps = 0/68 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA ELRELTDEEL +LRE+KEELFNLRFQMATGQL+NNRRLRTVR EIARIYTV Sbjct 1 MATTSPAAELRELTDEELVTKLREAKEELFNLRFQMATGQLDNNRRLRTVRHEIARIYTV 60 Query 61 LRERELGL 68 LRERELGL Sbjct 61 LRERELGL 68 >gi|118616579|ref|YP_904911.1| 50S ribosomal protein L29 [Mycobacterium ulcerans Agy99] gi|183981061|ref|YP_001849352.1| 50S ribosomal protein L29, RpmC [Mycobacterium marinum M] gi|166228233|sp|A0PM71.1|RL29_MYCUA RecName: Full=50S ribosomal protein L29 gi|226699265|sp|B2HSN9.1|RL29_MYCMM RecName: Full=50S ribosomal protein L29 gi|118568689|gb|ABL03440.1| 50S ribosomal protein L29, RpmC [Mycobacterium ulcerans Agy99] gi|183174387|gb|ACC39497.1| 50S ribosomal protein L29, RpmC [Mycobacterium marinum M] Length=80 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/80 (90%), Positives = 75/80 (94%), Gaps = 3/80 (3%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MAVG+SPGELRELT+EEL ERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct 1 MAVGISPGELRELTEEELTERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 Query 61 LRERELGLATG---PDGKES 77 LRERELGLA G PDGKES Sbjct 61 LRERELGLAAGPGEPDGKES 80 >gi|296141107|ref|YP_003648350.1| 50S ribosomal protein L29 [Tsukamurella paurometabola DSM 20162] gi|296029241|gb|ADG80011.1| ribosomal protein L29 [Tsukamurella paurometabola DSM 20162] Length=76 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/71 (74%), Positives = 63/71 (89%), Gaps = 0/71 (0%) Query 7 PGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLREREL 66 +LR LT +EL E+LRE+KEELFNLRFQMATGQ++NNRRLRTVR +IARIYT+LREREL Sbjct 6 AADLRGLTADELVEKLREAKEELFNLRFQMATGQMSNNRRLRTVRTDIARIYTILREREL 65 Query 67 GLATGPDGKES 77 GLA+GP+G + Sbjct 66 GLASGPEGDAA 76 >gi|302524001|ref|ZP_07276343.1| ribosomal protein L29 [Streptomyces sp. AA4] gi|302432896|gb|EFL04712.1| ribosomal protein L29 [Streptomyces sp. AA4] Length=81 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/76 (74%), Positives = 63/76 (83%), Gaps = 1/76 (1%) Query 1 MAVGVS-PGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYT 59 MA G + ELRELT EEL RL+E KEELFNLRFQMATGQL+NNRRLRTVR +IARIYT Sbjct 1 MANGAAQASELRELTAEELVLRLKEYKEELFNLRFQMATGQLDNNRRLRTVRTDIARIYT 60 Query 60 VLRERELGLATGPDGK 75 V+RERELGL+ PD + Sbjct 61 VMRERELGLSVAPDAE 76 >gi|300782616|ref|YP_003762907.1| 50S ribosomal protein L29 [Amycolatopsis mediterranei U32] gi|299792130|gb|ADJ42505.1| large subunit ribosomal protein L29 [Amycolatopsis mediterranei U32] gi|340523987|gb|AEK39192.1| 50S ribosomal protein L29 [Amycolatopsis mediterranei S699] Length=82 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 54/74 (73%), Positives = 60/74 (82%), Gaps = 0/74 (0%) Query 2 AVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVL 61 A ELRELT EEL RL+E KEELFNLRFQMATGQL+NNRRLRTVR +IARIYTV+ Sbjct 4 AGAAQASELRELTAEELVLRLKEYKEELFNLRFQMATGQLDNNRRLRTVRTDIARIYTVM 63 Query 62 RERELGLATGPDGK 75 RERELGL+ PD + Sbjct 64 RERELGLSVAPDAE 77 >gi|258651371|ref|YP_003200527.1| 50S ribosomal protein L29 [Nakamurella multipartita DSM 44233] gi|258554596|gb|ACV77538.1| ribosomal protein L29 [Nakamurella multipartita DSM 44233] Length=80 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 50/71 (71%), Positives = 61/71 (86%), Gaps = 0/71 (0%) Query 3 VGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLR 62 + + ELREL +EL RLRE+KEELFNLRFQMATGQ++NNRRLRT++ +IARIYTV+R Sbjct 1 MSTTTAELRELGQDELVLRLREAKEELFNLRFQMATGQMDNNRRLRTIKHDIARIYTVMR 60 Query 63 ERELGLATGPD 73 ERELGL+ GPD Sbjct 61 ERELGLSVGPD 71 >gi|291298718|ref|YP_003509996.1| 50S ribosomal protein L29 [Stackebrandtia nassauensis DSM 44728] gi|290567938|gb|ADD40903.1| ribosomal protein L29 [Stackebrandtia nassauensis DSM 44728] Length=79 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/72 (70%), Positives = 61/72 (85%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G+ ELREL+D+EL RLR+SKEELFNLR Q ATGQL+NNR L+TVR++IARIYT+ Sbjct 1 MAAGIEAAELRELSDDELRTRLRDSKEELFNLRVQSATGQLDNNRHLKTVRRDIARIYTI 60 Query 61 LRERELGLATGP 72 +RERELGL+ P Sbjct 61 MRERELGLSAAP 72 >gi|319948715|ref|ZP_08022836.1| ribosomal protein L29 [Dietzia cinnamea P4] gi|319437617|gb|EFV92616.1| ribosomal protein L29 [Dietzia cinnamea P4] Length=76 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/76 (73%), Positives = 60/76 (79%), Gaps = 1/76 (1%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G + ELREL E L RLRE+KEELFNLRFQMATGQL NNRRLR VR +IARIYTV Sbjct 1 MASGTTAPELRELDAEALTARLREAKEELFNLRFQMATGQLTNNRRLRVVRHDIARIYTV 60 Query 61 LRERELGLATGP-DGK 75 +RERELGL+ P D K Sbjct 61 MRERELGLSAAPGDAK 76 >gi|324999228|ref|ZP_08120340.1| 50S ribosomal protein L29 [Pseudonocardia sp. P1] Length=81 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/66 (76%), Positives = 58/66 (88%), Gaps = 0/66 (0%) Query 7 PGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLREREL 66 ELREL+DEEL R+RE+KEELFNLRFQMATGQL+NNRRLR VR +IAR+YTV+REREL Sbjct 9 AAELRELSDEELVVRVREAKEELFNLRFQMATGQLDNNRRLRAVRHDIARVYTVMREREL 68 Query 67 GLATGP 72 GL+ P Sbjct 69 GLSAAP 74 >gi|334564064|ref|ZP_08517055.1| 50S ribosomal protein L29 [Corynebacterium bovis DSM 20582] Length=77 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/77 (69%), Positives = 61/77 (80%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G+ ELREL D EL RLRE+KEELFNLRFQ ATGQL NNRRL V+++IARIYTV Sbjct 1 MATGIPAHELRELNDAELTTRLREAKEELFNLRFQSATGQLTNNRRLGIVKRDIARIYTV 60 Query 61 LRERELGLATGPDGKES 77 +RERELGL+T P G + Sbjct 61 MRERELGLSTNPGGDAA 77 >gi|340795341|ref|YP_004760804.1| 50S ribosomal protein L29 [Corynebacterium variabile DSM 44702] gi|340535251|gb|AEK37731.1| 50S ribosomal protein L29 [Corynebacterium variabile DSM 44702] Length=77 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 51/74 (69%), Positives = 63/74 (86%), Gaps = 0/74 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G ELR+L+++EL +L+E+KEELFNLRFQ ATGQL NNRRL TV+++IARIYTV Sbjct 1 MATGTPAHELRDLSNDELTTKLKEAKEELFNLRFQNATGQLTNNRRLGTVKRDIARIYTV 60 Query 61 LRERELGLATGPDG 74 LRERELGL+T P+G Sbjct 61 LRERELGLSTAPEG 74 >gi|68536915|ref|YP_251620.1| 50S ribosomal protein L29 [Corynebacterium jeikeium K411] gi|260579259|ref|ZP_05847143.1| 50S ribosomal protein L29 [Corynebacterium jeikeium ATCC 43734] gi|123650227|sp|Q4JT55.1|RL29_CORJK RecName: Full=50S ribosomal protein L29 gi|68264514|emb|CAI38002.1| 50S ribosomal protein L29 [Corynebacterium jeikeium K411] gi|258602611|gb|EEW15904.1| 50S ribosomal protein L29 [Corynebacterium jeikeium ATCC 43734] Length=77 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/77 (71%), Positives = 61/77 (80%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G ELREL +EEL RLRE+KEELFNLRFQ ATGQL NNRRL V+++IARIYTV Sbjct 1 MATGTPAHELRELNNEELTTRLREAKEELFNLRFQAATGQLTNNRRLGVVKRDIARIYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGL+T P G + Sbjct 61 LRERELGLSTNPGGDAA 77 >gi|54022708|ref|YP_116950.1| 50S ribosomal protein L29 [Nocardia farcinica IFM 10152] gi|81603034|sp|Q5Z1V5.1|RL29_NOCFA RecName: Full=50S ribosomal protein L29 gi|54014216|dbj|BAD55586.1| putative ribosomal protein L29 [Nocardia farcinica IFM 10152] Length=79 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/75 (83%), Positives = 65/75 (87%), Gaps = 0/75 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G ELRELT+EEL RLRESKEELFNLRFQMATGQL+NNRRLR VR EIARIYTV Sbjct 1 MATGTPAAELRELTEEELVSRLRESKEELFNLRFQMATGQLDNNRRLRVVRHEIARIYTV 60 Query 61 LRERELGLATGPDGK 75 +RERELGLATGP GK Sbjct 61 MRERELGLATGPAGK 75 >gi|25027086|ref|NP_737140.1| 50S ribosomal protein L29 [Corynebacterium efficiens YS-314] gi|259506785|ref|ZP_05749685.1| conserved domain protein [Corynebacterium efficiens YS-314] gi|73917092|sp|Q8FS74.1|RL29_COREF RecName: Full=50S ribosomal protein L29 gi|23492366|dbj|BAC17340.1| putative 50S ribosomal protein L29 [Corynebacterium efficiens YS-314] gi|259165656|gb|EEW50210.1| conserved domain protein [Corynebacterium efficiens YS-314] Length=76 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 51/72 (71%), Positives = 60/72 (84%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA+G E REL +EEL RL E+KEELFNLRFQ+ATGQL NNRRLRTV+++IARIYTV Sbjct 1 MAIGTPAHEFRELNEEELVNRLNEAKEELFNLRFQLATGQLTNNRRLRTVKRDIARIYTV 60 Query 61 LRERELGLATGP 72 +RERELGL+ P Sbjct 61 IRERELGLSVVP 72 >gi|19551754|ref|NP_599756.1| 50S ribosomal protein L29 [Corynebacterium glutamicum ATCC 13032] gi|62389409|ref|YP_224811.1| 50S ribosomal protein L29 [Corynebacterium glutamicum ATCC 13032] gi|145294667|ref|YP_001137488.1| 50S ribosomal protein L29 [Corynebacterium glutamicum R] 6 more sequence titles Length=76 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 51/72 (71%), Positives = 60/72 (84%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA+G E REL +EEL RL E+KEELFNLRFQ+ATGQL NNRRLRTV+++IARIYTV Sbjct 1 MAIGTPAHEFRELNEEELVTRLNEAKEELFNLRFQLATGQLTNNRRLRTVKRDIARIYTV 60 Query 61 LRERELGLATGP 72 +RERELGL+ P Sbjct 61 IRERELGLSVVP 72 >gi|111023104|ref|YP_706076.1| 50S ribosomal protein L29 [Rhodococcus jostii RHA1] gi|226365603|ref|YP_002783386.1| 50S ribosomal protein L29 [Rhodococcus opacus B4] gi|122955191|sp|Q0S3G8.1|RL29_RHOSR RecName: Full=50S ribosomal protein L29 gi|254801425|sp|C1B020.1|RL29_RHOOB RecName: Full=50S ribosomal protein L29 gi|110822634|gb|ABG97918.1| 50S ribosomal protein L29 [Rhodococcus jostii RHA1] gi|226244093|dbj|BAH54441.1| 50S ribosomal protein L29 [Rhodococcus opacus B4] Length=78 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/77 (80%), Positives = 66/77 (86%), Gaps = 0/77 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G ELRELT+EEL RLRESKEELFNLRFQMATGQ++NNRRLRTVR EIARIYTV Sbjct 1 MATGTPAAELRELTEEELVTRLRESKEELFNLRFQMATGQMDNNRRLRTVRHEIARIYTV 60 Query 61 LRERELGLATGPDGKES 77 LRERELGLA GPD ++ Sbjct 61 LRERELGLAVGPDAGDA 77 >gi|213964855|ref|ZP_03393054.1| ribosomal protein L29 [Corynebacterium amycolatum SK46] gi|213952391|gb|EEB63774.1| ribosomal protein L29 [Corynebacterium amycolatum SK46] Length=78 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 51/75 (68%), Positives = 62/75 (83%), Gaps = 1/75 (1%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 M+ G+ ELR L +++L +L+ESKEELFNLRFQ ATGQL NNRRLRTVR++IARIYTV Sbjct 1 MSNGIPAHELRSLDNDDLVAKLKESKEELFNLRFQSATGQLTNNRRLRTVRKDIARIYTV 60 Query 61 LRERELGLATGP-DG 74 +RERELGL+ P DG Sbjct 61 MRERELGLSAAPTDG 75 >gi|227549834|ref|ZP_03979883.1| 50S ribosomal protein L29 [Corynebacterium lipophiloflavum DSM 44291] gi|227078089|gb|EEI16052.1| 50S ribosomal protein L29 [Corynebacterium lipophiloflavum DSM 44291] Length=76 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 51/72 (71%), Positives = 59/72 (82%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G E RELTD+EL RL E+KEELFNLRFQ+ATGQL NNRR+ TV+++IARIYTV Sbjct 1 MAAGTPASEFRELTDDELRTRLAEAKEELFNLRFQLATGQLTNNRRISTVKRDIARIYTV 60 Query 61 LRERELGLATGP 72 LRERELGL+ P Sbjct 61 LRERELGLSVVP 72 >gi|312200012|ref|YP_004020073.1| ribosomal protein L29 [Frankia sp. EuI1c] gi|311231348|gb|ADP84203.1| ribosomal protein L29 [Frankia sp. EuI1c] Length=81 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 48/72 (67%), Positives = 58/72 (81%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA+ S +LR L+ +L ++LRE+KEELFNLRFQ ATGQL+NNRRLR V+ EIARIYTV Sbjct 1 MAIATSADDLRALSGADLVDKLREAKEELFNLRFQNATGQLSNNRRLRAVKHEIARIYTV 60 Query 61 LRERELGLATGP 72 +RERELGL P Sbjct 61 MRERELGLTVDP 72 >gi|227487115|ref|ZP_03917431.1| ribosomal protein L29 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541718|ref|ZP_03971767.1| ribosomal protein L29 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092773|gb|EEI28085.1| ribosomal protein L29 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182533|gb|EEI63505.1| ribosomal protein L29 [Corynebacterium glucuronolyticum ATCC 51866] Length=76 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 49/74 (67%), Positives = 59/74 (80%), Gaps = 0/74 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G+ ELR L + +L ERL+ESKEELFNLRFQ ATGQL NNRRL V+++IARIYTV Sbjct 1 MAAGIPASELRTLDNSQLVERLKESKEELFNLRFQHATGQLTNNRRLGVVKKDIARIYTV 60 Query 61 LRERELGLATGPDG 74 +RERELGL+ P+ Sbjct 61 IRERELGLSNVPEA 74 >gi|225020394|ref|ZP_03709586.1| hypothetical protein CORMATOL_00401 [Corynebacterium matruchotii ATCC 33806] gi|305679875|ref|ZP_07402685.1| ribosomal protein L29 [Corynebacterium matruchotii ATCC 14266] gi|224946783|gb|EEG27992.1| hypothetical protein CORMATOL_00401 [Corynebacterium matruchotii ATCC 33806] gi|305660495|gb|EFM49992.1| ribosomal protein L29 [Corynebacterium matruchotii ATCC 14266] Length=76 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 51/72 (71%), Positives = 58/72 (81%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G ELREL+ +EL RL E+KEELFNLRFQ ATGQL NNRRLRTV+ +IARIYTV Sbjct 1 MANGTPAHELRELSAKELENRLAEAKEELFNLRFQAATGQLTNNRRLRTVKHDIARIYTV 60 Query 61 LRERELGLATGP 72 +RERELGL+ P Sbjct 61 IRERELGLSVVP 72 >gi|237786387|ref|YP_002907092.1| 50S ribosomal protein L29 [Corynebacterium kroppenstedtii DSM 44385] gi|259646756|sp|C4LL44.1|RL29_CORK4 RecName: Full=50S ribosomal protein L29 gi|237759299|gb|ACR18549.1| 50S ribosomal protein L29 [Corynebacterium kroppenstedtii DSM 44385] Length=76 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 50/72 (70%), Positives = 59/72 (82%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G ELREL+ EEL RL E+KEELFNLRFQ ATGQL NNRRL TV+++IARI+TV Sbjct 1 MATGTPAHELRELSAEELTTRLHEAKEELFNLRFQNATGQLTNNRRLGTVKRDIARIHTV 60 Query 61 LRERELGLATGP 72 +RERELGL++ P Sbjct 61 IRERELGLSSAP 72 >gi|300779837|ref|ZP_07089693.1| 50S ribosomal protein L29 [Corynebacterium genitalium ATCC 33030] gi|300533947|gb|EFK55006.1| 50S ribosomal protein L29 [Corynebacterium genitalium ATCC 33030] Length=76 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/72 (70%), Positives = 58/72 (81%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G E RELT+ EL +RL +KEELFNLRFQ ATGQL NNRR+ TV+++IARIYTV Sbjct 1 MATGTPAHEFRELTEAELKDRLSAAKEELFNLRFQNATGQLTNNRRISTVKRDIARIYTV 60 Query 61 LRERELGLATGP 72 LRERELGL+T P Sbjct 61 LRERELGLSTVP 72 >gi|38233093|ref|NP_938860.1| 50S ribosomal protein L29 [Corynebacterium diphtheriae NCTC 13129] gi|300857770|ref|YP_003782753.1| 50S ribosomal protein L29 [Corynebacterium pseudotuberculosis FRC41] gi|337290023|ref|YP_004629044.1| 50S ribosomal protein L29 [Corynebacterium ulcerans BR-AD22] 9 more sequence titles Length=76 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/72 (73%), Positives = 58/72 (81%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G ELREL EEL RL E+KEELFNLRFQ ATGQL NNRRLRTV+++IARIYTV Sbjct 1 MANGTPAHELRELNAEELKTRLTEAKEELFNLRFQAATGQLTNNRRLRTVKRDIARIYTV 60 Query 61 LRERELGLATGP 72 +RERELGL+ P Sbjct 61 IRERELGLSEVP 72 >gi|255324744|ref|ZP_05365858.1| ribosomal protein L29 [Corynebacterium tuberculostearicum SK141] gi|311740069|ref|ZP_07713903.1| 50S ribosomal protein L29 [Corynebacterium pseudogenitalium ATCC 33035] gi|255298219|gb|EET77522.1| ribosomal protein L29 [Corynebacterium tuberculostearicum SK141] gi|311305142|gb|EFQ81211.1| 50S ribosomal protein L29 [Corynebacterium pseudogenitalium ATCC 33035] Length=76 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 48/72 (67%), Positives = 57/72 (80%), Gaps = 0/72 (0%) Query 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 MA G E REL + EL RL+++KEELFNLRFQ ATGQL NNRR+ TV+++IARIYTV Sbjct 1 MATGTPAHEFRELDNAELQSRLKDAKEELFNLRFQKATGQLTNNRRIGTVKRDIARIYTV 60 Query 61 LRERELGLATGP 72 LRERELGL+ P Sbjct 61 LRERELGLSVAP 72 Lambda K H 0.315 0.133 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130175841596 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40