BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0710 Length=136 Score E Sequences producing significant alignments: (Bits) Value gi|15607850|ref|NP_215224.1| 30S ribosomal protein S17 [Mycobact... 266 6e-70 gi|15840117|ref|NP_335154.1| 30S ribosomal protein S17 [Mycobact... 266 7e-70 gi|2113875|emb|CAA73681.1| rpsQ [Mycobacterium bovis BCG] 266 8e-70 gi|340625731|ref|YP_004744183.1| putative 30S ribosomal protein ... 263 6e-69 gi|253797653|ref|YP_003030654.1| 30S ribosomal protein S17 rpsQ ... 242 2e-62 gi|294996205|ref|ZP_06801896.1| 30S ribosomal protein S17 [Mycob... 208 2e-52 gi|240167712|ref|ZP_04746371.1| 30S ribosomal protein S17 [Mycob... 182 1e-44 gi|183981062|ref|YP_001849353.1| 30S ribosomal protein S17, RpsQ... 182 1e-44 gi|15827993|ref|NP_302256.1| 30S ribosomal protein S17 [Mycobact... 179 8e-44 gi|221230470|ref|YP_002503886.1| 30S ribosomal protein S17 [Myco... 179 8e-44 gi|3122809|sp|O32990.1|RS17_MYCLE RecName: Full=30S ribosomal pr... 179 9e-44 gi|333991969|ref|YP_004524583.1| 30S ribosomal protein S17 RpsQ ... 179 1e-43 gi|118616580|ref|YP_904912.1| 30S ribosomal protein S17 [Mycobac... 177 4e-43 gi|118464323|ref|YP_883597.1| 30S ribosomal protein S17 [Mycobac... 176 1e-42 gi|342861800|ref|ZP_08718445.1| 30S ribosomal protein S17 [Mycob... 176 1e-42 gi|41410268|ref|NP_963104.1| 30S ribosomal protein S17 [Mycobact... 176 1e-42 gi|296168566|ref|ZP_06850370.1| 30S ribosomal protein S17 [Mycob... 173 9e-42 gi|254820466|ref|ZP_05225467.1| 30S ribosomal protein S17 [Mycob... 172 1e-41 gi|118470178|ref|YP_885828.1| 30S ribosomal protein S17 [Mycobac... 170 6e-41 gi|120402325|ref|YP_952154.1| 30S ribosomal protein S17 [Mycobac... 165 2e-39 gi|145225616|ref|YP_001136294.1| ribosomal protein S17 [Mycobact... 164 5e-39 gi|126433657|ref|YP_001069348.1| 30S ribosomal protein S17P [Myc... 163 9e-39 gi|169630891|ref|YP_001704540.1| 30S ribosomal protein S17 [Myco... 162 2e-38 gi|108797995|ref|YP_638192.1| 30S ribosomal protein S17P [Mycoba... 162 2e-38 gi|333918156|ref|YP_004491737.1| 30S ribosomal protein S17 [Amyc... 159 1e-37 gi|54022709|ref|YP_116951.1| 30S ribosomal protein S17 [Nocardia... 152 2e-35 gi|296141106|ref|YP_003648349.1| 30S ribosomal protein S17 [Tsuk... 145 2e-33 gi|312140909|ref|YP_004008245.1| 30S ribosomal protein s17 rpsq ... 145 2e-33 gi|111023105|ref|YP_706077.1| 30S ribosomal protein S17 [Rhodoco... 145 2e-33 gi|326385090|ref|ZP_08206760.1| 30S ribosomal protein S17 [Gordo... 142 1e-32 gi|226305350|ref|YP_002765308.1| 30S ribosomal protein S17 [Rhod... 140 5e-32 gi|343927774|ref|ZP_08767242.1| 30S ribosomal protein S17 [Gordo... 140 7e-32 gi|336319944|ref|YP_004599912.1| 30S ribosomal protein S17 [Cell... 140 8e-32 gi|262203615|ref|YP_003274823.1| 30S ribosomal protein S17 [Gord... 139 2e-31 gi|334336195|ref|YP_004541347.1| 30S ribosomal protein S17 [Isop... 136 9e-31 gi|332669526|ref|YP_004452534.1| 30S ribosomal protein S17 [Cell... 136 1e-30 gi|220913423|ref|YP_002488732.1| 30S ribosomal protein S17 [Arth... 136 1e-30 gi|296130486|ref|YP_003637736.1| 30S ribosomal protein S17 [Cell... 136 1e-30 gi|84494777|ref|ZP_00993896.1| 30S ribosomal protein S17 [Janiba... 135 1e-30 gi|284033993|ref|YP_003383924.1| 30S ribosomal protein S17 [Krib... 135 1e-30 gi|229821614|ref|YP_002883140.1| 30S ribosomal protein S17 [Beut... 135 3e-30 gi|319948714|ref|ZP_08022835.1| 30S ribosomal protein S17 [Dietz... 135 3e-30 gi|331699167|ref|YP_004335406.1| 30S ribosomal protein S17 [Pseu... 134 4e-30 gi|256831836|ref|YP_003160563.1| 30S ribosomal protein S17 [Jone... 134 4e-30 gi|257054479|ref|YP_003132311.1| 30S ribosomal protein S17P [Sac... 134 4e-30 gi|302543352|ref|ZP_07295694.1| 30S ribosomal protein S17 [Strep... 134 5e-30 gi|302553551|ref|ZP_07305893.1| 30S ribosomal protein S17 [Strep... 134 5e-30 gi|163840897|ref|YP_001625302.1| SSU ribosomal protein S17P [Ren... 134 5e-30 gi|119961764|ref|YP_948648.1| ribosomal protein S17 [Arthrobacte... 134 5e-30 gi|269955444|ref|YP_003325233.1| 30S ribosomal protein S17 [Xyla... 133 8e-30 >gi|15607850|ref|NP_215224.1| 30S ribosomal protein S17 [Mycobacterium tuberculosis H37Rv] gi|31791895|ref|NP_854388.1| 30S ribosomal protein S17 [Mycobacterium bovis AF2122/97] gi|121636632|ref|YP_976855.1| 30S ribosomal protein S17 [Mycobacterium bovis BCG str. Pasteur 1173P2] 28 more sequence titles Length=136 Score = 266 bits (681), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 135/136 (99%), Positives = 136/136 (100%), Gaps = 0/136 (0%) Query 1 VMAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKT 60 +MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKT Sbjct 1 MMAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKT 60 Query 61 RIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPL 120 RIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPL Sbjct 61 RIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPL 120 Query 121 SATKRWRLVEILEKAK 136 SATKRWRLVEILEKAK Sbjct 121 SATKRWRLVEILEKAK 136 >gi|15840117|ref|NP_335154.1| 30S ribosomal protein S17 [Mycobacterium tuberculosis CDC1551] gi|148821915|ref|YP_001286669.1| 30S ribosomal protein S17 [Mycobacterium tuberculosis F11] gi|167967953|ref|ZP_02550230.1| 30S ribosomal protein S17 [Mycobacterium tuberculosis H37Ra] 15 more sequence titles Length=135 Score = 266 bits (680), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 135/135 (100%), Positives = 135/135 (100%), Gaps = 0/135 (0%) Query 2 MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTR 61 MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTR Sbjct 1 MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTR 60 Query 62 IGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLS 121 IGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLS Sbjct 61 IGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLS 120 Query 122 ATKRWRLVEILEKAK 136 ATKRWRLVEILEKAK Sbjct 121 ATKRWRLVEILEKAK 135 >gi|2113875|emb|CAA73681.1| rpsQ [Mycobacterium bovis BCG] Length=136 Score = 266 bits (680), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 135/135 (100%), Positives = 135/135 (100%), Gaps = 0/135 (0%) Query 2 MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTR 61 MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTR Sbjct 1 MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTR 60 Query 62 IGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLS 121 IGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLS Sbjct 61 IGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLS 120 Query 122 ATKRWRLVEILEKAK 136 ATKRWRLVEILEKAK Sbjct 121 ATKRWRLVEILEKAK 135 >gi|340625731|ref|YP_004744183.1| putative 30S ribosomal protein S17 RPSQ [Mycobacterium canettii CIPT 140010059] gi|340003921|emb|CCC43055.1| putative 30S ribosomal protein S17 RPSQ [Mycobacterium canettii CIPT 140010059] Length=136 Score = 263 bits (672), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 134/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%) Query 1 VMAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKT 60 +MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKG KHTPRTPKPRGRRKT Sbjct 1 MMAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGLKHTPRTPKPRGRRKT 60 Query 61 RIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPL 120 RIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPL Sbjct 61 RIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPL 120 Query 121 SATKRWRLVEILEKAK 136 SATKRWRLVEILEKAK Sbjct 121 SATKRWRLVEILEKAK 136 >gi|253797653|ref|YP_003030654.1| 30S ribosomal protein S17 rpsQ [Mycobacterium tuberculosis KZN 1435] gi|254363656|ref|ZP_04979702.1| 30S ribosomal protein S17 rpsQ [Mycobacterium tuberculosis str. Haarlem] gi|298524201|ref|ZP_07011610.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] 30 more sequence titles Length=122 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/122 (99%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 15 VAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTI 74 +AKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTI Sbjct 1 MAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTI 60 Query 75 VVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEK 134 VVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEK Sbjct 61 VVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEK 120 Query 135 AK 136 AK Sbjct 121 AK 122 >gi|294996205|ref|ZP_06801896.1| 30S ribosomal protein S17 [Mycobacterium tuberculosis 210] Length=106 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%) Query 2 MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTR 61 MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTR Sbjct 1 MAEAKTGAKAAPRVAKAAKAAPKKAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTR 60 Query 62 IGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAG 107 IGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAG Sbjct 61 IGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAG 106 >gi|240167712|ref|ZP_04746371.1| 30S ribosomal protein S17 [Mycobacterium kansasii ATCC 12478] Length=129 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 92/112 (83%), Positives = 98/112 (88%), Gaps = 7/112 (6%) Query 25 KAAPNDAEAIGAANAANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRH 84 +AAP D + KGPK+TP PKPRGRRKTRIGYVVSDKMQKTIVVELEDR+RH Sbjct 25 EAAPKDV-------PSKAKGPKNTPSVPKPRGRRKTRIGYVVSDKMQKTIVVELEDRVRH 77 Query 85 PLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 PLYGKIIRTTKKVKAHDE+S+AGIGDRVSLMETRPLSATKRWRLVEILEKAK Sbjct 78 PLYGKIIRTTKKVKAHDENSIAGIGDRVSLMETRPLSATKRWRLVEILEKAK 129 >gi|183981062|ref|YP_001849353.1| 30S ribosomal protein S17, RpsQ [Mycobacterium marinum M] gi|226697994|sp|B2HSP0.1|RS17_MYCMM RecName: Full=30S ribosomal protein S17 gi|183174388|gb|ACC39498.1| 30S ribosomal protein S17, RpsQ [Mycobacterium marinum M] Length=119 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 89/94 (95%), Positives = 90/94 (96%), Gaps = 0/94 (0%) Query 43 KGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 102 KGPKHTP TPKPRGRRKTRIGYVVSDKMQKTIVVELEDR+RHPLYGKIIRTTKKVK HDE Sbjct 26 KGPKHTPSTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRVRHPLYGKIIRTTKKVKVHDE 85 Query 103 DSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 S AGIGDRVSLMETRPLSATKRWRLVEILEKAK Sbjct 86 HSAAGIGDRVSLMETRPLSATKRWRLVEILEKAK 119 >gi|15827993|ref|NP_302256.1| 30S ribosomal protein S17 [Mycobacterium leprae TN] gi|13093546|emb|CAC30808.1| 30S ribosomal protein S17 [Mycobacterium leprae] Length=127 Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 88/94 (94%), Positives = 89/94 (95%), Gaps = 0/94 (0%) Query 43 KGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 102 KGPKHTP PK RG RK RIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE Sbjct 34 KGPKHTPSIPKVRGGRKMRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 93 Query 103 DSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 +SVAGIGDRVSLMETRPLSATKRWRLVEILEKAK Sbjct 94 NSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 127 >gi|221230470|ref|YP_002503886.1| 30S ribosomal protein S17 [Mycobacterium leprae Br4923] gi|219933577|emb|CAR71950.1| 30S ribosomal protein S17 [Mycobacterium leprae Br4923] Length=127 Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 88/94 (94%), Positives = 89/94 (95%), Gaps = 0/94 (0%) Query 43 KGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 102 KGPKHTP PK RG RK RIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE Sbjct 34 KGPKHTPSIPKVRGGRKMRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 93 Query 103 DSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 +SVAGIGDRVSLMETRPLSATKRWRLVEILEKAK Sbjct 94 NSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 127 >gi|3122809|sp|O32990.1|RS17_MYCLE RecName: Full=30S ribosomal protein S17 gi|2344841|emb|CAB11443.1| ribosomal protein S17 [Mycobacterium leprae] Length=126 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 88/94 (94%), Positives = 89/94 (95%), Gaps = 0/94 (0%) Query 43 KGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 102 KGPKHTP PK RG RK RIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE Sbjct 33 KGPKHTPSIPKVRGGRKMRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 92 Query 103 DSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 +SVAGIGDRVSLMETRPLSATKRWRLVEILEKAK Sbjct 93 NSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 126 >gi|333991969|ref|YP_004524583.1| 30S ribosomal protein S17 RpsQ [Mycobacterium sp. JDM601] gi|333487937|gb|AEF37329.1| 30S ribosomal protein S17 RpsQ [Mycobacterium sp. JDM601] Length=105 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 88/100 (88%), Positives = 94/100 (94%), Gaps = 1/100 (1%) Query 37 ANAANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKK 96 ANA KGPKHTPR KPRGRRKT+IGYVVSDKM+KTIVVELEDR++HPLYGKIIRTTKK Sbjct 7 ANATE-KGPKHTPRAEKPRGRRKTQIGYVVSDKMEKTIVVELEDRVKHPLYGKIIRTTKK 65 Query 97 VKAHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 VKAHDE++ AGIGDRVSLMETRPLSATKRWRLVEILEKAK Sbjct 66 VKAHDENNTAGIGDRVSLMETRPLSATKRWRLVEILEKAK 105 >gi|118616580|ref|YP_904912.1| 30S ribosomal protein S17 [Mycobacterium ulcerans Agy99] gi|259494789|sp|A0PM72.1|RS17_MYCUA RecName: Full=30S ribosomal protein S17 gi|118568690|gb|ABL03441.1| 30S ribosomal protein S17, RpsQ [Mycobacterium ulcerans Agy99] Length=120 Score = 177 bits (450), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 87/94 (93%), Positives = 88/94 (94%), Gaps = 0/94 (0%) Query 43 KGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 102 KGPKHTP PKP GRRKTRIGYVVSDKMQKTIVVELEDR+RHPLYGKIIRTTKKVK HDE Sbjct 27 KGPKHTPSPPKPSGRRKTRIGYVVSDKMQKTIVVELEDRVRHPLYGKIIRTTKKVKVHDE 86 Query 103 DSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 S AGIGDRVSLMETRPLSATKRWRLVEILEKAK Sbjct 87 HSAAGIGDRVSLMETRPLSATKRWRLVEILEKAK 120 >gi|118464323|ref|YP_883597.1| 30S ribosomal protein S17 [Mycobacterium avium 104] gi|254776898|ref|ZP_05218414.1| 30S ribosomal protein S17 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165610|gb|ABK66507.1| 30S ribosomal protein S17 [Mycobacterium avium 104] gi|336460659|gb|EGO39550.1| 30S ribosomal protein S17 [Mycobacterium avium subsp. paratuberculosis S397] Length=116 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 86/94 (92%), Positives = 90/94 (96%), Gaps = 0/94 (0%) Query 43 KGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 102 KGPKHTP PK RGRRKTRIGYVVSDKMQKTIVVELEDR++HPLYGKIIRTTKKVKAHDE Sbjct 23 KGPKHTPPNPKVRGRRKTRIGYVVSDKMQKTIVVELEDRVKHPLYGKIIRTTKKVKAHDE 82 Query 103 DSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 +S+AGIGDRVSLMETRP SATKRWRLVEILEKAK Sbjct 83 NSIAGIGDRVSLMETRPTSATKRWRLVEILEKAK 116 >gi|342861800|ref|ZP_08718445.1| 30S ribosomal protein S17 [Mycobacterium colombiense CECT 3035] gi|342130617|gb|EGT83921.1| 30S ribosomal protein S17 [Mycobacterium colombiense CECT 3035] Length=118 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 86/97 (89%), Positives = 88/97 (91%), Gaps = 0/97 (0%) Query 40 ANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKA 99 N KGPKHTP PK RGRRK RIGYVVSDKMQKTIVVELEDR+RHPLYGKIIRTT KVKA Sbjct 22 GNAKGPKHTPANPKVRGRRKVRIGYVVSDKMQKTIVVELEDRVRHPLYGKIIRTTTKVKA 81 Query 100 HDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 HDE+S AGIGDRVSLMETRP SATKRWRLVEILEKAK Sbjct 82 HDENSTAGIGDRVSLMETRPTSATKRWRLVEILEKAK 118 >gi|41410268|ref|NP_963104.1| 30S ribosomal protein S17 [Mycobacterium avium subsp. paratuberculosis K-10] gi|81412962|sp|Q73SA5.1|RS17_MYCPA RecName: Full=30S ribosomal protein S17 gi|41399102|gb|AAS06720.1| RpsQ [Mycobacterium avium subsp. paratuberculosis K-10] Length=117 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 86/94 (92%), Positives = 90/94 (96%), Gaps = 0/94 (0%) Query 43 KGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 102 KGPKHTP PK RGRRKTRIGYVVSDKMQKTIVVELEDR++HPLYGKIIRTTKKVKAHDE Sbjct 24 KGPKHTPPNPKVRGRRKTRIGYVVSDKMQKTIVVELEDRVKHPLYGKIIRTTKKVKAHDE 83 Query 103 DSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 +S+AGIGDRVSLMETRP SATKRWRLVEILEKAK Sbjct 84 NSIAGIGDRVSLMETRPTSATKRWRLVEILEKAK 117 >gi|296168566|ref|ZP_06850370.1| 30S ribosomal protein S17 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896629|gb|EFG76268.1| 30S ribosomal protein S17 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=114 Score = 173 bits (438), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 85/94 (91%), Positives = 87/94 (93%), Gaps = 0/94 (0%) Query 43 KGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDE 102 KGPKHTP PK RGRRK RIGYVVSDKMQKTIVVELEDR+RHPLYGKIIRTT KVKAHDE Sbjct 21 KGPKHTPANPKVRGRRKMRIGYVVSDKMQKTIVVELEDRVRHPLYGKIIRTTTKVKAHDE 80 Query 103 DSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 +S AGIGDRVSLMETRP SATKRWRLVEILEKAK Sbjct 81 NSTAGIGDRVSLMETRPTSATKRWRLVEILEKAK 114 >gi|254820466|ref|ZP_05225467.1| 30S ribosomal protein S17 [Mycobacterium intracellulare ATCC 13950] Length=115 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 85/93 (92%), Positives = 87/93 (94%), Gaps = 0/93 (0%) Query 44 GPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDED 103 GPKHTP PK RGRRK RIGYVVSDKMQKTIVVELEDR+RHPLYGKIIRTTKKVKAHDE+ Sbjct 23 GPKHTPANPKVRGRRKMRIGYVVSDKMQKTIVVELEDRVRHPLYGKIIRTTKKVKAHDEN 82 Query 104 SVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 S AGIGDRVSLMETRP SATKRWRLVEILEKAK Sbjct 83 SAAGIGDRVSLMETRPTSATKRWRLVEILEKAK 115 >gi|118470178|ref|YP_885828.1| 30S ribosomal protein S17 [Mycobacterium smegmatis str. MC2 155] gi|302595882|sp|A0QSE0.1|RS17_MYCS2 RecName: Full=30S ribosomal protein S17 gi|118171465|gb|ABK72361.1| 30S ribosomal protein S17 [Mycobacterium smegmatis str. MC2 155] Length=98 Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 85/97 (88%), Positives = 88/97 (91%), Gaps = 0/97 (0%) Query 40 ANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKA 99 A+ KGPK+TP KPRGRRKT IGYVVSDKMQKTIVVELEDR HPLYGKIIRTTKKVKA Sbjct 2 ADQKGPKYTPAAEKPRGRRKTAIGYVVSDKMQKTIVVELEDRKSHPLYGKIIRTTKKVKA 61 Query 100 HDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 HDE+ AGIGDRVSLMETRPLSATKRWRLVEILEKAK Sbjct 62 HDENGEAGIGDRVSLMETRPLSATKRWRLVEILEKAK 98 >gi|120402325|ref|YP_952154.1| 30S ribosomal protein S17 [Mycobacterium vanbaalenii PYR-1] gi|119955143|gb|ABM12148.1| SSU ribosomal protein S17P [Mycobacterium vanbaalenii PYR-1] Length=98 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 81/97 (84%), Positives = 86/97 (89%), Gaps = 0/97 (0%) Query 40 ANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKA 99 A+ KG K+TPRT KPRGRRKT IGYVVSDKMQKTIVVELE R HPLYGKIIRTT KVKA Sbjct 2 ADTKGAKYTPRTEKPRGRRKTAIGYVVSDKMQKTIVVELESRKSHPLYGKIIRTTTKVKA 61 Query 100 HDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 HDE+ AG+GDRVSLMETRP SATKRWRLVE+LEKAK Sbjct 62 HDENEDAGVGDRVSLMETRPTSATKRWRLVEVLEKAK 98 >gi|145225616|ref|YP_001136294.1| ribosomal protein S17 [Mycobacterium gilvum PYR-GCK] gi|315445969|ref|YP_004078848.1| 30S ribosomal protein S17P [Mycobacterium sp. Spyr1] gi|145218102|gb|ABP47506.1| SSU ribosomal protein S17P [Mycobacterium gilvum PYR-GCK] gi|315264272|gb|ADU01014.1| SSU ribosomal protein S17P [Mycobacterium sp. Spyr1] Length=98 Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 81/97 (84%), Positives = 84/97 (87%), Gaps = 0/97 (0%) Query 40 ANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKA 99 A+ KG KHTPRT RGRRKT IGYVVSDKMQKTIVVELE R HPLYGKIIRTT KVKA Sbjct 2 ADTKGEKHTPRTEDKRGRRKTAIGYVVSDKMQKTIVVELESRKSHPLYGKIIRTTTKVKA 61 Query 100 HDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 HDE+ AGIGDRVSLMETRP SATKRWRLVE+LEKAK Sbjct 62 HDENESAGIGDRVSLMETRPTSATKRWRLVEVLEKAK 98 >gi|126433657|ref|YP_001069348.1| 30S ribosomal protein S17P [Mycobacterium sp. JLS] gi|126233457|gb|ABN96857.1| SSU ribosomal protein S17P [Mycobacterium sp. JLS] Length=99 Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 80/98 (82%), Positives = 85/98 (87%), Gaps = 0/98 (0%) Query 39 AANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVK 98 A KGP +TPRT KPR RRKT IGYVVSDKM+KTIVVELE R HPLYGKIIRTT KVK Sbjct 2 AETAKGPAYTPRTEKPRNRRKTAIGYVVSDKMEKTIVVELESRKSHPLYGKIIRTTSKVK 61 Query 99 AHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 AHDE+ AG+GDRVSLMETRPLSATKRWRLVE+LEKAK Sbjct 62 AHDENGDAGVGDRVSLMETRPLSATKRWRLVEVLEKAK 99 >gi|169630891|ref|YP_001704540.1| 30S ribosomal protein S17 [Mycobacterium abscessus ATCC 19977] gi|169242858|emb|CAM63886.1| 30S ribosomal protein S17 [Mycobacterium abscessus] Length=105 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 78/93 (84%), Positives = 83/93 (90%), Gaps = 0/93 (0%) Query 44 GPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDED 103 GP+HTP T +PRGRRKT IGYVVSDKMQKTIVVELE R RH LYGKIIRTT KVKAHDE+ Sbjct 13 GPRHTPATEQPRGRRKTAIGYVVSDKMQKTIVVELESRNRHSLYGKIIRTTSKVKAHDEN 72 Query 104 SVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 AG+GDRVSLMETRP SATKRWRLVE+LEKAK Sbjct 73 GDAGVGDRVSLMETRPTSATKRWRLVEVLEKAK 105 >gi|108797995|ref|YP_638192.1| 30S ribosomal protein S17P [Mycobacterium sp. MCS] gi|119867091|ref|YP_937043.1| 30S ribosomal protein S17P [Mycobacterium sp. KMS] gi|108768414|gb|ABG07136.1| SSU ribosomal protein S17P [Mycobacterium sp. MCS] gi|119693180|gb|ABL90253.1| SSU ribosomal protein S17P [Mycobacterium sp. KMS] Length=99 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 79/98 (81%), Positives = 85/98 (87%), Gaps = 0/98 (0%) Query 39 AANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVK 98 A KGP +TPR+ KPR RRKT IGYVVSDKM+KTIVVELE R HPLYGKIIRTT KVK Sbjct 2 AETAKGPAYTPRSEKPRNRRKTAIGYVVSDKMEKTIVVELESRKSHPLYGKIIRTTSKVK 61 Query 99 AHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 AHDE+ AG+GDRVSLMETRPLSATKRWRLVE+LEKAK Sbjct 62 AHDENGDAGVGDRVSLMETRPLSATKRWRLVEVLEKAK 99 >gi|333918156|ref|YP_004491737.1| 30S ribosomal protein S17 [Amycolicicoccus subflavus DQS3-9A1] gi|333480377|gb|AEF38937.1| 30S ribosomal protein S17 [Amycolicicoccus subflavus DQS3-9A1] Length=103 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 75/99 (76%), Positives = 85/99 (86%), Gaps = 0/99 (0%) Query 38 NAANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKV 97 N+ N + + +T KPRGRRKTRIGYVVSDKMQKTIVVELEDR++H LYGK+IR T +V Sbjct 5 NSVNSAQAEGSAQTQKPRGRRKTRIGYVVSDKMQKTIVVELEDRVKHSLYGKVIRRTSRV 64 Query 98 KAHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 KAHDE+ AGIGDRV LMETRPLSATKRWRLVE+LEKAK Sbjct 65 KAHDENETAGIGDRVQLMETRPLSATKRWRLVEVLEKAK 103 >gi|54022709|ref|YP_116951.1| 30S ribosomal protein S17 [Nocardia farcinica IFM 10152] gi|81823257|sp|Q5Z1V4.1|RS17_NOCFA RecName: Full=30S ribosomal protein S17 gi|54014217|dbj|BAD55587.1| putative ribosomal protein S17 [Nocardia farcinica IFM 10152] Length=89 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/82 (87%), Positives = 77/82 (94%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 RGRRK RIGYVVSDKM KTIVVELEDR++HPLYGKIIRTT KVKAHDE+ +AG+GDRV L Sbjct 8 RGRRKVRIGYVVSDKMNKTIVVELEDRVKHPLYGKIIRTTSKVKAHDENEIAGVGDRVQL 67 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSATKRWRLVE+LEKAK Sbjct 68 METRPLSATKRWRLVEVLEKAK 89 >gi|296141106|ref|YP_003648349.1| 30S ribosomal protein S17 [Tsukamurella paurometabola DSM 20162] gi|296029240|gb|ADG80010.1| 30S ribosomal protein S17 [Tsukamurella paurometabola DSM 20162] Length=94 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 71/101 (71%), Positives = 81/101 (81%), Gaps = 8/101 (7%) Query 36 AANAANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTK 95 + N +NV T + R RK RIGYVVSDKM+KTIVVELEDR++H LYGKIIRTT Sbjct 2 SENGSNV--------TTEQRNSRKVRIGYVVSDKMEKTIVVELEDRVKHALYGKIIRTTS 53 Query 96 KVKAHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 KVKAHDED VAG+GDRV +METRPLSA+K WRLVE+LEKAK Sbjct 54 KVKAHDEDGVAGVGDRVRIMETRPLSASKHWRLVEVLEKAK 94 >gi|312140909|ref|YP_004008245.1| 30S ribosomal protein s17 rpsq [Rhodococcus equi 103S] gi|325675453|ref|ZP_08155137.1| 30S ribosomal protein S17 [Rhodococcus equi ATCC 33707] gi|311890248|emb|CBH49566.1| 30S ribosomal protein S17 RpsQ [Rhodococcus equi 103S] gi|325553424|gb|EGD23102.1| 30S ribosomal protein S17 [Rhodococcus equi ATCC 33707] Length=96 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 69/89 (78%), Positives = 77/89 (87%), Gaps = 0/89 (0%) Query 48 TPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAG 107 + + + RG RK R GYVVSDKM+KTIVVELEDR++HPLYGKIIR T KVKAHDE+ AG Sbjct 8 STNSTEDRGSRKVRTGYVVSDKMEKTIVVELEDRVKHPLYGKIIRRTTKVKAHDENGTAG 67 Query 108 IGDRVSLMETRPLSATKRWRLVEILEKAK 136 IGDRV LMETRPLSATKRWRLVE+LEKAK Sbjct 68 IGDRVQLMETRPLSATKRWRLVEVLEKAK 96 >gi|111023105|ref|YP_706077.1| 30S ribosomal protein S17 [Rhodococcus jostii RHA1] gi|226365604|ref|YP_002783387.1| 30S ribosomal protein S17 [Rhodococcus opacus B4] gi|118573204|sp|Q0S3G7.1|RS17_RHOSR RecName: Full=30S ribosomal protein S17 gi|254811373|sp|C1B021.1|RS17_RHOOB RecName: Full=30S ribosomal protein S17 gi|110822635|gb|ABG97919.1| 30S ribosomal protein S17 [Rhodococcus jostii RHA1] gi|226244094|dbj|BAH54442.1| 30S ribosomal protein S17 [Rhodococcus opacus B4] Length=93 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 69/86 (81%), Positives = 76/86 (89%), Gaps = 0/86 (0%) Query 51 TPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGD 110 + + RG RK R GYVVSDKM+KTIVVELEDR++HPLYGKIIR T KVKAHDE+ VAGIGD Sbjct 8 STEERGSRKVRTGYVVSDKMEKTIVVELEDRVKHPLYGKIIRRTSKVKAHDENGVAGIGD 67 Query 111 RVSLMETRPLSATKRWRLVEILEKAK 136 RV LMETRPLSATK WRLVE+LEKAK Sbjct 68 RVQLMETRPLSATKHWRLVEVLEKAK 93 >gi|326385090|ref|ZP_08206760.1| 30S ribosomal protein S17 [Gordonia neofelifaecis NRRL B-59395] gi|326196175|gb|EGD53379.1| 30S ribosomal protein S17 [Gordonia neofelifaecis NRRL B-59395] Length=93 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/82 (83%), Positives = 73/82 (90%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 R RK RIGYVVSDKMQKTI VELEDR HPLYGKIIRTT KVKAHDE+ +AG+GDRV + Sbjct 12 RAGRKERIGYVVSDKMQKTITVELEDRKSHPLYGKIIRTTSKVKAHDEEQIAGVGDRVRI 71 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSATKRWRLVE+LEKAK Sbjct 72 METRPLSATKRWRLVEVLEKAK 93 >gi|226305350|ref|YP_002765308.1| 30S ribosomal protein S17 [Rhodococcus erythropolis PR4] gi|229489665|ref|ZP_04383528.1| 30S ribosomal protein S17 [Rhodococcus erythropolis SK121] gi|259494792|sp|C0ZW34.1|RS17_RHOE4 RecName: Full=30S ribosomal protein S17 gi|226184465|dbj|BAH32569.1| 30S ribosomal protein S17 [Rhodococcus erythropolis PR4] gi|229323762|gb|EEN89520.1| 30S ribosomal protein S17 [Rhodococcus erythropolis SK121] Length=93 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 66/86 (77%), Positives = 75/86 (88%), Gaps = 0/86 (0%) Query 51 TPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGD 110 + + R RK R+GYVVSDKM+KTIVVELEDR++H LYGKIIR T KVKAHDE+ VAG+GD Sbjct 8 STEERASRKVRVGYVVSDKMEKTIVVELEDRVKHKLYGKIIRRTTKVKAHDENGVAGVGD 67 Query 111 RVSLMETRPLSATKRWRLVEILEKAK 136 RV LMETRPLSATK WRLVE+LEKAK Sbjct 68 RVQLMETRPLSATKHWRLVEVLEKAK 93 >gi|343927774|ref|ZP_08767242.1| 30S ribosomal protein S17 [Gordonia alkanivorans NBRC 16433] gi|343762415|dbj|GAA14168.1| 30S ribosomal protein S17 [Gordonia alkanivorans NBRC 16433] Length=96 Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 68/82 (83%), Positives = 72/82 (88%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 R RRK RIGYVVSDKMQKTIVVELEDR HPLY KIIRTT KVKAHDE+ AG+GDRV + Sbjct 15 RNRRKERIGYVVSDKMQKTIVVELEDRKSHPLYKKIIRTTSKVKAHDENGDAGVGDRVRI 74 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSATK WRLVE+LEKAK Sbjct 75 METRPLSATKHWRLVEVLEKAK 96 >gi|336319944|ref|YP_004599912.1| 30S ribosomal protein S17 [Cellvibrio gilvus ATCC 13127] gi|336103525|gb|AEI11344.1| 30S ribosomal protein S17 [Cellvibrio gilvus ATCC 13127] Length=94 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 68/91 (75%), Positives = 77/91 (85%), Gaps = 0/91 (0%) Query 46 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 105 KHT T + R RKTR GYVVSDKM KT+VVE+EDR++HPLYGK++R T KVKAHDE + Sbjct 4 KHTTATAEHRAYRKTRRGYVVSDKMDKTVVVEVEDRVKHPLYGKVLRRTSKVKAHDEQNT 63 Query 106 AGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 AGIGD V +METRPLSATKRWRLVEILEKAK Sbjct 64 AGIGDLVLIMETRPLSATKRWRLVEILEKAK 94 >gi|262203615|ref|YP_003274823.1| 30S ribosomal protein S17 [Gordonia bronchialis DSM 43247] gi|262086962|gb|ACY22930.1| 30S ribosomal protein S17 [Gordonia bronchialis DSM 43247] Length=94 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/82 (82%), Positives = 72/82 (88%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 R RK RIGYVVSDKM+KTIVVELEDR RH LYGKIIRTT KVKAHDE+ AG+GDRV + Sbjct 13 RNSRKERIGYVVSDKMEKTIVVELEDRTRHALYGKIIRTTSKVKAHDENGDAGVGDRVRI 72 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSATK WRLVE+LEKAK Sbjct 73 METRPLSATKHWRLVEVLEKAK 94 >gi|334336195|ref|YP_004541347.1| 30S ribosomal protein S17 [Isoptericola variabilis 225] gi|334106563|gb|AEG43453.1| 30S ribosomal protein S17 [Isoptericola variabilis 225] Length=98 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 65/82 (80%), Positives = 73/82 (90%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 RG RK R GYVVSDKM+KTIVVE+EDR++HPLYGK++R T KVKAHDE + AGIGD V + Sbjct 17 RGTRKVRRGYVVSDKMEKTIVVEVEDRVKHPLYGKVMRRTNKVKAHDEQNTAGIGDLVVI 76 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSATKRWRLVEILEKAK Sbjct 77 METRPLSATKRWRLVEILEKAK 98 >gi|332669526|ref|YP_004452534.1| 30S ribosomal protein S17 [Cellulomonas fimi ATCC 484] gi|332338564|gb|AEE45147.1| 30S ribosomal protein S17 [Cellulomonas fimi ATCC 484] Length=94 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 68/91 (75%), Positives = 75/91 (83%), Gaps = 0/91 (0%) Query 46 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 105 K T T + R RKTR GYVVSDKM KT+VVE+EDR++HPLYGK+IR T KVKAHDE Sbjct 4 KSTTATAEHRAYRKTRRGYVVSDKMDKTVVVEVEDRVKHPLYGKVIRRTSKVKAHDEQGS 63 Query 106 AGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 AGIGD V +METRPLSATKRWRLVEILEKAK Sbjct 64 AGIGDLVLIMETRPLSATKRWRLVEILEKAK 94 >gi|220913423|ref|YP_002488732.1| 30S ribosomal protein S17 [Arthrobacter chlorophenolicus A6] gi|219860301|gb|ACL40643.1| ribosomal protein S17 [Arthrobacter chlorophenolicus A6] Length=101 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/89 (75%), Positives = 75/89 (85%), Gaps = 0/89 (0%) Query 48 TPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAG 107 T T + RG RKTR GYVVSDKM+KTIVVE+EDR++H LYGK+IR T KVKAHDE++ AG Sbjct 13 TAATAEQRGYRKTRRGYVVSDKMEKTIVVEVEDRVKHALYGKVIRRTSKVKAHDEENTAG 72 Query 108 IGDRVSLMETRPLSATKRWRLVEILEKAK 136 IGD V + ETRPLSATK WRLVEILEKAK Sbjct 73 IGDLVVIAETRPLSATKNWRLVEILEKAK 101 >gi|296130486|ref|YP_003637736.1| 30S ribosomal protein S17 [Cellulomonas flavigena DSM 20109] gi|296022301|gb|ADG75537.1| 30S ribosomal protein S17 [Cellulomonas flavigena DSM 20109] Length=96 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/91 (73%), Positives = 74/91 (82%), Gaps = 0/91 (0%) Query 46 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 105 +HT T R RKTR GYVVSDKM KT+VVE+EDR++HPLYGK+IR T KVK HDE + Sbjct 6 EHTTATADHRAYRKTRRGYVVSDKMDKTVVVEVEDRVKHPLYGKVIRRTSKVKVHDEQNS 65 Query 106 AGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 AGIGD V +METRPLSA KRWRLVEILEKAK Sbjct 66 AGIGDLVEIMETRPLSANKRWRLVEILEKAK 96 >gi|84494777|ref|ZP_00993896.1| 30S ribosomal protein S17 [Janibacter sp. HTCC2649] gi|84384270|gb|EAQ00150.1| 30S ribosomal protein S17 [Janibacter sp. HTCC2649] Length=97 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 67/98 (69%), Positives = 80/98 (82%), Gaps = 2/98 (2%) Query 39 AANVKGPKHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVK 98 + NVK T + R RKTR GYVVSDKM KT+VVE+EDR++H LYGK++R + KVK Sbjct 2 SENVKDE--TVAATEARNYRKTRQGYVVSDKMDKTVVVEVEDRVKHALYGKVLRRSSKVK 59 Query 99 AHDEDSVAGIGDRVSLMETRPLSATKRWRLVEILEKAK 136 AHDE++VAGIGDRV +METRPLSATKRWR+VEILEKAK Sbjct 60 AHDEENVAGIGDRVLIMETRPLSATKRWRVVEILEKAK 97 >gi|284033993|ref|YP_003383924.1| 30S ribosomal protein S17 [Kribbella flavida DSM 17836] gi|283813286|gb|ADB35125.1| ribosomal protein S17 [Kribbella flavida DSM 17836] Length=98 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/89 (74%), Positives = 75/89 (85%), Gaps = 0/89 (0%) Query 48 TPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAG 107 T T + RGRRKTR G V+SDKM KT+ VE+EDR++H LYGK+IR T K+KAHDE + AG Sbjct 10 TVSTTQARGRRKTREGLVLSDKMDKTVTVEVEDRVKHKLYGKVIRRTSKLKAHDEQNAAG 69 Query 108 IGDRVSLMETRPLSATKRWRLVEILEKAK 136 IGDRV LMETRPLSATKRWR+VEILEKAK Sbjct 70 IGDRVLLMETRPLSATKRWRIVEILEKAK 98 >gi|229821614|ref|YP_002883140.1| 30S ribosomal protein S17 [Beutenbergia cavernae DSM 12333] gi|229567527|gb|ACQ81378.1| ribosomal protein S17 [Beutenbergia cavernae DSM 12333] Length=99 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/82 (80%), Positives = 73/82 (90%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 R RKTR GYVVSDKMQKT+VVE+EDR++HPLYGK+IR T KVKAHDE S AG+GD V + Sbjct 18 RPNRKTRRGYVVSDKMQKTVVVEVEDRVKHPLYGKVIRRTTKVKAHDEASTAGVGDLVLI 77 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSATKRWR+VEILEKAK Sbjct 78 METRPLSATKRWRVVEILEKAK 99 >gi|319948714|ref|ZP_08022835.1| 30S ribosomal protein S17 [Dietzia cinnamea P4] gi|319437616|gb|EFV92615.1| 30S ribosomal protein S17 [Dietzia cinnamea P4] Length=91 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 62/82 (76%), Positives = 75/82 (92%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 R RK RIGYVVSDKM+KTIVVELEDR++HPLYGKI+R T++VKAHDE + AG+GDRV + Sbjct 10 RNSRKVRIGYVVSDKMEKTIVVELEDRVKHPLYGKIMRRTERVKAHDETNTAGVGDRVRI 69 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSA+KR+RLVE+LE+AK Sbjct 70 METRPLSASKRYRLVEVLERAK 91 >gi|331699167|ref|YP_004335406.1| 30S ribosomal protein S17 [Pseudonocardia dioxanivorans CB1190] gi|326953856|gb|AEA27553.1| 30S ribosomal protein S17 [Pseudonocardia dioxanivorans CB1190] Length=87 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 66/86 (77%), Positives = 72/86 (84%), Gaps = 0/86 (0%) Query 51 TPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGD 110 + RG RK R G VVSDKM KTIVV LEDR++HPLYGK+IR T KVKAHDE + AG+GD Sbjct 2 SDNTRGERKVREGLVVSDKMDKTIVVSLEDRVKHPLYGKVIRRTSKVKAHDEANTAGVGD 61 Query 111 RVSLMETRPLSATKRWRLVEILEKAK 136 RV LMETRPLSATKRWRLVEILEKAK Sbjct 62 RVRLMETRPLSATKRWRLVEILEKAK 87 >gi|256831836|ref|YP_003160563.1| 30S ribosomal protein S17 [Jonesia denitrificans DSM 20603] gi|256685367|gb|ACV08260.1| ribosomal protein S17 [Jonesia denitrificans DSM 20603] Length=90 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 65/82 (80%), Positives = 74/82 (91%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 R +RKTR GYVVSDKM+KTIVVE+EDR++HPLYGK++R T KVKAHDE + AGIGD V + Sbjct 9 RPQRKTRRGYVVSDKMEKTIVVEVEDRVKHPLYGKVMRRTSKVKAHDEQNTAGIGDLVLI 68 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSATKRWRLVEILEKAK Sbjct 69 METRPLSATKRWRLVEILEKAK 90 >gi|257054479|ref|YP_003132311.1| 30S ribosomal protein S17P [Saccharomonospora viridis DSM 43017] gi|256584351|gb|ACU95484.1| SSU ribosomal protein S17P [Saccharomonospora viridis DSM 43017] Length=93 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 66/82 (81%), Positives = 71/82 (87%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 R RK R G VVSDKM KTIVVELEDR +HPLYGK++RTTKKVKAHDE + AG+GDRV L Sbjct 12 RNYRKVREGLVVSDKMDKTIVVELEDRKKHPLYGKVMRTTKKVKAHDEQNTAGVGDRVLL 71 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSATKRWRLVEI EKAK Sbjct 72 METRPLSATKRWRLVEIREKAK 93 >gi|302543352|ref|ZP_07295694.1| 30S ribosomal protein S17 [Streptomyces hygroscopicus ATCC 53653] gi|302460970|gb|EFL24063.1| 30S ribosomal protein S17 [Streptomyces himastatinicus ATCC 53653] Length=95 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 64/89 (72%), Positives = 74/89 (84%), Gaps = 0/89 (0%) Query 48 TPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAG 107 T P+ RG RKTR G VVSDKM KT+VV +EDR++H LYGK+IR T K+KAHDE + AG Sbjct 7 TENAPQSRGFRKTREGLVVSDKMDKTVVVAVEDRVKHALYGKVIRRTNKLKAHDEQNAAG 66 Query 108 IGDRVSLMETRPLSATKRWRLVEILEKAK 136 +GDRV LMETRPLSATKRWR+VEILEKAK Sbjct 67 VGDRVLLMETRPLSATKRWRVVEILEKAK 95 >gi|302553551|ref|ZP_07305893.1| 30S ribosomal protein S17 [Streptomyces viridochromogenes DSM 40736] gi|329938223|ref|ZP_08287674.1| 30S ribosomal protein S17 [Streptomyces griseoaurantiacus M045] gi|302471169|gb|EFL34262.1| 30S ribosomal protein S17 [Streptomyces viridochromogenes DSM 40736] gi|329302712|gb|EGG46602.1| 30S ribosomal protein S17 [Streptomyces griseoaurantiacus M045] Length=95 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 64/89 (72%), Positives = 75/89 (85%), Gaps = 0/89 (0%) Query 48 TPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAG 107 T +T + RG RKTR G VVSDKM KT+VV +EDR++H LYGK+IR T K+KAHDE + AG Sbjct 7 TEQTAEARGFRKTREGLVVSDKMDKTVVVAVEDRVKHALYGKVIRRTNKLKAHDEQNAAG 66 Query 108 IGDRVSLMETRPLSATKRWRLVEILEKAK 136 +GDRV LMETRPLSATKRWR+VEILEKAK Sbjct 67 VGDRVLLMETRPLSATKRWRVVEILEKAK 95 >gi|163840897|ref|YP_001625302.1| SSU ribosomal protein S17P [Renibacterium salmoninarum ATCC 33209] gi|162954373|gb|ABY23888.1| SSU ribosomal protein S17P [Renibacterium salmoninarum ATCC 33209] Length=105 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 63/82 (77%), Positives = 73/82 (90%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 RG RKTR GYVVSDKMQKTIVV++EDR++H LYGK++R T KVKAHDE++ AGIGD V + Sbjct 24 RGYRKTRRGYVVSDKMQKTIVVQVEDRVKHALYGKVLRRTSKVKAHDEENSAGIGDLVLI 83 Query 115 METRPLSATKRWRLVEILEKAK 136 ETRPLSATKRWRLVE+LEKAK Sbjct 84 SETRPLSATKRWRLVEVLEKAK 105 >gi|119961764|ref|YP_948648.1| ribosomal protein S17 [Arthrobacter aurescens TC1] gi|119948623|gb|ABM07534.1| ribosomal protein S17 [Arthrobacter aurescens TC1] Length=98 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 63/86 (74%), Positives = 75/86 (88%), Gaps = 0/86 (0%) Query 51 TPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGD 110 + + RG RKTR GYVVSDKM+KTIVV++EDR++H LYGK+IR T K+KAHDE++ AGIGD Sbjct 13 SAEQRGYRKTRRGYVVSDKMEKTIVVQVEDRVKHALYGKVIRRTSKIKAHDEENTAGIGD 72 Query 111 RVSLMETRPLSATKRWRLVEILEKAK 136 V + ETRPLSATKRWRLVEILEKAK Sbjct 73 LVLISETRPLSATKRWRLVEILEKAK 98 >gi|269955444|ref|YP_003325233.1| 30S ribosomal protein S17 [Xylanimonas cellulosilytica DSM 15894] gi|269304125|gb|ACZ29675.1| ribosomal protein S17 [Xylanimonas cellulosilytica DSM 15894] Length=98 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 65/82 (80%), Positives = 72/82 (88%), Gaps = 0/82 (0%) Query 55 RGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSL 114 RG RKTR GYVVSDKM KTIVVE+EDR++HPLYGK++R T KVKAHDE + AG GD V + Sbjct 17 RGIRKTRRGYVVSDKMDKTIVVEVEDRVKHPLYGKVMRRTTKVKAHDEQNSAGTGDLVVI 76 Query 115 METRPLSATKRWRLVEILEKAK 136 METRPLSATKRWRLVEILEKAK Sbjct 77 METRPLSATKRWRLVEILEKAK 98 Lambda K H 0.313 0.127 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128858389450 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40