BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0713
Length=313
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607853|ref|NP_215227.1| transmembrane protein [Mycobacteriu... 630 6e-179
gi|306806537|ref|ZP_07443205.1| conserved membrane protein [Myco... 629 2e-178
gi|340625734|ref|YP_004744186.1| hypothetical protein MCAN_07181... 628 5e-178
gi|298524204|ref|ZP_07011613.1| conserved transmembrane protein ... 627 5e-178
gi|308396517|ref|ZP_07492333.2| conserved membrane protein [Myco... 557 7e-157
gi|240167717|ref|ZP_04746376.1| transmembrane protein [Mycobacte... 523 2e-146
gi|183981066|ref|YP_001849357.1| transmembrane protein [Mycobact... 496 2e-138
gi|118616582|ref|YP_904914.1| transmembrane protein [Mycobacteri... 495 3e-138
gi|342861804|ref|ZP_08718449.1| hypothetical protein MCOL_23060 ... 387 1e-105
gi|336460656|gb|EGO39547.1| hypothetical protein MAPs_38580 [Myc... 382 4e-104
gi|118462593|ref|YP_883594.1| hypothetical protein MAV_4459 [Myc... 380 2e-103
gi|254776895|ref|ZP_05218411.1| hypothetical protein MaviaA2_198... 380 2e-103
gi|41410271|ref|NP_963107.1| hypothetical protein MAP4173 [Mycob... 379 4e-103
gi|240167716|ref|ZP_04746375.1| hypothetical protein MkanA1_0027... 375 4e-102
gi|342861806|ref|ZP_08718451.1| hypothetical protein MCOL_23070 ... 349 4e-94
gi|41410273|ref|NP_963109.1| hypothetical protein MAP4175 [Mycob... 345 7e-93
gi|254776893|ref|ZP_05218409.1| hypothetical protein MaviaA2_198... 344 1e-92
gi|118466993|ref|YP_883592.1| hypothetical protein MAV_4457 [Myc... 342 4e-92
gi|296168569|ref|ZP_06850373.1| transmembrane protein [Mycobacte... 321 1e-85
gi|342861802|ref|ZP_08718447.1| hypothetical protein MCOL_23050 ... 311 6e-83
gi|145222595|ref|YP_001133273.1| hypothetical protein Mflv_2007 ... 282 6e-74
gi|169628549|ref|YP_001702198.1| hypothetical protein MAB_1458 [... 258 9e-67
gi|315444698|ref|YP_004077577.1| hypothetical protein Mspyr1_312... 216 3e-54
gi|145224366|ref|YP_001135044.1| hypothetical protein Mflv_3784 ... 215 6e-54
gi|254818862|ref|ZP_05223863.1| hypothetical protein MintA_02999... 158 1e-36
gi|343924936|ref|ZP_08764472.1| hypothetical protein GOALK_029_0... 156 4e-36
gi|296168760|ref|ZP_06850451.1| conserved hypothetical protein [... 154 2e-35
gi|118464448|ref|YP_883511.1| hypothetical protein MAV_4376 [Myc... 151 1e-34
gi|41410352|ref|NP_963188.1| hypothetical protein MAP4254 [Mycob... 151 1e-34
gi|254776806|ref|ZP_05218322.1| hypothetical protein MaviaA2_193... 150 2e-34
gi|342861891|ref|ZP_08718536.1| hypothetical protein MCOL_23495 ... 150 2e-34
gi|226359618|ref|YP_002777396.1| hypothetical protein ROP_02040 ... 144 2e-32
gi|312140169|ref|YP_004007505.1| integral membrane protein [Rhod... 139 7e-31
gi|183981135|ref|YP_001849426.1| hypothetical protein MMAR_1115 ... 138 1e-30
gi|111017104|ref|YP_700076.1| hypothetical protein RHA1_ro00082 ... 138 1e-30
gi|289555707|ref|ZP_06444917.1| conserved membrane protein [Myco... 136 4e-30
gi|15610571|ref|NP_217952.1| transmembrane protein [Mycobacteriu... 136 5e-30
gi|148824645|ref|YP_001289399.1| transmembrane protein [Mycobact... 136 5e-30
gi|339296259|gb|AEJ48370.1| conserved membrane protein [Mycobact... 136 5e-30
gi|340628406|ref|YP_004746858.1| hypothetical protein MCAN_34521... 135 7e-30
gi|296168761|ref|ZP_06850452.1| conserved hypothetical protein [... 135 1e-29
gi|15843030|ref|NP_338067.1| hypothetical protein MT3541 [Mycoba... 134 2e-29
gi|323359228|ref|YP_004225624.1| hypothetical protein MTES_2780 ... 108 8e-22
gi|254234031|ref|ZP_04927356.1| hypothetical protein TBCG_03374 ... 105 7e-21
gi|2344842|emb|CAB11444.1| hypothetical protein [Mycobacterium l... 96.3 6e-18
gi|258652429|ref|YP_003201585.1| hypothetical protein Namu_2219 ... 86.3 6e-15
gi|217977911|ref|YP_002362058.1| hypothetical protein Msil_1750 ... 66.2 6e-09
gi|163841914|ref|YP_001626319.1| hypothetical protein RSal33209_... 62.8 6e-08
gi|217976399|ref|YP_002360546.1| hypothetical protein Msil_0203 ... 62.4 9e-08
gi|328766375|gb|EGF76430.1| hypothetical protein BATDEDRAFT_9272... 60.8 2e-07
>gi|15607853|ref|NP_215227.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|15840120|ref|NP_335157.1| hypothetical protein MT0740 [Mycobacterium tuberculosis CDC1551]
gi|31791899|ref|NP_854392.1| transmembrane protein [Mycobacterium bovis AF2122/97]
70 more sequence titles
Length=313
Score = 630 bits (1626), Expect = 6e-179, Method: Compositional matrix adjust.
Identities = 313/313 (100%), Positives = 313/313 (100%), Gaps = 0/313 (0%)
Query 1 MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH 60
MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH
Sbjct 1 MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH 60
Query 61 TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL 120
TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL
Sbjct 61 TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL 120
Query 121 YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA 180
YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA
Sbjct 121 YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA 180
Query 181 RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL 240
RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL
Sbjct 181 RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL 240
Query 241 FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA 300
FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA
Sbjct 241 FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA 300
Query 301 MVVYIVAWYRESD 313
MVVYIVAWYRESD
Sbjct 301 MVVYIVAWYRESD 313
>gi|306806537|ref|ZP_07443205.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308347014|gb|EFP35865.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
Length=313
Score = 629 bits (1621), Expect = 2e-178, Method: Compositional matrix adjust.
Identities = 312/313 (99%), Positives = 312/313 (99%), Gaps = 0/313 (0%)
Query 1 MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH 60
MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH
Sbjct 1 MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH 60
Query 61 TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL 120
TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL
Sbjct 61 TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL 120
Query 121 YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA 180
YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA
Sbjct 121 YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA 180
Query 181 RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL 240
RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL
Sbjct 181 RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL 240
Query 241 FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA 300
FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA
Sbjct 241 FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA 300
Query 301 MVVYIVAWYRESD 313
MVVYI AWYRESD
Sbjct 301 MVVYIFAWYRESD 313
>gi|340625734|ref|YP_004744186.1| hypothetical protein MCAN_07181 [Mycobacterium canettii CIPT
140010059]
gi|340003924|emb|CCC43058.1| putative conserved transmembrane protein [Mycobacterium canettii
CIPT 140010059]
Length=313
Score = 628 bits (1619), Expect = 5e-178, Method: Compositional matrix adjust.
Identities = 311/313 (99%), Positives = 312/313 (99%), Gaps = 0/313 (0%)
Query 1 MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH 60
MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH
Sbjct 1 MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH 60
Query 61 TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL 120
TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRL+VLTTDTSVRL
Sbjct 61 TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLEVLTTDTSVRL 120
Query 121 YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA 180
YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA
Sbjct 121 YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA 180
Query 181 RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL 240
RVEVTGSLEGWDIS VRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL
Sbjct 181 RVEVTGSLEGWDISVVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL 240
Query 241 FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA 300
FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA
Sbjct 241 FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA 300
Query 301 MVVYIVAWYRESD 313
MVVYIVAWYRESD
Sbjct 301 MVVYIVAWYRESD 313
>gi|298524204|ref|ZP_07011613.1| conserved transmembrane protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493998|gb|EFI29292.1| conserved transmembrane protein [Mycobacterium tuberculosis 94_M4241A]
Length=313
Score = 627 bits (1618), Expect = 5e-178, Method: Compositional matrix adjust.
Identities = 312/313 (99%), Positives = 312/313 (99%), Gaps = 0/313 (0%)
Query 1 MAGSDPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH 60
MAGS PPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH
Sbjct 1 MAGSYPPTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAH 60
Query 61 TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL 120
TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL
Sbjct 61 TPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRL 120
Query 121 YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA 180
YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA
Sbjct 121 YPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPA 180
Query 181 RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL 240
RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL
Sbjct 181 RVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLAL 240
Query 241 FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA 300
FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA
Sbjct 241 FVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAA 300
Query 301 MVVYIVAWYRESD 313
MVVYIVAWYRESD
Sbjct 301 MVVYIVAWYRESD 313
>gi|308396517|ref|ZP_07492333.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|308367090|gb|EFP55941.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|339293740|gb|AEJ45851.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339297379|gb|AEJ49489.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180]
Length=279
Score = 557 bits (1436), Expect = 7e-157, Method: Compositional matrix adjust.
Identities = 278/279 (99%), Positives = 279/279 (100%), Gaps = 0/279 (0%)
Query 35 VLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDV 94
+LDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDV
Sbjct 1 MLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDV 60
Query 95 KVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWP 154
KVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWP
Sbjct 61 KVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWP 120
Query 155 FDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRPDNVIIT 214
FDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRPDNVIIT
Sbjct 121 FDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRPDNVIIT 180
Query 215 LKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTI 274
LKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTI
Sbjct 181 LKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTI 240
Query 275 LPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
LPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD
Sbjct 241 LPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 279
>gi|240167717|ref|ZP_04746376.1| transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=321
Score = 523 bits (1346), Expect = 2e-146, Method: Compositional matrix adjust.
Identities = 256/307 (84%), Positives = 276/307 (90%), Gaps = 0/307 (0%)
Query 7 PTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLP 66
P G AS G A + HMSRRKHLVLDV II+GV + YV SL+GY WLA TPGPLP
Sbjct 15 PAGTTASPPGGSAASPSARPHMSRRKHLVLDVSIIVGVAVVYVLSLVGYHWLASTPGPLP 74
Query 67 QPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENEL 126
+PDVGTT+DTVVL+RFE+LHTVANRLDVKVLV+PDDSMID RL VLTTDTSVRLYP N+L
Sbjct 75 KPDVGTTEDTVVLVRFEQLHTVANRLDVKVLVMPDDSMIDKRLDVLTTDTSVRLYPTNDL 134
Query 127 GDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTG 186
GDLQYPVGK PAQVATTIEAHG+PG WPFDTYTTDT+QADVLVGAGD RQY PARVEVTG
Sbjct 135 GDLQYPVGKSPAQVATTIEAHGDPGNWPFDTYTTDTIQADVLVGAGDTRQYKPARVEVTG 194
Query 187 SLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQM 246
SLEGWDISA RVG++SQTSDRPDNVIITLKRAKGPLVFDLGICLVL+TLPTLALFVAIQM
Sbjct 195 SLEGWDISAQRVGDASQTSDRPDNVIITLKRAKGPLVFDLGICLVLVTLPTLALFVAIQM 254
Query 247 ITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIV 306
+TGRRKF PPF TWYAAMLFAVVPLR ILPGSPPAG+WID+AVVIWVLIALA AMVVY++
Sbjct 255 VTGRRKFLPPFSTWYAAMLFAVVPLRNILPGSPPAGSWIDQAVVIWVLIALATAMVVYVI 314
Query 307 AWYRESD 313
AWYRESD
Sbjct 315 AWYRESD 321
>gi|183981066|ref|YP_001849357.1| transmembrane protein [Mycobacterium marinum M]
gi|183174392|gb|ACC39502.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=312
Score = 496 bits (1276), Expect = 2e-138, Method: Compositional matrix adjust.
Identities = 247/291 (85%), Positives = 266/291 (92%), Gaps = 0/291 (0%)
Query 23 PEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRF 82
PE K MSRRKHLVLD II+GV++ Y+FSL+GY WLA TPGPLP+PDVGTTDDTVVL+RF
Sbjct 22 PEPKQMSRRKHLVLDTTIIVGVIVVYIFSLVGYHWLASTPGPLPKPDVGTTDDTVVLVRF 81
Query 83 EELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVAT 142
E LHTVANRLDVKVLV+PDDSMIDHRL VLT DTSVR YPENELGDLQYPVGK PAQVAT
Sbjct 82 EALHTVANRLDVKVLVMPDDSMIDHRLNVLTVDTSVRFYPENELGDLQYPVGKSPAQVAT 141
Query 143 TIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESS 202
TIEAHG+PG WPFD YTTDT+QADVLVG G+NRQY RVEVTGSLEGWDIS RVG++S
Sbjct 142 TIEAHGDPGNWPFDRYTTDTIQADVLVGTGENRQYKATRVEVTGSLEGWDISVERVGDAS 201
Query 203 QTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYA 262
QTSDRPDNVI+T +RAKGPLVFDLGICLVLITLPTLALFVAIQMIT RRKFQPPFGTWYA
Sbjct 202 QTSDRPDNVIVTFQRAKGPLVFDLGICLVLITLPTLALFVAIQMITRRRKFQPPFGTWYA 261
Query 263 AMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
AMLFAVVPLR ILPGSPPAGAWID+A+VIWVLIALA AMVVY+VAWYR S+
Sbjct 262 AMLFAVVPLRNILPGSPPAGAWIDQAIVIWVLIALATAMVVYVVAWYRVSE 312
>gi|118616582|ref|YP_904914.1| transmembrane protein [Mycobacterium ulcerans Agy99]
gi|118568692|gb|ABL03443.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
Length=312
Score = 495 bits (1275), Expect = 3e-138, Method: Compositional matrix adjust.
Identities = 246/291 (85%), Positives = 267/291 (92%), Gaps = 0/291 (0%)
Query 23 PEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRF 82
P+ KHMSRRKHLVLD II+GV++ Y+FSL+GY WLA TPGPLP+PDVGTTDDTVVL+RF
Sbjct 22 PKPKHMSRRKHLVLDTTIIVGVIVVYIFSLVGYHWLASTPGPLPKPDVGTTDDTVVLVRF 81
Query 83 EELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVAT 142
E LHTVANRLDVKVLV+PDDSMIDHRL VLT DTSVR YPENELGDLQYPVGK PAQVAT
Sbjct 82 EALHTVANRLDVKVLVMPDDSMIDHRLNVLTVDTSVRFYPENELGDLQYPVGKSPAQVAT 141
Query 143 TIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESS 202
TIEAHG+PG WPFD YTTDT+QADVLVG G+NRQY RVEVTGSLEGWDIS RVG++S
Sbjct 142 TIEAHGDPGNWPFDRYTTDTIQADVLVGTGENRQYKDTRVEVTGSLEGWDISVERVGDAS 201
Query 203 QTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYA 262
QTSDRPDNVI+T +RAKGPLVFDLGICLVLITLPTLALFVAIQMIT RRKFQPPFGTWYA
Sbjct 202 QTSDRPDNVIVTFQRAKGPLVFDLGICLVLITLPTLALFVAIQMITRRRKFQPPFGTWYA 261
Query 263 AMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
AMLFAVVPLR ILPGSPPAGAWID+A+VIWVLIALA AM+VY+VAWYR S+
Sbjct 262 AMLFAVVPLRNILPGSPPAGAWIDQAIVIWVLIALATAMMVYVVAWYRVSE 312
>gi|342861804|ref|ZP_08718449.1| hypothetical protein MCOL_23060 [Mycobacterium colombiense CECT
3035]
gi|342130621|gb|EGT83925.1| hypothetical protein MCOL_23060 [Mycobacterium colombiense CECT
3035]
Length=314
Score = 387 bits (993), Expect = 1e-105, Method: Compositional matrix adjust.
Identities = 185/284 (66%), Positives = 222/284 (79%), Gaps = 0/284 (0%)
Query 30 RRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVA 89
R++ V+ + + G + YV SL G LA T GPL PD+ T DTVVL+R E+L TVA
Sbjct 31 RKRRRVIAIAAVAGFVAVYVLSLFGVHLLAQTAGPLKPPDLNATSDTVVLVRLEKLDTVA 90
Query 90 NRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGN 149
NRL VKVLV+P++SM D RL VL TDT+VR+ P N+LGDLQYP GK PAQVATTIEA GN
Sbjct 91 NRLTVKVLVIPEESMFDKRLDVLKTDTAVRMDPPNDLGDLQYPAGKSPAQVATTIEARGN 150
Query 150 PGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRPD 209
P WPFD+Y+TDT+ ADVLVG GD R+Y+PARVEVTG L+GWD+ RVGE+SQ SDR D
Sbjct 151 PNNWPFDSYSTDTLSADVLVGQGDARRYIPARVEVTGGLDGWDVGVQRVGEASQDSDRAD 210
Query 210 NVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVV 269
NVIITL RAKGPL+FDLGICLVL LP LA V IQ+ GRRKF PPF TW+AA+LFAV+
Sbjct 211 NVIITLHRAKGPLIFDLGICLVLFALPALAFAVVIQVALGRRKFVPPFVTWFAALLFAVI 270
Query 270 PLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
P+R LPG+PP GAWID+ +V+WVLIAL AAM +Y++ WYR+SD
Sbjct 271 PIRNFLPGAPPPGAWIDQVLVLWVLIALVAAMALYMLTWYRQSD 314
>gi|336460656|gb|EGO39547.1| hypothetical protein MAPs_38580 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=313
Score = 382 bits (981), Expect = 4e-104, Method: Compositional matrix adjust.
Identities = 179/274 (66%), Positives = 220/274 (81%), Gaps = 0/274 (0%)
Query 40 IILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVL 99
++LG + YV SL G LA T GPL PD+ T DTVVL+R E+L T+ANRL VKVLV+
Sbjct 40 VVLGFVAVYVLSLFGVHLLAKTAGPLKPPDLNATSDTVVLVRLEKLDTIANRLTVKVLVI 99
Query 100 PDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYT 159
P++SM D RL VLTTDT+VR+ P N+LGDLQYP GK PAQVATTIEAHGNP WPFD+Y
Sbjct 100 PEESMFDKRLDVLTTDTAVRMDPPNDLGDLQYPAGKSPAQVATTIEAHGNPNNWPFDSYR 159
Query 160 TDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAK 219
TDT+ A+VLVG GD R Y+PARVEVTG L+GWD+S RVGE+SQ SDR DNVIITL R+K
Sbjct 160 TDTMSAEVLVGQGDTRHYIPARVEVTGGLDGWDVSVQRVGEASQESDRADNVIITLHRSK 219
Query 220 GPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSP 279
L+FD GICLVL LP +AL +A+ M+TG+R F PPF TW+AA+LFAV+P+R LPGSP
Sbjct 220 STLIFDAGICLVLFALPAMALTIALLMLTGKRGFLPPFVTWFAALLFAVIPIRNFLPGSP 279
Query 280 PAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
PAGAW+D+A+V+WVLIAL A+MV++++ WYR +D
Sbjct 280 PAGAWVDQALVLWVLIALVASMVLFLITWYRRTD 313
>gi|118462593|ref|YP_883594.1| hypothetical protein MAV_4459 [Mycobacterium avium 104]
gi|118163880|gb|ABK64777.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=313
Score = 380 bits (975), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 178/274 (65%), Positives = 219/274 (80%), Gaps = 0/274 (0%)
Query 40 IILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVL 99
++LG + YV SL G LA T GPL PD+ T DTVVL+R E+L T+ANRL VKVLV+
Sbjct 40 VVLGFVAVYVLSLFGVHLLAKTAGPLKPPDLNATSDTVVLVRLEKLDTIANRLTVKVLVI 99
Query 100 PDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYT 159
P++SM D RL VLTTDT+VR+ P N+LGDLQYP GK PAQVATTIEAHGNP WPFD+Y
Sbjct 100 PEESMFDKRLDVLTTDTAVRMDPPNDLGDLQYPAGKSPAQVATTIEAHGNPNNWPFDSYR 159
Query 160 TDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAK 219
TDT+ A+VLVG GD R Y+PARVEVTG L+GWD+S RVGE+SQ SDR DNVIITL R+K
Sbjct 160 TDTMSAEVLVGQGDARHYIPARVEVTGGLDGWDVSVQRVGEASQESDRADNVIITLHRSK 219
Query 220 GPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSP 279
L+FD GICLVL LP +AL +A+ M+TG+R F PPF TW+AA+LFAV+P+R LPGSP
Sbjct 220 STLIFDAGICLVLFALPAMALTIALLMLTGKRGFLPPFVTWFAALLFAVIPIRNFLPGSP 279
Query 280 PAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
PAGAW+D+A+V+WVLIAL +MV++++ WYR +D
Sbjct 280 PAGAWVDQALVLWVLIALVTSMVLFLITWYRRTD 313
>gi|254776895|ref|ZP_05218411.1| hypothetical protein MaviaA2_19821 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=301
Score = 380 bits (975), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 178/274 (65%), Positives = 219/274 (80%), Gaps = 0/274 (0%)
Query 40 IILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVL 99
++LG + YV SL G LA T GPL PD+ T DTVVL+R E+L T+ANRL VKVLV+
Sbjct 28 VVLGFVAVYVLSLFGVHLLAKTAGPLKPPDLNATSDTVVLVRLEKLDTIANRLTVKVLVI 87
Query 100 PDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYT 159
P++SM D RL VLTTDT+VR+ P N+LGDLQYP GK PAQVATTIEAHGNP WPFD+Y
Sbjct 88 PEESMFDKRLDVLTTDTAVRMDPPNDLGDLQYPAGKSPAQVATTIEAHGNPNNWPFDSYR 147
Query 160 TDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAK 219
TDT+ A+VLVG GD R Y+PARVEVTG L+GWD+S RVGE+SQ SDR DNVIITL R+K
Sbjct 148 TDTMSAEVLVGQGDARHYIPARVEVTGGLDGWDVSVQRVGEASQESDRADNVIITLHRSK 207
Query 220 GPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSP 279
L+FD GICLVL LP +AL +A+ M+TG+R F PPF TW+AA+LFAV+P+R LPGSP
Sbjct 208 STLIFDAGICLVLFALPAMALTIALLMLTGKRGFLPPFVTWFAALLFAVIPIRNFLPGSP 267
Query 280 PAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
PAGAW+D+A+V+WVLIAL +MV++++ WYR +D
Sbjct 268 PAGAWVDQALVLWVLIALVTSMVLFLITWYRRTD 301
>gi|41410271|ref|NP_963107.1| hypothetical protein MAP4173 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399105|gb|AAS06723.1| hypothetical protein MAP_4173 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=313
Score = 379 bits (972), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 178/274 (65%), Positives = 219/274 (80%), Gaps = 0/274 (0%)
Query 40 IILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVL 99
++LG + YV SL G LA T GPL PD+ T DTVVL+R E+L T+ANRL VKVLV+
Sbjct 40 VVLGFVAVYVLSLFGVHLLAKTAGPLKPPDLNATSDTVVLVRLEKLDTIANRLTVKVLVI 99
Query 100 PDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYT 159
P++SM D RL VLTTDT+VR+ P N+LGDLQYP GK PAQVATTIEAHGNP WPF +Y
Sbjct 100 PEESMFDKRLDVLTTDTAVRMDPPNDLGDLQYPAGKSPAQVATTIEAHGNPNNWPFYSYR 159
Query 160 TDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAK 219
TDT+ A+VLVG GD R Y+PARVEVTG L+GWD+S RVGE+SQ SDR DNVIITL R+K
Sbjct 160 TDTMSAEVLVGQGDTRHYIPARVEVTGGLDGWDVSVQRVGEASQESDRADNVIITLHRSK 219
Query 220 GPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSP 279
L+FD GICLVL LP +AL +A+ M+TG+R F PPF TW+AA+LFAV+P+R LPGSP
Sbjct 220 STLIFDAGICLVLFALPAMALTIALLMLTGKRGFLPPFVTWFAALLFAVIPIRNFLPGSP 279
Query 280 PAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
PAGAW+D+A+V+WVLIAL A+MV++++ WYR +D
Sbjct 280 PAGAWVDQALVLWVLIALVASMVLFLITWYRRTD 313
>gi|240167716|ref|ZP_04746375.1| hypothetical protein MkanA1_00270 [Mycobacterium kansasii ATCC
12478]
Length=300
Score = 375 bits (963), Expect = 4e-102, Method: Compositional matrix adjust.
Identities = 182/285 (64%), Positives = 224/285 (79%), Gaps = 0/285 (0%)
Query 29 SRRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTV 88
SR L + + ++LG+++ Y SL G LA + PLP+PD+GTT+DTVV +R E+L TV
Sbjct 16 SRGTRLAIGLAVVLGIIVVYALSLFGVHLLATSAPPLPEPDLGTTEDTVVQVRLEKLETV 75
Query 89 ANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHG 148
ANRL V VLV+P+DS D L VLT D +VRLYPEN+LGDLQYPVGK PAQV+T IEA G
Sbjct 76 ANRLTVNVLVIPEDSKFDKHLDVLTQDLAVRLYPENDLGDLQYPVGKTPAQVSTAIEAEG 135
Query 149 NPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRP 208
+P WPFD+YTT + ADV+VG G++R PARVEV GSL+GWD+S RVGESSQT+ RP
Sbjct 136 DPANWPFDSYTTGIISADVIVGTGESRVKEPARVEVIGSLDGWDVSVQRVGESSQTTSRP 195
Query 209 DNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAV 268
DNVIITL RAKG L+FDLGI LVLI+LPTL L+V+I M GR+KF PPF +W+AAMLFAV
Sbjct 196 DNVIITLHRAKGSLIFDLGIILVLISLPTLGLWVSIPMALGRKKFLPPFVSWFAAMLFAV 255
Query 269 VPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
VPLR ILPG+PP G+WID+AV +WVLIAL AM ++I A+ R+SD
Sbjct 256 VPLRNILPGNPPPGSWIDQAVTLWVLIALIVAMSLFIFAYRRQSD 300
>gi|342861806|ref|ZP_08718451.1| hypothetical protein MCOL_23070 [Mycobacterium colombiense CECT
3035]
gi|342130623|gb|EGT83927.1| hypothetical protein MCOL_23070 [Mycobacterium colombiense CECT
3035]
Length=311
Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 176/288 (62%), Positives = 214/288 (75%), Gaps = 8/288 (2%)
Query 33 HLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDV--GTTDDTVVLIRFEELHTVAN 90
+ + VCI+ V++ YV SL G +L + GPLP D+ G D T+V +R EEL VAN
Sbjct 25 RIAIGVCILAAVIVVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDATIVQLRLEELKPVAN 84
Query 91 RLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNP 150
RL V+VL P + D+R VL D +VRLYP ++LGDLQYP GK PAQ++TTIEAHG+P
Sbjct 85 RLSVEVLAYPGIAQYDNRFDVLANDVAVRLYPTSDLGDLQYPKGKAPAQLSTTIEAHGDP 144
Query 151 GAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGE-----SSQTS 205
G WPFD+Y T+ + AD VG GDNR+ VPARVEVTG+L+GW IS RV + +S+ S
Sbjct 145 GNWPFDSYQTEPIAADAFVGTGDNRKKVPARVEVTGALDGWQISVNRVHDPSALPTSRAS 204
Query 206 DRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAML 265
D NV+ITLKRAKGPL+FDLGICLVLI+LPTLAL VAI M GRRKF PPF TWYAA L
Sbjct 205 DN-GNVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMALGRRKFLPPFATWYAANL 263
Query 266 FAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
FA+VPLR ILPG+PP G+WID+A+V WVLIAL AAM +YIVAW R+ D
Sbjct 264 FAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMSLYIVAWIRQGD 311
>gi|41410273|ref|NP_963109.1| hypothetical protein MAP4175 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399107|gb|AAS06725.1| hypothetical protein MAP_4175 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460654|gb|EGO39545.1| hypothetical protein MAPs_38560 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=306
Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 177/302 (59%), Positives = 219/302 (73%), Gaps = 9/302 (2%)
Query 19 AGASPEHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDV--GTTDDT 76
A +P K R + + + VCI+ GV+I YV SL G +L + GPLP D+ G D T
Sbjct 7 AAQAPVTKKRDRPR-IAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDAT 65
Query 77 VVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKL 136
+V +R EEL VANRL V VLV P + D+R VL D +VRLYP ++LGDL YP GK
Sbjct 66 IVQLRLEELKPVANRLSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKA 125
Query 137 PAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAV 196
PAQ++TT+EAHG+PG WPFD+Y T+ + AD VG+GDN + VPARVEVTG+L+GW I+
Sbjct 126 PAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGSGDNLKKVPARVEVTGALDGWQITVD 185
Query 197 RVGE-----SSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRR 251
RV + + + SD D V+ITLKRAKGPL+FDLGICLVLI+LPTLAL VAI M GRR
Sbjct 186 RVRDPAALPTQRGSDNGD-VVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMAMGRR 244
Query 252 KFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
KF PPF TWYAA LFA+VPLR ILPG+PP G+WID+A+V WVLIAL AAM +YI+AW R+
Sbjct 245 KFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAWVRQ 304
Query 312 SD 313
D
Sbjct 305 GD 306
>gi|254776893|ref|ZP_05218409.1| hypothetical protein MaviaA2_19811 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=295
Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 214/290 (74%), Gaps = 8/290 (2%)
Query 31 RKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDV--GTTDDTVVLIRFEELHTV 88
R + + VCI+ GV+I YV SL G +L + GPLP D+ G D T+V +R EEL V
Sbjct 7 RPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDATIVQLRLEELKPV 66
Query 89 ANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHG 148
ANRL V VLV P + D+R VL D +VRLYP ++LGDL YP GK PAQ++TT+EAHG
Sbjct 67 ANRLSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHG 126
Query 149 NPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGE-----SSQ 203
+PG WPFD+Y T+ + AD VG+GDN + VPARVEVTG+L+GW I+ RV + + +
Sbjct 127 DPGNWPFDSYRTEPISADAFVGSGDNLKKVPARVEVTGALDGWQITVDRVRDPAALPTQR 186
Query 204 TSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAA 263
SD D V+ITLKRAKGPL+FDLGICLVLI+LPTLAL VAI M GRRKF PPF TWYAA
Sbjct 187 GSDNGD-VVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMAMGRRKFLPPFATWYAA 245
Query 264 MLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
LFA+VPLR ILPG+PP G+WID+A+V WVLIAL AAM +YI+AW R+ D
Sbjct 246 NLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAWVRQGD 295
>gi|118466993|ref|YP_883592.1| hypothetical protein MAV_4457 [Mycobacterium avium 104]
gi|118168280|gb|ABK69177.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=295
Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/290 (60%), Positives = 213/290 (74%), Gaps = 8/290 (2%)
Query 31 RKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDV--GTTDDTVVLIRFEELHTV 88
R + + VCI+ GV+I YV SL G +L + GPLP D+ G D T+V +R EEL V
Sbjct 7 RPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDATIVQLRLEELKPV 66
Query 89 ANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHG 148
ANRL V VLV P + D+R VL D +VRLYP ++LGDL YP GK PAQ++TT+EAHG
Sbjct 67 ANRLSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHG 126
Query 149 NPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGE-----SSQ 203
+PG WPFD+Y T+ + AD VG+GDN + VPARVEVTG+L+GW I+ RV + + +
Sbjct 127 DPGNWPFDSYRTEPISADAFVGSGDNLKKVPARVEVTGALDGWQITVDRVRDPAALPTQR 186
Query 204 TSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAA 263
SD D V+ITLKRAKGPL+FDLGICLVLI+LPTLAL VAI M GRRKF PPF TWYAA
Sbjct 187 GSDNGD-VVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMAMGRRKFLPPFATWYAA 245
Query 264 MLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
LFA+VPLR ILPG+PP G+WID+A+V WVLIAL AM +YI+AW R+ D
Sbjct 246 NLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVTAMTLYIIAWVRQGD 295
>gi|296168569|ref|ZP_06850373.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896632|gb|EFG76271.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=311
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/287 (56%), Positives = 202/287 (71%), Gaps = 3/287 (1%)
Query 30 RRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGT--TDDTVVLIRFEELHT 87
R + + + I+ +++ Y SL+ LA + LP D+ DD+VV +R E+L T
Sbjct 18 RGRQIAIAFGIVAALIVIYALSLIAVHLLAKSAPALPSVDLSKVEADDSVVQVRLEKLDT 77
Query 88 VANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAH 147
VANRL V V V P DS+ D VLTTD +VRLYP+N+LGDLQYPVGK PAQV+TTI AH
Sbjct 78 VANRLTVNVTVYPKDSLYDKNFGVLTTDAAVRLYPDNDLGDLQYPVGKAPAQVSTTIVAH 137
Query 148 GNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTS-D 206
G+P WPFDTY T+ + ADV G G NR+ PARVE TG L+GWD + R+ + + D
Sbjct 138 GDPANWPFDTYKTEVIAADVFTGTGANREKAPARVEATGKLDGWDATVTRIHDPEDANPD 197
Query 207 RPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLF 266
D+++ITL+R+KG L+FD+GICLVLI LP LAL+VAI M GR F PP GTW+AA+LF
Sbjct 198 VQDDIVITLQRSKGALIFDVGICLVLIALPVLALWVAIPMALGRTTFLPPLGTWFAALLF 257
Query 267 AVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
AVVPLR LPGSPP G+WID+AVV+WVLI L AM ++IVAW+R +
Sbjct 258 AVVPLRNFLPGSPPPGSWIDQAVVLWVLIGLVTAMSLFIVAWWRSRE 304
>gi|342861802|ref|ZP_08718447.1| hypothetical protein MCOL_23050 [Mycobacterium colombiense CECT
3035]
gi|342130619|gb|EGT83923.1| hypothetical protein MCOL_23050 [Mycobacterium colombiense CECT
3035]
Length=308
Score = 311 bits (798), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/287 (53%), Positives = 202/287 (71%), Gaps = 3/287 (1%)
Query 30 RRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGT--TDDTVVLIRFEELHT 87
R + + + + + +++ YV SL+ LA + PLP D+ +D+VV +R E+L
Sbjct 15 RGRQIAIAIGAVASLIVIYVLSLIAVHLLAKSAPPLPAVDLSKVEAEDSVVQVRLEKLDP 74
Query 88 VANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAH 147
VANRL V VLV P D++ D VLT D +VRLYP+N+LGDLQYP+GK PAQV TTIEAH
Sbjct 75 VANRLTVNVLVYPKDTLYDKNFGVLTADAAVRLYPDNDLGDLQYPIGKAPAQVTTTIEAH 134
Query 148 GNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTS-D 206
G+P WPFD+Y T + ADV G+G N++ ARVE TG L+GWD + RV ++ + D
Sbjct 135 GDPANWPFDSYRTGVISADVFTGSGANKEKTAARVEATGGLDGWDATVTRVHDAEDNNPD 194
Query 207 RPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLF 266
D+++ITL RAKG L+FD+GICLVLI+LP LAL+VAI + GR F PP TWY AMLF
Sbjct 195 VKDDLVITLHRAKGQLIFDVGICLVLISLPVLALWVAIPVALGRTSFLPPLTTWYGAMLF 254
Query 267 AVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
A+VPLR ILPGSPP G+W+D+A+V+WVLI L A+ +++V W+R+ D
Sbjct 255 AIVPLRNILPGSPPYGSWVDQAIVLWVLIGLVGALTLFLVGWWRQRD 301
>gi|145222595|ref|YP_001133273.1| hypothetical protein Mflv_2007 [Mycobacterium gilvum PYR-GCK]
gi|315443060|ref|YP_004075939.1| hypothetical protein Mspyr1_14300 [Mycobacterium sp. Spyr1]
gi|145215081|gb|ABP44485.1| putative conserved transmembrane protein [Mycobacterium gilvum
PYR-GCK]
gi|315261363|gb|ADT98104.1| hypothetical protein Mspyr1_14300 [Mycobacterium sp. Spyr1]
Length=286
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/287 (50%), Positives = 189/287 (66%), Gaps = 8/287 (2%)
Query 24 EHKHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFE 83
E +H RR+ + I+G++ YV SL GY W++ + LP D ++ VV I
Sbjct 4 EVRHPLRRRIRITSSLAIVGLI--YVASLFGYWWVSSSYPALPAFDPSRSEQPVVSIDMG 61
Query 84 ELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATT 143
+HT +N L+V VL++P ID L VL TD ++RLYP +LG+L++P G+ P + T
Sbjct 62 SIHTTSNELEVSVLLIPPQRYIDPELGVLNTDIAIRLYPWVDLGELKFPKGQTPGSIDAT 121
Query 144 IEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQ 203
IEAHG+ WPFD YTT + AD LVG+GD+R PA V +G +EGW++ E Q
Sbjct 122 IEAHGDADNWPFDNYTTKPLTADALVGSGDDRTVQPAEVRFSGGIEGWNV------EIKQ 175
Query 204 TSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAA 263
P +I L R +G L FDLGICLVLI LP +A+ VAI+ + GRR+F PP TW+AA
Sbjct 176 APSDPAASVIELSRHRGTLAFDLGICLVLIALPAMAMIVAIETVMGRRQFLPPLCTWFAA 235
Query 264 MLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYR 310
MLFAVVPLR ILPG+PP GAWID+AVV+WVLIAL +AM +YI+AWYR
Sbjct 236 MLFAVVPLRNILPGAPPPGAWIDQAVVLWVLIALVSAMGIYIIAWYR 282
>gi|169628549|ref|YP_001702198.1| hypothetical protein MAB_1458 [Mycobacterium abscessus ATCC 19977]
gi|169240516|emb|CAM61544.1| Conserved hypothetical transmembrane protein [Mycobacterium abscessus]
Length=289
Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/289 (49%), Positives = 187/289 (65%), Gaps = 5/289 (1%)
Query 26 KHMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQP-DVGTTDDTVVLIRFEE 84
K R K V ++ VL+ YV L Y L H GP D+ ++TVV+I ++
Sbjct 5 KGRFRLKPAATTVGAVVLVLVIYVGFLAIYRMLDHHSGPESADLDLSRDNETVVVIDLQD 64
Query 85 LHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTI 144
L TV NRLD +V+VLP + +D +L D SVRL + G+ +P G LPA + T+
Sbjct 65 LRTVNNRLDAEVVVLPAKTTLDA-FGLLNADMSVRLVSSLDYGERHFPRGTLPAAMDDTL 123
Query 145 EAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQT 204
A G+ +WPFD Y+T ++A+V+VG G R+ VPAR+EV GSL GW +S S
Sbjct 124 VATGDAQSWPFDEYSTGNLRAEVMVGNGVGRRPVPARIEVIGSLGGWRVST---ATSQAP 180
Query 205 SDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAM 264
+ + D I L RA+G L FD+GICLVLITLPT+AL VAI+ + GR+KF PP TW+ M
Sbjct 181 AGKGDQTTIRLVRARGTLAFDVGICLVLITLPTMALIVAIETVKGRKKFHPPLTTWFGTM 240
Query 265 LFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRESD 313
LFA+VPLR ILPG+PP GAWID+A+V+WVLIAL AMV+Y+ AW+++SD
Sbjct 241 LFAIVPLRNILPGAPPPGAWIDQALVLWVLIALVVAMVLYVEAWWKQSD 289
>gi|315444698|ref|YP_004077577.1| hypothetical protein Mspyr1_31250 [Mycobacterium sp. Spyr1]
gi|315263001|gb|ADT99742.1| hypothetical protein Mspyr1_31250 [Mycobacterium sp. Spyr1]
Length=323
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/302 (43%), Positives = 179/302 (60%), Gaps = 6/302 (1%)
Query 14 QAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIA-YVFSLLGYDWLAHTPGPLPQPDVGT 72
Q S + K + L V L V+IA YV +L+GY L P P +
Sbjct 2 QRESAPATVAKSKKPRSSRALNATVLTTLAVVIAVYVGALVGYRLLEQPPKPFEFTESSV 61
Query 73 TDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYP 132
++T V++R ++ TV N+L V VLV PD ++D +V + VRL G+L +
Sbjct 62 VEETAVILRLGKMETVENKLTVDVLVHPDRDLLDAGPEV-AANPVVRLSSWTRDGELIHM 120
Query 133 VGKLPAQVATTIE--AHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEG 190
L + A+T+E A G+P WP D Y ++T+ +V G G +R+ VPA + V G++ G
Sbjct 121 HDDLKSN-ASTVEFTAVGDPDHWPLDNYISNTIGVEVFFGDGPDRRSVPAVIVVAGAING 179
Query 191 WDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGR 250
WD+ + +G +V L+R +G D GI LVL+ LP ALFVAI+M+ R
Sbjct 180 WDVDS-DMGVLDAPWGPVPSVSFHLERTRGAHAVDFGILLVLMVLPGTALFVAIEMLLNR 238
Query 251 RKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYR 310
RKF PPF TWYAAMLFAVVPLR ILPG+PP GAWID AV++WVL+AL+AAMVVY+ AW+R
Sbjct 239 RKFLPPFITWYAAMLFAVVPLRNILPGAPPTGAWIDVAVILWVLLALSAAMVVYLAAWWR 298
Query 311 ES 312
++
Sbjct 299 QT 300
>gi|145224366|ref|YP_001135044.1| hypothetical protein Mflv_3784 [Mycobacterium gilvum PYR-GCK]
gi|145216852|gb|ABP46256.1| putative conserved transmembrane protein [Mycobacterium gilvum
PYR-GCK]
Length=324
Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 129/308 (42%), Positives = 180/308 (59%), Gaps = 12/308 (3%)
Query 7 PTGGPASQAGSDAGASPEHKHMSRRKHLVLDVCIILGVLIA-YVFSLLGYDWLAHTPGPL 65
P PA+ A S+ S + L V L V+IA YV +L+GY L P P
Sbjct 3 PESAPATDATSETPRS--------SRALNATVLTTLAVVIAVYVGALVGYRLLETPPQPF 54
Query 66 PQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENE 125
+ +T V++R ++ TV N+L + VLV PD ++ + + VRL +
Sbjct 55 EFTESSVIGETAVILRLGKMETVENKLTLDVLVHPDRDLLASGPEA-AANPVVRLSSWTQ 113
Query 126 LGDLQYPVGKLPAQVATT-IEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEV 184
GDL + L + +T + A G+P WP DTY ++T+ +V G G NR+ VPA + V
Sbjct 114 DGDLIHMHDDLKSNASTVELTAVGDPDHWPLDTYVSNTIGVEVFYGEGPNRRSVPAVIVV 173
Query 185 TGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAI 244
G++ GWD+ + +G +V L+R +G D GI LVL+ LP ALFVAI
Sbjct 174 AGAINGWDVDS-DMGVLDAPWGPVPSVSFHLERTRGAHAVDFGILLVLMVLPGTALFVAI 232
Query 245 QMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVY 304
+M+ RRKF PPF TWYAAMLFAVVPLR ILPG+PP GAWID AV++WVL+AL+AAMVV+
Sbjct 233 EMLLNRRKFLPPFITWYAAMLFAVVPLRNILPGAPPTGAWIDVAVILWVLLALSAAMVVF 292
Query 305 IVAWYRES 312
+ AW+R++
Sbjct 293 LAAWWRQT 300
>gi|254818862|ref|ZP_05223863.1| hypothetical protein MintA_02999 [Mycobacterium intracellulare
ATCC 13950]
Length=297
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/270 (38%), Positives = 144/270 (54%), Gaps = 17/270 (6%)
Query 47 AYVFSLLGY---DWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDS 103
AY+ S++ Y D + G P V + D+ I EE+ + + L V + P +
Sbjct 20 AYIVSIMMYAQGDAVRRLDGITP---VVSADEPSATINVEEIQSNYSVLAVNLAFNPGSA 76
Query 104 MIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTV 163
++D + L D S+R+ + G LP ++ + G WPFD Y + +
Sbjct 77 LLDPKTHHLKEDLSLRVRSSAMPSRHTWTKGMLPGLMSVPLTIAGQIERWPFDQYRSGLI 136
Query 164 QADVLVGAGDNRQYVPARVEVT--GSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGP 221
+ ++ G +R PA V VT L GW ++A R +D P + L+R+
Sbjct 137 EVEIFYGPDTDR--APAHVPVTFVDHLSGWQLTATR-----PQADGPYR--LQLRRSLST 187
Query 222 LVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPA 281
F + I VLIT+ +LA+FVA+Q RR FQPP TWYAAMLFAVVPLR LPGSPP
Sbjct 188 AAFAIVILGVLITIASLAVFVAVQTARDRRPFQPPMTTWYAAMLFAVVPLRNALPGSPPF 247
Query 282 GAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
G+W+D VVIWVL+AL A+MV+YI W+R
Sbjct 248 GSWVDITVVIWVLVALVASMVLYIGCWWRH 277
>gi|343924936|ref|ZP_08764472.1| hypothetical protein GOALK_029_00530 [Gordonia alkanivorans NBRC
16433]
gi|343765199|dbj|GAA11398.1| hypothetical protein GOALK_029_00530 [Gordonia alkanivorans NBRC
16433]
Length=277
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/286 (34%), Positives = 146/286 (52%), Gaps = 12/286 (4%)
Query 27 HMSRRKHLVLDVCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELH 86
+R V+ + I++G++IAYV L+ Y G V + VV + ++
Sbjct 3 ETGKRFSWVVALAIVVGLMIAYVSVLVVYAKGGTDDGAEASRPVA--NGVVVYLDINTVN 60
Query 87 TVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEA 146
+ V + ++D R L D +V + P +L +P G P + ++ +
Sbjct 61 GADFEVAGTVSIDAGGDLLDGRGD-LKQDLTVDVSPTVSDTELTFPAGTRPGVLPVSLYS 119
Query 147 HGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSD 206
G+ WPFD Y ++V G N +P V + SL GWDI A T
Sbjct 120 DGDIRLWPFDRYVAESVTVQAF---GPNDPALPTEVVLIDSLIGWDIKA------GDTVA 170
Query 207 RPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLF 266
+T RA L FDL +C +L+ LP LFV+IQ + R+ FQPP TW+A MLF
Sbjct 171 GGKAFPVTSSRAAASLAFDLALCAMLVVLPICTLFVSIQTVRHRKAFQPPMVTWFAVMLF 230
Query 267 AVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRES 312
AV+PLR I PGSPP G+W+D +VV+WVL L A++ +Y+VAW++++
Sbjct 231 AVLPLRNIFPGSPPFGSWVDYSVVLWVLGGLVASLALYVVAWWKQA 276
>gi|296168760|ref|ZP_06850451.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896562|gb|EFG76205.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=296
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/242 (38%), Positives = 130/242 (54%), Gaps = 11/242 (4%)
Query 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
T ++ + EE+ + + + V V P +++D L D +R+ + Y
Sbjct 46 TAGQSMATLTVEEMQSNYSAVVATVAVAPGPALLDPVTHRLKEDLMLRVRSAAQPSRRDY 105
Query 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNR--QYVPARVEVTGSLE 189
G LP + G+ WPFD YT+ ++ + GA + + +P R+ L
Sbjct 106 TKGMLPGVFPLPLTIAGHIERWPFDNYTSGPIEVQLFHGADTTKPPELIPVRL--IDHLP 163
Query 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
G+ +SA + + ++++RA VF + IC VLI + L LFVAIQ +
Sbjct 164 GFKVSATKFAGH-------EGYRMSVRRAPSTAVFGIVICGVLIAIAVLGLFVAIQTMRD 216
Query 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
RRKFQPP TWYAAMLFAVVPLR LPGSPP GAWID VV+WV++AL AM++YIV W+
Sbjct 217 RRKFQPPMTTWYAAMLFAVVPLRNALPGSPPIGAWIDVTVVLWVIVALVVAMLLYIVCWW 276
Query 310 RE 311
R
Sbjct 277 RH 278
>gi|118464448|ref|YP_883511.1| hypothetical protein MAV_4376 [Mycobacterium avium 104]
gi|118165735|gb|ABK66632.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=295
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/232 (38%), Positives = 124/232 (54%), Gaps = 7/232 (3%)
Query 80 IRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQ 139
I E++ + + L V + P +++D + L D S+R+ + G LP
Sbjct 53 INVEDIQSNNSVLAVNLAFNPGSALLDPKTHHLKEDLSLRVRSSAMPSRHTWTKGMLPGL 112
Query 140 VATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVG 199
+A + G WPFD Y + ++ ++ G +R V L GW ++A R
Sbjct 113 MAVPLTIAGQIERWPFDQYHSGPLEVEIFYGPDTDRDPDHVPVTFVDHLSGWQLTATR-- 170
Query 200 ESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGT 259
+D P + ++R+ F + I VLI + +LALFVAIQ RR FQPP T
Sbjct 171 ---PQADGPYR--LHVRRSMSTAAFAIVILGVLIAIASLALFVAIQTTRDRRPFQPPMTT 225
Query 260 WYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
WYAAMLFAVVPLR LPGSPP G+W+D VVIWVL+ALA +MV+YI W+R
Sbjct 226 WYAAMLFAVVPLRNALPGSPPFGSWVDITVVIWVLVALAISMVLYIGCWWRH 277
>gi|41410352|ref|NP_963188.1| hypothetical protein MAP4254 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399186|gb|AAS06804.1| hypothetical protein MAP_4254 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460739|gb|EGO39628.1| hypothetical protein MAPs_37730 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=299
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/232 (38%), Positives = 124/232 (54%), Gaps = 7/232 (3%)
Query 80 IRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQ 139
I E++ + + L V + P +++D + L D S+R+ + G LP
Sbjct 53 INVEDIQSNNSVLAVNLAFNPGSALLDPKTHHLKEDLSLRVRSSAMPSRHTWTKGMLPGL 112
Query 140 VATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVG 199
+A + G WPFD Y + ++ ++ G +R V L GW ++A R
Sbjct 113 MAVPLTIAGQIERWPFDQYHSGPLEVEIFYGPDTDRDPDHVPVTFVDHLSGWQLTATR-- 170
Query 200 ESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGT 259
+D P + ++R+ F + I VLI + +LALFVAIQ RR FQPP T
Sbjct 171 ---PQADGPYR--LHVRRSMSTAAFAIVILGVLIAIASLALFVAIQTTRDRRPFQPPMTT 225
Query 260 WYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
WYAAMLFAVVPLR LPGSPP G+W+D VVIWVL+ALA +MV+YI W+R
Sbjct 226 WYAAMLFAVVPLRNALPGSPPFGSWVDITVVIWVLVALAISMVLYIGCWWRH 277
>gi|254776806|ref|ZP_05218322.1| hypothetical protein MaviaA2_19366 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=294
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/232 (38%), Positives = 124/232 (54%), Gaps = 7/232 (3%)
Query 80 IRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQ 139
I E++ + + L V + P +++D + L D S+R+ + G LP
Sbjct 48 INVEDIQSNNSVLAVNLAFNPGSALLDPKTHHLKEDLSLRVRSSAMPSRHTWTKGMLPGL 107
Query 140 VATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVG 199
+A + G WPFD Y + ++ ++ G +R V L GW ++A R
Sbjct 108 MAVPLTIAGQIERWPFDQYHSGPLEVEIFYGPDTDRDPDHVPVTFVDHLSGWQLTATR-- 165
Query 200 ESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGT 259
+D P + ++R+ F + I VLI + +LALFVAIQ RR FQPP T
Sbjct 166 ---PQADGPYR--LHVRRSMSTAAFAIVILGVLIAIASLALFVAIQTTRDRRPFQPPMTT 220
Query 260 WYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
WYAAMLFAVVPLR LPGSPP G+W+D VVIWVL+ALA +MV+YI W+R
Sbjct 221 WYAAMLFAVVPLRNALPGSPPFGSWVDITVVIWVLVALAISMVLYIGCWWRH 272
>gi|342861891|ref|ZP_08718536.1| hypothetical protein MCOL_23495 [Mycobacterium colombiense CECT
3035]
gi|342130708|gb|EGT84012.1| hypothetical protein MCOL_23495 [Mycobacterium colombiense CECT
3035]
Length=305
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/238 (38%), Positives = 124/238 (53%), Gaps = 7/238 (2%)
Query 74 DDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPV 133
D I E++ + + L V + P +++D + L D S+R+ +
Sbjct 47 DKPSATINVEDIQSNNSVLAVNLAFNPGSALLDPKTHHLKDDLSLRVRSSAMPSRHTWTK 106
Query 134 GKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDI 193
G LP +A + G WPFD Y + ++ ++ G +R V L GW +
Sbjct 107 GMLPGLMAVPLTIAGQIERWPFDQYRSGPIEVEIFYGPDTDRAPDHVPVTFVDHLSGWRL 166
Query 194 SAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKF 253
SA R +D P + + R+ F + I VLIT+ +LAL VAIQ RR F
Sbjct 167 SATRT-----QADGPYR--LNVHRSLSTAAFAIVILGVLITIASLALVVAIQTARDRRPF 219
Query 254 QPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
QPP TWYAAMLFAVVPLR LPGSPP G+W+D VVIWVL+ALA +M++YI W+R
Sbjct 220 QPPMTTWYAAMLFAVVPLRNALPGSPPFGSWVDITVVIWVLVALAVSMILYIGCWWRH 277
>gi|226359618|ref|YP_002777396.1| hypothetical protein ROP_02040 [Rhodococcus opacus B4]
gi|226238103|dbj|BAH48451.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=289
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/246 (32%), Positives = 123/246 (50%), Gaps = 0/246 (0%)
Query 68 PDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELG 127
P G D+ VVL+ + L +R+ +V + + + L D ++ L+P
Sbjct 39 PFAGNDDEVVVLVTAKSLQPTTDRVQAEVTIAVGEEYLHANGDTLNRDITLLLFPSTSHE 98
Query 128 DLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGS 187
++ + G P T A GN WPFD + + + + GAG +R +P + V G
Sbjct 99 EIVFRAGAAPTTFDTEFIATGNAAYWPFDRFEVNPMVVEAYEGAGADRALLPTGLLVDGR 158
Query 188 LEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMI 247
++GW A V + S + R G L++ + L++ L LA FVA+Q
Sbjct 159 VDGWKARADAVAVDTDLSRNGTGAALLFARTGGNLIYAGILLLMMTILAGLAAFVALQTF 218
Query 248 TGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVA 307
+R W AAMLFAVVPLR ILPGSPP G+W+D A+ +WV+ L A++ +++
Sbjct 219 RRKRAVNTDMLGWMAAMLFAVVPLRGILPGSPPIGSWVDIALTVWVVSTLVASLALFVFC 278
Query 308 WYRESD 313
W+R+S+
Sbjct 279 WWRDSE 284
>gi|312140169|ref|YP_004007505.1| integral membrane protein [Rhodococcus equi 103S]
gi|311889508|emb|CBH48825.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=393
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/241 (34%), Positives = 124/241 (52%), Gaps = 7/241 (2%)
Query 74 DDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPV 133
D+ +V++ E+ +R+DV+V V P S +D L + +V + P L P
Sbjct 51 DEVLVIVSLIEVRPSTSRVDVEVSVAPGASFLDSGGADLAREMTVLVSPSIARTKLVLPQ 110
Query 134 GKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDI 193
G T + G G WPFD + D + G+G + Q P RV V G EGW
Sbjct 111 GTSVTTFDTQVLLDGQAGRWPFDRFVVDPLVVTAYTGSGSDVQTHPTRVLVDGEAEGWT- 169
Query 194 SAVRVGESSQTSDRPD--NVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRR 251
VG+ ++D D V + + R+ G LV+ + +++ L LA FV+IQ RR
Sbjct 170 ----VGDDVLSADGQDVQEVRVEVHRSGGILVYSALLLAMMVILAALAAFVSIQTARRRR 225
Query 252 KFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
W AAM+FAV+P+R ILPG+PP GAW+D V +WV++ L ++ +Y+ W+R+
Sbjct 226 VVHTDMLGWMAAMVFAVIPMRNILPGAPPIGAWVDITVTVWVIVTLVVSLALYVYCWWRD 285
Query 312 S 312
+
Sbjct 286 T 286
>gi|183981135|ref|YP_001849426.1| hypothetical protein MMAR_1115 [Mycobacterium marinum M]
gi|183174461|gb|ACC39571.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=280
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/267 (38%), Positives = 133/267 (50%), Gaps = 7/267 (2%)
Query 45 LIAYVFSLLGYDWLAHTPGPLPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSM 104
++AYV S L Y P L Q T D T V I EE+ + L + V P +
Sbjct 12 VVAYVGSTLLYGNAGKGPHDLTQ-GRPTADGTTVTISLEEVQSSNTVLSANLAVTPGPGL 70
Query 105 IDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQ 164
+D R + L+ D SV + + G LP + GN WPFD Y + +
Sbjct 71 LDPRTEGLSDDLSVVVTSSVTPTKRTWSKGMLPGVFPVPLAITGNVADWPFDHYRSGPIT 130
Query 165 ADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVF 224
++ GA Q A+V SL GW I G+ + + + L+R+ F
Sbjct 131 VELFSGAAKVPQR--AKVRFVDSLAGWQIDIPTAGDGTGVTP----YRLALQRSPSTAAF 184
Query 225 DLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAW 284
L I VL+T+ LALFVA+Q RR FQPP TWYAAMLFAVVPLR LP +PP GAW
Sbjct 185 ALLIIGVLVTIAGLALFVAVQTARDRRPFQPPMTTWYAAMLFAVVPLRNALPNAPPFGAW 244
Query 285 IDRAVVIWVLIALAAAMVVYIVAWYRE 311
ID VV+WV++ L +M +YI W+R
Sbjct 245 IDVRVVVWVIVVLVISMAIYISCWWRH 271
>gi|111017104|ref|YP_700076.1| hypothetical protein RHA1_ro00082 [Rhodococcus jostii RHA1]
gi|110816634|gb|ABG91918.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=303
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/241 (31%), Positives = 120/241 (50%), Gaps = 0/241 (0%)
Query 73 TDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYP 132
+D+ VVL+ + L +R+ +V + + + L D ++ L P ++ +
Sbjct 47 SDEVVVLVTAKSLQPTTDRVQAEVTIAVGEDFLHANGDTLNRDITLLLVPSTSHEEIVFR 106
Query 133 VGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWD 192
G T A GN WPFD + + + + G G +R+ VP + + G ++GW
Sbjct 107 AGASATTFDTEFIATGNAAYWPFDRFEVNPMVVEAYQGLGADRELVPTALLLEGRVDGWK 166
Query 193 ISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRK 252
A V + S + R G L++ + L++ L LA FVA+Q +R
Sbjct 167 ARAEEVAVDTDLSRNGTGAALMFARTGGNLIYAGILLLMMTILAGLAAFVALQTFRRKRA 226
Query 253 FQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRES 312
W AAMLFAVVPLR ILPGSPP G+W+D A+ +WV+ L A++ +++ W+R+S
Sbjct 227 VNTDMLGWMAAMLFAVVPLRGILPGSPPIGSWVDIALTVWVVSTLVASLALFVFCWWRDS 286
Query 313 D 313
+
Sbjct 287 E 287
>gi|289555707|ref|ZP_06444917.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|289440339|gb|EFD22832.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
Length=305
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 126/240 (53%), Gaps = 10/240 (4%)
Query 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 63 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 122
Query 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 123 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 178
Query 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
GW++ VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 179 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 234
Query 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 235 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 294
>gi|15610571|ref|NP_217952.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|31794612|ref|NP_857105.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121639356|ref|YP_979580.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
28 more sequence titles
Length=284
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 126/240 (53%), Gaps = 10/240 (4%)
Query 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
Query 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 157
Query 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
GW++ VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 213
Query 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
>gi|148824645|ref|YP_001289399.1| transmembrane protein [Mycobacterium tuberculosis F11]
gi|167966893|ref|ZP_02549170.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra]
gi|253800480|ref|YP_003033481.1| hypothetical protein TBMG_03483 [Mycobacterium tuberculosis KZN
1435]
36 more sequence titles
Length=312
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 126/240 (53%), Gaps = 10/240 (4%)
Query 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 70 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 129
Query 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 130 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 185
Query 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
GW++ VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 186 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 241
Query 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 242 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 301
>gi|339296259|gb|AEJ48370.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339299862|gb|AEJ51972.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5180]
Length=271
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 126/240 (53%), Gaps = 10/240 (4%)
Query 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 29 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 88
Query 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 89 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 144
Query 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
GW++ VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 145 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 200
Query 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 201 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 260
>gi|340628406|ref|YP_004746858.1| hypothetical protein MCAN_34521 [Mycobacterium canettii CIPT
140010059]
gi|340006596|emb|CCC45783.1| putative conserved transmembrane protein [Mycobacterium canettii
CIPT 140010059]
Length=284
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 126/240 (53%), Gaps = 10/240 (4%)
Query 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
Query 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 157
Query 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
GW++ VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSTVAFGTVIVGVLIALAGVGLFVAVQTARG 213
Query 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
>gi|296168761|ref|ZP_06850452.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896563|gb|EFG76206.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=283
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/277 (35%), Positives = 143/277 (52%), Gaps = 20/277 (7%)
Query 38 VCIILGVLIAYVFSLLGYDWLAHTPGPLPQPDVGTTDD-TVVLIRFEELHTVANRLDVKV 96
+ +I+G++ AYV S+ Y A + G QP+ D + + E++ + + L +
Sbjct 6 IALIVGIVGAYVASVAIY---ASSGGRHHQPETAAGGDRSTATLAIEDIQSNYSVLMGNL 62
Query 97 LVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQYPVGKLPAQVATTIEAHGNPGAWPFD 156
+ P +++D Q D S+R+ + G LP + G+ +WPFD
Sbjct 63 SISPGSALLDPETQHFKEDVSLRVRSVATPTRRTWTKGMLPGVFPVPLTIAGDIESWPFD 122
Query 157 TYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLEGWDISAVRVGESSQTSDRPDNVIIT 214
Y + V+ +++ G G+ VP RV VT L GW +S G +
Sbjct 123 HYRSGPVEVELMHGPGE----VPERVPVTFVNHLSGWQVSTAGSGPYRAS---------- 168
Query 215 LKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLFAVVPLRTI 274
+ R+ F + I VL+ + L LFVA+Q + RRKFQPP TWYAAMLFAVVPLR
Sbjct 169 VHRSLSAAAFGIVILCVLVAIAGLGLFVAVQTVRNRRKFQPPMTTWYAAMLFAVVPLRNA 228
Query 275 LPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
LPGSPP G WID +V+WVL+ L +M++YI+ W+R
Sbjct 229 LPGSPPFGGWIDITLVLWVLVVLVVSMLLYIMCWWRH 265
>gi|15843030|ref|NP_338067.1| hypothetical protein MT3541 [Mycobacterium tuberculosis CDC1551]
gi|254366039|ref|ZP_04982084.1| conserved transmembrane protein [Mycobacterium tuberculosis str.
Haarlem]
gi|13883372|gb|AAK47881.1| hypothetical protein MT3541 [Mycobacterium tuberculosis CDC1551]
gi|134151552|gb|EBA43597.1| conserved transmembrane protein [Mycobacterium tuberculosis str.
Haarlem]
gi|323717919|gb|EGB27108.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
Length=312
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/240 (38%), Positives = 125/240 (53%), Gaps = 10/240 (4%)
Query 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 70 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 129
Query 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 130 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 185
Query 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
GW++ VG++ + P + L R+ + F I VLI L + LFV +Q G
Sbjct 186 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVVVQTARG 241
Query 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 242 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 301
>gi|323359228|ref|YP_004225624.1| hypothetical protein MTES_2780 [Microbacterium testaceum StLB037]
gi|323275599|dbj|BAJ75744.1| hypothetical protein MTES_2780 [Microbacterium testaceum StLB037]
Length=273
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/232 (31%), Positives = 111/232 (48%), Gaps = 9/232 (3%)
Query 83 EELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGD--LQYPVGKLPAQV 140
E++ +RL V +L P + +T D + G + Y +L A
Sbjct 45 EKMDAATSRLTVSLL--PKQADGGEYTNGVTIDKPFAVLVSAVAGSTAVHYQPSELVAPT 102
Query 141 ATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTG-SLEGWDISAVRVG 199
+ G WPFD Y + + A +P V V+G + GWDI+
Sbjct 103 EVSFVMDGAIEQWPFDRYHVTSFVVAAVDDADGESVPLPTAVTVSGRGVTGWDITMAE-- 160
Query 200 ESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGT 259
D V I+ R+ + F + + +++ +PTL L VAI ++ GRRK +
Sbjct 161 --RDAGDGLLAVDISASRSGATVAFGIVLLTLMVIIPTLVLIVAIAVLRGRRKVEVTTLG 218
Query 260 WYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
W AM+FA +PLR LPGSPP G+WID +V+WV+ AL A +V++++AW+R
Sbjct 219 WMGAMVFATIPLRNFLPGSPPIGSWIDYLIVLWVIAALVAGLVIFVIAWWRR 270
>gi|254234031|ref|ZP_04927356.1| hypothetical protein TBCG_03374 [Mycobacterium tuberculosis C]
gi|124599560|gb|EAY58664.1| hypothetical protein TBCG_03374 [Mycobacterium tuberculosis C]
Length=313
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/243 (35%), Positives = 120/243 (50%), Gaps = 15/243 (6%)
Query 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGD--- 128
T D T V + E+L T+ L + V P ++D + Q L D +V +
Sbjct 70 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKEDLTVTVTSVVTPTKRTL 129
Query 129 LQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--G 186
L+ + ++ A + G +T TV+ + P RV VT
Sbjct 130 LECFAARRLSRPADHLRGSSRIGR------STTTVRRRSRSQLYRGAAHAPERVSVTFVD 183
Query 187 SLEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQM 246
L GW++ VG++ + P + L R+ + F I VLI L + LFV +Q
Sbjct 184 RLPGWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVVVQT 239
Query 247 ITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIV 306
GRR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+
Sbjct 240 ARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYIL 299
Query 307 AWY 309
W+
Sbjct 300 CWW 302
>gi|2344842|emb|CAB11444.1| hypothetical protein [Mycobacterium leprae]
Length=95
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/91 (52%), Positives = 61/91 (68%), Gaps = 2/91 (2%)
Query 188 LEGWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMI 247
+ GW + R S+ S+ D+VI+TL+RAKG L+FDLGICLVL++LPTL L + I M
Sbjct 1 MYGWAVYTER--RVSEASNDSDDVIVTLQRAKGSLLFDLGICLVLVSLPTLVLVMPILMA 58
Query 248 TGRRKFQPPFGTWYAAMLFAVVPLRTILPGS 278
GR+ F P F TWY + FA+VPL PGS
Sbjct 59 LGRKNFFPQFATWYTVVPFAIVPLNNFFPGS 89
>gi|258652429|ref|YP_003201585.1| hypothetical protein Namu_2219 [Nakamurella multipartita DSM
44233]
gi|258555654|gb|ACV78596.1| hypothetical protein Namu_2219 [Nakamurella multipartita DSM
44233]
Length=309
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/248 (34%), Positives = 130/248 (53%), Gaps = 13/248 (5%)
Query 65 LPQPDVGTTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPEN 124
+P+PD G V++ + A + V V + PD S++ + +V + P
Sbjct 69 VPRPDGGV----AVILTARTITAAAGTMRVDVAIDPDPSLLGSD-GYPSRPITVAVDPTE 123
Query 125 ELGDLQYPVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEV 184
E DL + + P T+ G+ WPFD YT ++ A V VG G + V + +E+
Sbjct 124 EDADLVFEADRRPQARQLTVLFDGDIQDWPFDRYTG-SLTATVTVGQGADAVLVDSVIEL 182
Query 185 TGSLEGWDISAVRVGESSQTSDRPDNVI-ITLKRAKGPLVFDLGICLVLITLPTLALFVA 243
GS++GWD++ S PD ++ ++ R+ ++F L + LVLI LP V
Sbjct 183 DGSVQGWDLA------ESADPQAPDLLVDVSFHRSSAIMLFGLTLVLVLILLPVACWIVQ 236
Query 244 IQMITGRRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVV 303
+++ RR F+ W AA+LFA +P+R PGSPP G+W+D VV+WV++ALAAA+ V
Sbjct 237 VRLYRDRRLFEAGMLGWTAALLFATIPIRNFFPGSPPPGSWVDVLVVLWVVVALAAALFV 296
Query 304 YIVAWYRE 311
+ AW R
Sbjct 297 GVAAWIRS 304
>gi|217977911|ref|YP_002362058.1| hypothetical protein Msil_1750 [Methylocella silvestris BL2]
gi|217503287|gb|ACK50696.1| hypothetical protein Msil_1750 [Methylocella silvestris BL2]
Length=284
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/172 (30%), Positives = 79/172 (46%), Gaps = 11/172 (6%)
Query 144 IEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVTGSLEGWDISAVRVGESSQ 203
I +G+ A+PFD Y + A G + +P R+ + L GW+I +
Sbjct 116 IGVNGSISAYPFDEYRGEVTIA-AWEGKKPEGERIPIRLTLWERLAGWEIDIL------A 168
Query 204 TSDRPDNVIITLK-RAKGPLV---FDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGT 259
+ P V + L+ RAK PL F + V+ + L + + I G R+ +
Sbjct 169 RAPAPGEVGLGLEIRAKRPLAQIYFASLVYAVMAVIALCGLTIGVLAIAGLRRLEAALTG 228
Query 260 WYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRE 311
AAMLFAV LR ++PG+PP G D V + +AL + +I+AW R
Sbjct 229 ALAAMLFAVPALRNVMPGAPPLGVKADAFVFLSAQMALMIGLAFFIIAWARR 280
>gi|163841914|ref|YP_001626319.1| hypothetical protein RSal33209_3188 [Renibacterium salmoninarum
ATCC 33209]
gi|162955390|gb|ABY24905.1| hypothetical protein RSal33209_3188 [Renibacterium salmoninarum
ATCC 33209]
Length=68
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/45 (58%), Positives = 36/45 (80%), Gaps = 0/45 (0%)
Query 264 MLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAW 308
MLFAV+P+R LPG+PP G+WI+ V +WV+I L AA+++YI AW
Sbjct 1 MLFAVIPIRNFLPGNPPPGSWINLTVTVWVVIGLTAALMIYIRAW 45
>gi|217976399|ref|YP_002360546.1| hypothetical protein Msil_0203 [Methylocella silvestris BL2]
gi|217501775|gb|ACK49184.1| hypothetical protein Msil_0203 [Methylocella silvestris BL2]
Length=295
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/178 (31%), Positives = 83/178 (47%), Gaps = 14/178 (7%)
Query 143 TIEAHGNPGA---WPFDTYTTDTVQADVLVGAG---DNRQYVPARVEVTGSLEGWDISAV 196
TI A N G+ +PFD Y D ++ L GA ++ Q + V V L G+ I +
Sbjct 121 TIGADLNQGSIARYPFDRYVID-LRVQALEGAEATPEHEQAIALDVTVWEGLLGYQIRSS 179
Query 197 RV--GESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQ 254
G++ R D L+RA + F L +I L +L ++ + G RK +
Sbjct 180 MAPGGDAGDLRLRFD-----LRRADAHVFFALATYGAMIVLACSSLLISFLVFLGYRKPE 234
Query 255 PPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWYRES 312
AA++FA+ LR LP +PP G W D V +W +A + +++VAW RE
Sbjct 235 AAPLGALAALVFALPALRNALPLAPPLGVWADVLVFLWAELAAVLGLALFVVAWAREK 292
>gi|328766375|gb|EGF76430.1| hypothetical protein BATDEDRAFT_92727 [Batrachochytrium dendrobatidis
JAM81]
Length=399
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/169 (28%), Positives = 74/169 (44%), Gaps = 9/169 (5%)
Query 148 GNPGAWPFDTYTTDTVQADVLVGAGDNRQY-VPARVEVTGSLEGWDISAVRVGESSQTSD 206
GN +PFDTY V + V + Q +P + S W A + S T
Sbjct 140 GNINRYPFDTYNISYVVSASFVNSTTGVQTPIPIYLATMASTNSWQADASFNSDVSPTLK 199
Query 207 RPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITGRRKFQPPFGTWYAAMLF 266
V+ T R+ F L + ++ L A +A + RK +PP A++LF
Sbjct 200 ----VLATFYRSWTSRFFSLLVFTIMWILSITAFILAATLWFRNRKVEPPTIAVIASLLF 255
Query 267 AVVPLRTILPGSPPAGAWIDRAVVIWVL----IALAAAMVVYIVAWYRE 311
++ +R+ PGSPP G +D A W + +++ M+ Y+V + RE
Sbjct 256 SLPAIRSSQPGSPPVGCTLDIAGYFWNIGLAALSMFLLMLNYVVRYKRE 304
Lambda K H
0.321 0.138 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 539914028364
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40