BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0720
Length=122
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607860|ref|NP_215234.1| 50S ribosomal protein L18 [Mycobact... 239 9e-62
gi|240167725|ref|ZP_04746384.1| 50S ribosomal protein L18 [Mycob... 219 9e-56
gi|183981073|ref|YP_001849364.1| 50S ribosomal protein L18, RplR... 216 9e-55
gi|296168579|ref|ZP_06850383.1| 50S ribosomal protein L18 [Mycob... 214 3e-54
gi|118463503|ref|YP_883584.1| 50S ribosomal protein L18 [Mycobac... 213 5e-54
gi|3122693|sp|O32999.1|RL18_MYCLE RecName: Full=50S ribosomal pr... 213 9e-54
gi|118616589|ref|YP_904921.1| 50S ribosomal protein L18, RplR [M... 213 1e-53
gi|254818379|ref|ZP_05223380.1| 50S ribosomal protein L18 [Mycob... 212 1e-53
gi|41410281|ref|NP_963117.1| 50S ribosomal protein L18 [Mycobact... 212 2e-53
gi|342861814|ref|ZP_08718459.1| 50S ribosomal protein L18 [Mycob... 212 2e-53
gi|15827986|ref|NP_302249.1| 50S ribosomal protein L18 [Mycobact... 210 6e-53
gi|169630876|ref|YP_001704525.1| 50S ribosomal protein L18 [Myco... 201 2e-50
gi|333991956|ref|YP_004524570.1| 50S ribosomal protein L18 RplR ... 197 5e-49
gi|120402349|ref|YP_952178.1| 50S ribosomal protein L18 [Mycobac... 194 4e-48
gi|145225607|ref|YP_001136285.1| 50S ribosomal protein L18 [Myco... 192 2e-47
gi|312140902|ref|YP_004008238.1| 50S ribosomal protein l18 rplr ... 183 7e-45
gi|108798004|ref|YP_638201.1| 50S ribosomal protein L18 [Mycobac... 178 2e-43
gi|226365611|ref|YP_002783394.1| 50S ribosomal protein L18 [Rhod... 172 1e-41
gi|111023112|ref|YP_706084.1| 50S ribosomal protein L18 [Rhodoco... 171 2e-41
gi|333918163|ref|YP_004491744.1| 50S ribosomal protein L18 [Amyc... 171 3e-41
gi|319948707|ref|ZP_08022828.1| 50S ribosomal protein L18 [Dietz... 170 6e-41
gi|226305358|ref|YP_002765316.1| 50S ribosomal protein L18 [Rhod... 169 9e-41
gi|54022757|ref|YP_116999.1| 50S ribosomal protein L18 [Nocardia... 167 3e-40
gi|262203559|ref|YP_003274767.1| 50S ribosomal protein L18 [Gord... 162 1e-38
gi|331699160|ref|YP_004335399.1| 50S ribosomal protein L18 [Pseu... 161 2e-38
gi|118471867|ref|YP_885853.1| 50S ribosomal protein L18 [Mycobac... 161 3e-38
gi|340795293|ref|YP_004760756.1| 50S ribosomal protein L18 [Cory... 161 4e-38
gi|227487090|ref|ZP_03917406.1| 50S ribosomal protein L18 [Coryn... 160 8e-38
gi|296141081|ref|YP_003648324.1| 50S ribosomal protein L18 [Tsuk... 159 1e-37
gi|237786353|ref|YP_002907058.1| 50S ribosomal protein L18 [Cory... 158 2e-37
gi|343927717|ref|ZP_08767185.1| 50S ribosomal protein L18 [Gordo... 158 3e-37
gi|336326408|ref|YP_004606374.1| 50S ribosomal protein L18 [Cory... 158 3e-37
gi|300779809|ref|ZP_07089665.1| 50S ribosomal protein L18 [Coryn... 156 8e-37
gi|38233135|ref|NP_938902.1| 50S ribosomal protein L18 [Coryneba... 155 1e-36
gi|300857787|ref|YP_003782770.1| 50S ribosomal protein L18 [Cory... 155 1e-36
gi|227832260|ref|YP_002833967.1| 50S ribosomal protein L18 [Cory... 155 2e-36
gi|337290038|ref|YP_004629059.1| 50S ribosomal protein L18 [Cory... 154 3e-36
gi|73621585|sp|Q6NJ86.2|RL18_CORDI RecName: Full=50S ribosomal p... 154 4e-36
gi|117927531|ref|YP_872082.1| 50S ribosomal protein L18P [Acidot... 153 6e-36
gi|334564592|ref|ZP_08517583.1| 50S ribosomal protein L18 [Coryn... 153 9e-36
gi|260579241|ref|ZP_05847127.1| 50S ribosomal protein L18 [Coryn... 152 1e-35
gi|326383214|ref|ZP_08204902.1| 50S ribosomal protein L18 [Gordo... 152 1e-35
gi|68536885|ref|YP_251590.1| 50S ribosomal protein L18 [Coryneba... 152 2e-35
gi|25027107|ref|NP_737161.1| 50S ribosomal protein L18 [Coryneba... 151 3e-35
gi|19551776|ref|NP_599778.1| 50S ribosomal protein L18 [Coryneba... 150 6e-35
gi|284992858|ref|YP_003411412.1| 50S ribosomal protein L18 [Geod... 150 7e-35
gi|255324764|ref|ZP_05365878.1| ribosomal protein L18 [Corynebac... 150 7e-35
gi|256380582|ref|YP_003104242.1| 50S ribosomal protein L18 [Acti... 150 9e-35
gi|288917246|ref|ZP_06411615.1| ribosomal protein L18 [Frankia s... 149 2e-34
gi|172040030|ref|YP_001799744.1| 50S ribosomal protein L18 [Cory... 149 2e-34
>gi|15607860|ref|NP_215234.1| 50S ribosomal protein L18 [Mycobacterium tuberculosis H37Rv]
gi|15840128|ref|NP_335165.1| 50S ribosomal protein L18 [Mycobacterium tuberculosis CDC1551]
gi|31791906|ref|NP_854399.1| 50S ribosomal protein L18 [Mycobacterium bovis AF2122/97]
85 more sequence titles
Length=122
Score = 239 bits (610), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS
Sbjct 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL
Sbjct 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
Query 121 SF 122
SF
Sbjct 121 SF 122
>gi|240167725|ref|ZP_04746384.1| 50S ribosomal protein L18 [Mycobacterium kansasii ATCC 12478]
Length=135
Score = 219 bits (559), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/122 (90%), Positives = 118/122 (97%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ QSVSATRR+SRLRRH RLRKK++GT +RPRLVVHRSARHIHVQLVNDLNGTT+AAASS
Sbjct 14 VGQSVSATRRVSRLRRHARLRKKIAGTPQRPRLVVHRSARHIHVQLVNDLNGTTLAAASS 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVRG+ GDKKARSVRVGQLIAERAKAAGIDTVVFDRGGY+YGGRIAALADAARENGL
Sbjct 74 IEADVRGLDGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYSYGGRIAALADAARENGL 133
Query 121 SF 122
+F
Sbjct 134 NF 135
>gi|183981073|ref|YP_001849364.1| 50S ribosomal protein L18, RplR [Mycobacterium marinum M]
gi|226723352|sp|B2HCT7.1|RL18_MYCMM RecName: Full=50S ribosomal protein L18
gi|183174399|gb|ACC39509.1| 50S ribosomal protein L18, RplR [Mycobacterium marinum M]
Length=135
Score = 216 bits (550), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 108/122 (89%), Positives = 115/122 (95%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ QSVSATRR+SRLRRH RLRK+++GT +RPRLVVHRSARHIHVQLVND NGTTVAAASS
Sbjct 14 VGQSVSATRRVSRLRRHARLRKRIAGTQQRPRLVVHRSARHIHVQLVNDANGTTVAAASS 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE DVRG+ GDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL
Sbjct 74 IETDVRGLDGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 133
Query 121 SF 122
F
Sbjct 134 KF 135
>gi|296168579|ref|ZP_06850383.1| 50S ribosomal protein L18 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896642|gb|EFG76281.1| 50S ribosomal protein L18 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=135
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/122 (89%), Positives = 114/122 (94%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ QSVSATRR+SRLRRH RLRKK++GT ERPRLVV+RS RHIHVQLVND NGTTVAAASS
Sbjct 14 VGQSVSATRRVSRLRRHARLRKKIAGTPERPRLVVNRSTRHIHVQLVNDENGTTVAAASS 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE DVRG+ GDKKARSVRVGQLIAERAKAAGIDT VFDRGGYTYGGRIAALADAARENGL
Sbjct 74 IEDDVRGMQGDKKARSVRVGQLIAERAKAAGIDTAVFDRGGYTYGGRIAALADAARENGL 133
Query 121 SF 122
SF
Sbjct 134 SF 135
>gi|118463503|ref|YP_883584.1| 50S ribosomal protein L18 [Mycobacterium avium 104]
gi|166218572|sp|A0QKZ6.1|RL18_MYCA1 RecName: Full=50S ribosomal protein L18
gi|118164790|gb|ABK65687.1| ribosomal protein L18 [Mycobacterium avium 104]
Length=122
Score = 213 bits (543), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/122 (89%), Positives = 114/122 (94%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
M QSVSATRR+SRLRRH RLRKK++GT ERPRLVV+RSARHIHVQLVND NGTTVAAASS
Sbjct 1 MGQSVSATRRVSRLRRHARLRKKIAGTPERPRLVVNRSARHIHVQLVNDENGTTVAAASS 60
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE DVR + GDKKARSVRVGQLIAERAKAAGID+VVFDRGGYTYGGRIAALADAARENGL
Sbjct 61 IEDDVRSLQGDKKARSVRVGQLIAERAKAAGIDSVVFDRGGYTYGGRIAALADAARENGL 120
Query 121 SF 122
F
Sbjct 121 QF 122
>gi|3122693|sp|O32999.1|RL18_MYCLE RecName: Full=50S ribosomal protein L18
gi|2344850|emb|CAB11452.1| ribosomal protein L18 [Mycobacterium leprae]
Length=122
Score = 213 bits (541), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/122 (87%), Positives = 115/122 (95%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
M QSVSA RR+SRLRRH RLRKK+SGT+ERPRLVV+RSARHIHVQLVND+ GTTVAAASS
Sbjct 1 MVQSVSAIRRVSRLRRHARLRKKVSGTSERPRLVVNRSARHIHVQLVNDVTGTTVAAASS 60
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVRG+ GDKK RSVRVGQLIAERAKAAGI+TVVFDRGGYTYGGRIAALAD+ RENGL
Sbjct 61 IEADVRGLQGDKKVRSVRVGQLIAERAKAAGINTVVFDRGGYTYGGRIAALADSVRENGL 120
Query 121 SF 122
+F
Sbjct 121 NF 122
>gi|118616589|ref|YP_904921.1| 50S ribosomal protein L18, RplR [Mycobacterium ulcerans Agy99]
gi|166218575|sp|A0PM81.1|RL18_MYCUA RecName: Full=50S ribosomal protein L18
gi|118568699|gb|ABL03450.1| 50S ribosomal protein L18, RplR [Mycobacterium ulcerans Agy99]
Length=122
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/122 (88%), Positives = 113/122 (93%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
M QSVSA RR+SRLRRH RLRK+++GT +RPRLVVHRSARHIHVQLVND NGTTVAAASS
Sbjct 1 MGQSVSAIRRVSRLRRHARLRKRIAGTQQRPRLVVHRSARHIHVQLVNDANGTTVAAASS 60
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE DVRG+ GDKKARSVRVGQLIAERAKAA IDTVVFDRGGYTYGGRIAALADAARENGL
Sbjct 61 IETDVRGLDGDKKARSVRVGQLIAERAKAADIDTVVFDRGGYTYGGRIAALADAARENGL 120
Query 121 SF 122
F
Sbjct 121 KF 122
>gi|254818379|ref|ZP_05223380.1| 50S ribosomal protein L18 [Mycobacterium intracellulare ATCC
13950]
Length=122
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/122 (88%), Positives = 113/122 (93%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
M QSVSATRR+SRLRRH RLRKK+ GT +RPRLVV+RSARHIHVQLVND NGTTVAAASS
Sbjct 1 MGQSVSATRRVSRLRRHARLRKKIEGTPQRPRLVVNRSARHIHVQLVNDENGTTVAAASS 60
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE DVR + GDKKARSVRVGQLIAERAKAAGID+VVFDRGGYTYGGRIAALADAARENGL
Sbjct 61 IEDDVRSLQGDKKARSVRVGQLIAERAKAAGIDSVVFDRGGYTYGGRIAALADAARENGL 120
Query 121 SF 122
F
Sbjct 121 QF 122
>gi|41410281|ref|NP_963117.1| 50S ribosomal protein L18 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254776885|ref|ZP_05218401.1| 50S ribosomal protein L18 [Mycobacterium avium subsp. avium ATCC
25291]
gi|73621624|sp|Q73S93.1|RL18_MYCPA RecName: Full=50S ribosomal protein L18
gi|41399115|gb|AAS06733.1| RplR [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460646|gb|EGO39537.1| ribosomal protein L18, bacterial type [Mycobacterium avium subsp.
paratuberculosis S397]
Length=135
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/122 (88%), Positives = 114/122 (94%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ QSVSATRR+SRLRRH RLRKK++GT ERPRLVV+RSARHIHVQLVND NGTTVAAASS
Sbjct 14 VGQSVSATRRVSRLRRHARLRKKIAGTPERPRLVVNRSARHIHVQLVNDENGTTVAAASS 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE DVR + GDKKARSVRVGQLIAERAKAAGID+VVFDRGGYTYGGRIAALADAARENGL
Sbjct 74 IEDDVRSLQGDKKARSVRVGQLIAERAKAAGIDSVVFDRGGYTYGGRIAALADAARENGL 133
Query 121 SF 122
F
Sbjct 134 QF 135
>gi|342861814|ref|ZP_08718459.1| 50S ribosomal protein L18 [Mycobacterium colombiense CECT 3035]
gi|342130631|gb|EGT83935.1| 50S ribosomal protein L18 [Mycobacterium colombiense CECT 3035]
Length=122
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/122 (87%), Positives = 114/122 (94%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
M QSVSATRR+SRLRRH RLRKK++GT +RPRLV++RSARHIHVQLVND NGTTVAAASS
Sbjct 1 MGQSVSATRRVSRLRRHARLRKKIAGTPQRPRLVINRSARHIHVQLVNDENGTTVAAASS 60
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE DVR + GDKKARSVRVGQLIAERAKAAGID+VVFDRGGYTYGGRIAALADAARENGL
Sbjct 61 IEDDVRSLQGDKKARSVRVGQLIAERAKAAGIDSVVFDRGGYTYGGRIAALADAARENGL 120
Query 121 SF 122
F
Sbjct 121 QF 122
>gi|15827986|ref|NP_302249.1| 50S ribosomal protein L18 [Mycobacterium leprae TN]
gi|221230463|ref|YP_002503879.1| 50S ribosomal protein L18 [Mycobacterium leprae Br4923]
gi|13093539|emb|CAC30797.1| 50S ribosomal protein L18 [Mycobacterium leprae]
gi|219933570|emb|CAR71939.1| 50S ribosomal protein L18 [Mycobacterium leprae Br4923]
Length=121
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/120 (88%), Positives = 114/120 (95%), Gaps = 0/120 (0%)
Query 3 QSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIE 62
QSVSA RR+SRLRRH RLRKK+SGT+ERPRLVV+RSARHIHVQLVND+ GTTVAAASSIE
Sbjct 2 QSVSAIRRVSRLRRHARLRKKVSGTSERPRLVVNRSARHIHVQLVNDVTGTTVAAASSIE 61
Query 63 ADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
ADVRG+ GDKK RSVRVGQLIAERAKAAGI+TVVFDRGGYTYGGRIAALAD+ RENGL+F
Sbjct 62 ADVRGLQGDKKVRSVRVGQLIAERAKAAGINTVVFDRGGYTYGGRIAALADSVRENGLNF 121
>gi|169630876|ref|YP_001704525.1| 50S ribosomal protein L18 [Mycobacterium abscessus ATCC 19977]
gi|169242843|emb|CAM63871.1| 50S ribosomal protein L18 [Mycobacterium abscessus]
Length=137
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/122 (82%), Positives = 112/122 (92%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ +++S TRR++R+RRH RLRKK+SGT RPRLVV+RSARHIHVQLVNDL GTT+AAASS
Sbjct 16 VGKNISETRRVARIRRHARLRKKVSGTDARPRLVVNRSARHIHVQLVNDLTGTTLAAASS 75
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADV+ V GDKKARS RVGQLIAERAKAAG+DTVVFDRGGYTYGGRIAALADAARENGL
Sbjct 76 IEADVQAVDGDKKARSARVGQLIAERAKAAGVDTVVFDRGGYTYGGRIAALADAARENGL 135
Query 121 SF 122
F
Sbjct 136 VF 137
>gi|333991956|ref|YP_004524570.1| 50S ribosomal protein L18 RplR [Mycobacterium sp. JDM601]
gi|333487924|gb|AEF37316.1| 50S ribosomal protein L18 RplR [Mycobacterium sp. JDM601]
Length=135
Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/122 (82%), Positives = 108/122 (89%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ QSVS RR R+RRH RLRKK++GT ERPRLVVHRS+RHIHVQLV+DL G T+AAASS
Sbjct 14 IGQSVSEARRTHRVRRHARLRKKIAGTPERPRLVVHRSSRHIHVQLVDDLAGHTLAAASS 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVRGV GDKKA SVRVGQLIAERAKAAG+ TVVFDRGGYTYGGRIAALADAARE GL
Sbjct 74 IEADVRGVDGDKKAHSVRVGQLIAERAKAAGVQTVVFDRGGYTYGGRIAALADAAREGGL 133
Query 121 SF 122
F
Sbjct 134 KF 135
>gi|120402349|ref|YP_952178.1| 50S ribosomal protein L18 [Mycobacterium vanbaalenii PYR-1]
gi|119955167|gb|ABM12172.1| LSU ribosomal protein L18P [Mycobacterium vanbaalenii PYR-1]
Length=137
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/122 (82%), Positives = 108/122 (89%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ +++S TRR SRLRRH RLRKK+SGTA+RPRLVV+RSARHIHVQLV+DL G T+AAASS
Sbjct 16 VGKNISETRRTSRLRRHARLRKKVSGTADRPRLVVNRSARHIHVQLVDDLEGVTLAAASS 75
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVR GDKKA S RVGQLIAERAKAAGID VVFDRGGYTYGGRIAALADAARE GL
Sbjct 76 IEADVRAHEGDKKAASTRVGQLIAERAKAAGIDEVVFDRGGYTYGGRIAALADAAREGGL 135
Query 121 SF 122
F
Sbjct 136 KF 137
>gi|145225607|ref|YP_001136285.1| 50S ribosomal protein L18 [Mycobacterium gilvum PYR-GCK]
gi|315445960|ref|YP_004078839.1| 50S ribosomal protein L18P [Mycobacterium sp. Spyr1]
gi|145218093|gb|ABP47497.1| LSU ribosomal protein L18P [Mycobacterium gilvum PYR-GCK]
gi|315264263|gb|ADU01005.1| LSU ribosomal protein L18P [Mycobacterium sp. Spyr1]
Length=136
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/122 (80%), Positives = 108/122 (89%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ +++S TRR SRLRRH RLRKK+SGTAERPRLVV+RS+RHIHVQLV+DL G T+AAASS
Sbjct 15 VGKNISETRRTSRLRRHARLRKKVSGTAERPRLVVNRSSRHIHVQLVDDLAGVTLAAASS 74
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE DVR GDKKA S RVGQLIAERAKAAGI+ VVFDRGGYTYGGRIAALADAARE+GL
Sbjct 75 IEGDVRATDGDKKAASARVGQLIAERAKAAGIEEVVFDRGGYTYGGRIAALADAARESGL 134
Query 121 SF 122
F
Sbjct 135 KF 136
>gi|312140902|ref|YP_004008238.1| 50S ribosomal protein l18 rplr [Rhodococcus equi 103S]
gi|325675460|ref|ZP_08155144.1| 50S ribosomal protein L18 [Rhodococcus equi ATCC 33707]
gi|311890241|emb|CBH49559.1| 50S ribosomal protein L18 RplR [Rhodococcus equi 103S]
gi|325553431|gb|EGD23109.1| 50S ribosomal protein L18 [Rhodococcus equi ATCC 33707]
Length=135
Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/122 (75%), Positives = 106/122 (87%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + VS TRR+S+ RRH RLRKK+SGT ERPRLVV+RS+RHIHVQLV+DL G T+AAAS+
Sbjct 14 LGKDVSTTRRLSKARRHFRLRKKVSGTPERPRLVVNRSSRHIHVQLVDDLAGKTLAAAST 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVR + GDKKAR +VGQLIAERAKAAG++ VVFDRGG+TY GRIAALADAARE GL
Sbjct 74 IEADVRALEGDKKARGAKVGQLIAERAKAAGVEAVVFDRGGHTYSGRIAALADAAREGGL 133
Query 121 SF 122
F
Sbjct 134 KF 135
>gi|108798004|ref|YP_638201.1| 50S ribosomal protein L18 [Mycobacterium sp. MCS]
gi|119867100|ref|YP_937052.1| 50S ribosomal protein L18 [Mycobacterium sp. KMS]
gi|126433668|ref|YP_001069359.1| 50S ribosomal protein L18 [Mycobacterium sp. JLS]
gi|108768423|gb|ABG07145.1| LSU ribosomal protein L18P [Mycobacterium sp. MCS]
gi|119693189|gb|ABL90262.1| LSU ribosomal protein L18P [Mycobacterium sp. KMS]
gi|126233468|gb|ABN96868.1| LSU ribosomal protein L18P [Mycobacterium sp. JLS]
Length=134
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/119 (84%), Positives = 108/119 (91%), Gaps = 0/119 (0%)
Query 4 SVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEA 63
S+S TRR R+RRH RLRKK+SGTA+RPRLVV+RS+RHIHVQLV+DL GTT+AAASSIEA
Sbjct 16 SISQTRRRDRIRRHARLRKKVSGTAQRPRLVVNRSSRHIHVQLVDDLTGTTLAAASSIEA 75
Query 64 DVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
DVR V GDKKA SVRVGQLIAERAKAAGID VVFDRGGY+YGGRIAALADAARE GL F
Sbjct 76 DVRAVDGDKKAHSVRVGQLIAERAKAAGIDEVVFDRGGYSYGGRIAALADAAREGGLKF 134
>gi|226365611|ref|YP_002783394.1| 50S ribosomal protein L18 [Rhodococcus opacus B4]
gi|226244101|dbj|BAH54449.1| 50S ribosomal protein L18 [Rhodococcus opacus B4]
Length=135
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/122 (72%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + S RR+S++RRH RLRKK+SGT ERPRLVV+RS+RHIHVQLV+DL G T+AAAS+
Sbjct 14 LGKDASTKRRLSKVRRHFRLRKKVSGTPERPRLVVNRSSRHIHVQLVDDLAGHTLAAAST 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
EADVR GDKKA S +VGQLIAERAKAAG++TVVFD GG+ Y GRIAALADAARE GL
Sbjct 74 TEADVRAADGDKKALSAKVGQLIAERAKAAGVETVVFDHGGHGYHGRIAALADAAREGGL 133
Query 121 SF 122
F
Sbjct 134 KF 135
>gi|111023112|ref|YP_706084.1| 50S ribosomal protein L18 [Rhodococcus jostii RHA1]
gi|115504946|sp|Q0S3G0.1|RL18_RHOSR RecName: Full=50S ribosomal protein L18
gi|110822642|gb|ABG97926.1| 50S ribosomal protein L18 [Rhodococcus jostii RHA1]
Length=135
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/122 (72%), Positives = 101/122 (83%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + S RR+S++RRH RLRKK+SGT ERPRLVV+RSARHIHVQLV+DL G T+AAAS+
Sbjct 14 LGKDASTKRRLSKVRRHFRLRKKVSGTPERPRLVVNRSARHIHVQLVDDLAGHTLAAAST 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
EADVR GDKKA S +VGQLIAERAKAAG++ VVFD GG+ Y GRIAALADAARE GL
Sbjct 74 TEADVRAADGDKKALSAKVGQLIAERAKAAGVEAVVFDHGGHGYHGRIAALADAAREGGL 133
Query 121 SF 122
F
Sbjct 134 KF 135
>gi|333918163|ref|YP_004491744.1| 50S ribosomal protein L18 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480384|gb|AEF38944.1| 50S ribosomal protein L18 [Amycolicicoccus subflavus DQS3-9A1]
Length=138
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/118 (75%), Positives = 99/118 (84%), Gaps = 0/118 (0%)
Query 5 VSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEAD 64
VS RRISR RRH RLRKK++GTAERPRL VHRS+RHIHVQ+++DL G T+AAASS+E D
Sbjct 21 VSTQRRISRARRHFRLRKKIAGTAERPRLAVHRSSRHIHVQVIDDLAGRTLAAASSMEPD 80
Query 65 VRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
VR V GDKKARS +VG LIA+RAK AGI+ VVFDRGG Y GRIAALADAARE GL F
Sbjct 81 VRAVEGDKKARSEKVGALIAQRAKDAGIEAVVFDRGGNDYHGRIAALADAAREGGLKF 138
>gi|319948707|ref|ZP_08022828.1| 50S ribosomal protein L18 [Dietzia cinnamea P4]
gi|319437609|gb|EFV92608.1| 50S ribosomal protein L18 [Dietzia cinnamea P4]
Length=131
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/122 (72%), Positives = 99/122 (82%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ S RR R RRH RLRKK+SGT ERPRLVV+RS+RHIH Q+V+DL G T+AAAS+
Sbjct 10 LGTDASTARREGRARRHYRLRKKVSGTPERPRLVVNRSSRHIHAQIVDDLAGRTLAAAST 69
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVR + GDKKARS +VGQL+AERAKAAGID VVFDRGG Y GRIA+LADAARE GL
Sbjct 70 IEADVRSLEGDKKARSAKVGQLLAERAKAAGIDAVVFDRGGNKYHGRIASLADAAREGGL 129
Query 121 SF 122
F
Sbjct 130 EF 131
>gi|226305358|ref|YP_002765316.1| 50S ribosomal protein L18 [Rhodococcus erythropolis PR4]
gi|229489641|ref|ZP_04383504.1| ribosomal protein L18 [Rhodococcus erythropolis SK121]
gi|226184473|dbj|BAH32577.1| 50S ribosomal protein L18 [Rhodococcus erythropolis PR4]
gi|229323738|gb|EEN89496.1| ribosomal protein L18 [Rhodococcus erythropolis SK121]
Length=135
Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/122 (71%), Positives = 101/122 (83%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + S RR+S+ RRH RLRKK+SGT ERPRLVV+RS+RHIHVQLV+DL G T+A+AS+
Sbjct 14 LGKDASTKRRLSKTRRHFRLRKKVSGTPERPRLVVNRSSRHIHVQLVDDLAGHTLASAST 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVR GDKKA S +VGQLIAERAKAAG++ VVFD GG+ Y GRIAALADAARE GL
Sbjct 74 IEADVRVAEGDKKAASAKVGQLIAERAKAAGVEAVVFDHGGHGYHGRIAALADAAREGGL 133
Query 121 SF 122
F
Sbjct 134 KF 135
>gi|54022757|ref|YP_116999.1| 50S ribosomal protein L18 [Nocardia farcinica IFM 10152]
gi|73621632|sp|Q5Z1Q6.1|RL18_NOCFA RecName: Full=50S ribosomal protein L18
gi|54014265|dbj|BAD55635.1| putative ribosomal protein L18 [Nocardia farcinica IFM 10152]
Length=135
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/122 (69%), Positives = 99/122 (82%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + VS RR+S+ RRH RLRKK++GT ERPRLVVHRS+RH+H QLV+D G T+AAASS
Sbjct 14 LGKDVSTQRRLSKARRHFRLRKKIAGTTERPRLVVHRSSRHLHAQLVDDTVGKTIAAASS 73
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE DVR V GDK A+ +VG+LIA RAKAAG++ VVFDRGG+ Y GRIAALADAARE GL
Sbjct 74 IEPDVRAVEGDKTAKGKKVGELIAARAKAAGVEAVVFDRGGHDYHGRIAALADAAREGGL 133
Query 121 SF 122
F
Sbjct 134 KF 135
>gi|262203559|ref|YP_003274767.1| 50S ribosomal protein L18 [Gordonia bronchialis DSM 43247]
gi|262086906|gb|ACY22874.1| ribosomal protein L18 [Gordonia bronchialis DSM 43247]
Length=134
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/122 (69%), Positives = 97/122 (80%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + VS RR + + RH RLRKK+SGT ERPRL V RS+RHIHVQL++DL G T+AAASS
Sbjct 13 LGKDVSTRRRTATVNRHFRLRKKVSGTPERPRLAVKRSSRHIHVQLIDDLAGKTLAAASS 72
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVR GDK A++ +VG+LIA RAKAAG+D VVFDRGG Y GRIAALADAARE GL
Sbjct 73 IEADVRAAGGDKSAQAKKVGELIAARAKAAGVDAVVFDRGGKDYHGRIAALADAAREGGL 132
Query 121 SF 122
F
Sbjct 133 QF 134
>gi|331699160|ref|YP_004335399.1| 50S ribosomal protein L18 [Pseudonocardia dioxanivorans CB1190]
gi|326953849|gb|AEA27546.1| ribosomal protein L18 [Pseudonocardia dioxanivorans CB1190]
Length=140
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/121 (67%), Positives = 99/121 (82%), Gaps = 0/121 (0%)
Query 2 AQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSI 61
A ++S+TRR++R RRH RLRKK++GT RPRL V RS+RH+ VQL++DL G T+AAAS++
Sbjct 20 ASNISSTRRVARTRRHARLRKKIAGTPARPRLAVKRSSRHVFVQLIDDLAGHTLAAASTL 79
Query 62 EADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLS 121
EADV V GDKKA++ +VG+LIA RAK+AGID VVFD GG Y GRIAALADAARE GL
Sbjct 80 EADVASVEGDKKAKAAKVGELIAARAKSAGIDAVVFDHGGNGYHGRIAALADAAREGGLE 139
Query 122 F 122
F
Sbjct 140 F 140
>gi|118471867|ref|YP_885853.1| 50S ribosomal protein L18 [Mycobacterium smegmatis str. MC2 155]
gi|118173154|gb|ABK74050.1| ribosomal protein L18 [Mycobacterium smegmatis str. MC2 155]
Length=127
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/122 (82%), Positives = 111/122 (91%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ Q++S RR +RLRRH RLRKK++GTAE PRLVV+RSARHIHVQLVNDLNGTT+AAASS
Sbjct 6 VGQNISEVRRNARLRRHARLRKKVAGTAEVPRLVVNRSARHIHVQLVNDLNGTTLAAASS 65
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVR + GDKKA SVRVGQLIAERAKAAG++TVVFDRGGYTYGGRIAALADAARE GL
Sbjct 66 IEADVRAIDGDKKAHSVRVGQLIAERAKAAGVETVVFDRGGYTYGGRIAALADAAREAGL 125
Query 121 SF 122
F
Sbjct 126 KF 127
>gi|340795293|ref|YP_004760756.1| 50S ribosomal protein L18 [Corynebacterium variabile DSM 44702]
gi|340535203|gb|AEK37683.1| 50S ribosomal protein L18 [Corynebacterium variabile DSM 44702]
Length=133
Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/106 (72%), Positives = 92/106 (87%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H RLRK +SGTAE PRLVVHR++RH+HVQL++D+ G T+AAAS+ EAD+R + GDKKAR
Sbjct 28 HYRLRKNISGTAETPRLVVHRTSRHMHVQLIDDVAGHTLAAASTTEADIRAMEGDKKARG 87
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
R+G+LIAERAKAAG++TVVFDRGGY Y GR+AALADAARE GL F
Sbjct 88 ARIGELIAERAKAAGVETVVFDRGGYQYHGRVAALADAAREGGLKF 133
>gi|227487090|ref|ZP_03917406.1| 50S ribosomal protein L18 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541742|ref|ZP_03971791.1| 50S ribosomal protein L18 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227093164|gb|EEI28476.1| 50S ribosomal protein L18 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182448|gb|EEI63420.1| 50S ribosomal protein L18 [Corynebacterium glucuronolyticum ATCC
51866]
Length=133
Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 99/122 (82%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + VS RR +R +RH R+RK L GTAE PRLVVHRS+RH+HVQ+++DL G T+AAASS
Sbjct 12 VGKDVSTRRRAARAQRHFRIRKNLRGTAEVPRLVVHRSSRHVHVQIIDDLAGHTLAAASS 71
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVR GDKKAR+ +VGQLIAERAK AGI VVFDRGGY Y GR+AALADAARE GL
Sbjct 72 IEADVRATEGDKKARAAKVGQLIAERAKKAGITKVVFDRGGYKYHGRVAALADAAREGGL 131
Query 121 SF 122
F
Sbjct 132 EF 133
>gi|296141081|ref|YP_003648324.1| 50S ribosomal protein L18 [Tsukamurella paurometabola DSM 20162]
gi|296029215|gb|ADG79985.1| ribosomal protein L18 [Tsukamurella paurometabola DSM 20162]
Length=134
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/122 (66%), Positives = 98/122 (81%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + VS RR S+ RRH RLRKK+ GTA RPRL V RS+RHIHVQL++DL G T+A+AS+
Sbjct 13 VGKDVSTRRRTSKARRHFRLRKKIEGTAVRPRLAVKRSSRHIHVQLIDDLKGHTLASAST 72
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
+EADV+ GDK A++ +VG+LIA RAKAAG+D VVFDRGG Y GRIAALADAARE GL
Sbjct 73 LEADVKAAGGDKSAQAKKVGELIAARAKAAGVDAVVFDRGGNKYHGRIAALADAAREGGL 132
Query 121 SF 122
+F
Sbjct 133 TF 134
>gi|237786353|ref|YP_002907058.1| 50S ribosomal protein L18 [Corynebacterium kroppenstedtii DSM
44385]
gi|259646094|sp|C4LL10.1|RL18_CORK4 RecName: Full=50S ribosomal protein L18
gi|237759265|gb|ACR18515.1| 50S ribosomal protein L18 [Corynebacterium kroppenstedtii DSM
44385]
Length=131
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/122 (64%), Positives = 98/122 (81%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + ++ RR++R RH R+RK L GTAE PRLVVHR++RH+HVQ+++D G T+AAASS
Sbjct 10 IGKDIATRRRVARKARHFRIRKNLRGTAEIPRLVVHRTSRHMHVQVIDDTIGHTLAAASS 69
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IE +VR + GDKKAR +VG+LIAERAKA GI+TV FDRGGY Y GR+AALADAARE GL
Sbjct 70 IEPEVRAMEGDKKARGAKVGELIAERAKAKGIETVKFDRGGYKYHGRVAALADAAREGGL 129
Query 121 SF 122
F
Sbjct 130 KF 131
>gi|343927717|ref|ZP_08767185.1| 50S ribosomal protein L18 [Gordonia alkanivorans NBRC 16433]
gi|343762358|dbj|GAA14111.1| 50S ribosomal protein L18 [Gordonia alkanivorans NBRC 16433]
Length=134
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/122 (68%), Positives = 97/122 (80%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + VS RR + + RH RLRKK+SGT RPRL V RS+RHIHVQL++DL G T+AAASS
Sbjct 13 LGKDVSTRRRKATVNRHFRLRKKVSGTPARPRLAVKRSSRHIHVQLIDDLAGKTLAAASS 72
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVR GDK A++ +VG+LIA RAKAAG++ VVFDRGG Y GRIAALADAARE GL
Sbjct 73 IEADVRAAGGDKSAQARKVGELIAARAKAAGVEAVVFDRGGKDYHGRIAALADAAREGGL 132
Query 121 SF 122
SF
Sbjct 133 SF 134
>gi|336326408|ref|YP_004606374.1| 50S ribosomal protein L18 [Corynebacterium resistens DSM 45100]
gi|336102390|gb|AEI10210.1| 50S ribosomal protein L18 [Corynebacterium resistens DSM 45100]
Length=136
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/106 (72%), Positives = 90/106 (85%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H R+RK L+GTAE PRLVVHRS+RH+H QL++D+ G T+AAAS++EADVR + GDKKAR
Sbjct 31 HFRIRKNLAGTAETPRLVVHRSSRHMHAQLIDDVAGHTLAAASTLEADVRAMEGDKKARG 90
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VGQLIAERAKAAGI+ VVFDR GY Y GR+AALADAARE GL F
Sbjct 91 AKVGQLIAERAKAAGIENVVFDRAGYKYHGRVAALADAAREGGLKF 136
>gi|300779809|ref|ZP_07089665.1| 50S ribosomal protein L18 [Corynebacterium genitalium ATCC 33030]
gi|300533919|gb|EFK54978.1| 50S ribosomal protein L18 [Corynebacterium genitalium ATCC 33030]
Length=134
Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/106 (71%), Positives = 89/106 (84%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H R+RK L GT E PRLVVHRS+RH+HVQ+++DL G T+ +ASS+E DVRGV GDKKA++
Sbjct 29 HNRIRKTLRGTPETPRLVVHRSSRHMHVQVIDDLAGHTLVSASSMEEDVRGVEGDKKAKA 88
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VG+LIAERAKAAGID VVFDR GY Y GR+AALADAARE GL F
Sbjct 89 AKVGELIAERAKAAGIDEVVFDRAGYKYHGRVAALADAAREGGLKF 134
>gi|38233135|ref|NP_938902.1| 50S ribosomal protein L18 [Corynebacterium diphtheriae NCTC 13129]
gi|38199394|emb|CAE49037.1| 50S ribosomal protein L18 [Corynebacterium diphtheriae]
Length=122
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/122 (68%), Positives = 101/122 (83%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
M + +S RRI+R RRH R+RK L GTAE PRLVVHRS+RH+HVQ+++D+ G T+AAAS+
Sbjct 1 MGKDISTRRRIARARRHDRIRKNLRGTAETPRLVVHRSSRHMHVQVIDDIAGRTLAAAST 60
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
+EA+VR + GDKKA+ +VGQLIAERA+AAGI +VFDRGGY Y GRIAALADAARE GL
Sbjct 61 LEAEVRALEGDKKAKGAKVGQLIAERAQAAGITAIVFDRGGYKYHGRIAALADAAREGGL 120
Query 121 SF 122
F
Sbjct 121 KF 122
>gi|300857787|ref|YP_003782770.1| 50S ribosomal protein L18 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685241|gb|ADK28163.1| 50S ribosomal protein L18 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205525|gb|ADL09867.1| 50S ribosomal protein L18 [Corynebacterium pseudotuberculosis
C231]
gi|302330079|gb|ADL20273.1| 50S ribosomal protein L18 [Corynebacterium pseudotuberculosis
1002]
gi|308275761|gb|ADO25660.1| 50S ribosomal protein L18 [Corynebacterium pseudotuberculosis
I19]
gi|341824188|gb|AEK91709.1| 50S ribosomal protein L18 [Corynebacterium pseudotuberculosis
PAT10]
Length=135
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/106 (68%), Positives = 90/106 (85%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H R+RK L GTAE PRLVVHR++RH+HVQ+++D G T+AAAS++EA+VR + GDKKA+
Sbjct 30 HNRIRKNLCGTAETPRLVVHRTSRHMHVQVIDDFAGHTLAAASTLEAEVRAIEGDKKAKG 89
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VGQLIAERAKAAGI+++VFDR GY Y GR+AALADAARE GL F
Sbjct 90 AKVGQLIAERAKAAGIESIVFDRAGYKYHGRVAALADAAREGGLKF 135
>gi|227832260|ref|YP_002833967.1| 50S ribosomal protein L18 [Corynebacterium aurimucosum ATCC 700975]
gi|262183884|ref|ZP_06043305.1| 50S ribosomal protein L18 [Corynebacterium aurimucosum ATCC 700975]
gi|227453276|gb|ACP32029.1| 50S ribosomal protein L18 [Corynebacterium aurimucosum ATCC 700975]
Length=133
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/106 (71%), Positives = 89/106 (84%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H R+RK L GT E PRLVVHRS+RH+HVQ+++DL G T+ AASS+EADVR + GDKKA++
Sbjct 28 HFRIRKTLRGTPEAPRLVVHRSSRHMHVQVIDDLAGHTLVAASSMEADVRALEGDKKAKA 87
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VGQLIAERAKAAGI+ VVFDR GY Y GR+AALADAARE GL F
Sbjct 88 AKVGQLIAERAKAAGIEQVVFDRAGYKYHGRVAALADAAREGGLQF 133
>gi|337290038|ref|YP_004629059.1| 50S ribosomal protein L18 [Corynebacterium ulcerans BR-AD22]
gi|334696161|gb|AEG80958.1| 50S ribosomal protein L18 [Corynebacterium ulcerans 809]
gi|334698344|gb|AEG83140.1| 50S ribosomal protein L18 [Corynebacterium ulcerans BR-AD22]
Length=135
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/106 (68%), Positives = 90/106 (85%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H R+RK L GTAE PRLVVHR++RH+HVQ+++D G T+AAAS++EA+VR + GDKKA+
Sbjct 30 HNRIRKNLRGTAETPRLVVHRTSRHMHVQVIDDFAGHTLAAASTLEAEVRAIEGDKKAKG 89
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VGQLIAERAKAAGI+++VFDR GY Y GR+AALADAARE GL F
Sbjct 90 AKVGQLIAERAKAAGIESIVFDRAGYKYHGRVAALADAAREGGLKF 135
>gi|73621585|sp|Q6NJ86.2|RL18_CORDI RecName: Full=50S ribosomal protein L18
Length=135
Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/106 (70%), Positives = 90/106 (85%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H R+RK L GTAE PRLVVHRS+RH+HVQ+++D+ G T+AAAS++EA+VR + GDKKA+
Sbjct 30 HDRIRKNLRGTAETPRLVVHRSSRHMHVQVIDDIAGRTLAAASTLEAEVRALEGDKKAKG 89
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VGQLIAERA+AAGI +VFDRGGY Y GRIAALADAARE GL F
Sbjct 90 AKVGQLIAERAQAAGITAIVFDRGGYKYHGRIAALADAAREGGLKF 135
>gi|117927531|ref|YP_872082.1| 50S ribosomal protein L18P [Acidothermus cellulolyticus 11B]
gi|189041537|sp|A0LRN6.1|RL18_ACIC1 RecName: Full=50S ribosomal protein L18
gi|117647994|gb|ABK52096.1| LSU ribosomal protein L18P [Acidothermus cellulolyticus 11B]
Length=128
Score = 153 bits (387), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/114 (68%), Positives = 93/114 (82%), Gaps = 0/114 (0%)
Query 7 ATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVR 66
+TR +R+RRH R+RKK+SGT ERPRLVVHRSARH+ VQ+V+D G T+A+ASS E ++R
Sbjct 13 STRTAARMRRHFRVRKKISGTPERPRLVVHRSARHVFVQIVDDTRGHTLASASSFEPEMR 72
Query 67 GVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
GDK A++ RVGQLIAERAKAAGI TVVFDR GY Y GR+AA+AD ARE GL
Sbjct 73 SFAGDKTAKARRVGQLIAERAKAAGITTVVFDRAGYRYHGRVAAIADGAREGGL 126
>gi|334564592|ref|ZP_08517583.1| 50S ribosomal protein L18 [Corynebacterium bovis DSM 20582]
Length=134
Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/106 (68%), Positives = 89/106 (84%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H RLRK +SGTAE PRLVVHR++RH+HVQL++D G T+AAAS++E ++RG+ GDKK R
Sbjct 29 HYRLRKNISGTAETPRLVVHRTSRHMHVQLIDDTAGHTLAAASTMEPEIRGMEGDKKTRG 88
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VG+LIA+RAK AGI+ VVFDRGGY Y GR+AALADAARE GL F
Sbjct 89 AKVGELIAQRAKDAGIEAVVFDRGGYQYHGRVAALADAAREGGLKF 134
>gi|260579241|ref|ZP_05847127.1| 50S ribosomal protein L18 [Corynebacterium jeikeium ATCC 43734]
gi|258602630|gb|EEW15921.1| 50S ribosomal protein L18 [Corynebacterium jeikeium ATCC 43734]
Length=134
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/106 (69%), Positives = 88/106 (84%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H R+RK LSGT E PRLVVHR++RH+H Q+++D+ G T+ AAS++EADVR + GDKKAR
Sbjct 29 HFRIRKTLSGTPETPRLVVHRTSRHMHAQVIDDVAGHTLVAASTMEADVRAMEGDKKARG 88
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VGQLIAERAKAAGI+ VVFDR GY Y GR+AALADAARE GL F
Sbjct 89 AKVGQLIAERAKAAGIEAVVFDRAGYKYHGRVAALADAAREGGLKF 134
>gi|326383214|ref|ZP_08204902.1| 50S ribosomal protein L18 [Gordonia neofelifaecis NRRL B-59395]
gi|326197964|gb|EGD55150.1| 50S ribosomal protein L18 [Gordonia neofelifaecis NRRL B-59395]
Length=132
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/122 (67%), Positives = 98/122 (81%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + VS RR + RRH RLRKK++GTAERPR+ V RS+RHIHVQ+++DL G T+AAASS
Sbjct 11 LGKDVSTRRRTATNRRHFRLRKKINGTAERPRMAVKRSSRHIHVQVIDDLTGRTLAAASS 70
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
IEADVR GDK A++ +VG+L+A RAKAAGI+ VVFDRGG Y GRIAALADAARE GL
Sbjct 71 IEADVRAAGGDKSAQAAKVGELVAARAKAAGIEAVVFDRGGKAYHGRIAALADAAREGGL 130
Query 121 SF 122
F
Sbjct 131 QF 132
>gi|68536885|ref|YP_251590.1| 50S ribosomal protein L18 [Corynebacterium jeikeium K411]
gi|115504885|sp|Q4JT85.1|RL18_CORJK RecName: Full=50S ribosomal protein L18
gi|68264484|emb|CAI37972.1| 50S ribosomal protein L18 [Corynebacterium jeikeium K411]
Length=134
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/106 (68%), Positives = 88/106 (84%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H R+RK LSGT E PRLV+HR++RH+H Q+++D+ G T+ AAS++EADVR + GDKKAR
Sbjct 29 HFRIRKTLSGTPETPRLVIHRTSRHMHAQVIDDVAGHTLVAASTMEADVRAMEGDKKARG 88
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VGQLIAERAKAAGI+ VVFDR GY Y GR+AALADAARE GL F
Sbjct 89 AKVGQLIAERAKAAGIEAVVFDRAGYKYHGRVAALADAAREGGLKF 134
>gi|25027107|ref|NP_737161.1| 50S ribosomal protein L18 [Corynebacterium efficiens YS-314]
gi|73621586|sp|Q8FS53.1|RL18_COREF RecName: Full=50S ribosomal protein L18
gi|23492387|dbj|BAC17361.1| putative 50S ribosomal protein L18 [Corynebacterium efficiens
YS-314]
Length=134
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/103 (72%), Positives = 86/103 (84%), Gaps = 0/103 (0%)
Query 20 LRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARSVRV 79
+RK L GT E PRLVVHRS+RH+HVQ+++DL G T+AAASSIE +VR V GDKKA+ +V
Sbjct 32 IRKTLRGTPEAPRLVVHRSSRHMHVQIIDDLAGHTLAAASSIEPEVRAVEGDKKAKGAKV 91
Query 80 GQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
GQLIAERAKAAGI+ VVFDR GY Y GR+AALADAARE GL F
Sbjct 92 GQLIAERAKAAGIEQVVFDRAGYKYHGRVAALADAAREGGLKF 134
>gi|19551776|ref|NP_599778.1| 50S ribosomal protein L18 [Corynebacterium glutamicum ATCC 13032]
gi|62389431|ref|YP_224833.1| 50S ribosomal protein L18 [Corynebacterium glutamicum ATCC 13032]
gi|145294690|ref|YP_001137511.1| 50S ribosomal protein L18 [Corynebacterium glutamicum R]
gi|73621587|sp|Q8NSX6.1|RL18_CORGL RecName: Full=50S ribosomal protein L18
gi|21323304|dbj|BAB97932.1| Ribosomal protein L18 [Corynebacterium glutamicum ATCC 13032]
gi|41324765|emb|CAF19247.1| 50S RIBOSOMAL PROTEIN L18 [Corynebacterium glutamicum ATCC 13032]
gi|140844610|dbj|BAF53609.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045853|gb|EGV41522.1| 50S ribosomal protein L18 [Corynebacterium glutamicum S9114]
Length=134
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/103 (71%), Positives = 86/103 (84%), Gaps = 0/103 (0%)
Query 20 LRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARSVRV 79
+RK L GT E PRLVVHRS+RH+HVQ+++D+ G T+AAASSIEA+VR GDKKA+ +V
Sbjct 32 IRKNLRGTPEAPRLVVHRSSRHMHVQIIDDVAGHTLAAASSIEAEVRATEGDKKAKGAKV 91
Query 80 GQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
GQLIAERAKAAGI+ VVFDR GY Y GR+AALADAARE GL F
Sbjct 92 GQLIAERAKAAGIEQVVFDRAGYKYHGRVAALADAAREGGLKF 134
>gi|284992858|ref|YP_003411412.1| 50S ribosomal protein L18 [Geodermatophilus obscurus DSM 43160]
gi|284066103|gb|ADB77041.1| ribosomal protein L18 [Geodermatophilus obscurus DSM 43160]
Length=136
Score = 150 bits (379), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/118 (67%), Positives = 92/118 (78%), Gaps = 0/118 (0%)
Query 5 VSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEAD 64
VS RR+SRLRRHTRLRK++ GT ERPRLVV RS+RHIHVQ+V+D G T+ +AS+++A
Sbjct 19 VSTARRVSRLRRHTRLRKRVGGTPERPRLVVKRSSRHIHVQVVDDTVGRTLVSASTLDAS 78
Query 65 VRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+R GDK + RVG L+AERAKAAGI VVFDRGG Y GRIAALAD ARE GL F
Sbjct 79 LRTAEGDKSTLARRVGALVAERAKAAGITAVVFDRGGNRYQGRIAALADGAREGGLDF 136
>gi|255324764|ref|ZP_05365878.1| ribosomal protein L18 [Corynebacterium tuberculostearicum SK141]
gi|311740047|ref|ZP_07713881.1| 50S ribosomal protein L18 [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298239|gb|EET77542.1| ribosomal protein L18 [Corynebacterium tuberculostearicum SK141]
gi|311305120|gb|EFQ81189.1| 50S ribosomal protein L18 [Corynebacterium pseudogenitalium ATCC
33035]
Length=133
Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/106 (67%), Positives = 89/106 (84%), Gaps = 0/106 (0%)
Query 17 HTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARS 76
H R+RK L GT E PRLV+HRS+RH+HVQ+++DL G T+ +ASS+EADVR + GDKKA++
Sbjct 28 HFRIRKTLRGTPEAPRLVLHRSSRHMHVQVIDDLAGHTLVSASSMEADVRALEGDKKAKA 87
Query 77 VRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+VG+L+AERAKAAGI+ VVFDR GY Y GR+AALADAARE GL F
Sbjct 88 AKVGELVAERAKAAGIEHVVFDRAGYKYHGRVAALADAAREGGLKF 133
>gi|256380582|ref|YP_003104242.1| 50S ribosomal protein L18 [Actinosynnema mirum DSM 43827]
gi|255924885|gb|ACU40396.1| ribosomal protein L18 [Actinosynnema mirum DSM 43827]
Length=132
Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 101/122 (83%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + +S TRRI++ RRH RLRKK+SGTAERPRLVVHRS++HI VQ+++DL G T+AAASS
Sbjct 11 VGKDISTTRRIAKTRRHFRLRKKVSGTAERPRLVVHRSSKHITVQIIDDLAGHTLAAASS 70
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
+EADVR + GDKKAR+ +VGQL A RAK AGI VVFDRGG Y GRIAALADAARE GL
Sbjct 71 VEADVRALDGDKKARAAKVGQLAAARAKDAGISKVVFDRGGNAYHGRIAALADAAREAGL 130
Query 121 SF 122
F
Sbjct 131 EF 132
>gi|288917246|ref|ZP_06411615.1| ribosomal protein L18 [Frankia sp. EUN1f]
gi|288351437|gb|EFC85645.1| ribosomal protein L18 [Frankia sp. EUN1f]
Length=124
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/119 (64%), Positives = 97/119 (82%), Gaps = 0/119 (0%)
Query 4 SVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEA 63
S SA RR ++LRRH R+RKK+SGT RPRLVV RS+RHI+ Q+++D+ G T+A+AS++E
Sbjct 6 SASARRRTAKLRRHVRVRKKVSGTPARPRLVVTRSSRHIYAQVIDDVAGHTLASASTLED 65
Query 64 DVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF 122
+R GDK A++ VG+L+AERA+AAGID VVFDRGG TY GRIAALADAARE GL+F
Sbjct 66 GLRASEGDKSAKAREVGRLVAERARAAGIDAVVFDRGGRTYHGRIAALADAAREGGLNF 124
>gi|172040030|ref|YP_001799744.1| 50S ribosomal protein L18 [Corynebacterium urealyticum DSM 7109]
gi|171851334|emb|CAQ04310.1| 50S ribosomal protein L18 [Corynebacterium urealyticum DSM 7109]
Length=136
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/122 (63%), Positives = 97/122 (80%), Gaps = 0/122 (0%)
Query 1 MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVVHRSARHIHVQLVNDLNGTTVAAASS 60
+ + +S RR++R RRH R+RK + GT E PRLVVHRS+RH+H Q+++D G T+ AAS+
Sbjct 15 LGKDISTRRRVARSRRHNRIRKTIQGTPETPRLVVHRSSRHMHAQIIDDTVGHTLCAAST 74
Query 61 IEADVRGVPGDKKARSVRVGQLIAERAKAAGIDTVVFDRGGYTYGGRIAALADAARENGL 120
+EA+VRGV GDKKAR +VG+LIA+RAK AGI+ VVFDR GY Y GR+AALADAARE GL
Sbjct 75 LEAEVRGVEGDKKARGAKVGELIAQRAKEAGIEAVVFDRAGYQYHGRVAALADAAREGGL 134
Query 121 SF 122
F
Sbjct 135 KF 136
Lambda K H
0.320 0.132 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127525862838
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40