BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0722 Length=65 Score E Sequences producing significant alignments: (Bits) Value gi|15607862|ref|NP_215236.1| 50S ribosomal protein L30 [Mycobact... 129 2e-28 gi|118616591|ref|YP_904923.1| 50S ribosomal protein L30 [Mycobac... 114 7e-24 gi|240167727|ref|ZP_04746386.1| 50S ribosomal protein L30 [Mycob... 111 3e-23 gi|15827984|ref|NP_302247.1| 50S ribosomal protein L30 [Mycobact... 110 9e-23 gi|41410283|ref|NP_963119.1| 50S ribosomal protein L30 [Mycobact... 109 2e-22 gi|342861816|ref|ZP_08718461.1| 50S ribosomal protein L30 [Mycob... 108 4e-22 gi|254818381|ref|ZP_05223382.1| 50S ribosomal protein L30 [Mycob... 105 3e-21 gi|296168581|ref|ZP_06850385.1| 50S ribosomal protein L30 [Mycob... 103 8e-21 gi|145225605|ref|YP_001136283.1| 50S ribosomal protein L30 [Myco... 97.4 6e-19 gi|118473233|ref|YP_885855.1| 50S ribosomal protein L30 [Mycobac... 96.3 1e-18 gi|120402351|ref|YP_952180.1| 50S ribosomal protein L30 [Mycobac... 94.7 4e-18 gi|169630874|ref|YP_001704523.1| 50S ribosomal protein L30 [Myco... 94.4 6e-18 gi|333991954|ref|YP_004524568.1| 50S ribosomal protein L30 RpmD ... 93.2 1e-17 gi|296395270|ref|YP_003660154.1| 50S ribosomal protein L30 [Segn... 89.7 1e-16 gi|317509246|ref|ZP_07966867.1| ribosomal protein L30p/L7e [Segn... 86.3 1e-15 gi|333918165|ref|YP_004491746.1| 50S ribosomal protein L30 [Amyc... 84.0 6e-15 gi|312140900|ref|YP_004008236.1| 50S ribosomal protein l30 rpmd ... 84.0 7e-15 gi|319948705|ref|ZP_08022826.1| 50S ribosomal protein L30 [Dietz... 81.3 5e-14 gi|126433670|ref|YP_001069361.1| 50S ribosomal protein L30 [Myco... 80.9 6e-14 gi|54022759|ref|YP_117001.1| 50S ribosomal protein L30 [Nocardia... 80.9 6e-14 gi|111023114|ref|YP_706086.1| 50S ribosomal protein L30 [Rhodoco... 80.9 7e-14 gi|302524011|ref|ZP_07276353.1| ribosomal protein L30 [Streptomy... 80.5 7e-14 gi|256380580|ref|YP_003104240.1| 50S ribosomal protein L30 [Acti... 79.7 1e-13 gi|300782626|ref|YP_003762917.1| 50S ribosomal protein L30 [Amyc... 79.3 2e-13 gi|108798006|ref|YP_638203.1| 50S ribosomal protein L30 [Mycobac... 79.0 2e-13 gi|296141079|ref|YP_003648322.1| 50S ribosomal protein L30 [Tsuk... 78.2 3e-13 gi|226305360|ref|YP_002765318.1| 50S ribosomal protein L30 [Rhod... 77.8 5e-13 gi|325068049|ref|ZP_08126722.1| 50S ribosomal protein L30 [Actin... 77.0 1e-12 gi|320533209|ref|ZP_08033924.1| ribosomal protein L30 [Actinomyc... 76.6 1e-12 gi|227497199|ref|ZP_03927447.1| ribosomal protein L30 [Actinomyc... 76.3 1e-12 gi|329945747|ref|ZP_08293434.1| ribosomal protein L30 [Actinomyc... 75.9 2e-12 gi|262203557|ref|YP_003274765.1| 50S ribosomal protein L30 [Gord... 75.1 3e-12 gi|340359395|ref|ZP_08681881.1| 50S ribosomal protein L30 [Actin... 75.1 3e-12 gi|257054488|ref|YP_003132320.1| 50S ribosomal protein L30P [Sac... 75.1 3e-12 gi|326383216|ref|ZP_08204904.1| 50S ribosomal protein L30 [Gordo... 73.6 9e-12 gi|237786351|ref|YP_002907056.1| 50S ribosomal protein L30 [Cory... 73.2 1e-11 gi|324999238|ref|ZP_08120350.1| 50S ribosomal protein L30 [Pseud... 72.8 2e-11 gi|343927715|ref|ZP_08767183.1| 50S ribosomal protein L30 [Gordo... 72.4 2e-11 gi|213964848|ref|ZP_03393047.1| ribosomal protein L30 [Corynebac... 72.4 2e-11 gi|260579239|ref|ZP_05847125.1| conserved domain protein [Coryne... 70.9 6e-11 gi|284992856|ref|YP_003411410.1| 50S ribosomal protein L30 [Geod... 70.1 1e-10 gi|19551778|ref|NP_599780.1| 50S ribosomal protein L30 [Coryneba... 70.1 1e-10 gi|134103246|ref|YP_001108907.1| 50S ribosomal protein L30 [Sacc... 70.1 1e-10 gi|25027109|ref|NP_737163.1| 50S ribosomal protein L30 [Coryneba... 70.1 1e-10 gi|256831845|ref|YP_003160572.1| 50S ribosomal protein L30 [Jone... 69.7 1e-10 gi|172040032|ref|YP_001799746.1| 50S ribosomal protein L30 [Cory... 69.3 2e-10 gi|261338261|ref|ZP_05966145.1| ribosomal protein L30 [Bifidobac... 69.3 2e-10 gi|288917248|ref|ZP_06411617.1| ribosomal protein L30 [Frankia s... 68.9 2e-10 gi|68536883|ref|YP_251588.1| 50S ribosomal protein L30 [Coryneba... 68.9 2e-10 gi|145294693|ref|YP_001137514.1| 50S ribosomal protein L30 [Cory... 68.9 3e-10 >gi|15607862|ref|NP_215236.1| 50S ribosomal protein L30 [Mycobacterium tuberculosis H37Rv] gi|15840130|ref|NP_335167.1| 50S ribosomal protein L30 [Mycobacterium tuberculosis CDC1551] gi|31791908|ref|NP_854401.1| 50S ribosomal protein L30 [Mycobacterium bovis AF2122/97] 83 more sequence titles Length=65 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/65 (100%), Positives = 65/65 (100%), Gaps = 0/65 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ Sbjct 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 Query 61 TGGKT 65 TGGKT Sbjct 61 TGGKT 65 >gi|118616591|ref|YP_904923.1| 50S ribosomal protein L30 [Mycobacterium ulcerans Agy99] gi|183981075|ref|YP_001849366.1| 50S ribosomal protein L30, RpmD [Mycobacterium marinum M] gi|205829506|sp|B2HCT9.1|RL30_MYCMM RecName: Full=50S ribosomal protein L30 gi|205829508|sp|A0PM83.1|RL30_MYCUA RecName: Full=50S ribosomal protein L30 gi|118568701|gb|ABL03452.1| 50S ribosomal protein L30, RpmD [Mycobacterium ulcerans Agy99] gi|183174401|gb|ACC39511.1| 50S ribosomal protein L30, RpmD [Mycobacterium marinum M] Length=72 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 58/65 (90%), Positives = 62/65 (96%), Gaps = 2/65 (3%) Query 2 SQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ- 60 +QLKITQVRSTIGARWKQRESLRTLGLRRIRH+V+R+DNA TRGLIAVVRHLVEVEPAQ Sbjct 6 NQLKITQVRSTIGARWKQRESLRTLGLRRIRHTVVRDDNAQTRGLIAVVRHLVEVEPAQN 65 Query 61 -TGGK 64 TGGK Sbjct 66 GTGGK 70 >gi|240167727|ref|ZP_04746386.1| 50S ribosomal protein L30 [Mycobacterium kansasii ATCC 12478] Length=69 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 59/68 (87%), Positives = 61/68 (90%), Gaps = 3/68 (4%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEP-- 58 MSQL+ITQVRSTIGARWKQRESLRTLGLRRIRHSV+REDN TRGLIAVVRHLVEVE Sbjct 1 MSQLRITQVRSTIGARWKQRESLRTLGLRRIRHSVVREDNPQTRGLIAVVRHLVEVESTS 60 Query 59 -AQTGGKT 65 A TGGKT Sbjct 61 VAATGGKT 68 >gi|15827984|ref|NP_302247.1| 50S ribosomal protein L30 [Mycobacterium leprae TN] gi|221230461|ref|YP_002503877.1| 50S ribosomal protein L30 [Mycobacterium leprae Br4923] gi|3122733|sp|O33001.1|RL30_MYCLE RecName: Full=50S ribosomal protein L30 gi|254765678|sp|B8ZSA1.1|RL30_MYCLB RecName: Full=50S ribosomal protein L30 gi|2344852|emb|CAB11454.1| ribosomal protein L30 [Mycobacterium leprae] gi|13093537|emb|CAC30795.1| 50S ribosomal protein L30 [Mycobacterium leprae] gi|219933568|emb|CAR71937.1| 50S ribosomal protein L30 [Mycobacterium leprae Br4923] Length=71 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 58/65 (90%), Positives = 59/65 (91%), Gaps = 1/65 (1%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN TRGLIAVVRHLVEVEPA Sbjct 1 MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59 Query 61 TGGKT 65 TGG T Sbjct 60 TGGST 64 >gi|41410283|ref|NP_963119.1| 50S ribosomal protein L30 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118467160|ref|YP_883582.1| 50S ribosomal protein L30 [Mycobacterium avium 104] gi|254776883|ref|ZP_05218399.1| 50S ribosomal protein L30 [Mycobacterium avium subsp. avium ATCC 25291] gi|81570782|sp|Q73S91.1|RL30_MYCPA RecName: Full=50S ribosomal protein L30 gi|166229225|sp|A0QKZ4.1|RL30_MYCA1 RecName: Full=50S ribosomal protein L30 gi|41399117|gb|AAS06735.1| RpmD [Mycobacterium avium subsp. paratuberculosis K-10] gi|118168447|gb|ABK69344.1| ribosomal protein L30 [Mycobacterium avium 104] gi|336460644|gb|EGO39535.1| ribosomal protein L30, bacterial/organelle [Mycobacterium avium subsp. paratuberculosis S397] Length=71 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/68 (86%), Positives = 58/68 (86%), Gaps = 5/68 (7%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDN TRGLIAVV HLVEV PA Sbjct 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNPQTRGLIAVVSHLVEVAPAD 60 Query 61 -----TGG 63 TGG Sbjct 61 ASSAGTGG 68 >gi|342861816|ref|ZP_08718461.1| 50S ribosomal protein L30 [Mycobacterium colombiense CECT 3035] gi|342130633|gb|EGT83937.1| 50S ribosomal protein L30 [Mycobacterium colombiense CECT 3035] Length=72 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 56/67 (84%), Positives = 59/67 (89%), Gaps = 5/67 (7%) Query 2 SQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ- 60 SQLKITQVRSTIGARWKQRESLRTLGLR+IR SV+REDNA TRGLIAVV HLVEVEPA+ Sbjct 3 SQLKITQVRSTIGARWKQRESLRTLGLRKIRQSVVREDNAQTRGLIAVVSHLVEVEPAEA 62 Query 61 ----TGG 63 TGG Sbjct 63 TATGTGG 69 >gi|254818381|ref|ZP_05223382.1| 50S ribosomal protein L30 [Mycobacterium intracellulare ATCC 13950] Length=61 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/59 (92%), Positives = 55/59 (94%), Gaps = 0/59 (0%) Query 2 SQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 SQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDN TRGLIAVV HLVEVE A+ Sbjct 3 SQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNPQTRGLIAVVSHLVEVEEAK 61 >gi|296168581|ref|ZP_06850385.1| 50S ribosomal protein L30 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896644|gb|EFG76283.1| 50S ribosomal protein L30 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=60 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 53/60 (89%), Positives = 55/60 (92%), Gaps = 0/60 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 MSQLKITQVRSTIGARWKQRE+LRTLGLRRIRHSVIREDN TRGLIAVV HLV VE A+ Sbjct 1 MSQLKITQVRSTIGARWKQRETLRTLGLRRIRHSVIREDNPQTRGLIAVVNHLVVVEEAK 60 >gi|145225605|ref|YP_001136283.1| 50S ribosomal protein L30 [Mycobacterium gilvum PYR-GCK] gi|315445958|ref|YP_004078837.1| 50S ribosomal protein L30P [Mycobacterium sp. Spyr1] gi|189042624|sp|A4TED3.1|RL30_MYCGI RecName: Full=50S ribosomal protein L30 gi|145218091|gb|ABP47495.1| LSU ribosomal protein L30P [Mycobacterium gilvum PYR-GCK] gi|315264261|gb|ADU01003.1| LSU ribosomal protein L30P [Mycobacterium sp. Spyr1] Length=61 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 48/60 (80%), Positives = 53/60 (89%), Gaps = 0/60 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M++LKITQVRSTIGARWKQRESLRTLGLR+IR SV+REDNA TRGLI V HLVEVE + Sbjct 1 MAELKITQVRSTIGARWKQRESLRTLGLRKIRQSVVREDNAQTRGLIKTVHHLVEVEEVK 60 >gi|118473233|ref|YP_885855.1| 50S ribosomal protein L30 [Mycobacterium smegmatis str. MC2 155] gi|166229227|sp|A0QSG7.1|RL30_MYCS2 RecName: Full=50S ribosomal protein L30 gi|118174520|gb|ABK75416.1| ribosomal protein L30 [Mycobacterium smegmatis str. MC2 155] Length=61 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 47/58 (82%), Positives = 52/58 (90%), Gaps = 0/58 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEP 58 M++LKITQVRSTIGARWKQRESLRTLGL++IR SV+REDNA TRGLI V HLVEVE Sbjct 1 MAELKITQVRSTIGARWKQRESLRTLGLKKIRQSVVREDNAQTRGLINTVHHLVEVEE 58 >gi|120402351|ref|YP_952180.1| 50S ribosomal protein L30 [Mycobacterium vanbaalenii PYR-1] gi|166230170|sp|A1T4S4.1|RL30_MYCVP RecName: Full=50S ribosomal protein L30 gi|119955169|gb|ABM12174.1| LSU ribosomal protein L30P [Mycobacterium vanbaalenii PYR-1] Length=59 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 47/58 (82%), Positives = 51/58 (88%), Gaps = 0/58 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEP 58 M++LKITQVRSTIGARWKQRESLRTLGLR+IR SV+REDNA TRGLI V HLV VE Sbjct 1 MAELKITQVRSTIGARWKQRESLRTLGLRKIRQSVVREDNAQTRGLIKTVHHLVTVEE 58 >gi|169630874|ref|YP_001704523.1| 50S ribosomal protein L30 [Mycobacterium abscessus ATCC 19977] gi|226703096|sp|B1MGC4.1|RL30_MYCA9 RecName: Full=50S ribosomal protein L30 gi|169242841|emb|CAM63869.1| 50S ribosomal protein L30 [Mycobacterium abscessus] Length=60 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 45/60 (75%), Positives = 53/60 (89%), Gaps = 0/60 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M+ +KITQVRSTIGARWKQRESL+TLGLR+IR +V+REDNA TRGL+ VVRHLV VE + Sbjct 1 MADVKITQVRSTIGARWKQRESLKTLGLRKIRQTVVREDNAQTRGLLQVVRHLVTVEDVK 60 >gi|333991954|ref|YP_004524568.1| 50S ribosomal protein L30 RpmD [Mycobacterium sp. JDM601] gi|333487922|gb|AEF37314.1| 50S ribosomal protein L30 RpmD [Mycobacterium sp. JDM601] Length=62 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/59 (80%), Positives = 50/59 (85%), Gaps = 0/59 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPA 59 M+ LKITQVR TIGARW QRESLRTLGLR+IR SV+REDN TRGLI VV HLVEVE A Sbjct 1 MANLKITQVRGTIGARWNQRESLRTLGLRKIRQSVVREDNPQTRGLIRVVHHLVEVEQA 59 >gi|296395270|ref|YP_003660154.1| 50S ribosomal protein L30 [Segniliparus rotundus DSM 44985] gi|296182417|gb|ADG99323.1| ribosomal protein L30 [Segniliparus rotundus DSM 44985] Length=91 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/60 (69%), Positives = 51/60 (85%), Gaps = 0/60 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 MS+LK+TQ++STIG + K RE+LRTLGL+RIRHSV+R D+A RGL+ VVRHLV VEPA Sbjct 1 MSELKVTQIKSTIGVKPKTREALRTLGLKRIRHSVVRPDDAQNRGLLQVVRHLVVVEPAD 60 >gi|317509246|ref|ZP_07966867.1| ribosomal protein L30p/L7e [Segniliparus rugosus ATCC BAA-974] gi|316252456|gb|EFV11905.1| ribosomal protein L30p/L7e [Segniliparus rugosus ATCC BAA-974] Length=65 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/59 (68%), Positives = 50/59 (85%), Gaps = 0/59 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPA 59 MS+LK+TQ++STIG + K RE+LRTLGL+RIRHSV+R D+A RGL+ VVRHLV VEP Sbjct 1 MSELKVTQIKSTIGVKPKTREALRTLGLKRIRHSVVRPDDAQNRGLLQVVRHLVVVEPV 59 >gi|333918165|ref|YP_004491746.1| 50S ribosomal protein L30 [Amycolicicoccus subflavus DQS3-9A1] gi|333480386|gb|AEF38946.1| 50S ribosomal protein L30 [Amycolicicoccus subflavus DQS3-9A1] Length=59 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 41/57 (72%), Positives = 49/57 (86%), Gaps = 0/57 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 M++L++TQ+RSTIGA KQRES+RTLGL+RIR SV+RED RGLI VVRHLVEVE Sbjct 1 MAELRVTQLRSTIGANPKQRESMRTLGLKRIRQSVVREDTPQNRGLIHVVRHLVEVE 57 >gi|312140900|ref|YP_004008236.1| 50S ribosomal protein l30 rpmd [Rhodococcus equi 103S] gi|325675462|ref|ZP_08155146.1| 50S ribosomal protein L30 [Rhodococcus equi ATCC 33707] gi|311890239|emb|CBH49557.1| 50S ribosomal protein L30 RpmD [Rhodococcus equi 103S] gi|325553433|gb|EGD23111.1| 50S ribosomal protein L30 [Rhodococcus equi ATCC 33707] Length=59 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 40/59 (68%), Positives = 48/59 (82%), Gaps = 0/59 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPA 59 M+QLK+TQV+STIG + QR+S+RTLGL+ IR SV+REDNA RGLI VVRHLV VE Sbjct 1 MAQLKVTQVKSTIGTKQNQRDSMRTLGLKGIRQSVVREDNAQNRGLINVVRHLVTVEEV 59 >gi|319948705|ref|ZP_08022826.1| 50S ribosomal protein L30 [Dietzia cinnamea P4] gi|319437607|gb|EFV92606.1| 50S ribosomal protein L30 [Dietzia cinnamea P4] Length=60 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 40/60 (67%), Positives = 47/60 (79%), Gaps = 0/60 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M+ LKITQVR T+G + QR+SLRTLGL+ IR SV+REDNA TRGLI VV HLV VE + Sbjct 1 MANLKITQVRGTVGTKKNQRDSLRTLGLKGIRKSVVREDNAQTRGLINVVNHLVVVEETE 60 >gi|126433670|ref|YP_001069361.1| 50S ribosomal protein L30 [Mycobacterium sp. JLS] gi|166229228|sp|A3PVE3.1|RL30_MYCSJ RecName: Full=50S ribosomal protein L30 gi|126233470|gb|ABN96870.1| LSU ribosomal protein L30P [Mycobacterium sp. JLS] Length=59 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/47 (83%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLI 47 M++LKITQVR TIGARW QRESLRTLGLR+IR SV+REDNA TRGLI Sbjct 1 MAELKITQVRGTIGARWNQRESLRTLGLRKIRQSVVREDNAQTRGLI 47 >gi|54022759|ref|YP_117001.1| 50S ribosomal protein L30 [Nocardia farcinica IFM 10152] gi|81603030|sp|Q5Z1Q4.1|RL30_NOCFA RecName: Full=50S ribosomal protein L30 gi|54014267|dbj|BAD55637.1| putative ribosomal protein L30 [Nocardia farcinica IFM 10152] Length=59 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/57 (69%), Positives = 47/57 (83%), Gaps = 0/57 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 M+ LK+TQ++S+IGA+ QR+SLRTLGLR IR SV+REDN RGLI VVRHLV VE Sbjct 1 MADLKVTQIKSSIGAKKNQRDSLRTLGLRGIRKSVVREDNPQNRGLINVVRHLVTVE 57 >gi|111023114|ref|YP_706086.1| 50S ribosomal protein L30 [Rhodococcus jostii RHA1] gi|226365613|ref|YP_002783396.1| 50S ribosomal protein L30 [Rhodococcus opacus B4] gi|123144247|sp|Q0S3F8.1|RL30_RHOSR RecName: Full=50S ribosomal protein L30 gi|254765680|sp|C1B030.1|RL30_RHOOB RecName: Full=50S ribosomal protein L30 gi|110822644|gb|ABG97928.1| 50S ribosomal protein L30 [Rhodococcus jostii RHA1] gi|226244103|dbj|BAH54451.1| 50S ribosomal protein L30 [Rhodococcus opacus B4] Length=59 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 38/59 (65%), Positives = 47/59 (80%), Gaps = 0/59 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPA 59 M++LK+TQ++STIG + QR SLRTLGL+ IR +V+REDNA RGLI VVRHLV VE Sbjct 1 MAELKVTQIKSTIGTKQNQRNSLRTLGLKGIRQTVVREDNAQNRGLINVVRHLVTVEEV 59 >gi|302524011|ref|ZP_07276353.1| ribosomal protein L30 [Streptomyces sp. AA4] gi|302432906|gb|EFL04722.1| ribosomal protein L30 [Streptomyces sp. AA4] Length=61 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 40/60 (67%), Positives = 46/60 (77%), Gaps = 0/60 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M+QLK+TQV+S IG + RESLRTLGLR+IR SV+RED RGLI VRHLVEVE Q Sbjct 1 MAQLKVTQVKSKIGTKHAHRESLRTLGLRKIRQSVVREDTPQVRGLIHTVRHLVEVEEVQ 60 >gi|256380580|ref|YP_003104240.1| 50S ribosomal protein L30 [Actinosynnema mirum DSM 43827] gi|255924883|gb|ACU40394.1| ribosomal protein L30 [Actinosynnema mirum DSM 43827] Length=61 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/61 (64%), Positives = 47/61 (78%), Gaps = 0/61 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M+QLK+TQV+STIG + RES+RTLGLR+IR SV+RED RGLI VRHLV VE Q Sbjct 1 MAQLKVTQVKSTIGTKHNHRESMRTLGLRKIRQSVVREDTPQVRGLIHAVRHLVVVEEVQ 60 Query 61 T 61 + Sbjct 61 S 61 >gi|300782626|ref|YP_003762917.1| 50S ribosomal protein L30 [Amycolatopsis mediterranei U32] gi|299792140|gb|ADJ42515.1| large subunit ribosomal protein L30 [Amycolatopsis mediterranei U32] gi|340523997|gb|AEK39202.1| 50S ribosomal protein L30 [Amycolatopsis mediterranei S699] Length=61 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/60 (65%), Positives = 46/60 (77%), Gaps = 0/60 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M+QLK+TQV+S IG + RESLRTLGLR+IR SV+R+D RGLI VRHLVEVE Q Sbjct 1 MAQLKVTQVKSKIGTKHAHRESLRTLGLRKIRQSVVRDDTPQVRGLIHTVRHLVEVEEVQ 60 >gi|108798006|ref|YP_638203.1| 50S ribosomal protein L30 [Mycobacterium sp. MCS] gi|119867102|ref|YP_937054.1| 50S ribosomal protein L30 [Mycobacterium sp. KMS] gi|123369672|sp|Q1BD87.1|RL30_MYCSS RecName: Full=50S ribosomal protein L30 gi|205829577|sp|A1UBQ6.1|RL30_MYCSK RecName: Full=50S ribosomal protein L30 gi|108768425|gb|ABG07147.1| LSU ribosomal protein L30P [Mycobacterium sp. MCS] gi|119693191|gb|ABL90264.1| LSU ribosomal protein L30P [Mycobacterium sp. KMS] Length=61 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/47 (81%), Positives = 42/47 (90%), Gaps = 0/47 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLI 47 M++LKI QVR TIGARW QRESLRTLGLR+IR SV+REDNA TRGLI Sbjct 3 MAELKIIQVRGTIGARWNQRESLRTLGLRKIRQSVVREDNAQTRGLI 49 >gi|296141079|ref|YP_003648322.1| 50S ribosomal protein L30 [Tsukamurella paurometabola DSM 20162] gi|296029213|gb|ADG79983.1| ribosomal protein L30 [Tsukamurella paurometabola DSM 20162] Length=59 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/57 (69%), Positives = 44/57 (78%), Gaps = 0/57 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 M+Q KITQVR TIG + QR+SLRTLGL+ IR SV+RED RGLI VV HLVEVE Sbjct 1 MAQFKITQVRGTIGTKQNQRDSLRTLGLKGIRKSVVREDTPQNRGLIQVVSHLVEVE 57 >gi|226305360|ref|YP_002765318.1| 50S ribosomal protein L30 [Rhodococcus erythropolis PR4] gi|229489394|ref|ZP_04383257.1| ribosomal protein L30 [Rhodococcus erythropolis SK121] gi|259646987|sp|C0ZW44.1|RL30_RHOE4 RecName: Full=50S ribosomal protein L30 gi|226184475|dbj|BAH32579.1| 50S ribosomal protein L30 [Rhodococcus erythropolis PR4] gi|229323491|gb|EEN89249.1| ribosomal protein L30 [Rhodococcus erythropolis SK121] Length=59 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/59 (62%), Positives = 46/59 (78%), Gaps = 0/59 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPA 59 M+ LK+TQ++S IG + Q++SLRTLGL+ IR +V+REDNA RGLI VVRHLV VE Sbjct 1 MADLKVTQIKSIIGTKQNQKDSLRTLGLKGIRQTVVREDNAQNRGLINVVRHLVTVEEV 59 >gi|325068049|ref|ZP_08126722.1| 50S ribosomal protein L30 [Actinomyces oris K20] gi|326773982|ref|ZP_08233264.1| ribosomal protein L30 [Actinomyces viscosus C505] gi|343521551|ref|ZP_08758517.1| ribosomal protein L30 [Actinomyces sp. oral taxon 175 str. F0384] gi|326636121|gb|EGE37025.1| ribosomal protein L30 [Actinomyces viscosus C505] gi|343400960|gb|EGV13466.1| ribosomal protein L30 [Actinomyces sp. oral taxon 175 str. F0384] Length=69 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/55 (70%), Positives = 45/55 (82%), Gaps = 0/55 (0%) Query 3 QLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 QLK+TQVRS IG +QRESL+TLGLR+IR SV+RED+ + RGLIA V HLV VE Sbjct 13 QLKVTQVRSGIGGTHRQRESLKTLGLRKIRQSVVREDSPSVRGLIATVHHLVTVE 67 >gi|320533209|ref|ZP_08033924.1| ribosomal protein L30 [Actinomyces sp. oral taxon 171 str. F0337] gi|320134573|gb|EFW26806.1| ribosomal protein L30 [Actinomyces sp. oral taxon 171 str. F0337] Length=68 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/55 (70%), Positives = 45/55 (82%), Gaps = 0/55 (0%) Query 3 QLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 QLK+TQVRS IG +QRESL+TLGLR+IR SV+RED+ + RGLIA V HLV VE Sbjct 12 QLKVTQVRSGIGGTHRQRESLKTLGLRKIRQSVVREDSPSVRGLIATVHHLVTVE 66 >gi|227497199|ref|ZP_03927447.1| ribosomal protein L30 [Actinomyces urogenitalis DSM 15434] gi|226833330|gb|EEH65713.1| ribosomal protein L30 [Actinomyces urogenitalis DSM 15434] Length=65 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/57 (67%), Positives = 46/57 (81%), Gaps = 0/57 (0%) Query 3 QLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPA 59 QLKITQVRS IG +QRE+L++LGLR+IR SV+REDN + RG+IA V HLV VE A Sbjct 9 QLKITQVRSGIGGTRRQRETLQSLGLRKIRQSVVREDNPSVRGMIATVAHLVTVEEA 65 >gi|329945747|ref|ZP_08293434.1| ribosomal protein L30 [Actinomyces sp. oral taxon 170 str. F0386] gi|328528195|gb|EGF55173.1| ribosomal protein L30 [Actinomyces sp. oral taxon 170 str. F0386] Length=68 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/55 (68%), Positives = 44/55 (80%), Gaps = 0/55 (0%) Query 3 QLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 QLK+TQ+RS IG +QRESL+TLGLR+IR SV+RED + RGLIA V HLV VE Sbjct 12 QLKVTQIRSGIGGTHRQRESLKTLGLRKIRQSVVREDTPSVRGLIATVHHLVTVE 66 >gi|262203557|ref|YP_003274765.1| 50S ribosomal protein L30 [Gordonia bronchialis DSM 43247] gi|262086904|gb|ACY22872.1| ribosomal protein L30 [Gordonia bronchialis DSM 43247] Length=60 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/60 (64%), Positives = 45/60 (75%), Gaps = 0/60 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M++LKITQV+ TIG + QR+SLRTLGL+ IR SV RED RGLI VVRHLV VE + Sbjct 1 MAELKITQVKGTIGTKKNQRDSLRTLGLKGIRKSVTREDTPINRGLINVVRHLVTVEEVK 60 >gi|340359395|ref|ZP_08681881.1| 50S ribosomal protein L30 [Actinomyces sp. oral taxon 448 str. F0400] gi|339884716|gb|EGQ74484.1| 50S ribosomal protein L30 [Actinomyces sp. oral taxon 448 str. F0400] Length=70 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/56 (65%), Positives = 47/56 (84%), Gaps = 0/56 (0%) Query 4 LKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPA 59 +++TQVRS+IG +QRE+LR+LGLRRIR SV+RED+A+ RG+IA V HLV VE A Sbjct 15 IRVTQVRSSIGGTRRQRETLRSLGLRRIRQSVVREDSASVRGMIATVSHLVTVEEA 70 >gi|257054488|ref|YP_003132320.1| 50S ribosomal protein L30P [Saccharomonospora viridis DSM 43017] gi|256584360|gb|ACU95493.1| LSU ribosomal protein L30P [Saccharomonospora viridis DSM 43017] Length=60 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/57 (67%), Positives = 43/57 (76%), Gaps = 0/57 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 M+QLKITQ RSTIG + R SLRTLGLR+IR SV+RED RGL+ VRHLV VE Sbjct 1 MAQLKITQTRSTIGTKQAHRASLRTLGLRKIRQSVVREDTPQVRGLLHAVRHLVTVE 57 >gi|326383216|ref|ZP_08204904.1| 50S ribosomal protein L30 [Gordonia neofelifaecis NRRL B-59395] gi|326197966|gb|EGD55152.1| 50S ribosomal protein L30 [Gordonia neofelifaecis NRRL B-59395] Length=59 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 36/57 (64%), Positives = 44/57 (78%), Gaps = 0/57 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 M++LKITQ++ TIG + QR+SLRTLGL+ IR +V RED RGLI VVRHLV VE Sbjct 1 MAELKITQIKGTIGTKKNQRDSLRTLGLKGIRQTVTREDTPINRGLINVVRHLVTVE 57 >gi|237786351|ref|YP_002907056.1| 50S ribosomal protein L30 [Corynebacterium kroppenstedtii DSM 44385] gi|259646820|sp|C4LL08.1|RL30_CORK4 RecName: Full=50S ribosomal protein L30 gi|237759263|gb|ACR18513.1| 50S ribosomal protein L30 [Corynebacterium kroppenstedtii DSM 44385] Length=61 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/54 (63%), Positives = 44/54 (82%), Gaps = 0/54 (0%) Query 4 LKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 LKITQV+ T+G R KQ+++LR+LGL+RIRHSV++ D RG+I VVRHLV VE Sbjct 3 LKITQVKGTVGTRKKQKDNLRSLGLKRIRHSVVQPDTPQVRGMINVVRHLVTVE 56 >gi|324999238|ref|ZP_08120350.1| 50S ribosomal protein L30 [Pseudonocardia sp. P1] Length=61 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/60 (62%), Positives = 45/60 (75%), Gaps = 0/60 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M+ LKITQV+S IG + QR+SLR+LGLR+IR SV R D+ TRG + VVRHLV VE Q Sbjct 1 MATLKITQVKSRIGTKKNQRDSLRSLGLRKIRQSVERPDDPQTRGYVHVVRHLVTVEEVQ 60 >gi|343927715|ref|ZP_08767183.1| 50S ribosomal protein L30 [Gordonia alkanivorans NBRC 16433] gi|343762356|dbj|GAA14109.1| 50S ribosomal protein L30 [Gordonia alkanivorans NBRC 16433] Length=59 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/57 (64%), Positives = 43/57 (76%), Gaps = 0/57 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 M++LKITQV+ TIG + QR+SLRTLGL+ IR +V RED RGLI VRHLV VE Sbjct 1 MAELKITQVKGTIGTKKNQRDSLRTLGLKGIRQTVTREDTPINRGLINAVRHLVTVE 57 >gi|213964848|ref|ZP_03393047.1| ribosomal protein L30 [Corynebacterium amycolatum SK46] gi|213952384|gb|EEB63767.1| ribosomal protein L30 [Corynebacterium amycolatum SK46] Length=61 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/54 (65%), Positives = 41/54 (76%), Gaps = 0/54 (0%) Query 4 LKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 LKITQVR T G + Q++SLRTLGL+RI S +R D A RGL+ VVRHLVEVE Sbjct 3 LKITQVRGTAGTKQNQKDSLRTLGLKRINDSAVRPDTPAVRGLVNVVRHLVEVE 56 >gi|260579239|ref|ZP_05847125.1| conserved domain protein [Corynebacterium jeikeium ATCC 43734] gi|258602628|gb|EEW15919.1| conserved domain protein [Corynebacterium jeikeium ATCC 43734] Length=61 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 33/54 (62%), Positives = 43/54 (80%), Gaps = 0/54 (0%) Query 4 LKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 LKITQV+ +G + KQR+S+R+LGL+RI +V+REDN RG I VVRH+VEVE Sbjct 3 LKITQVKGLVGTKPKQRDSMRSLGLKRIGQTVVREDNPIVRGQINVVRHMVEVE 56 >gi|284992856|ref|YP_003411410.1| 50S ribosomal protein L30 [Geodermatophilus obscurus DSM 43160] gi|284066101|gb|ADB77039.1| ribosomal protein L30 [Geodermatophilus obscurus DSM 43160] Length=60 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/57 (55%), Positives = 44/57 (78%), Gaps = 0/57 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 M+QLK+TQ+RS IG + QR++LR+LGL+R+ SV++ED RG++A V HLV VE Sbjct 1 MAQLKVTQIRSAIGTKPNQRQTLRSLGLKRVNDSVVQEDRPEIRGMVATVPHLVTVE 57 >gi|19551778|ref|NP_599780.1| 50S ribosomal protein L30 [Corynebacterium glutamicum ATCC 13032] gi|62389433|ref|YP_224835.1| 50S ribosomal protein L30 [Corynebacterium glutamicum ATCC 13032] gi|81761452|sp|Q8NSX3.1|RL30_CORGL RecName: Full=50S ribosomal protein L30 gi|21323307|dbj|BAB97935.1| Ribosomal protein L30/L7E [Corynebacterium glutamicum ATCC 13032] gi|41324767|emb|CAF19249.1| 50S RIBOSOMAL PROTEIN L30 [Corynebacterium glutamicum ATCC 13032] Length=61 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/54 (60%), Positives = 42/54 (78%), Gaps = 0/54 (0%) Query 4 LKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 LKITQ++ T+G + K RE+LR+LGL+RIRH+VIR D RG+I VRHL+ VE Sbjct 3 LKITQIKGTVGTKPKHRENLRSLGLKRIRHTVIRPDTPEVRGMILAVRHLIVVE 56 >gi|134103246|ref|YP_001108907.1| 50S ribosomal protein L30 [Saccharopolyspora erythraea NRRL 2338] gi|291007962|ref|ZP_06565935.1| 50S ribosomal protein L30 [Saccharopolyspora erythraea NRRL 2338] gi|166230185|sp|A4FPK7.1|RL30_SACEN RecName: Full=50S ribosomal protein L30 gi|133915869|emb|CAM05982.1| 50S ribosomal protein L30 [Saccharopolyspora erythraea NRRL 2338] Length=60 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/57 (58%), Positives = 42/57 (74%), Gaps = 0/57 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 M QLKITQ + +GA+ Q++S+RTLGLR+IR SV+R D RGL+ VV HLV VE Sbjct 1 MGQLKITQHKGLVGAKQNQKDSMRTLGLRKIRQSVVRPDTPDVRGLVNVVHHLVTVE 57 >gi|25027109|ref|NP_737163.1| 50S ribosomal protein L30 [Corynebacterium efficiens YS-314] gi|81750171|sp|Q8FS51.1|RL30_COREF RecName: Full=50S ribosomal protein L30 gi|23492389|dbj|BAC17363.1| putative 50S ribosomal protein L30 [Corynebacterium efficiens YS-314] Length=61 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/54 (60%), Positives = 42/54 (78%), Gaps = 0/54 (0%) Query 4 LKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 LKITQV+ TIG + K R++LR+LGL+RIRHSV+R D RG++ VRHL+ VE Sbjct 3 LKITQVKGTIGTKPKHRDNLRSLGLKRIRHSVVRPDTPEVRGMVQAVRHLIVVE 56 >gi|256831845|ref|YP_003160572.1| 50S ribosomal protein L30 [Jonesia denitrificans DSM 20603] gi|256685376|gb|ACV08269.1| ribosomal protein L30 [Jonesia denitrificans DSM 20603] Length=60 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/57 (58%), Positives = 42/57 (74%), Gaps = 0/57 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 M+ LK+TQV+S IG + QR++LRTLGL++I S +RED RGLIA V HLV VE Sbjct 1 MANLKVTQVKSAIGGKQNQRDTLRTLGLKKIGQSTVREDRPEVRGLIATVAHLVTVE 57 >gi|172040032|ref|YP_001799746.1| 50S ribosomal protein L30 [Corynebacterium urealyticum DSM 7109] gi|226703065|sp|B1VEX3.1|RL30_CORU7 RecName: Full=50S ribosomal protein L30 gi|171851336|emb|CAQ04312.1| 50S ribosomal protein L30 [Corynebacterium urealyticum DSM 7109] Length=61 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/56 (58%), Positives = 43/56 (77%), Gaps = 0/56 (0%) Query 4 LKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPA 59 LKI Q++ T+G + QR++LR+LGL+RI VIREDN+ TRG++ VRHLVEVE Sbjct 3 LKIRQIKGTVGRKQNQRDTLRSLGLKRIGQEVIREDNSVTRGMVHTVRHLVEVEEV 58 >gi|261338261|ref|ZP_05966145.1| ribosomal protein L30 [Bifidobacterium gallicum DSM 20093] gi|270276916|gb|EFA22770.1| ribosomal protein L30 [Bifidobacterium gallicum DSM 20093] Length=60 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/59 (62%), Positives = 43/59 (73%), Gaps = 0/59 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPA 59 M++LKIT V GA KQR +++TL LR+I S IREDN+ TRGLI VVRHLV VE A Sbjct 1 MAKLKITLVHGVCGANPKQRATVQTLALRKIGQSTIREDNSQTRGLIQVVRHLVTVEEA 59 >gi|288917248|ref|ZP_06411617.1| ribosomal protein L30 [Frankia sp. EUN1f] gi|288351439|gb|EFC85647.1| ribosomal protein L30 [Frankia sp. EUN1f] Length=61 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/61 (58%), Positives = 43/61 (71%), Gaps = 0/61 (0%) Query 1 MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60 M++L+ITQ+RS IG QRE+LRTLGLRRI S +RED RG+IA V HLV VE Sbjct 1 MAKLRITQIRSEIGGTRNQRETLRTLGLRRINGSTVREDRPEVRGMIATVTHLVRVEEVD 60 Query 61 T 61 + Sbjct 61 S 61 >gi|68536883|ref|YP_251588.1| 50S ribosomal protein L30 [Corynebacterium jeikeium K411] gi|123650243|sp|Q4JT87.1|RL30_CORJK RecName: Full=50S ribosomal protein L30 gi|68264482|emb|CAI37970.1| 50S ribosomal protein L30 [Corynebacterium jeikeium K411] Length=61 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/54 (60%), Positives = 42/54 (78%), Gaps = 0/54 (0%) Query 4 LKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 LKITQV+ +G + KQR+S+R+LGL+RI +V+REDN RG I VRH+VEVE Sbjct 3 LKITQVKGLVGTKPKQRDSMRSLGLKRIGQTVVREDNPIVRGQINTVRHMVEVE 56 >gi|145294693|ref|YP_001137514.1| 50S ribosomal protein L30 [Corynebacterium glutamicum R] gi|166229207|sp|A4QBL5.1|RL30_CORGB RecName: Full=50S ribosomal protein L30 gi|140844613|dbj|BAF53612.1| hypothetical protein [Corynebacterium glutamicum R] gi|344045855|gb|EGV41524.1| 50S ribosomal protein L30 [Corynebacterium glutamicum S9114] Length=61 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/54 (58%), Positives = 42/54 (78%), Gaps = 0/54 (0%) Query 4 LKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVE 57 LKITQ++ T+G + K R++LR+LGL+RIRH+VIR D RG+I VRHL+ VE Sbjct 3 LKITQIKGTVGTKPKHRDNLRSLGLKRIRHTVIRPDTPEVRGMILAVRHLIVVE 56 Lambda K H 0.320 0.132 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130377649416 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40