BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0739

Length=268
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607879|ref|NP_215253.1|  hypothetical protein Rv0739 [Mycoba...   548    3e-154
gi|148821944|ref|YP_001286698.1|  hypothetical protein TBFG_10753...   546    1e-153
gi|289756827|ref|ZP_06516205.1|  conserved hypothetical protein [...   540    7e-152
gi|289568686|ref|ZP_06448913.1|  conserved hypothetical protein [...   540    9e-152
gi|31791925|ref|NP_854418.1|  hypothetical protein Mb0760 [Mycoba...   538    4e-151
gi|289442140|ref|ZP_06431884.1|  conserved hypothetical protein [...   531    3e-149
gi|333990938|ref|YP_004523552.1|  hypothetical protein JDM601_229...  90.9    2e-16 
gi|333989221|ref|YP_004521835.1|  hypothetical protein JDM601_058...  87.8    2e-15 
gi|118615957|ref|YP_904289.1|  hypothetical protein MUL_0043 [Myc...  67.8    1e-09 
gi|296167100|ref|ZP_06849510.1|  conserved hypothetical protein [...  67.8    2e-09 
gi|118465006|ref|YP_879343.1|  hypothetical protein MAV_0043 [Myc...  66.6    4e-09 
gi|183980079|ref|YP_001848370.1|  hypothetical protein MMAR_0044 ...  66.2    4e-09 
gi|342860247|ref|ZP_08716899.1|  hypothetical protein MCOL_15260 ...  66.2    5e-09 
gi|333988699|ref|YP_004521313.1|  hypothetical protein JDM601_005...  65.5    8e-09 
gi|254773088|ref|ZP_05214604.1|  hypothetical protein MaviaA2_001...  65.5    9e-09 
gi|333992654|ref|YP_004525268.1|  hypothetical protein JDM601_401...  64.3    2e-08 
gi|336459448|gb|EGO38390.1|  Biofilm regulator BssS [Mycobacteriu...  63.9    2e-08 
gi|41406135|ref|NP_958971.1|  hypothetical protein MAP0037 [Mycob...  60.8    2e-07 
gi|240172399|ref|ZP_04751058.1|  hypothetical protein MkanA1_2399...  59.7    5e-07 
gi|340625058|ref|YP_004743510.1|  hypothetical protein MCAN_00241...  58.9    8e-07 
gi|15607167|ref|NP_214539.1|  hypothetical protein Rv0025 [Mycoba...  58.9    8e-07 
gi|333988681|ref|YP_004521295.1|  hypothetical protein JDM601_004...  57.0    3e-06 
gi|289764140|ref|ZP_06523518.1|  conserved hypothetical protein [...  56.2    5e-06 
gi|254819083|ref|ZP_05224084.1|  hypothetical protein MintA_04108...  55.8    7e-06 
gi|289748489|ref|ZP_06507867.1|  conserved hypothetical protein [...  55.1    1e-05 
gi|31791202|ref|NP_853695.1|  hypothetical protein Mb0026 [Mycoba...  54.7    1e-05 
gi|183980080|ref|YP_001848371.1|  hypothetical protein MMAR_0045 ...  51.6    1e-04 
gi|269793650|ref|YP_003313105.1|  hypothetical protein Sked_03030...  50.8    2e-04 
gi|240172400|ref|ZP_04751059.1|  hypothetical protein MkanA1_2399...  50.4    3e-04 
gi|254819082|ref|ZP_05224083.1|  hypothetical protein MintA_04103...  49.7    5e-04 
gi|254773089|ref|ZP_05214605.1|  hypothetical protein MaviaA2_001...  49.3    7e-04 
gi|118462713|ref|YP_879344.1|  hypothetical protein MAV_0044 [Myc...  48.9    7e-04 
gi|41406136|ref|NP_958972.1|  hypothetical protein MAP0038 [Mycob...  48.9    8e-04 
gi|253796941|ref|YP_003029942.1|  hypothetical protein TBMG_00026...  48.5    0.001 
gi|289764141|ref|ZP_06523519.1|  conserved hypothetical protein [...  48.1    0.001 
gi|15607168|ref|NP_214540.1|  hypothetical protein Rv0026 [Mycoba...  48.1    0.001 
gi|342860246|ref|ZP_08716898.1|  hypothetical protein MCOL_15255 ...  48.1    0.001 
gi|254366485|ref|ZP_04982529.1|  conserved hypothetical protein [...  48.1    0.001 
gi|15839400|ref|NP_334437.1|  hypothetical protein MT0029 [Mycoba...  48.1    0.001 
gi|31791203|ref|NP_853696.1|  hypothetical protein Mb0027 [Mycoba...  48.1    0.001 
gi|339630109|ref|YP_004721751.1|  hypothetical protein MAF_00260 ...  48.1    0.001 
gi|289445551|ref|ZP_06435295.1|  conserved hypothetical protein [...  48.1    0.001 
gi|289441393|ref|ZP_06431137.1|  conserved hypothetical protein [...  48.1    0.001 
gi|340625059|ref|YP_004743511.1|  hypothetical protein MCAN_00251...  47.8    0.002 
gi|15839399|ref|NP_334436.1|  hypothetical protein MT0028 [Mycoba...  47.0    0.003 
gi|296167099|ref|ZP_06849509.1|  conserved hypothetical protein [...  46.6    0.004 
gi|118615958|ref|YP_904290.1|  hypothetical protein MUL_0044 [Myc...  46.2    0.005 
gi|169245942|gb|ACA50963.1|  conserved hypothetical protein [Myco...  42.0    0.11  
gi|209418107|ref|YP_002274136.1|  hypothetical protein MULP_101 [...  42.0    0.11  
gi|238918983|ref|YP_002932497.1|  NADH oxidase [Edwardsiella icta...  40.0    0.39  


>gi|15607879|ref|NP_215253.1| hypothetical protein Rv0739 [Mycobacterium tuberculosis H37Rv]
 gi|15840148|ref|NP_335185.1| hypothetical protein MT0764 [Mycobacterium tuberculosis CDC1551]
 gi|148660515|ref|YP_001282038.1| hypothetical protein MRA_0748 [Mycobacterium tuberculosis H37Ra]
 18 more sequence titles
 gi|167968300|ref|ZP_02550577.1| hypothetical protein MtubH3_09824 [Mycobacterium tuberculosis 
H37Ra]
 gi|253797683|ref|YP_003030684.1| hypothetical protein TBMG_00753 [Mycobacterium tuberculosis KZN 
1435]
 gi|254231057|ref|ZP_04924384.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254549703|ref|ZP_05140150.1| hypothetical protein Mtube_04440 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289760867|ref|ZP_06520245.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|297633241|ref|ZP_06951021.1| hypothetical protein MtubK4_03915 [Mycobacterium tuberculosis 
KZN 4207]
 gi|308379853|ref|ZP_07487855.2| hypothetical protein TMKG_04027 [Mycobacterium tuberculosis SUMu011]
 gi|313657548|ref|ZP_07814428.1| hypothetical protein MtubKV_03960 [Mycobacterium tuberculosis 
KZN V2475]
 gi|14195432|sp|O53802.1|Y739_MYCTU RecName: Full=Uncharacterized protein Rv0739/MT0764
 gi|2911013|emb|CAA17506.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13880300|gb|AAK44999.1| hypothetical protein MT0764 [Mycobacterium tuberculosis CDC1551]
 gi|124600116|gb|EAY59126.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|148504667|gb|ABQ72476.1| hypothetical protein MRA_0748 [Mycobacterium tuberculosis H37Ra]
 gi|253319186|gb|ACT23789.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289708373|gb|EFD72389.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|308363477|gb|EFP52328.1| hypothetical protein TMKG_04027 [Mycobacterium tuberculosis SUMu011]
 gi|328457463|gb|AEB02886.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|344218564|gb|AEM99194.1| hypothetical protein MTCTRI2_0755 [Mycobacterium tuberculosis 
CTRI-2]
Length=268

 Score =  548 bits (1412),  Expect = 3e-154, Method: Compositional matrix adjust.
 Identities = 267/268 (99%), Positives = 268/268 (100%), Gaps = 0/268 (0%)

Query  1    LVLTRRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRA  60
            +VLTRRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRA
Sbjct  1    MVLTRRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRA  60

Query  61   LGLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEP  120
            LGLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEP
Sbjct  61   LGLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEP  120

Query  121  PPDPVPFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGL  180
            PPDPVPFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGL
Sbjct  121  PPDPVPFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGL  180

Query  181  LHIQAKHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSL  240
            LHIQAKHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSL
Sbjct  181  LHIQAKHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSL  240

Query  241  PDGRYVFTTRVIISARDGKIITAFPQTT  268
            PDGRYVFTTRVIISARDGKIITAFPQTT
Sbjct  241  PDGRYVFTTRVIISARDGKIITAFPQTT  268


>gi|148821944|ref|YP_001286698.1| hypothetical protein TBFG_10753 [Mycobacterium tuberculosis F11]
 gi|254363685|ref|ZP_04979731.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289552996|ref|ZP_06442206.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 25 more sequence titles
 gi|297730221|ref|ZP_06959339.1| hypothetical protein MtubKR_03970 [Mycobacterium tuberculosis 
KZN R506]
 gi|306783394|ref|ZP_07421716.1| hypothetical protein TMCG_03553 [Mycobacterium tuberculosis SUMu003]
 gi|306794532|ref|ZP_07432834.1| hypothetical protein TMEG_02115 [Mycobacterium tuberculosis SUMu005]
 gi|306796497|ref|ZP_07434799.1| hypothetical protein TMFG_03412 [Mycobacterium tuberculosis SUMu006]
 gi|306802357|ref|ZP_07439025.1| hypothetical protein TMHG_03768 [Mycobacterium tuberculosis SUMu008]
 gi|306966764|ref|ZP_07479425.1| hypothetical protein TMIG_01648 [Mycobacterium tuberculosis SUMu009]
 gi|308231624|ref|ZP_07413188.2| hypothetical protein TMAG_02623 [Mycobacterium tuberculosis SUMu001]
 gi|308369973|ref|ZP_07419753.2| hypothetical protein TMBG_03346 [Mycobacterium tuberculosis SUMu002]
 gi|308375240|ref|ZP_07443234.2| hypothetical protein TMGG_03762 [Mycobacterium tuberculosis SUMu007]
 gi|308378706|ref|ZP_07483616.2| hypothetical protein TMJG_02487 [Mycobacterium tuberculosis SUMu010]
 gi|308396521|ref|ZP_07492359.2| hypothetical protein TMLG_03233 [Mycobacterium tuberculosis SUMu012]
 gi|134149199|gb|EBA41244.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148720471|gb|ABR05096.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|289437628|gb|EFD20121.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|308216740|gb|EFO76139.1| hypothetical protein TMAG_02623 [Mycobacterium tuberculosis SUMu001]
 gi|308325717|gb|EFP14568.1| hypothetical protein TMBG_03346 [Mycobacterium tuberculosis SUMu002]
 gi|308331885|gb|EFP20736.1| hypothetical protein TMCG_03553 [Mycobacterium tuberculosis SUMu003]
 gi|308337129|gb|EFP25980.1| hypothetical protein TMEG_02115 [Mycobacterium tuberculosis SUMu005]
 gi|308343154|gb|EFP32005.1| hypothetical protein TMFG_03412 [Mycobacterium tuberculosis SUMu006]
 gi|308347042|gb|EFP35893.1| hypothetical protein TMGG_03762 [Mycobacterium tuberculosis SUMu007]
 gi|308350925|gb|EFP39776.1| hypothetical protein TMHG_03768 [Mycobacterium tuberculosis SUMu008]
 gi|308355615|gb|EFP44466.1| hypothetical protein TMIG_01648 [Mycobacterium tuberculosis SUMu009]
 gi|308359574|gb|EFP48425.1| hypothetical protein TMJG_02487 [Mycobacterium tuberculosis SUMu010]
 gi|308367113|gb|EFP55964.1| hypothetical protein TMLG_03233 [Mycobacterium tuberculosis SUMu012]
 gi|323720866|gb|EGB29933.1| hypothetical protein TMMG_03446 [Mycobacterium tuberculosis CDC1551A]
Length=267

 Score =  546 bits (1407),  Expect = 1e-153, Method: Compositional matrix adjust.
 Identities = 266/267 (99%), Positives = 267/267 (100%), Gaps = 0/267 (0%)

Query  2    VLTRRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRAL  61
            +LTRRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRAL
Sbjct  1    MLTRRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRAL  60

Query  62   GLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPP  121
            GLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPP
Sbjct  61   GLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPP  120

Query  122  PDPVPFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLL  181
            PDPVPFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLL
Sbjct  121  PDPVPFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLL  180

Query  182  HIQAKHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLP  241
            HIQAKHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLP
Sbjct  181  HIQAKHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLP  240

Query  242  DGRYVFTTRVIISARDGKIITAFPQTT  268
            DGRYVFTTRVIISARDGKIITAFPQTT
Sbjct  241  DGRYVFTTRVIISARDGKIITAFPQTT  267


>gi|289756827|ref|ZP_06516205.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294996224|ref|ZP_06801915.1| hypothetical protein Mtub2_17396 [Mycobacterium tuberculosis 
210]
 gi|289712391|gb|EFD76403.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|339293764|gb|AEJ45875.1| hypothetical protein CCDC5079_0685 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297403|gb|AEJ49513.1| hypothetical protein CCDC5180_0676 [Mycobacterium tuberculosis 
CCDC5180]
Length=287

 Score =  540 bits (1392),  Expect = 7e-152, Method: Compositional matrix adjust.
 Identities = 263/263 (100%), Positives = 263/263 (100%), Gaps = 0/263 (0%)

Query  6    RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  65
            RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT
Sbjct  25   RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  84

Query  66   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPV  125
            PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPV
Sbjct  85   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPV  144

Query  126  PFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQA  185
            PFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQA
Sbjct  145  PFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQA  204

Query  186  KHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRY  245
            KHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRY
Sbjct  205  KHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRY  264

Query  246  VFTTRVIISARDGKIITAFPQTT  268
            VFTTRVIISARDGKIITAFPQTT
Sbjct  265  VFTTRVIISARDGKIITAFPQTT  287


>gi|289568686|ref|ZP_06448913.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289744463|ref|ZP_06503841.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289749248|ref|ZP_06508626.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 7 more sequence titles
 gi|289752786|ref|ZP_06512164.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|298524230|ref|ZP_07011639.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|289542440|gb|EFD46088.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289684991|gb|EFD52479.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289689835|gb|EFD57264.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289693373|gb|EFD60802.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|298494024|gb|EFI29318.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=282

 Score =  540 bits (1391),  Expect = 9e-152, Method: Compositional matrix adjust.
 Identities = 263/263 (100%), Positives = 263/263 (100%), Gaps = 0/263 (0%)

Query  6    RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  65
            RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT
Sbjct  20   RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  79

Query  66   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPV  125
            PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPV
Sbjct  80   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPV  139

Query  126  PFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQA  185
            PFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQA
Sbjct  140  PFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQA  199

Query  186  KHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRY  245
            KHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRY
Sbjct  200  KHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRY  259

Query  246  VFTTRVIISARDGKIITAFPQTT  268
            VFTTRVIISARDGKIITAFPQTT
Sbjct  260  VFTTRVIISARDGKIITAFPQTT  282


>gi|31791925|ref|NP_854418.1| hypothetical protein Mb0760 [Mycobacterium bovis AF2122/97]
 gi|121636661|ref|YP_976884.1| hypothetical protein BCG_0789 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224989133|ref|YP_002643820.1| hypothetical protein JTY_0759 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31617512|emb|CAD93622.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492308|emb|CAL70775.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224772246|dbj|BAH25052.1| hypothetical protein JTY_0759 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341600677|emb|CCC63347.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=282

 Score =  538 bits (1385),  Expect = 4e-151, Method: Compositional matrix adjust.
 Identities = 262/263 (99%), Positives = 263/263 (100%), Gaps = 0/263 (0%)

Query  6    RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  65
            RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT
Sbjct  20   RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  79

Query  66   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPV  125
            PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPV
Sbjct  80   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPV  139

Query  126  PFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQA  185
            PFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQA
Sbjct  140  PFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQA  199

Query  186  KHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRY  245
            KHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRR+SLPDGRY
Sbjct  200  KHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRVSLPDGRY  259

Query  246  VFTTRVIISARDGKIITAFPQTT  268
            VFTTRVIISARDGKIITAFPQTT
Sbjct  260  VFTTRVIISARDGKIITAFPQTT  282


>gi|289442140|ref|ZP_06431884.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289446299|ref|ZP_06436043.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289573347|ref|ZP_06453574.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 6 more sequence titles
 gi|308371747|ref|ZP_07426086.2| hypothetical protein TMDG_02466 [Mycobacterium tuberculosis SUMu004]
 gi|289415059|gb|EFD12299.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289419257|gb|EFD16458.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289537778|gb|EFD42356.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|308335672|gb|EFP24523.1| hypothetical protein TMDG_02466 [Mycobacterium tuberculosis SUMu004]
 gi|326905039|gb|EGE51972.1| hypothetical protein TBPG_02966 [Mycobacterium tuberculosis W-148]
Length=259

 Score =  531 bits (1369),  Expect = 3e-149, Method: Compositional matrix adjust.
 Identities = 258/259 (99%), Positives = 259/259 (100%), Gaps = 0/259 (0%)

Query  10   VALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGA  69
            +ALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGA
Sbjct  1    MALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGA  60

Query  70   RNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPVPFPP  129
            RNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPVPFPP
Sbjct  61   RNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQEPPPDPVPFPP  120

Query  130  YQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQAKHGR  189
            YQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQAKHGR
Sbjct  121  YQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSVLYCGNDKYGLLHIQAKHGR  180

Query  190  QWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRYVFTT  249
            QWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRYVFTT
Sbjct  181  QWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDNDTFAVYRRMSLPDGRYVFTT  240

Query  250  RVIISARDGKIITAFPQTT  268
            RVIISARDGKIITAFPQTT
Sbjct  241  RVIISARDGKIITAFPQTT  259


>gi|333990938|ref|YP_004523552.1| hypothetical protein JDM601_2298 [Mycobacterium sp. JDM601]
 gi|333486906|gb|AEF36298.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=452

 Score = 90.9 bits (224),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 55/105 (53%), Positives = 65/105 (62%), Gaps = 0/105 (0%)

Query  4    TRRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGL  63
            T ++REV+L      +A TD  +   LR A D    GRRRL  IGAEI +A+  QRA   
Sbjct  11   TAQSREVSLIVRQQTAARTDDVLSTALRGAVDHAREGRRRLDTIGAEIRDALGDQRAPAS  70

Query  64   DTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSY  108
            DTPAG R F  FLA KA DI RV+A  AA+S+AG A LRSL S Y
Sbjct  71   DTPAGVRQFQLFLAAKARDIRRVVADVAADSRAGTALLRSLGSDY  115


>gi|333989221|ref|YP_004521835.1| hypothetical protein JDM601_0581 [Mycobacterium sp. JDM601]
 gi|333485189|gb|AEF34581.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=411

 Score = 87.8 bits (216),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/101 (50%), Positives = 61/101 (61%), Gaps = 0/101 (0%)

Query  12   LTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARN  71
            L   +  + + DRA V  LR A    + GRRRL  I AEI  A+A+Q+AL LDTPAGAR 
Sbjct  19   LATRLHTTTQLDRAFVATLRGAAQVALRGRRRLDGIEAEIRQALANQQALALDTPAGARQ  78

Query  72   FSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVG  112
            F +FL  K  DI RV+A T A+S A AA +RSL   Y   G
Sbjct  79   FQQFLTVKTRDIHRVIADTVADSHARAAAVRSLGGGYTVKG  119


>gi|118615957|ref|YP_904289.1| hypothetical protein MUL_0043 [Mycobacterium ulcerans Agy99]
 gi|118568067|gb|ABL02818.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=126

 Score = 67.8 bits (164),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 45/108 (42%), Positives = 62/108 (58%), Gaps = 1/108 (0%)

Query  6    RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  65
            RAR+  L +   V  E DRA+V  L +A+  +    RRL AIGAEI+ AVA Q +L LDT
Sbjct  19   RARQAELARQHDVLGEADRALVEALTRAHTVMRDSVRRLDAIGAEIDGAVAGQDSLALDT  78

Query  66   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSY-QAVG  112
            P GAR F  FL  K  +I  ++A      +  +A L +L + Y ++VG
Sbjct  79   PLGAREFQNFLLAKQREIATIVATAHELDRTKSAVLANLRAHYGESVG  126


>gi|296167100|ref|ZP_06849510.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897542|gb|EFG77138.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=110

 Score = 67.8 bits (164),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 42/103 (41%), Positives = 55/103 (54%), Gaps = 0/103 (0%)

Query  6    RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  65
            +AR+ AL    G  A+ DR +   L  A+  +  G RRL AI  +I++A  HQ  L +DT
Sbjct  2    QARQSALVGQQGTVADADRVLAEVLTSAHAEMREGARRLDAIADQIDHATVHQAGLAIDT  61

Query  66   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSY  108
            P GAR F RFL  K  +IT V+    A S+A  A L  L   Y
Sbjct  62   PMGAREFQRFLLAKQREITAVVDEARALSRAKKAVLEGLRDQY  104


>gi|118465006|ref|YP_879343.1| hypothetical protein MAV_0043 [Mycobacterium avium 104]
 gi|118166293|gb|ABK67190.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=120

 Score = 66.6 bits (161),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 41/104 (40%), Positives = 56/104 (54%), Gaps = 0/104 (0%)

Query  7    AREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTP  66
            AR  AL    G ++E+DR +   L  A+ +     RRL AI  +I+ AVAHQ  L +DTP
Sbjct  14   ARRSALADQHGAASESDRVLAEVLASAHAAAQESARRLDAIAEQIDRAVAHQADLAVDTP  73

Query  67   AGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
             GAR F +FL  K H+I  V+      S+A    L +L + Y A
Sbjct  74   LGAREFHKFLLAKQHEIASVITEAQELSRAKRVVLENLRAQYSA  117


>gi|183980079|ref|YP_001848370.1| hypothetical protein MMAR_0044 [Mycobacterium marinum M]
 gi|183173405|gb|ACC38515.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=126

 Score = 66.2 bits (160),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 43/103 (42%), Positives = 57/103 (56%), Gaps = 0/103 (0%)

Query  6    RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  65
            RAR+  L +   V  E DRA+   L +A+  +    RRL AIGAEI+ AVA Q +L LDT
Sbjct  19   RARQAELARQHDVLGEADRALAEALTRAHTVMRDSVRRLDAIGAEIDGAVAGQDSLALDT  78

Query  66   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSY  108
            P GAR F  FL  K  +I  ++A      +  +A L SL + Y
Sbjct  79   PLGAREFQNFLLAKQREIATIVATAHELDRTKSAVLASLRAHY  121


>gi|342860247|ref|ZP_08716899.1| hypothetical protein MCOL_15260 [Mycobacterium colombiense CECT 
3035]
 gi|342132625|gb|EGT85854.1| hypothetical protein MCOL_15260 [Mycobacterium colombiense CECT 
3035]
Length=121

 Score = 66.2 bits (160),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 41/104 (40%), Positives = 56/104 (54%), Gaps = 0/104 (0%)

Query  7    AREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTP  66
            AR  AL    G ++E DR +   L  A+++     RRL +I  +I++A  HQ  L LDTP
Sbjct  15   ARRSALASQHGTASEADRVLTDVLTSAHEAARESVRRLDSIAEQIDHATVHQADLALDTP  74

Query  67   AGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
             GAR F +FL  K  +I  V+A      QA  A L+SL + Y A
Sbjct  75   MGAREFQKFLMAKQREIASVVAEAREFGQAKRAVLQSLRAQYGA  118


>gi|333988699|ref|YP_004521313.1| hypothetical protein JDM601_0059 [Mycobacterium sp. JDM601]
 gi|333484667|gb|AEF34059.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=352

 Score = 65.5 bits (158),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 48/122 (40%), Positives = 67/122 (55%), Gaps = 11/122 (9%)

Query  12   LTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARN  71
            LT+ +  S E DR+    LR A+      R+RL A+ AEI  A A   AL  +TPAGAR 
Sbjct  15   LTRRLATSVELDRSFQEILRGAHQFNAQSRQRLDALEAEIRQAAAAWPAL--NTPAGARQ  72

Query  72   FSRFLATKAHDITRVLAATAAESQAGAARLRSLASSY--------QAVGFGPKPQEPPPD  123
            F  +L  K  +I +V+A  AA+SQ  AA++++L   Y        Q+V F P+   PP D
Sbjct  73   FQAYLTGKTREIHKVVADAAADSQQRAAQVQALTGRYPLRGDRTIQSVDF-PQQGPPPVD  131

Query  124  PV  125
            P+
Sbjct  132  PL  133


>gi|254773088|ref|ZP_05214604.1| hypothetical protein MaviaA2_00181 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=120

 Score = 65.5 bits (158),  Expect = 9e-09, Method: Compositional matrix adjust.
 Identities = 41/104 (40%), Positives = 55/104 (53%), Gaps = 0/104 (0%)

Query  7    AREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTP  66
            AR  AL    G ++E DR +   L  A+ +     RRL AI  +I+ AVAHQ  L +DTP
Sbjct  14   ARRSALADQHGAASEADRVLAEVLASAHAAAQESARRLDAIAEQIDRAVAHQADLAVDTP  73

Query  67   AGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
             GAR F +FL  K H+I  V+      S+A    L +L + Y A
Sbjct  74   LGAREFHKFLLAKQHEIASVVTEAQELSRAKRVVLENLRAQYSA  117


>gi|333992654|ref|YP_004525268.1| hypothetical protein JDM601_4014 [Mycobacterium sp. JDM601]
 gi|333488622|gb|AEF38014.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=439

 Score = 64.3 bits (155),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 42/109 (39%), Positives = 59/109 (55%), Gaps = 2/109 (1%)

Query  6    RAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDT  65
            RARE  L   +  SA  D      LR+A  +    R+RL A+ AEI  A A     GLDT
Sbjct  13   RARENKLVNRLAASAAADHDFEAILREAVRNNSASRQRLDAMAAEIRQAAATWP--GLDT  70

Query  66   PAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFG  114
            PAG+R F R+L  KA +I +++    A+S+  A  +R+L + Y+  G G
Sbjct  71   PAGSRQFQRYLTGKAREIHKIVNDAHADSEHRAGLVRTLTNRYKLGGDG  119


>gi|336459448|gb|EGO38390.1| Biofilm regulator BssS [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=120

 Score = 63.9 bits (154),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 40/104 (39%), Positives = 54/104 (52%), Gaps = 0/104 (0%)

Query  7    AREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTP  66
            AR  AL    G ++E DR +   L  A+ +     RRL AI  +I+ AVAHQ  L +DTP
Sbjct  14   ARRSALADQHGAASEADRVLAEVLASAHAAAQESARRLDAIAEQIDRAVAHQADLAIDTP  73

Query  67   AGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
             GAR F +FL  K H+I  V+       +A    L +L + Y A
Sbjct  74   LGAREFHKFLLAKQHEIASVVTEAQELGRAKRVVLENLRAQYSA  117


>gi|41406135|ref|NP_958971.1| hypothetical protein MAP0037 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41394483|gb|AAS02354.1| hypothetical protein MAP_0037 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=120

 Score = 60.8 bits (146),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 39/104 (38%), Positives = 53/104 (51%), Gaps = 0/104 (0%)

Query  7    AREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTP  66
            AR  AL    G ++E DR +   L  A+ +     RRL A   +I+ AVAHQ  L +DTP
Sbjct  14   ARRSALADQHGAASEADRVLAEVLASAHAAAQESARRLDASAEQIDRAVAHQADLAIDTP  73

Query  67   AGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
             GAR F +FL  K H+I  V+       +A    L +L + Y A
Sbjct  74   LGAREFHKFLLAKQHEIASVVTEAQELGRAKRVVLENLRAQYSA  117


>gi|240172399|ref|ZP_04751058.1| hypothetical protein MkanA1_23993 [Mycobacterium kansasii ATCC 
12478]
Length=120

 Score = 59.7 bits (143),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 34/82 (42%), Positives = 45/82 (55%), Gaps = 0/82 (0%)

Query  7   AREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTP  66
           AR+  L        E DR +   L  A+ ++    RRL AI A+IE AV+ Q  L +DTP
Sbjct  14  ARQAVLGSQYQAITEADRVLAEALASAHATMRESIRRLDAIAADIERAVSDQAELAVDTP  73

Query  67  AGARNFSRFLATKAHDITRVLA  88
            GAR F RFL  K  +IT ++A
Sbjct  74  LGAREFQRFLLDKQREITTIVA  95


>gi|340625058|ref|YP_004743510.1| hypothetical protein MCAN_00241 [Mycobacterium canettii CIPT 
140010059]
 gi|340003248|emb|CCC42365.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=120

 Score = 58.9 bits (141),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 40/108 (38%), Positives = 56/108 (52%), Gaps = 0/108 (0%)

Query  1    LVLTRRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRA  60
            LV   + R+  L +     AE DR +   L  A+ ++    RRL AI AE++ AV  Q  
Sbjct  8    LVAVIQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQ  67

Query  61   LGLDTPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSY  108
            L +DTP GAR F  FL  K  +I  V+AA     +A +A L+ L + Y
Sbjct  68   LAVDTPMGAREFQTFLVAKQREIVAVVAAAHELDRAKSAVLKRLRAQY  115


>gi|15607167|ref|NP_214539.1| hypothetical protein Rv0025 [Mycobacterium tuberculosis H37Rv]
 gi|148659785|ref|YP_001281308.1| hypothetical protein MRA_0028 [Mycobacterium tuberculosis H37Ra]
 gi|148821216|ref|YP_001285970.1| hypothetical protein TBFG_10025 [Mycobacterium tuberculosis F11]
 61 more sequence titles
 gi|167968157|ref|ZP_02550434.1| hypothetical protein MtubH3_09022 [Mycobacterium tuberculosis 
H37Ra]
 gi|253796940|ref|YP_003029941.1| hypothetical protein TBMG_00025 [Mycobacterium tuberculosis KZN 
1435]
 gi|254548957|ref|ZP_05139404.1| hypothetical protein Mtube_00570 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289441392|ref|ZP_06431136.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289445550|ref|ZP_06435294.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289552275|ref|ZP_06441485.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289567910|ref|ZP_06448137.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289572601|ref|ZP_06452828.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289747795|ref|ZP_06507173.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289756084|ref|ZP_06515462.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289760122|ref|ZP_06519500.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294995638|ref|ZP_06801329.1| hypothetical protein Mtub2_14312 [Mycobacterium tuberculosis 
210]
 gi|297632496|ref|ZP_06950276.1| hypothetical protein MtubK4_00140 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297729467|ref|ZP_06958585.1| hypothetical protein MtubKR_00150 [Mycobacterium tuberculosis 
KZN R506]
 gi|298527423|ref|ZP_07014832.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306778317|ref|ZP_07416654.1| hypothetical protein TMAG_00696 [Mycobacterium tuberculosis SUMu001]
 gi|306778846|ref|ZP_07417183.1| hypothetical protein TMBG_02490 [Mycobacterium tuberculosis SUMu002]
 gi|306782636|ref|ZP_07420958.1| hypothetical protein TMCG_03738 [Mycobacterium tuberculosis SUMu003]
 gi|306787002|ref|ZP_07425324.1| hypothetical protein TMDG_01909 [Mycobacterium tuberculosis SUMu004]
 gi|306791560|ref|ZP_07429862.1| hypothetical protein TMEG_00449 [Mycobacterium tuberculosis SUMu005]
 gi|306795623|ref|ZP_07433925.1| hypothetical protein TMFG_02188 [Mycobacterium tuberculosis SUMu006]
 gi|306801599|ref|ZP_07438267.1| hypothetical protein TMHG_03022 [Mycobacterium tuberculosis SUMu008]
 gi|306805806|ref|ZP_07442474.1| hypothetical protein TMGG_01496 [Mycobacterium tuberculosis SUMu007]
 gi|306970204|ref|ZP_07482865.1| hypothetical protein TMIG_00306 [Mycobacterium tuberculosis SUMu009]
 gi|306974437|ref|ZP_07487098.1| hypothetical protein TMJG_01206 [Mycobacterium tuberculosis SUMu010]
 gi|307082145|ref|ZP_07491315.1| hypothetical protein TMKG_01204 [Mycobacterium tuberculosis SUMu011]
 gi|307082485|ref|ZP_07491598.1| hypothetical protein TMLG_00757 [Mycobacterium tuberculosis SUMu012]
 gi|313656796|ref|ZP_07813676.1| hypothetical protein MtubKV_00150 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339630108|ref|YP_004721750.1| hypothetical protein MAF_00250 [Mycobacterium africanum GM041182]
 gi|14195333|sp|P71595.1|Y025_MYCTU RecName: Full=Uncharacterized protein Rv0025/MT0028
 gi|1552580|emb|CAB02445.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148503937|gb|ABQ71746.1| hypothetical protein MRA_0028 [Mycobacterium tuberculosis H37Ra]
 gi|148719743|gb|ABR04368.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253318443|gb|ACT23046.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289414311|gb|EFD11551.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289418508|gb|EFD15709.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289436907|gb|EFD19400.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289537032|gb|EFD41610.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289541663|gb|EFD45312.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289688323|gb|EFD55811.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289696671|gb|EFD64100.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289715686|gb|EFD79698.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497217|gb|EFI32511.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308213462|gb|EFO72861.1| hypothetical protein TMAG_00696 [Mycobacterium tuberculosis SUMu001]
 gi|308328179|gb|EFP17030.1| hypothetical protein TMBG_02490 [Mycobacterium tuberculosis SUMu002]
 gi|308332484|gb|EFP21335.1| hypothetical protein TMCG_03738 [Mycobacterium tuberculosis SUMu003]
 gi|308336296|gb|EFP25147.1| hypothetical protein TMDG_01909 [Mycobacterium tuberculosis SUMu004]
 gi|308339900|gb|EFP28751.1| hypothetical protein TMEG_00449 [Mycobacterium tuberculosis SUMu005]
 gi|308343915|gb|EFP32766.1| hypothetical protein TMFG_02188 [Mycobacterium tuberculosis SUMu006]
 gi|308347699|gb|EFP36550.1| hypothetical protein TMGG_01496 [Mycobacterium tuberculosis SUMu007]
 gi|308351616|gb|EFP40467.1| hypothetical protein TMHG_03022 [Mycobacterium tuberculosis SUMu008]
 gi|308352323|gb|EFP41174.1| hypothetical protein TMIG_00306 [Mycobacterium tuberculosis SUMu009]
 gi|308356223|gb|EFP45074.1| hypothetical protein TMJG_01206 [Mycobacterium tuberculosis SUMu010]
 gi|308360213|gb|EFP49064.1| hypothetical protein TMKG_01204 [Mycobacterium tuberculosis SUMu011]
 gi|308367775|gb|EFP56626.1| hypothetical protein TMLG_00757 [Mycobacterium tuberculosis SUMu012]
 gi|326905786|gb|EGE52719.1| hypothetical protein TBPG_03751 [Mycobacterium tuberculosis W-148]
 gi|328456731|gb|AEB02154.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339293103|gb|AEJ45214.1| hypothetical protein CCDC5079_0024 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339296752|gb|AEJ48862.1| hypothetical protein CCDC5180_0025 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339329464|emb|CCC25099.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|344217843|gb|AEM98473.1| hypothetical protein MTCTRI2_0028 [Mycobacterium tuberculosis 
CTRI-2]
Length=120

 Score = 58.9 bits (141),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 39/95 (42%), Positives = 52/95 (55%), Gaps = 1/95 (1%)

Query  14   QHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFS  73
            QH  V AE DR +   L  A+ ++    RRL AI AE++ AV  Q  L +DTP GAR F 
Sbjct  22   QHDAV-AEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQ  80

Query  74   RFLATKAHDITRVLAATAAESQAGAARLRSLASSY  108
             FL  K  +I  V+AA     +A +A L+ L + Y
Sbjct  81   TFLVAKQREIVAVVAAAHELDRAKSAVLKRLRAQY  115


>gi|333988681|ref|YP_004521295.1| hypothetical protein JDM601_0041 [Mycobacterium sp. JDM601]
 gi|333484649|gb|AEF34041.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=435

 Score = 57.0 bits (136),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 50/149 (34%), Positives = 66/149 (45%), Gaps = 9/149 (6%)

Query  2    VLTRRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRAL  61
            V   R  E AL Q +  +AE DR ++  LR A+ + + GRRRL  +  EI  A  H    
Sbjct  58   VRAMRTAESALAQQLSATAEFDRQIIAALRHAHKTTLEGRRRLDNVQTEIVGATQH---W  114

Query  62   GLDTPAGARNFSRFLATKAHDITRVLAA-----TAAESQAGAARLRSLASSYQAVGFGPK  116
             L T AGAR F RFL  K  +I  V+       T+ +    A      A + Q     P 
Sbjct  115  DLSTAAGAREFQRFLIVKLGEIIGVVEEANDDDTSKQELTAALTALYAAPAAQRDDPAPV  174

Query  117  PQEPPPDPVPFP-PYQPKVWAACRARGQD  144
             Q P PD  P P P  P +  A  +  +D
Sbjct  175  EQNPAPDGGPSPTPVAPSLAEAAPSVAED  203


>gi|289764140|ref|ZP_06523518.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289711646|gb|EFD75662.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=120

 Score = 56.2 bits (134),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 38/91 (42%), Positives = 50/91 (55%), Gaps = 1/91 (1%)

Query  14   QHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFS  73
            QH  V AE DR +   L  A+ ++    RRL AI AE++ AV  Q  L +DTP GAR F 
Sbjct  22   QHDAV-AEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQ  80

Query  74   RFLATKAHDITRVLAATAAESQAGAARLRSL  104
             FL  K  +I  V+AA     +A +A L+ L
Sbjct  81   TFLVAKQREIVAVVAAAHELDRAKSAVLKRL  111


>gi|254819083|ref|ZP_05224084.1| hypothetical protein MintA_04108 [Mycobacterium intracellulare 
ATCC 13950]
Length=120

 Score = 55.8 bits (133),  Expect = 7e-06, Method: Compositional matrix adjust.
 Identities = 37/102 (37%), Positives = 51/102 (50%), Gaps = 0/102 (0%)

Query  7    AREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTP  66
            AR   L    G  +E D  +   L  A+ +     RRL AI  +I++AV  Q  L +DTP
Sbjct  14   ARRSTLASQHGAVSEADLVLTDVLNTAHSAARESVRRLDAIAEQIDHAVVQQANLAVDTP  73

Query  67   AGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSY  108
             GAR F +FL  K  +I  V+A     +QA  A L +L + Y
Sbjct  74   MGAREFHKFLLDKQREIAAVVAGARELAQAKRAVLENLRAQY  115


>gi|289748489|ref|ZP_06507867.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689076|gb|EFD56505.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=107

 Score = 55.1 bits (131),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 34/76 (45%), Positives = 43/76 (57%), Gaps = 1/76 (1%)

Query  14  QHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFS  73
           QH  V AE DR +   L  A+ ++    RRL AI AE++ AV  Q  L +DTP GAR F 
Sbjct  22  QHDAV-AEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQ  80

Query  74  RFLATKAHDITRVLAA  89
            FL  K  +I  V+AA
Sbjct  81  TFLVAKQREIVAVVAA  96


>gi|31791202|ref|NP_853695.1| hypothetical protein Mb0026 [Mycobacterium bovis AF2122/97]
 gi|121635935|ref|YP_976158.1| hypothetical protein BCG_0056 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224988408|ref|YP_002643075.1| hypothetical protein JTY_0026 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31616787|emb|CAD92888.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121491582|emb|CAL70040.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224771521|dbj|BAH24327.1| hypothetical protein JTY_0026 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341599951|emb|CCC62619.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=120

 Score = 54.7 bits (130),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 51/95 (54%), Gaps = 1/95 (1%)

Query  14   QHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFS  73
            QH  V AE DR +   L  A+ ++    RRL AI AE++ AV  Q  L +DT  GAR F 
Sbjct  22   QHDAV-AEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTLMGAREFQ  80

Query  74   RFLATKAHDITRVLAATAAESQAGAARLRSLASSY  108
             FL  K  +I  V+AA     +A +A L+ L + Y
Sbjct  81   TFLVAKQREIVAVVAAAHELDRAKSAVLKRLRAQY  115


>gi|183980080|ref|YP_001848371.1| hypothetical protein MMAR_0045 [Mycobacterium marinum M]
 gi|183173406|gb|ACC38516.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=417

 Score = 51.6 bits (122),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 36/102 (36%), Positives = 52/102 (51%), Gaps = 2/102 (1%)

Query  9    EVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAG  68
            EVAL     +S++ D  V+  +  A+ + V G   L  +  E E AV  +    LDTPAG
Sbjct  25   EVALAHQNSMSSQLDLQVIAAILNAHLTAVDGSEALDELQQETEAAVRTRS--DLDTPAG  82

Query  69   ARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            AR+F RFL  K  DI  V+A  + +  + A  + +  S Y A
Sbjct  83   ARDFQRFLIGKLRDIREVVATASLDDTSKATLMAAWTSLYNA  124


>gi|269793650|ref|YP_003313105.1| hypothetical protein Sked_03030 [Sanguibacter keddieii DSM 10542]
 gi|269095835|gb|ACZ20271.1| hypothetical protein Sked_03030 [Sanguibacter keddieii DSM 10542]
Length=200

 Score = 50.8 bits (120),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 46/160 (29%), Positives = 61/160 (39%), Gaps = 22/160 (13%)

Query  114  GPKPQEPPP---DPVPFPPYQPKVWAACRARGQDPDKVVRTFHHAPMSARFRSLPAGDSV  170
            G +P E  P   DPV           AC    Q  D  VR          F SL  G   
Sbjct  51   GSRPGEVTPMLLDPVDL--------VACNVLNQ-VDHEVRRIDDV---KYFSSLGGGSVS  98

Query  171  LYCGNDKYGLLHIQAKHGRQWHDIADARWPSAGNWRYLADYAIGATLAYPERVEYNQDND  230
            L CG+ K+G  HI+ +H + W ++      +   W     + +  +L YP RV    DN 
Sbjct  99   LTCGDSKHGYRHIRDRHQQDWQNVIAKVDDTHSRWDDFMFFVVRESLTYPARVVDKSDNK  158

Query  231  T-----FAVYRRMSLPDGRYVFTTRVIISARDGKIITAFP  265
                    +     +P   Y F   VII A   K+ITA P
Sbjct  159  ICYTAPIILINSDMVP--VYEFHPTVIIGADTKKVITAHP  196


>gi|240172400|ref|ZP_04751059.1| hypothetical protein MkanA1_23998 [Mycobacterium kansasii ATCC 
12478]
Length=423

 Score = 50.4 bits (119),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 39/108 (37%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query  18   VSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLA  77
            VS++ D  VV  +  A+ + V GR  L  +  E E AV  +  L  DTPAGAR+F RFL 
Sbjct  42   VSSQLDLQVVSAILNAHLTAVEGRDALNQLQQETEAAVRTRSDL--DTPAGARDFQRFLI  99

Query  78   TKAHDITRVLAATAAESQAGAARLRSLASSY-----QAVGFGPKPQEP  120
             K  DI  V+A  + +  + A  + +  S Y     +A   GP P  P
Sbjct  100  GKLRDIREVVANASLDDTSKATLMAAWTSLYNASKNEAGAVGPGPATP  147


>gi|254819082|ref|ZP_05224083.1| hypothetical protein MintA_04103 [Mycobacterium intracellulare 
ATCC 13950]
Length=485

 Score = 49.7 bits (117),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 35/97 (37%), Positives = 49/97 (51%), Gaps = 2/97 (2%)

Query  14   QHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFS  73
            Q    S++ D  VV  +  A+ S V GR  L  +  E E AV  +    LDTPAGAR+F 
Sbjct  102  QQNSASSQLDMQVVSAILNAHLSAVDGREALTKLQHETEAAVLMRS--DLDTPAGARDFQ  159

Query  74   RFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            RFL  K  DI  V+   + +  + +A + +  S Y A
Sbjct  160  RFLIGKLRDIRAVVLNASLDDTSKSALMAAWTSLYDA  196


>gi|254773089|ref|ZP_05214605.1| hypothetical protein MaviaA2_00186 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=483

 Score = 49.3 bits (116),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 35/97 (37%), Positives = 49/97 (51%), Gaps = 2/97 (2%)

Query  14   QHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFS  73
            Q   VS++ D  VV  +  A+   V GR  L  +  E E AV  +    LDTPAGAR+F 
Sbjct  99   QQNSVSSQLDMQVVTAILNAHLKAVDGREALTKLQQETEAAVRTRS--DLDTPAGARDFQ  156

Query  74   RFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            RFL  K  DI  V+   + +  + +A + +  S Y A
Sbjct  157  RFLIGKLRDIRAVVLNASLDDTSKSALMAAWTSLYDA  193


>gi|118462713|ref|YP_879344.1| hypothetical protein MAV_0044 [Mycobacterium avium 104]
 gi|118164000|gb|ABK64897.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=483

 Score = 48.9 bits (115),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 35/97 (37%), Positives = 49/97 (51%), Gaps = 2/97 (2%)

Query  14   QHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFS  73
            Q   VS++ D  VV  +  A+   V GR  L  +  E E AV  +    LDTPAGAR+F 
Sbjct  99   QQNSVSSQLDMQVVTAILNAHLKAVDGREALTKLQQETEAAVRTRS--DLDTPAGARDFQ  156

Query  74   RFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            RFL  K  DI  V+   + +  + +A + +  S Y A
Sbjct  157  RFLIGKLRDIRAVVLNASLDDTSKSALMAAWTSLYDA  193


>gi|41406136|ref|NP_958972.1| hypothetical protein MAP0038 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41394484|gb|AAS02355.1| hypothetical protein MAP_0038 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336459447|gb|EGO38389.1| Biofilm regulator BssS [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=483

 Score = 48.9 bits (115),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 35/97 (37%), Positives = 49/97 (51%), Gaps = 2/97 (2%)

Query  14   QHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFS  73
            Q   VS++ D  VV  +  A+   V GR  L  +  E E AV  +    LDTPAGAR+F 
Sbjct  99   QQNSVSSQLDMQVVTAILNAHLKAVDGREALTKLQQETEAAVRTRS--DLDTPAGARDFQ  156

Query  74   RFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            RFL  K  DI  V+   + +  + +A + +  S Y A
Sbjct  157  RFLIGKLRDIRAVVLNASLDDTSKSALMAAWTSLYDA  193


>gi|253796941|ref|YP_003029942.1| hypothetical protein TBMG_00026 [Mycobacterium tuberculosis KZN 
1435]
 gi|289552276|ref|ZP_06441486.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|297632497|ref|ZP_06950277.1| hypothetical protein MtubK4_00145 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297729468|ref|ZP_06958586.1| hypothetical protein MtubKR_00155 [Mycobacterium tuberculosis 
KZN R506]
 gi|313656797|ref|ZP_07813677.1| hypothetical protein MtubKV_00155 [Mycobacterium tuberculosis 
KZN V2475]
 gi|253318444|gb|ACT23047.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289436908|gb|EFD19401.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|328456732|gb|AEB02155.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=448

 Score = 48.5 bits (114),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLKDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|289764141|ref|ZP_06523519.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289711647|gb|EFD75663.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=448

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLKDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|15607168|ref|NP_214540.1| hypothetical protein Rv0026 [Mycobacterium tuberculosis H37Rv]
 gi|148659786|ref|YP_001281309.1| hypothetical protein MRA_0029 [Mycobacterium tuberculosis H37Ra]
 gi|148821217|ref|YP_001285971.1| hypothetical protein TBFG_10026 [Mycobacterium tuberculosis F11]
 21 more sequence titles
 gi|167968158|ref|ZP_02550435.1| hypothetical protein MtubH3_09027 [Mycobacterium tuberculosis 
H37Ra]
 gi|254548958|ref|ZP_05139405.1| hypothetical protein Mtube_00575 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289747796|ref|ZP_06507174.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289760123|ref|ZP_06519501.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294995639|ref|ZP_06801330.1| hypothetical protein Mtub2_14317 [Mycobacterium tuberculosis 
210]
 gi|298527424|ref|ZP_07014833.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306795624|ref|ZP_07433926.1| hypothetical protein TMFG_02189 [Mycobacterium tuberculosis SUMu006]
 gi|307082486|ref|ZP_07491599.1| hypothetical protein TMLG_00758 [Mycobacterium tuberculosis SUMu012]
 gi|14195543|sp|P71596.2|YO26_MYCTU RecName: Full=Uncharacterized protein Rv0026/MT0029
 gi|1552581|emb|CAB02411.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148503938|gb|ABQ71747.1| hypothetical protein MRA_0029 [Mycobacterium tuberculosis H37Ra]
 gi|148719744|gb|ABR04369.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|289688324|gb|EFD55812.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289715687|gb|EFD79699.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497218|gb|EFI32512.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308343916|gb|EFP32767.1| hypothetical protein TMFG_02189 [Mycobacterium tuberculosis SUMu006]
 gi|308367776|gb|EFP56627.1| hypothetical protein TMLG_00758 [Mycobacterium tuberculosis SUMu012]
 gi|326905787|gb|EGE52720.1| hypothetical protein TBPG_03752 [Mycobacterium tuberculosis W-148]
 gi|339293104|gb|AEJ45215.1| hypothetical protein CCDC5079_0025 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339296753|gb|AEJ48863.1| hypothetical protein CCDC5180_0026 [Mycobacterium tuberculosis 
CCDC5180]
 gi|344217844|gb|AEM98474.1| hypothetical protein MTCTRI2_0029 [Mycobacterium tuberculosis 
CTRI-2]
Length=448

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLKDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|342860246|ref|ZP_08716898.1| hypothetical protein MCOL_15255 [Mycobacterium colombiense CECT 
3035]
 gi|342132624|gb|EGT85853.1| hypothetical protein MCOL_15255 [Mycobacterium colombiense CECT 
3035]
Length=483

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 37/111 (34%), Positives = 55/111 (50%), Gaps = 4/111 (3%)

Query  12   LTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARN  71
            L+Q    S++ D  V+  +  A+   V GR  L  +  E E AV  +    LDTPAGAR+
Sbjct  100  LSQQNSASSQLDMQVISAILNAHLRAVDGREALTKLQHETEAAVRIRS--DLDTPAGARD  157

Query  72   FSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGP--KPQEP  120
            F RFL  K  DI  V+   + +  + +A + +  S Y A    P   P++P
Sbjct  158  FQRFLIGKLRDIREVVLNASLDDTSKSALMAAWTSLYDASKGEPAAPPEQP  208


>gi|254366485|ref|ZP_04982529.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134151997|gb|EBA44042.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
Length=448

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLKDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|15839400|ref|NP_334437.1| hypothetical protein MT0029 [Mycobacterium tuberculosis CDC1551]
 gi|254233430|ref|ZP_04926756.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|13879071|gb|AAK44251.1| hypothetical protein MT0029 [Mycobacterium tuberculosis CDC1551]
 gi|124603223|gb|EAY61498.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|323717365|gb|EGB26570.1| hypothetical protein TMMG_00445 [Mycobacterium tuberculosis CDC1551A]
Length=448

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLKDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|31791203|ref|NP_853696.1| hypothetical protein Mb0027 [Mycobacterium bovis AF2122/97]
 gi|121635936|ref|YP_976159.1| hypothetical protein BCG_0057 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224988409|ref|YP_002643076.1| hypothetical protein JTY_0027 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31616788|emb|CAD92889.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121491583|emb|CAL70041.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224771522|dbj|BAH24328.1| hypothetical protein JTY_0027 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341599952|emb|CCC62620.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=477

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLKDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|339630109|ref|YP_004721751.1| hypothetical protein MAF_00260 [Mycobacterium africanum GM041182]
 gi|339329465|emb|CCC25100.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=450

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLKDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|289445551|ref|ZP_06435295.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289572602|ref|ZP_06452829.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289418509|gb|EFD15710.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289537033|gb|EFD41611.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=477

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLKDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|289441393|ref|ZP_06431137.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289567911|ref|ZP_06448138.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289748490|ref|ZP_06507868.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289756085|ref|ZP_06515463.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289414312|gb|EFD11552.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289541664|gb|EFD45313.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289689077|gb|EFD56506.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289696672|gb|EFD64101.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=477

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLKDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|340625059|ref|YP_004743511.1| hypothetical protein MCAN_00251 [Mycobacterium canettii CIPT 
140010059]
 gi|340003249|emb|CCC42366.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=450

 Score = 47.8 bits (112),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 34/92 (37%), Positives = 49/92 (54%), Gaps = 2/92 (2%)

Query  19   SAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLAT  78
            +A+ D  VV  +  A+   V G   L  +  EIE AV  +    LDTPAGAR+F RFL  
Sbjct  97   TAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRS--DLDTPAGARDFQRFLIG  154

Query  79   KAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            K  DI  V+A  + ++ + +A + +  S Y A
Sbjct  155  KLRDIREVVATASLDAASKSALMAAWTSLYDA  186


>gi|15839399|ref|NP_334436.1| hypothetical protein MT0028 [Mycobacterium tuberculosis CDC1551]
 gi|254233429|ref|ZP_04926755.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254366484|ref|ZP_04982528.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|13879069|gb|AAK44250.1| hypothetical protein MT0028 [Mycobacterium tuberculosis CDC1551]
 gi|124603222|gb|EAY61497.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151996|gb|EBA44041.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|323717364|gb|EGB26569.1| hypothetical protein TMMG_00444 [Mycobacterium tuberculosis CDC1551A]
Length=90

 Score = 47.0 bits (110),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 28/61 (46%), Positives = 35/61 (58%), Gaps = 1/61 (1%)

Query  14  QHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFS  73
           QH  V AE DR +   L  A+ ++    RRL AI AE++ AV  Q  L +DTP GAR F 
Sbjct  22  QHDAV-AEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQ  80

Query  74  R  74
           R
Sbjct  81  R  81


>gi|296167099|ref|ZP_06849509.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897541|gb|EFG77137.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=410

 Score = 46.6 bits (109),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 32/93 (35%), Positives = 49/93 (53%), Gaps = 2/93 (2%)

Query  18   VSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAGARNFSRFLA  77
            VS++ D  V+  +  A+ + V GR  L  +  + E AV  +    LDTPAGAR+F RFL 
Sbjct  41   VSSQLDMQVITAILNAHLNAVEGREALAKLQQDTEAAVRTRS--DLDTPAGARDFQRFLI  98

Query  78   TKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
             K  DI  V+   + +  + +A + +  S Y A
Sbjct  99   GKLRDIRAVVLNASLDDTSKSALMAAWTSLYDA  131


>gi|118615958|ref|YP_904290.1| hypothetical protein MUL_0044 [Mycobacterium ulcerans Agy99]
 gi|118568068|gb|ABL02819.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=421

 Score = 46.2 bits (108),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 34/102 (34%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query  9    EVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLDTPAG  68
            +VAL     +S++ D  V+  +  A+ + V G   L  +  E E AV  +    LDT AG
Sbjct  25   KVALAHQNSMSSQLDLQVIAAILNAHLTAVDGSEALDELQQETEAAVRTRS--DLDTLAG  82

Query  69   ARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQA  110
            AR+F RFL  K  DI  V+A  + +  + A  + +  S Y A
Sbjct  83   ARDFQRFLIGKLRDIREVVATASLDDTSKATLMAAWTSLYNA  124


>gi|169245942|gb|ACA50963.1| conserved hypothetical protein [Mycobacterium marinum DL240490]
Length=511

 Score = 42.0 bits (97),  Expect = 0.11, Method: Compositional matrix adjust.
 Identities = 31/107 (29%), Positives = 51/107 (48%), Gaps = 2/107 (1%)

Query  5    RRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLD  64
            +R  E     H  ++ + D  +   + +A  S   GR+RL  +  EI + +  +    LD
Sbjct  114  KRLDEALARNHSAIN-DADDQLADAVLKASSSSAEGRQRLQRLQQEIIDEI-DKLGSSLD  171

Query  65   TPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAV  111
            TPAG +  + FL  K  DI  VL     +S + A  L  L++ Y+A+
Sbjct  172  TPAGQQQLAEFLQGKTGDILNVLKNAGLDSDSQARVLDGLSARYRAL  218


>gi|209418107|ref|YP_002274136.1| hypothetical protein MULP_101 [Mycobacterium liflandii 128FXT]
 gi|169409239|gb|ACA57645.1| conserved hypothetical protein [Mycobacterium liflandii 128FXT]
Length=511

 Score = 42.0 bits (97),  Expect = 0.11, Method: Compositional matrix adjust.
 Identities = 31/107 (29%), Positives = 51/107 (48%), Gaps = 2/107 (1%)

Query  5    RRAREVALTQHIGVSAETDRAVVPKLRQAYDSLVCGRRRLGAIGAEIENAVAHQRALGLD  64
            +R  E     H  ++ + D  +   + +A  S   GR+RL  +  EI + +  +    LD
Sbjct  114  KRLDEALARNHSAIN-DADDQLADAVLKASSSSAEGRQRLQRLQQEIIDEI-DKLGSSLD  171

Query  65   TPAGARNFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAV  111
            TPAG +  + FL  K  DI  VL     +S + A  L  L++ Y+A+
Sbjct  172  TPAGQQQLAEFLQGKTGDILNVLKNAGLDSDSQARVLDGLSARYRAL  218


>gi|238918983|ref|YP_002932497.1| NADH oxidase [Edwardsiella ictaluri 93-146]
 gi|238868551|gb|ACR68262.1| NADH oxidase [Edwardsiella ictaluri 93-146]
Length=688

 Score = 40.0 bits (92),  Expect = 0.39, Method: Compositional matrix adjust.
 Identities = 26/75 (35%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query  61   LGLDTPAGAR-NFSRFLATKAHDITRVLAATAAESQAGAARLRSLASSYQAVGFGPKPQE  119
            LG D P G R N   F+A  A  +   +    A  QAGA  +     S    GFGP P  
Sbjct  219  LGEDFPVGVRINGEEFMAQGAMTLEESIQIAQALEQAGACYI-----SVSGYGFGPLPMT  273

Query  120  PPPDPVPFPPYQPKV  134
              PD  P+P  +P +
Sbjct  274  YVPDYFPYPEPEPAM  288



Lambda     K      H
   0.321    0.135    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 410477079682




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40