BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0742

Length=175
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|57116772|ref|YP_177749.1|  PE-PGRS family protein [Mycobacteri...   303    6e-81
gi|339630810|ref|YP_004722452.1|  PE-PGRS family protein [Mycobac...   302    1e-80
gi|15840152|ref|NP_335189.1|  PE_PGRS family protein [Mycobacteri...   297    5e-79
gi|313657551|ref|ZP_07814431.1|  PE-PGRS family protein [Mycobact...   295    2e-78
gi|306970958|ref|ZP_07483619.1|  putative PE family protein [Myco...   256    8e-67
gi|306774854|ref|ZP_07413191.1|  hypothetical protein TMAG_02626 ...   242    1e-62
gi|240173448|ref|ZP_04752106.1|  PE-PGRS family protein [Mycobact...   142    2e-32
gi|167968303|ref|ZP_02550580.1|  PE-PGRS family protein [Mycobact...   134    4e-30
gi|289442143|ref|ZP_06431887.1|  predicted protein [Mycobacterium...   134    4e-30
gi|289746544|ref|ZP_06505922.1|  PE-PGRS family protein [Mycobact...   134    4e-30
gi|167967431|ref|ZP_02549708.1|  PE-PGRS family protein [Mycobact...   134    5e-30
gi|308373497|ref|ZP_07432529.2|  putative PE family protein [Myco...   134    6e-30
gi|308375491|ref|ZP_07444127.2|  hypothetical protein TMGG_02130 ...   134    6e-30
gi|148823929|ref|YP_001288683.1|  PE-PGRS family protein [Mycobac...   134    6e-30
gi|289444285|ref|ZP_06434029.1|  PE PGRS domain-containing protei...   134    6e-30
gi|254551797|ref|ZP_05142244.1|  PE-PGRS family protein [Mycobact...   134    6e-30
gi|148662583|ref|YP_001284106.1|  PE-PGRS family protein [Mycobac...   134    7e-30
gi|289754845|ref|ZP_06514223.1|  PE-PGRS family protein [Mycobact...   134    7e-30
gi|308371120|ref|ZP_07423870.2|  putative PE family protein [Myco...   133    8e-30
gi|308377117|ref|ZP_07441169.2|  hypothetical protein TMHG_01939 ...   133    9e-30
gi|308232232|ref|ZP_07415356.2|  hypothetical protein TMAG_03126 ...   133    9e-30
gi|308378086|ref|ZP_07668663.1|  hypothetical protein TMIG_02240 ...   133    9e-30
gi|308374677|ref|ZP_07436947.2|  hypothetical protein TMFG_03636 ...   133    9e-30
gi|297732344|ref|ZP_06961462.1|  PE-PGRS family protein [Mycobact...   133    9e-30
gi|308369846|ref|ZP_07419259.2|  hypothetical protein TMBG_02876 ...   133    1e-29
gi|308379305|ref|ZP_07485795.2|  hypothetical protein TMJG_01723 ...   133    1e-29
gi|289758868|ref|ZP_06518246.1|  PE-PGRS family protein [Mycobact...   133    1e-29
gi|15842281|ref|NP_337318.1|  PE_PGRS family protein [Mycobacteri...   133    1e-29
gi|289448397|ref|ZP_06438141.1|  PE-PGRS family protein [Mycobact...   133    1e-29
gi|57117018|ref|YP_177902.1|  PE-PGRS family protein [Mycobacteri...   132    2e-29
gi|340627742|ref|YP_004746194.1|  PE-PGRS family protein [Mycobac...   132    2e-29
gi|297635348|ref|ZP_06953128.1|  PE-PGRS family protein [Mycobact...   132    2e-29
gi|313659677|ref|ZP_07816557.1|  PE-PGRS family protein [Mycobact...   132    3e-29
gi|323720869|gb|EGB29936.1|  PE-PGRS family protein [Mycobacteriu...   130    7e-29
gi|340627405|ref|YP_004745857.1|  pe_pgrs 33 [Mycobacterium canet...   129    1e-28
gi|340626769|ref|YP_004745221.1|  PE-PGRS family protein [Mycobac...   129    2e-28
gi|240173304|ref|ZP_04751962.1|  PE-PGRS family protein [Mycobact...   127    5e-28
gi|289441657|ref|ZP_06431401.1|  PE PGRS domain-containing protei...   127    7e-28
gi|289574498|ref|ZP_06454725.1|  PE-PGRS family protein [Mycobact...   127    8e-28
gi|308231948|ref|ZP_07414373.2|  hypothetical protein TMAG_01994 ...   125    3e-27
gi|148823031|ref|YP_001287785.1|  PE-PGRS family protein [Mycobac...   125    3e-27
gi|15841288|ref|NP_336325.1|  PE_PGRS family protein [Mycobacteri...   125    3e-27
gi|289554408|ref|ZP_06443618.1|  predicted protein [Mycobacterium...   125    3e-27
gi|306797636|ref|ZP_07435938.1|  putative PE family protein [Myco...   124    4e-27
gi|148821475|ref|YP_001286229.1|  PE-PGRS family protein [Mycobac...   124    4e-27
gi|297634379|ref|ZP_06952159.1|  PE-PGRS family protein [Mycobact...   124    5e-27
gi|344219640|gb|AEN00271.1|  PE-PGRS family protein [Mycobacteriu...   124    5e-27
gi|294996728|ref|ZP_06802419.1|  PE-PGRS family protein [Mycobact...   124    5e-27
gi|51832320|gb|AAU10330.1|  PE_PGRS 33 [Mycobacterium tuberculosis]    124    5e-27
gi|31793008|ref|NP_855501.1|  PE-PGRS family protein [Mycobacteri...   124    5e-27


>gi|57116772|ref|YP_177749.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|298524233|ref|ZP_07011642.1| PE-PGRS family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|340625762|ref|YP_004744214.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 7 more sequence titles
 
gi|7476124|pir||A70824 hypothetical glycine-rich protein Rv0742 - Mycobacterium tuberculosis 
(strain H37RV)
 gi|38490224|emb|CAE55315.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|41019340|gb|AAR98575.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|298494027|gb|EFI29321.1| PE-PGRS family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326905036|gb|EGE51969.1| PE-PGRS family protein [Mycobacterium tuberculosis W-148]
 gi|340003952|emb|CCC43087.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|344218567|gb|AEM99197.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=175

 Score =  303 bits (776),  Expect = 6e-81, Method: Compositional matrix adjust.
 Identities = 174/175 (99%), Positives = 175/175 (100%), Gaps = 0/175 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ
Sbjct  1    MSFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG
Sbjct  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120

Query  121  NGADGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG  175
            NGADGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG
Sbjct  121  NGADGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG  175


>gi|339630810|ref|YP_004722452.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339330166|emb|CCC25824.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=175

 Score =  302 bits (773),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 173/175 (99%), Positives = 174/175 (99%), Gaps = 0/175 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ
Sbjct  1    MSFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
             YQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG
Sbjct  61   VYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120

Query  121  NGADGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG  175
            NGADGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG
Sbjct  121  NGADGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG  175


>gi|15840152|ref|NP_335189.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|31791928|ref|NP_854421.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|121636664|ref|YP_976887.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 25 more sequence titles
 
gi|148660518|ref|YP_001282041.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148821947|ref|YP_001286701.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|224989136|ref|YP_002643823.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797686|ref|YP_003030687.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|254549706|ref|ZP_05140153.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289552999|ref|ZP_06442209.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|289744466|ref|ZP_06503844.1| PE PGRS family protein [Mycobacterium tuberculosis 02_1987]
 gi|289760870|ref|ZP_06520248.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503]
 gi|294996227|ref|ZP_06801918.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
 gi|297633244|ref|ZP_06951024.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297730224|ref|ZP_06959342.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
 gi|13880304|gb|AAK45003.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|31617515|emb|CAD93625.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492311|emb|CAL70778.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148504670|gb|ABQ72479.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148720474|gb|ABR05099.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|224772249|dbj|BAH25055.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319189|gb|ACT23792.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289437631|gb|EFD20124.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|289684994|gb|EFD52482.1| PE PGRS family protein [Mycobacterium tuberculosis 02_1987]
 gi|289708376|gb|EFD72392.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503]
 gi|328457466|gb|AEB02889.1| hypothetical protein TBSG_00760 [Mycobacterium tuberculosis KZN 
4207]
 gi|339293767|gb|AEJ45878.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339297406|gb|AEJ49516.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
 gi|341600680|emb|CCC63350.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=172

 Score =  297 bits (760),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 171/172 (99%), Positives = 172/172 (100%), Gaps = 0/172 (0%)

Query  4    VIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ  63
            +IAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ
Sbjct  1    MIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ  60

Query  64   ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA  123
            ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA
Sbjct  61   ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA  120

Query  124  DGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG  175
            DGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG
Sbjct  121  DGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG  172


>gi|313657551|ref|ZP_07814431.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
Length=172

 Score =  295 bits (755),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 170/172 (99%), Positives = 171/172 (99%), Gaps = 0/172 (0%)

Query  4    VIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ  63
            +IAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ
Sbjct  1    MIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ  60

Query  64   ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA  123
            ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA
Sbjct  61   ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA  120

Query  124  DGAPGTGAAGGAGGLLFGNGGAGGSGAPGGAGGLLFGNGGAGGPGASGGALG  175
            DGAPGTGAAGGAGGLLFGNGGAGGSG PGGAGGLLFGNGGAGGPGASGGALG
Sbjct  121  DGAPGTGAAGGAGGLLFGNGGAGGSGXPGGAGGLLFGNGGAGGPGASGGALG  172


>gi|306970958|ref|ZP_07483619.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308359577|gb|EFP48428.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
Length=150

 Score =  256 bits (654),  Expect = 8e-67, Method: Compositional matrix adjust.
 Identities = 147/150 (98%), Positives = 148/150 (99%), Gaps = 0/150 (0%)

Query  4    VIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ  63
            +IAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ
Sbjct  1    MIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ  60

Query  64   ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA  123
            ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA
Sbjct  61   ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA  120

Query  124  DGAPGTGAAGGAGGLLFGNGGAGGSGAPGG  153
            DGAPGTGAAGGAGGLLFGNGGAGG GA GG
Sbjct  121  DGAPGTGAAGGAGGLLFGNGGAGGPGASGG  150


>gi|306774854|ref|ZP_07413191.1| hypothetical protein TMAG_02626 [Mycobacterium tuberculosis SUMu001]
 gi|308216743|gb|EFO76142.1| hypothetical protein TMAG_02626 [Mycobacterium tuberculosis SUMu001]
Length=138

 Score =  242 bits (618),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 137/138 (99%), Positives = 138/138 (100%), Gaps = 0/138 (0%)

Query  4    VIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ  63
            +IAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ
Sbjct  1    MIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQ  60

Query  64   ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA  123
            ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA
Sbjct  61   ALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGA  120

Query  124  DGAPGTGAAGGAGGLLFG  141
            DGAPGTGAAGGAGGLLFG
Sbjct  121  DGAPGTGAAGGAGGLLFG  138


>gi|240173448|ref|ZP_04752106.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=304

 Score =  142 bits (358),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 115/167 (69%), Positives = 132/167 (80%), Gaps = 7/167 (4%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +S+V+ APE + AAATDL +IGS +  A+A AAA TTA+LAAGAD+VS AIAA FGAH Q
Sbjct  1    MSYVVVAPEIVVAAATDLTNIGSALSEASAVAAAPTTAILAAGADEVSAAIAALFGAHAQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
             YQALSAQA  FH QFVQALTAGAG+YA+AEAASA+ + S LLD +NAP  A  GRPLIG
Sbjct  61   VYQALSAQAEAFHTQFVQALTAGAGAYASAEAASASPLQS-LLDLVNAPTQAVFGRPLIG  119

Query  121  NGADGAPGTGAAGGAGGLLFGNGGAGGSGAPGG------AGGLLFGN  161
            NGA+GAPGTGA GG GG+LFGNGGAGGSG P        AGG+LFGN
Sbjct  120  NGANGAPGTGANGGDGGILFGNGGAGGSGGPNQAGGNGGAGGILFGN  166


>gi|167968303|ref|ZP_02550580.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=160

 Score =  134 bits (338),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)

Query  16   TDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQALSAQAATFHIQ  75
            TDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQALSAQAATFHIQ
Sbjct  13   TDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQALSAQAATFHIQ  72

Query  76   FVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGADG  125
            FVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGADG
Sbjct  73   FVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGADG  122


>gi|289442143|ref|ZP_06431887.1| predicted protein [Mycobacterium tuberculosis T46]
 gi|289568689|ref|ZP_06448916.1| predicted protein [Mycobacterium tuberculosis T17]
 gi|289415062|gb|EFD12302.1| predicted protein [Mycobacterium tuberculosis T46]
 gi|289542443|gb|EFD46091.1| predicted protein [Mycobacterium tuberculosis T17]
Length=153

 Score =  134 bits (338),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)

Query  16   TDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQALSAQAATFHIQ  75
            TDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQALSAQAATFHIQ
Sbjct  13   TDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQALSAQAATFHIQ  72

Query  76   FVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGADG  125
            FVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGADG
Sbjct  73   FVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGADG  122


>gi|289746544|ref|ZP_06505922.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987]
 gi|289687072|gb|EFD54560.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987]
Length=267

 Score =  134 bits (338),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  41   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  100

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  101  AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  159

Query  121  NGADGAP  127
            NGA+G P
Sbjct  160  NGANGKP  166


>gi|167967431|ref|ZP_02549708.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=248

 Score =  134 bits (337),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  41   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  100

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  101  AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  159

Query  121  NGADGAP  127
            NGA+G P
Sbjct  160  NGANGKP  166


>gi|308373497|ref|ZP_07432529.2| putative PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308337485|gb|EFP26336.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
Length=248

 Score =  134 bits (336),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  41   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  100

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  101  AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  159

Query  121  NGADGAP  127
            NGA+G P
Sbjct  160  NGANGKP  166


>gi|308375491|ref|ZP_07444127.2| hypothetical protein TMGG_02130 [Mycobacterium tuberculosis SUMu007]
 gi|308346055|gb|EFP34906.1| hypothetical protein TMGG_02130 [Mycobacterium tuberculosis SUMu007]
Length=252

 Score =  134 bits (336),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  41   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  100

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  101  AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  159

Query  121  NGADGAP  127
            NGA+G P
Sbjct  160  NGANGKP  166


>gi|148823929|ref|YP_001288683.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253798177|ref|YP_003031178.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289553474|ref|ZP_06442684.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|148722456|gb|ABR07081.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253319680|gb|ACT24283.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289438106|gb|EFD20599.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|328457950|gb|AEB03373.1| hypothetical protein TBSG_01244 [Mycobacterium tuberculosis KZN 
4207]
Length=565

 Score =  134 bits (336),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  41   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  100

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  101  AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  159

Query  121  NGADGAP  127
            NGA+G P
Sbjct  160  NGANGKP  166


>gi|289444285|ref|ZP_06434029.1| PE PGRS domain-containing protein [Mycobacterium tuberculosis 
T46]
 gi|289417204|gb|EFD14444.1| PE PGRS domain-containing protein [Mycobacterium tuberculosis 
T46]
Length=442

 Score =  134 bits (336),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  41   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  100

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  101  AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  159

Query  121  NGADGAP  127
            NGA+G P
Sbjct  160  NGANGKP  166


>gi|254551797|ref|ZP_05142244.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=451

 Score =  134 bits (336),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  41   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  100

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  101  AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  159

Query  121  NGADGAP  127
            NGA+G P
Sbjct  160  NGANGKP  166


>gi|148662583|ref|YP_001284106.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148506735|gb|ABQ74544.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=559

 Score =  134 bits (336),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  35   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  94

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  95   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  153

Query  121  NGADGAP  127
            NGA+G P
Sbjct  154  NGANGKP  160


>gi|289754845|ref|ZP_06514223.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
 gi|289695432|gb|EFD62861.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
Length=396

 Score =  134 bits (336),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  41   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  100

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  101  AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  159

Query  121  NGADGAP  127
            NGA+G P
Sbjct  160  NGANGKP  166


>gi|308371120|ref|ZP_07423870.2| putative PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308329800|gb|EFP18651.1| putative PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|323718670|gb|EGB27833.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
Length=227

 Score =  133 bits (335),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  35   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  94

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  95   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  153

Query  121  NGADGAP  127
            NGA+G P
Sbjct  154  NGANGKP  160


>gi|308377117|ref|ZP_07441169.2| hypothetical protein TMHG_01939 [Mycobacterium tuberculosis SUMu008]
 gi|308348913|gb|EFP37764.1| hypothetical protein TMHG_01939 [Mycobacterium tuberculosis SUMu008]
Length=214

 Score =  133 bits (335),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  35   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  94

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  95   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  153

Query  121  NGADGAP  127
            NGA+G P
Sbjct  154  NGANGKP  160


>gi|308232232|ref|ZP_07415356.2| hypothetical protein TMAG_03126 [Mycobacterium tuberculosis SUMu001]
 gi|308214675|gb|EFO74074.1| hypothetical protein TMAG_03126 [Mycobacterium tuberculosis SUMu001]
Length=247

 Score =  133 bits (335),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  35   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  94

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  95   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  153

Query  121  NGADGAP  127
            NGA+G P
Sbjct  154  NGANGKP  160


>gi|308378086|ref|ZP_07668663.1| hypothetical protein TMIG_02240 [Mycobacterium tuberculosis SUMu009]
 gi|308353685|gb|EFP42536.1| hypothetical protein TMIG_02240 [Mycobacterium tuberculosis SUMu009]
Length=315

 Score =  133 bits (335),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  35   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  94

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  95   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  153

Query  121  NGADGAP  127
            NGA+G P
Sbjct  154  NGANGKP  160


>gi|308374677|ref|ZP_07436947.2| hypothetical protein TMFG_03636 [Mycobacterium tuberculosis SUMu006]
 gi|308341158|gb|EFP30009.1| hypothetical protein TMFG_03636 [Mycobacterium tuberculosis SUMu006]
Length=258

 Score =  133 bits (335),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  35   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  94

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  95   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  153

Query  121  NGADGAP  127
            NGA+G P
Sbjct  154  NGANGKP  160


>gi|297732344|ref|ZP_06961462.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=263

 Score =  133 bits (335),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  35   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  94

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  95   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  153

Query  121  NGADGAP  127
            NGA+G P
Sbjct  154  NGANGKP  160


>gi|308369846|ref|ZP_07419259.2| hypothetical protein TMBG_02876 [Mycobacterium tuberculosis SUMu002]
 gi|308326320|gb|EFP15171.1| hypothetical protein TMBG_02876 [Mycobacterium tuberculosis SUMu002]
Length=208

 Score =  133 bits (334),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  25   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  84

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  85   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  143

Query  121  NGADGAP  127
            NGA+G P
Sbjct  144  NGANGKP  150


>gi|308379305|ref|ZP_07485795.2| hypothetical protein TMJG_01723 [Mycobacterium tuberculosis SUMu010]
 gi|308357532|gb|EFP46383.1| hypothetical protein TMJG_01723 [Mycobacterium tuberculosis SUMu010]
Length=239

 Score =  133 bits (334),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  25   MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  84

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  85   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  143

Query  121  NGADGAP  127
            NGA+G P
Sbjct  144  NGANGKP  150


>gi|289758868|ref|ZP_06518246.1| PE-PGRS family protein [Mycobacterium tuberculosis T85]
 gi|289714432|gb|EFD78444.1| PE-PGRS family protein [Mycobacterium tuberculosis T85]
Length=237

 Score =  133 bits (334),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  1    MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  61   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  119

Query  121  NGADGAP  127
            NGA+G P
Sbjct  120  NGANGKP  126


>gi|15842281|ref|NP_337318.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13882574|gb|AAK47132.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=454

 Score =  133 bits (334),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  1    MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  61   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  119

Query  121  NGADGAP  127
            NGA+G P
Sbjct  120  NGANGKP  126


>gi|289448397|ref|ZP_06438141.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289421355|gb|EFD18556.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=365

 Score =  133 bits (334),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  1    MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  61   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  119

Query  121  NGADGAP  127
            NGA+G P
Sbjct  120  NGANGKP  126


>gi|57117018|ref|YP_177902.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|7476146|pir||D70878 hypothetical glycine-rich protein Rv2741 - Mycobacterium tuberculosis 
(strain H37RV)
 gi|41353446|emb|CAE55516.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|344220569|gb|AEN01200.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=525

 Score =  132 bits (333),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  1    MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  61   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  119

Query  121  NGADGAP  127
            NGA+G P
Sbjct  120  NGANGKP  126


>gi|340627742|ref|YP_004746194.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340005932|emb|CCC45099.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=525

 Score =  132 bits (332),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  1    MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGLHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  61   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  119

Query  121  NGADGAP  127
            NGA+G P
Sbjct  120  NGANGKP  126


>gi|297635348|ref|ZP_06953128.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=250

 Score =  132 bits (332),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  1    MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  61   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  119

Query  121  NGADGAP  127
            NGA+G P
Sbjct  120  NGANGKP  126


>gi|313659677|ref|ZP_07816557.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
Length=228

 Score =  132 bits (331),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 90/127 (71%), Positives = 106/127 (84%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE + AAA DLASIGST+ AA+AAA+A T A+LAAGAD+VS+A+AA FG HGQ
Sbjct  1    MSFVIAAPEFLTAAAMDLASIGSTVSAASAAASAPTVAILAAGADEVSIAVAALFGMHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALS QA+ FH QFVQALTAGA SYA+AEAA+   +   L+D INAPF +ALGRPLIG
Sbjct  61   AYQALSVQASAFHQQFVQALTAGAYSYASAEAAAVTPLQQ-LVDVINAPFRSALGRPLIG  119

Query  121  NGADGAP  127
            NGA+G P
Sbjct  120  NGANGKP  126


>gi|323720869|gb|EGB29936.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
Length=144

 Score =  130 bits (327),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 107/108 (99%), Positives = 108/108 (100%), Gaps = 0/108 (0%)

Query  18   LASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQALSAQAATFHIQFV  77
            +ASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQALSAQAATFHIQFV
Sbjct  1    MASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQAYQALSAQAATFHIQFV  60

Query  78   QALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGADG  125
            QALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGADG
Sbjct  61   QALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIGNGADG  108


>gi|340627405|ref|YP_004745857.1| pe_pgrs 33 [Mycobacterium canettii CIPT 140010059]
 gi|340005595|emb|CCC44759.1| pe_pgrs 33 [Mycobacterium canettii CIPT 140010059]
Length=506

 Score =  129 bits (325),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 86/127 (68%), Positives = 99/127 (78%), Gaps = 3/127 (2%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SF+IA+PEA+AA ATDL  IGS I AANA AAA TT +LAAG D+VS AI+A FGAH Q
Sbjct  1    MSFLIASPEALAATATDLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITS---PLLDAINAPFLAALGRP  117
            AYQALSA  A FH QFV  LTAGAGSY AAEAA+A+ + +    LL+AINAP LA LGRP
Sbjct  61   AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP  120

Query  118  LIGNGAD  124
            LIG+G D
Sbjct  121  LIGDGTD  127


>gi|340626769|ref|YP_004745221.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004959|emb|CCC44107.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=914

 Score =  129 bits (323),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 95/139 (69%), Positives = 112/139 (81%), Gaps = 4/139 (2%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIA PE IAAAATDLA++GSTI  ANAAAAANTT++LAAGAD++S AIAA FGAHG+
Sbjct  1    MSFVIAVPETIAAAATDLANLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQA SA+AA FH +FVQALT    +   A AA+ A+  +PLL++INAP LAA GRPLI 
Sbjct  61   AYQAASAEAAAFHGRFVQALT----TGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIA  116

Query  121  NGADGAPGTGAAGGAGGLL  139
            NGA+GAPGTGA GG  G L
Sbjct  117  NGANGAPGTGANGGDAGWL  135


>gi|240173304|ref|ZP_04751962.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=166

 Score =  127 bits (320),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 108/142 (77%), Positives = 120/142 (85%), Gaps = 1/142 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV AAPEA+ AAA DLA+IGST+GAANAAAAANTT++LAAGAD+VS AIAA FGAHGQ
Sbjct  1    MSFVFAAPEALVAAAGDLATIGSTVGAANAAAAANTTSLLAAGADEVSAAIAALFGAHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQ LS QAA FH QFVQALTAG G+  AA   +AA+   PLLDAINAPF+AA GRPLIG
Sbjct  61   AYQVLSGQAAAFHQQFVQALTAG-GTSYAAADYAAATPLQPLLDAINAPFVAATGRPLIG  119

Query  121  NGADGAPGTGAAGGAGGLLFGN  142
            NGA+GAPGTGA GGAGG L GN
Sbjct  120  NGANGAPGTGANGGAGGWLIGN  141


>gi|289441657|ref|ZP_06431401.1| PE PGRS domain-containing protein [Mycobacterium tuberculosis 
T46]
 gi|289414576|gb|EFD11816.1| PE PGRS domain-containing protein [Mycobacterium tuberculosis 
T46]
Length=334

 Score =  127 bits (318),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 103/139 (75%), Positives = 112/139 (81%), Gaps = 4/139 (2%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE IAAAATDLAS+ S+I AANAAAAANTTA+LAAGAD+VS A+AA FGAHGQ
Sbjct  31   MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ  90

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQA  FH QFVQALT    S   A AA+ A+ TSPLLD IN  FLA  GRPLIG
Sbjct  91   AYQALSAQAQAFHAQFVQALT----SGGGAYAAAEAAATSPLLDPINEFFLANTGRPLIG  146

Query  121  NGADGAPGTGAAGGAGGLL  139
            NGA+GAPGTGA G  GG L
Sbjct  147  NGANGAPGTGADGAPGGWL  165


>gi|289574498|ref|ZP_06454725.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289538929|gb|EFD43507.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
Length=293

 Score =  127 bits (318),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  7    MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  66

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  67   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  125

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  126  NGANGAP  132


>gi|308231948|ref|ZP_07414373.2| hypothetical protein TMAG_01994 [Mycobacterium tuberculosis SUMu001]
 gi|308370831|ref|ZP_07422882.2| hypothetical protein TMCG_02856 [Mycobacterium tuberculosis SUMu003]
 gi|308377833|ref|ZP_07480573.2| putative PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308379041|ref|ZP_07484807.2| putative PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308215511|gb|EFO74910.1| hypothetical protein TMAG_01994 [Mycobacterium tuberculosis SUMu001]
 gi|308330684|gb|EFP19535.1| hypothetical protein TMCG_02856 [Mycobacterium tuberculosis SUMu003]
 gi|308354438|gb|EFP43289.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308358369|gb|EFP47220.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
Length=194

 Score =  125 bits (314),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  21   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  81   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  139

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  140  NGANGAP  146


>gi|148823031|ref|YP_001287785.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253799138|ref|YP_003032139.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|148721558|gb|ABR06183.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253320641|gb|ACT25244.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328458893|gb|AEB04316.1| hypothetical protein TBSG_02187 [Mycobacterium tuberculosis KZN 
4207]
Length=518

 Score =  125 bits (314),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  21   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  81   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  139

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  140  NGANGAP  146


>gi|15841288|ref|NP_336325.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13881517|gb|AAK46139.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=491

 Score =  125 bits (314),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  21   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  81   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  139

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  140  NGANGAP  146


>gi|289554408|ref|ZP_06443618.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|289439040|gb|EFD21533.1| predicted protein [Mycobacterium tuberculosis KZN 605]
Length=518

 Score =  125 bits (314),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  21   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  81   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  139

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  140  NGANGAP  146


>gi|306797636|ref|ZP_07435938.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308342013|gb|EFP30864.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=161

 Score =  124 bits (312),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  1    MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  61   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  119

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  120  NGANGAP  126


>gi|148821475|ref|YP_001286229.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|148720002|gb|ABR04627.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|344218098|gb|AEM98728.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=372

 Score =  124 bits (312),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 101/140 (73%), Positives = 110/140 (79%), Gaps = 4/140 (2%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFVIAAPE IAAAATDLAS+ S+I AANAAAAANTTA+LAAGAD+VS A+AA FGAHGQ
Sbjct  1    MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQA  FH QF QALT    S   A AA+ A+  SPLLD IN  FLA  GRPLIG
Sbjct  61   AYQALSAQAQAFHAQFTQALT----SGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIG  116

Query  121  NGADGAPGTGAAGGAGGLLF  140
            NGA+GAPGTGA G  GG L 
Sbjct  117  NGANGAPGTGADGAPGGWLI  136


>gi|297634379|ref|ZP_06952159.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=354

 Score =  124 bits (311),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  1    MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  61   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  119

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  120  NGANGAP  126


>gi|344219640|gb|AEN00271.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=511

 Score =  124 bits (311),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  1    MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  61   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  119

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  120  NGANGAP  126


>gi|294996728|ref|ZP_06802419.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=501

 Score =  124 bits (311),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  1    MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  61   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  119

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  120  NGANGAP  126


>gi|51832320|gb|AAU10330.1| PE_PGRS 33 [Mycobacterium tuberculosis]
Length=501

 Score =  124 bits (311),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  1    MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  61   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  119

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  120  NGANGAP  126


>gi|31793008|ref|NP_855501.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|121637721|ref|YP_977944.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990205|ref|YP_002644892.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 6 more sequence titles
 
gi|339631871|ref|YP_004723513.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|31618599|emb|CAD94552.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493368|emb|CAL71840.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224773318|dbj|BAH26124.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|339331227|emb|CCC26910.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|341601748|emb|CCC64422.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=501

 Score =  124 bits (311),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 95/127 (75%), Positives = 104/127 (82%), Gaps = 1/127 (0%)

Query  1    ISFVIAAPEAIAAAATDLASIGSTIGAANAAAAANTTAVLAAGADQVSVAIAAAFGAHGQ  60
            +SFV+  PEA+AA ATDLA IGSTIG ANAAAA  TT VLAA AD+VS A+AA F  H Q
Sbjct  1    MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61   AYQALSAQAATFHIQFVQALTAGAGSYAAAEAASAASITSPLLDAINAPFLAALGRPLIG  120
            AYQALSAQAA FH QFV+ALTAGAGSYAAAEAASAA +   +LD INAP LA LGRPLIG
Sbjct  61   AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG-VLDVINAPALALLGRPLIG  119

Query  121  NGADGAP  127
            NGA+GAP
Sbjct  120  NGANGAP  126



Lambda     K      H
   0.313    0.130    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 145800812160




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40