BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0748
Length=85
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840161|ref|NP_335198.1| hypothetical protein MT0772.6 [Myco... 167 6e-40
gi|15607888|ref|NP_215262.1| hypothetical protein Rv0748 [Mycoba... 167 7e-40
gi|289749257|ref|ZP_06508635.1| conserved hypothetical protein [... 165 2e-39
gi|289573366|ref|ZP_06453593.1| antitoxin [Mycobacterium tubercu... 163 7e-39
gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG... 150 7e-35
gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25 148 3e-34
gi|289748048|ref|ZP_06507426.1| conserved hypothetical protein [... 139 2e-31
gi|289568188|ref|ZP_06448415.1| conserved hypothetical protein [... 106 1e-21
gi|254549713|ref|ZP_05140160.1| hypothetical protein Mtube_04496... 106 1e-21
gi|148660043|ref|YP_001281566.1| hypothetical protein MRA_0286 [... 104 5e-21
gi|289445811|ref|ZP_06435555.1| antitoxin [Mycobacterium tubercu... 100 6e-20
gi|15839659|ref|NP_334696.1| hypothetical protein MT0290 [Mycoba... 98.6 2e-19
gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC ... 52.8 2e-05
gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tubercu... 52.4 2e-05
gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycoba... 52.0 3e-05
gi|240171735|ref|ZP_04750394.1| hypothetical protein MkanA1_2064... 50.8 6e-05
gi|297623625|ref|YP_003705059.1| CopG family transcriptional reg... 50.4 9e-05
gi|160898240|ref|YP_001563822.1| antitoxin [Delftia acidovorans ... 47.4 7e-04
gi|337267946|ref|YP_004612001.1| hypothetical protein Mesop_3461... 46.6 0.001
gi|289441655|ref|ZP_06431399.1| antitoxin [Mycobacterium tubercu... 46.6 0.001
gi|88812000|ref|ZP_01127253.1| hypothetical protein NB231_06406 ... 45.4 0.003
gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122... 43.9 0.008
gi|15842141|ref|NP_337178.1| hypothetical protein MT2676 [Mycoba... 43.5 0.012
gi|344220429|gb|AEN01060.1| hypothetical protein MTCTRI2_2650 [M... 42.4 0.024
gi|302542962|ref|ZP_07295304.1| hypothetical protein SSOG_03387 ... 42.0 0.028
gi|306778586|ref|ZP_07416923.1| antitoxin [Mycobacterium tubercu... 42.0 0.033
gi|340627619|ref|YP_004746071.1| hypothetical protein MCAN_26441... 41.2 0.048
gi|15843316|ref|NP_338353.1| CopG family DNA-binding protein [My... 40.8 0.075
gi|296130775|ref|YP_003638025.1| putative transcriptional regula... 40.4 0.095
gi|16264147|ref|NP_436939.1| hypothetical protein SM_b20413 [Sin... 40.0 0.10
gi|336038110|gb|AEH84040.1| hypothetical protein SM11_pD1208 [Si... 40.0 0.11
gi|289573180|ref|ZP_06453407.1| antitoxin [Mycobacterium tubercu... 39.7 0.15
gi|206601847|gb|EDZ38330.1| Hypothetical protein CGL2_11278039 [... 39.7 0.16
gi|15607721|ref|NP_215095.1| hypothetical protein Rv0581 [Mycoba... 39.7 0.17
gi|344199816|ref|YP_004784142.1| hypothetical protein Acife_1683... 38.9 0.25
gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Sy... 38.9 0.27
gi|289446134|ref|ZP_06435878.1| antitoxin [Mycobacterium tubercu... 38.9 0.27
gi|304413693|ref|ZP_07395137.1| hypothetical protein REG_0768 [C... 38.5 0.35
gi|167969003|ref|ZP_02551280.1| hypothetical protein MtubH3_1363... 38.5 0.35
gi|254363539|ref|ZP_04979585.1| conserved hypothetical protein [... 38.5 0.37
gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 ... 38.1 0.40
gi|56478773|ref|YP_160362.1| hypothetical protein ebA5867 [Aroma... 38.1 0.44
gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430... 38.1 0.50
gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycoba... 37.7 0.53
gi|258593475|emb|CBE69814.1| conserved protein of unknown functi... 37.7 0.55
gi|340358884|ref|ZP_08681387.1| hypothetical protein HMPREF9062_... 37.7 0.61
gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_0316... 37.7 0.61
gi|340625611|ref|YP_004744063.1| hypothetical protein MCAN_05871... 37.4 0.73
gi|258593409|emb|CBE69748.1| conserved protein of unknown functi... 37.0 0.86
gi|116748339|ref|YP_845026.1| hypothetical protein Sfum_0895 [Sy... 37.0 1.0
>gi|15840161|ref|NP_335198.1| hypothetical protein MT0772.6 [Mycobacterium tuberculosis CDC1551]
gi|13880314|gb|AAK45012.1| hypothetical protein MT0772.6 [Mycobacterium tuberculosis CDC1551]
Length=88
Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR
Sbjct 4 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 63
Query 61 RGIDLTSNRALSEVLDEGLELNSRK 85
RGIDLTSNRALSEVLDEGLELNSRK
Sbjct 64 RGIDLTSNRALSEVLDEGLELNSRK 88
>gi|15607888|ref|NP_215262.1| hypothetical protein Rv0748 [Mycobacterium tuberculosis H37Rv]
gi|31791934|ref|NP_854427.1| hypothetical protein Mb0769 [Mycobacterium bovis AF2122/97]
gi|121636670|ref|YP_976893.1| hypothetical protein BCG_0798 [Mycobacterium bovis BCG str. Pasteur
1173P2]
59 more sequence titles
Length=85
Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR
Sbjct 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
Query 61 RGIDLTSNRALSEVLDEGLELNSRK 85
RGIDLTSNRALSEVLDEGLELNSRK
Sbjct 61 RGIDLTSNRALSEVLDEGLELNSRK 85
>gi|289749257|ref|ZP_06508635.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289689844|gb|EFD57273.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=85
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/85 (99%), Positives = 84/85 (99%), Gaps = 0/85 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR
Sbjct 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
Query 61 RGIDLTSNRALSEVLDEGLELNSRK 85
RGIDLTSNR LSEVLDEGLELNSRK
Sbjct 61 RGIDLTSNRVLSEVLDEGLELNSRK 85
>gi|289573366|ref|ZP_06453593.1| antitoxin [Mycobacterium tuberculosis K85]
gi|339630816|ref|YP_004722458.1| hypothetical protein MAF_07580 [Mycobacterium africanum GM041182]
gi|289537797|gb|EFD42375.1| antitoxin [Mycobacterium tuberculosis K85]
gi|339330172|emb|CCC25830.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=85
Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/85 (99%), Positives = 84/85 (99%), Gaps = 0/85 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT PVFDGGTGPR
Sbjct 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTGPVFDGGTGPR 60
Query 61 RGIDLTSNRALSEVLDEGLELNSRK 85
RGIDLTSNRALSEVLDEGLELNSRK
Sbjct 61 RGIDLTSNRALSEVLDEGLELNSRK 85
>gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988664|ref|YP_002643351.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str.
Tokyo 172]
gi|121491838|emb|CAL70300.1| Conserved hypothetical protein, antitoxin [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224771777|dbj|BAH24583.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341600207|emb|CCC62876.1| conserved hypothetical protein, antitoxin [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=85
Score = 150 bits (379), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/85 (91%), Positives = 78/85 (92%), Gaps = 0/85 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTTVSISDE+LA AKRRARERGQSLGAVIEDALRRE AAA GGARPTVPVFD GTGPR
Sbjct 1 MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPTVPVFDAGTGPR 60
Query 61 RGIDLTSNRALSEVLDEGLELNSRK 85
GIDLTSNR LSEVLDEGLELNSRK
Sbjct 61 PGIDLTSNRVLSEVLDEGLELNSRK 85
>gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25
Length=85
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/85 (90%), Positives = 77/85 (91%), Gaps = 0/85 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTTVSISDE+LA AKRRARERGQSLGAVIEDALRRE AAA GGARPTVPVFD GTGPR
Sbjct 1 MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPTVPVFDAGTGPR 60
Query 61 RGIDLTSNRALSEVLDEGLELNSRK 85
GIDLTSN LSEVLDEGLELNSRK
Sbjct 61 PGIDLTSNTVLSEVLDEGLELNSRK 85
>gi|289748048|ref|ZP_06507426.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289688576|gb|EFD56064.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=88
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/85 (96%), Positives = 81/85 (96%), Gaps = 0/85 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFD GTGPR
Sbjct 4 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDAGTGPR 63
Query 61 RGIDLTSNRALSEVLDEGLELNSRK 85
GIDLTSN LSEVLDEGLELNSRK
Sbjct 64 PGIDLTSNTVLSEVLDEGLELNSRK 88
>gi|289568188|ref|ZP_06448415.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289572856|ref|ZP_06453083.1| antitoxin [Mycobacterium tuberculosis K85]
gi|289748759|ref|ZP_06508137.1| antitoxin [Mycobacterium tuberculosis T92]
gi|289537287|gb|EFD41865.1| antitoxin [Mycobacterium tuberculosis K85]
gi|289541941|gb|EFD45590.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289689346|gb|EFD56775.1| antitoxin [Mycobacterium tuberculosis T92]
Length=60
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/60 (89%), Positives = 54/60 (90%), Gaps = 0/60 (0%)
Query 26 LGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK 85
+GAVIEDALRRE AAA GGARPTVPVFD GTGPR GIDLTSNR LSEVLDEGLELNSRK
Sbjct 1 MGAVIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNRVLSEVLDEGLELNSRK 60
>gi|254549713|ref|ZP_05140160.1| hypothetical protein Mtube_04496 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=82
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/82 (86%), Positives = 71/82 (87%), Gaps = 1/82 (1%)
Query 5 VSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR-RGI 63
+SISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGA P P F R RGI
Sbjct 1 MSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGASPDRPDFSTAVPVRGRGI 60
Query 64 DLTSNRALSEVLDEGLELNSRK 85
DLTSNRALSEVLDEGLELNSRK
Sbjct 61 DLTSNRALSEVLDEGLELNSRK 82
>gi|148660043|ref|YP_001281566.1| hypothetical protein MRA_0286 [Mycobacterium tuberculosis H37Ra]
gi|289552531|ref|ZP_06441741.1| antitoxin [Mycobacterium tuberculosis KZN 605]
gi|148504195|gb|ABQ72004.1| hypothetical protein MRA_0286 [Mycobacterium tuberculosis H37Ra]
gi|289437163|gb|EFD19656.1| antitoxin [Mycobacterium tuberculosis KZN 605]
Length=60
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/60 (87%), Positives = 53/60 (89%), Gaps = 0/60 (0%)
Query 26 LGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK 85
+GAVIEDALRRE AAA GGARPTVPVFD GTGPR GIDLTSN LSEVLDEGLELNSRK
Sbjct 1 MGAVIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNTVLSEVLDEGLELNSRK 60
>gi|289445811|ref|ZP_06435555.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
gi|289418769|gb|EFD15970.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
Length=57
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/57 (88%), Positives = 51/57 (90%), Gaps = 0/57 (0%)
Query 29 VIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK 85
+IEDALRRE AAA GGARPTVPVFD GTGPR GIDLTSNR LSEVLDEGLELNSRK
Sbjct 1 MIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNRVLSEVLDEGLELNSRK 57
>gi|15839659|ref|NP_334696.1| hypothetical protein MT0290 [Mycobacterium tuberculosis CDC1551]
gi|148821473|ref|YP_001286227.1| hypothetical protein TBFG_10282 [Mycobacterium tuberculosis F11]
gi|167968999|ref|ZP_02551276.1| hypothetical protein MtubH3_13612 [Mycobacterium tuberculosis
H37Ra]
15 more sequence titles
Length=57
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/57 (86%), Positives = 50/57 (88%), Gaps = 0/57 (0%)
Query 29 VIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK 85
+IEDALRRE AAA GGARPTVPVFD GTGPR GIDLTSN LSEVLDEGLELNSRK
Sbjct 1 MIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNTVLSEVLDEGLELNSRK 57
>gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC 12478]
Length=85
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/85 (38%), Positives = 49/85 (58%), Gaps = 4/85 (4%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGARPTVPVFDGGTG 58
MRTT+ I DE+ K RA G+++ AV+EDA+R G P+ GG
Sbjct 1 MRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGLNPPGQSAAGRYRVQPIGSGGLR 60
Query 59 PRRGIDLTSNRALSEVLDEGLELNS 83
P G+DL+SN A++E +DEG+ +++
Sbjct 61 P--GVDLSSNAAVAEAMDEGVPVDA 83
>gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=85
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (37%), Positives = 49/85 (58%), Gaps = 4/85 (4%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGARPTVPVFDGGTG 58
MRTT+ I DE+ K +A G+++ AV+EDA+RR G P GG
Sbjct 1 MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGMR 60
Query 59 PRRGIDLTSNRALSEVLDEGLELNS 83
P G+DL+SN AL+E +++G+ +++
Sbjct 61 P--GVDLSSNAALAEAMNDGVSVDA 83
>gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycobacterium tuberculosis H37Rv]
gi|31794048|ref|NP_856541.1| hypothetical protein Mb2896 [Mycobacterium bovis AF2122/97]
gi|121638753|ref|YP_978977.1| hypothetical protein BCG_2893 [Mycobacterium bovis BCG str. Pasteur
1173P2]
73 more sequence titles
Length=85
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/85 (37%), Positives = 49/85 (58%), Gaps = 4/85 (4%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGARPTVPVFDGGTG 58
MRTT+ I DE+ K +A G+++ AV+EDA+RR G P GG
Sbjct 1 MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGLR 60
Query 59 PRRGIDLTSNRALSEVLDEGLELNS 83
P G+DL+SN AL+E +++G+ +++
Sbjct 61 P--GVDLSSNAALAEAMNDGVSVDA 83
>gi|240171735|ref|ZP_04750394.1| hypothetical protein MkanA1_20645 [Mycobacterium kansasii ATCC
12478]
Length=86
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/85 (37%), Positives = 49/85 (58%), Gaps = 4/85 (4%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGARPTVPVFDGGTG 58
+RTT+ I DE+ K RA G+++ AV+EDA+R G P+ GG
Sbjct 2 VRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGLNPPGQSAAGRYRVQPIGSGGLR 61
Query 59 PRRGIDLTSNRALSEVLDEGLELNS 83
P G+DL+SN A++E +DEG+ +++
Sbjct 62 P--GVDLSSNAAVAEAMDEGVPVDA 84
>gi|297623625|ref|YP_003705059.1| CopG family transcriptional regulator [Truepera radiovictrix
DSM 17093]
gi|297164805|gb|ADI14516.1| transcriptional regulator, CopG family [Truepera radiovictrix
DSM 17093]
Length=82
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/79 (44%), Positives = 46/79 (59%), Gaps = 3/79 (3%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP--TVPVFDG-GT 57
MRTT+ + DE+L AKR A E Q+L AVIE+ALR A RP T V+ G
Sbjct 1 MRTTIRLDDELLREAKRLAAETNQTLTAVIEEALRERLARRKGARDRPPFTPKVYRGPAK 60
Query 58 GPRRGIDLTSNRALSEVLD 76
G + G+DL N AL ++++
Sbjct 61 GLQPGVDLDDNAALLDLME 79
>gi|160898240|ref|YP_001563822.1| antitoxin [Delftia acidovorans SPH-1]
gi|160363824|gb|ABX35437.1| conserved hypothetical protein, antitoxin [Delftia acidovorans
SPH-1]
Length=81
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/77 (36%), Positives = 42/77 (55%), Gaps = 0/77 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
M+TT+ ++D +L AK A ++ SL +IE+ L+ A R +PV+ G G
Sbjct 1 MKTTLDLNDALLTEAKTYAAQQHTSLTRLIEEGLQLRLRKAQAPARRVRLPVYHGKGGLA 60
Query 61 RGIDLTSNRALSEVLDE 77
G+D SNRAL + D+
Sbjct 61 PGLDALSNRALLDAADQ 77
>gi|337267946|ref|YP_004612001.1| hypothetical protein Mesop_3461 [Mesorhizobium opportunistum
WSM2075]
gi|336028256|gb|AEH87907.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
Length=87
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (54%), Gaps = 0/75 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTT++I D++L AAK AR++ +S+G VI D R+ GG R +P+
Sbjct 1 MRTTLAIDDDVLLAAKAMARQQDRSIGEVISDLARQSLRRPQAGGERNGIPLLSARPDDP 60
Query 61 RGIDLTSNRALSEVL 75
+DL AL + L
Sbjct 61 PLVDLEMINALRDAL 75
>gi|289441655|ref|ZP_06431399.1| antitoxin [Mycobacterium tuberculosis T46]
gi|289414574|gb|EFD11814.1| antitoxin [Mycobacterium tuberculosis T46]
Length=39
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/28 (79%), Positives = 23/28 (83%), Gaps = 0/28 (0%)
Query 26 LGAVIEDALRREFAAAHVGGARPTVPVF 53
+GAVIEDALRRE AAA GGARPTVP
Sbjct 1 MGAVIEDALRRELAAARTGGARPTVPFL 28
>gi|88812000|ref|ZP_01127253.1| hypothetical protein NB231_06406 [Nitrococcus mobilis Nb-231]
gi|88790884|gb|EAR21998.1| hypothetical protein NB231_06406 [Nitrococcus mobilis Nb-231]
Length=78
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (38%), Positives = 44/77 (58%), Gaps = 1/77 (1%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDG-GTGP 59
MRTT++I D++L AK +A G +L +IEDALR + R V + GTG
Sbjct 1 MRTTLNIDDQLLLRAKAQAAVSGVTLAQLIEDALRESLSRRERVEERGRVRIITAKGTGT 60
Query 60 RRGIDLTSNRALSEVLD 76
R GIDL + +L ++++
Sbjct 61 RPGIDLDHSPSLLDIME 77
>gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122 [Synechococcus sp. CB0205]
Length=86
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/48 (46%), Positives = 32/48 (67%), Gaps = 0/48 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP 48
MRTT+S+ D++LAAAK AR+R Q +G+VI + R+ A A+ P
Sbjct 8 MRTTLSLDDDVLAAAKVLARQRKQPIGSVISELARQGLAQANRQNPEP 55
>gi|15842141|ref|NP_337178.1| hypothetical protein MT2676 [Mycobacterium tuberculosis CDC1551]
gi|31793786|ref|NP_856279.1| hypothetical protein Mb2633 [Mycobacterium bovis AF2122/97]
gi|57117004|ref|YP_177673.1| hypothetical protein Rv2601A [Mycobacterium tuberculosis H37Rv]
74 more sequence titles
Length=95
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (29%), Positives = 45/88 (52%), Gaps = 5/88 (5%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT-----VPVFDG 55
M+TT+ + DE++ A K RA ++G+ + V+ + LR + H G PT +P+
Sbjct 1 MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC 60
Query 56 GTGPRRGIDLTSNRALSEVLDEGLELNS 83
G R ++T R + +LD+ + S
Sbjct 61 GGAATREQEMTPERVAAALLDQEAQWWS 88
>gi|344220429|gb|AEN01060.1| hypothetical protein MTCTRI2_2650 [Mycobacterium tuberculosis
CTRI-2]
Length=95
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT-----VPVFDG 55
M+TT+ + DE++ A K RA ++G+ + V+ + LR H G PT +P+
Sbjct 1 MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLFQTHSGAPIPTPRRVQLPLVHC 60
Query 56 GTGPRRGIDLTSNRALSEVLDEGLELNS 83
G R ++T R + +LD+ + S
Sbjct 61 GGAATREQEMTPERVAAALLDQEAQWWS 88
>gi|302542962|ref|ZP_07295304.1| hypothetical protein SSOG_03387 [Streptomyces hygroscopicus ATCC
53653]
gi|302460580|gb|EFL23673.1| hypothetical protein SSOG_03387 [Streptomyces himastatinicus
ATCC 53653]
Length=87
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (78%), Gaps = 0/35 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALR 35
M+TTV ISD +LA A+R ARE G +L A+IE+ LR
Sbjct 7 MKTTVEISDALLAEARRTAREEGTTLRALIEEGLR 41
>gi|306778586|ref|ZP_07416923.1| antitoxin [Mycobacterium tuberculosis SUMu002]
gi|306786609|ref|ZP_07424931.1| antitoxin [Mycobacterium tuberculosis SUMu003]
gi|306790975|ref|ZP_07429297.1| antitoxin [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=74
Score = 42.0 bits (97), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTT+ + D+IL A KRR RE ++LG + + L + AA P V + R
Sbjct 1 MRTTIDLDDDILRALKRRQREERKTLGQLASELLAQALAAEPP----PNVDICWSTADLR 56
Query 61 RGIDLTSNRALSEVLDEG 78
+DL A+ +LD G
Sbjct 57 PRVDLDDKDAVWAILDRG 74
>gi|340627619|ref|YP_004746071.1| hypothetical protein MCAN_26441 [Mycobacterium canettii CIPT
140010059]
gi|340005809|emb|CCC44975.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=95
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/88 (28%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT-----VPVFDG 55
M+TT+ + DE++ A K RA ++G+ + V+ + LR + H G PT +P+
Sbjct 1 MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC 60
Query 56 GTGPRRGIDLTSNRALSEVLDEGLELNS 83
R ++T R + +LD+ + S
Sbjct 61 SGATTREQEMTPERVAAALLDQEAQWWS 88
>gi|15843316|ref|NP_338353.1| CopG family DNA-binding protein [Mycobacterium tuberculosis CDC1551]
gi|121639612|ref|YP_979836.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663561|ref|YP_001285084.1| hypothetical protein MRA_3733 [Mycobacterium tuberculosis H37Ra]
48 more sequence titles
Length=74
Score = 40.8 bits (94), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
MRTT+ + D+IL A KRR RE ++LG + + L + AA P V + R
Sbjct 1 MRTTIDLDDDILRALKRRQREERKTLGQLASELLAQALAAEPP----PNVDIRWSTADLR 56
Query 61 RGIDLTSNRALSEVLDEG 78
+DL A+ +LD G
Sbjct 57 PRVDLDDKDAVWAILDRG 74
>gi|296130775|ref|YP_003638025.1| putative transcriptional regulator, CopG family [Cellulomonas
flavigena DSM 20109]
gi|296022590|gb|ADG75826.1| putative transcriptional regulator, CopG family [Cellulomonas
flavigena DSM 20109]
Length=83
Score = 40.4 bits (93), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/79 (37%), Positives = 41/79 (52%), Gaps = 5/79 (6%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTV---PVFDGGT 57
MRTT+ + DE+ K A G+++ +V+EDALR E RP V GG
Sbjct 5 MRTTLHLPDELYREVKAAAARSGRTVTSVVEDALRAELERFRATAERPPFRIDAVGSGGL 64
Query 58 GPRRGIDLTSNRALSEVLD 76
P G+DL + AL +VL+
Sbjct 65 LP--GVDLDDSAALLDVLE 81
>gi|16264147|ref|NP_436939.1| hypothetical protein SM_b20413 [Sinorhizobium meliloti 1021]
gi|334319719|ref|YP_004556348.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
gi|15140272|emb|CAC48799.1| HYPOTHETICAL PROTEIN SM_b20413 [Sinorhizobium meliloti 1021]
gi|333815878|gb|AEG08545.1| hypothetical protein SinmeB_4262 [Sinorhizobium meliloti BL225C]
gi|334097458|gb|AEG55468.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
Length=75
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/53 (40%), Positives = 32/53 (61%), Gaps = 0/53 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVF 53
MRTT++I D++L AAK A ++ +S+G VI + RR GG R +P+
Sbjct 1 MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSLRRPRSGGERNGIPLL 53
>gi|336038110|gb|AEH84040.1| hypothetical protein SM11_pD1208 [Sinorhizobium meliloti SM11]
Length=75
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/53 (40%), Positives = 32/53 (61%), Gaps = 0/53 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVF 53
MRTT++I D++L AAK A ++ +S+G VI + RR GG R +P+
Sbjct 1 MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSLRRPRSGGERNGIPLL 53
>gi|289573180|ref|ZP_06453407.1| antitoxin [Mycobacterium tuberculosis K85]
gi|289537611|gb|EFD42189.1| antitoxin [Mycobacterium tuberculosis K85]
Length=71
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/47 (49%), Positives = 31/47 (66%), Gaps = 5/47 (10%)
Query 2 RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP 48
+TTV + DE+ AA KR AR+RG S VI +++R A VGGA+P
Sbjct 3 KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIR-----AAVGGAKP 44
>gi|206601847|gb|EDZ38330.1| Hypothetical protein CGL2_11278039 [Leptospirillum sp. Group
II '5-way CG']
Length=152
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/72 (38%), Positives = 42/72 (59%), Gaps = 5/72 (6%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGG---ARPTVPVFDGGT 57
MRTT+ I +++L A+ AR +G+S+G VI D R+ A + G + TV VF
Sbjct 73 MRTTLDIDEDVLETARELARRQGKSIGKVISDLGRQ--ALMEMSGRDLSSETVSVFGFRP 130
Query 58 GPRRGIDLTSNR 69
P+RG +T++R
Sbjct 131 FPKRGGVVTNDR 142
>gi|15607721|ref|NP_215095.1| hypothetical protein Rv0581 [Mycobacterium tuberculosis H37Rv]
gi|31791763|ref|NP_854256.1| hypothetical protein Mb0596 [Mycobacterium bovis AF2122/97]
gi|121636499|ref|YP_976722.1| hypothetical protein BCG_0626 [Mycobacterium bovis BCG str. Pasteur
1173P2]
68 more sequence titles
Length=71
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/47 (49%), Positives = 31/47 (66%), Gaps = 5/47 (10%)
Query 2 RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP 48
+TTV + DE+ AA KR AR+RG S VI +++R A VGGA+P
Sbjct 3 KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIR-----AAVGGAKP 44
>gi|344199816|ref|YP_004784142.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans
SS3]
gi|343775260|gb|AEM47816.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans
SS3]
Length=77
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/57 (39%), Positives = 33/57 (58%), Gaps = 5/57 (8%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGAR-----PTVPV 52
MRTT++I D++LAAAK A + +S+GAV+ LR+ + G P +PV
Sbjct 1 MRTTLAIDDDVLAAAKGLADRQHKSVGAVVSALLRQALQPQNTSGGHSRNGIPLLPV 57
>gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Synechococcus sp. CC9311]
gi|113881940|gb|ABI46898.1| conserved hypothetical protein [Synechococcus sp. CC9311]
Length=81
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/65 (37%), Positives = 37/65 (57%), Gaps = 9/65 (13%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGAR---------PTVP 51
MRTT+ + D++LAAA+ AR+R +S+G VI D R+ + GG++ P +P
Sbjct 1 MRTTLRLDDDVLAAARVLARQRRRSVGDVISDLARQTLSRPADGGSQNVLEQRSGLPQLP 60
Query 52 VFDGG 56
V G
Sbjct 61 VKASG 65
>gi|289446134|ref|ZP_06435878.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
gi|289419092|gb|EFD16293.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
Length=71
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (66%), Gaps = 5/46 (10%)
Query 3 TTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP 48
TTV + DE+ AA KR AR+RG S VI +++R A VGGA+P
Sbjct 4 TTVYLPDELKAAVKRAARQRGVSEAQVIRESIR-----AAVGGAKP 44
>gi|304413693|ref|ZP_07395137.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola
LSR1]
gi|304283784|gb|EFL92178.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola
LSR1]
Length=82
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/43 (54%), Positives = 29/43 (68%), Gaps = 3/43 (6%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHV 43
MRTT++I D+ILAAAK A + +SLGAVI R+ A HV
Sbjct 9 MRTTLAIDDDILAAAKGLAARQNKSLGAVISSLARQ---ALHV 48
>gi|167969003|ref|ZP_02551280.1| hypothetical protein MtubH3_13632 [Mycobacterium tuberculosis
H37Ra]
Length=71
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/47 (47%), Positives = 31/47 (66%), Gaps = 5/47 (10%)
Query 2 RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP 48
+TTV + DE+ A+ KR AR+RG S VI +++R A VGGA+P
Sbjct 3 KTTVYLPDELKASVKRAARQRGVSEAQVIRESIR-----AAVGGAKP 44
>gi|254363539|ref|ZP_04979585.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|134149053|gb|EBA41098.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
Length=71
Score = 38.5 bits (88), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/47 (52%), Positives = 29/47 (62%), Gaps = 5/47 (10%)
Query 2 RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP 48
+TTV + DE+ AA KR AR+RG S VI RE A VGGA+P
Sbjct 3 KTTVYLPDELKAAVKRAARQRGVSEAQVI-----RESIWAAVGGAKP 44
>gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240862973|gb|ACS60637.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length=75
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/53 (38%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVF 53
MRTT++I D++L AAK A ++ +S+G VI + RR G R +P+
Sbjct 1 MRTTLAIDDDVLTAAKAMATQQHRSVGEVISELARRSLRRPPSSGERNGIPLL 53
>gi|56478773|ref|YP_160362.1| hypothetical protein ebA5867 [Aromatoleum aromaticum EbN1]
gi|56314816|emb|CAI09461.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length=81
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/58 (45%), Positives = 34/58 (59%), Gaps = 4/58 (6%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGAR--PTVPVFD 54
MRTT+ I ++LAAAK AR++ S+G VI +RR AAA R P VP F+
Sbjct 1 MRTTLDIESDVLAAAKEIARQQHTSVGKVISQLVRRTLIGAAAPQTVVRQTPAVPGFE 58
>gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
gi|86168995|gb|EAQ70251.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
Length=82
Score = 38.1 bits (87), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/86 (37%), Positives = 41/86 (48%), Gaps = 9/86 (10%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHV----GGARPTVPVFDGG 56
MRTT+ I D++L AAK A+++ S G V+ LR+ AH ARP F
Sbjct 1 MRTTLDIDDDLLQAAKDLAKQQRMSAGQVVSTLLRQALTQAHHSPSEAAARPHPCGFRPF 60
Query 57 TG-PRRGIDLTSNRALSEVLDEGLEL 81
G P R +N A E L + L L
Sbjct 61 AGDPSR----ITNNADVEALRDALNL 82
>gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycobacterium tuberculosis CDC1551]
gi|31793712|ref|NP_856205.1| hypothetical protein Mb2559Ac [Mycobacterium bovis AF2122/97]
gi|57116999|ref|YP_177672.1| hypothetical protein Rv2530A [Mycobacterium tuberculosis H37Rv]
68 more sequence titles
Length=74
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/57 (43%), Positives = 31/57 (55%), Gaps = 7/57 (12%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF---AAAHVGGARPTVPVFD 54
MRTT+ I D++L A+ AR G+S+GAVI + RR V G PVFD
Sbjct 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDG----FPVFD 53
>gi|258593475|emb|CBE69814.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=75
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/56 (33%), Positives = 30/56 (54%), Gaps = 0/56 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGG 56
M+TT++I D ++ KR A +G+++ ++E ALR A P +P F G
Sbjct 1 MKTTLNIDDSVMVLLKREAARQGRTMSELVESALRLMLRAQRRRSGLPPLPTFRSG 56
>gi|340358884|ref|ZP_08681387.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon
448 str. F0400]
gi|339885630|gb|EGQ75339.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon
448 str. F0400]
Length=77
Score = 37.7 bits (86), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/54 (47%), Positives = 31/54 (58%), Gaps = 2/54 (3%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIED-ALRREFAAAHVGGARPTVPVF 53
MRTT+ I D +LA A+ +AR G SLG + D ALR G+R VPVF
Sbjct 1 MRTTLDIDDSVLAVAREKARREGLSLGRAVSDYALRGIRGGGPDAGSR-GVPVF 53
>gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_03168 [Rhizobium etli Kim 5]
Length=63
Score = 37.7 bits (86), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/53 (38%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVF 53
MRTT++I D++L AAK A ++ +S+G VI + RR G R +P+
Sbjct 7 MRTTLAIDDDVLIAAKAMATQQHRSVGEVISELARRSLRRPPSSGERNGIPLL 59
>gi|340625611|ref|YP_004744063.1| hypothetical protein MCAN_05871 [Mycobacterium canettii CIPT
140010059]
gi|340003801|emb|CCC42927.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=71
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/47 (47%), Positives = 30/47 (64%), Gaps = 5/47 (10%)
Query 2 RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP 48
+TTV + DE+ AA K AR+RG S VI +++R A VGGA+P
Sbjct 3 KTTVYLPDELKAAVKHAARQRGVSEAEVIRESIR-----AAVGGAKP 44
>gi|258593409|emb|CBE69748.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=81
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/78 (31%), Positives = 41/78 (53%), Gaps = 0/78 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR 60
M+TT+ ++D +L A++ A G +L A++E+ LRR A GG G+G +
Sbjct 1 MKTTIEVTDTLLRDARQLAANEGTTLRALVEEGLRRILAEREQGGRFHLRKATFKGSGLQ 60
Query 61 RGIDLTSNRALSEVLDEG 78
G+ S + E++ EG
Sbjct 61 PGLTTASWDRIREMIYEG 78
>gi|116748339|ref|YP_845026.1| hypothetical protein Sfum_0895 [Syntrophobacter fumaroxidans
MPOB]
gi|116697403|gb|ABK16591.1| conserved hypothetical protein [Syntrophobacter fumaroxidans
MPOB]
Length=88
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/48 (44%), Positives = 27/48 (57%), Gaps = 0/48 (0%)
Query 1 MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP 48
MRTT++I DEI + K A G+S V+ DALR+ A ARP
Sbjct 1 MRTTLTIDDEIAVSLKDLAHRSGKSFRQVVNDALRKGAHALENPEARP 48
Lambda K H
0.316 0.133 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131466506940
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40