BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0748

Length=85
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15840161|ref|NP_335198.1|  hypothetical protein MT0772.6 [Myco...   167    6e-40
gi|15607888|ref|NP_215262.1|  hypothetical protein Rv0748 [Mycoba...   167    7e-40
gi|289749257|ref|ZP_06508635.1|  conserved hypothetical protein [...   165    2e-39
gi|289573366|ref|ZP_06453593.1|  antitoxin [Mycobacterium tubercu...   163    7e-39
gi|121636191|ref|YP_976414.1|  antitoxin [Mycobacterium bovis BCG...   150    7e-35
gi|332321844|sp|P0CW33.1|VPB25_MYCTU  RecName: Full=Antitoxin VapB25   148    3e-34
gi|289748048|ref|ZP_06507426.1|  conserved hypothetical protein [...   139    2e-31
gi|289568188|ref|ZP_06448415.1|  conserved hypothetical protein [...   106    1e-21
gi|254549713|ref|ZP_05140160.1|  hypothetical protein Mtube_04496...   106    1e-21
gi|148660043|ref|YP_001281566.1|  hypothetical protein MRA_0286 [...   104    5e-21
gi|289445811|ref|ZP_06435555.1|  antitoxin [Mycobacterium tubercu...   100    6e-20
gi|15839659|ref|NP_334696.1|  hypothetical protein MT0290 [Mycoba...  98.6    2e-19
gi|157382509|gb|ABV48745.1|  Rv2871 [Mycobacterium kansasii ATCC ...  52.8    2e-05
gi|254551940|ref|ZP_05142387.1|  antitoxin [Mycobacterium tubercu...  52.4    2e-05
gi|15610008|ref|NP_217387.1|  hypothetical protein Rv2871 [Mycoba...  52.0    3e-05
gi|240171735|ref|ZP_04750394.1|  hypothetical protein MkanA1_2064...  50.8    6e-05
gi|297623625|ref|YP_003705059.1|  CopG family transcriptional reg...  50.4    9e-05
gi|160898240|ref|YP_001563822.1|  antitoxin [Delftia acidovorans ...  47.4    7e-04
gi|337267946|ref|YP_004612001.1|  hypothetical protein Mesop_3461...  46.6    0.001
gi|289441655|ref|ZP_06431399.1|  antitoxin [Mycobacterium tubercu...  46.6    0.001
gi|88812000|ref|ZP_01127253.1|  hypothetical protein NB231_06406 ...  45.4    0.003
gi|317967918|ref|ZP_07969308.1|  hypothetical protein SCB02_00122...  43.9    0.008
gi|15842141|ref|NP_337178.1|  hypothetical protein MT2676 [Mycoba...  43.5    0.012
gi|344220429|gb|AEN01060.1|  hypothetical protein MTCTRI2_2650 [M...  42.4    0.024
gi|302542962|ref|ZP_07295304.1|  hypothetical protein SSOG_03387 ...  42.0    0.028
gi|306778586|ref|ZP_07416923.1|  antitoxin [Mycobacterium tubercu...  42.0    0.033
gi|340627619|ref|YP_004746071.1|  hypothetical protein MCAN_26441...  41.2    0.048
gi|15843316|ref|NP_338353.1|  CopG family DNA-binding protein [My...  40.8    0.075
gi|296130775|ref|YP_003638025.1|  putative transcriptional regula...  40.4    0.095
gi|16264147|ref|NP_436939.1|  hypothetical protein SM_b20413 [Sin...  40.0    0.10 
gi|336038110|gb|AEH84040.1|  hypothetical protein SM11_pD1208 [Si...  40.0    0.11 
gi|289573180|ref|ZP_06453407.1|  antitoxin [Mycobacterium tubercu...  39.7    0.15 
gi|206601847|gb|EDZ38330.1|  Hypothetical protein CGL2_11278039 [...  39.7    0.16 
gi|15607721|ref|NP_215095.1|  hypothetical protein Rv0581 [Mycoba...  39.7    0.17 
gi|344199816|ref|YP_004784142.1|  hypothetical protein Acife_1683...  38.9    0.25 
gi|113954589|ref|YP_729373.1|  hypothetical protein sync_0136 [Sy...  38.9    0.27 
gi|289446134|ref|ZP_06435878.1|  antitoxin [Mycobacterium tubercu...  38.9    0.27 
gi|304413693|ref|ZP_07395137.1|  hypothetical protein REG_0768 [C...  38.5    0.35 
gi|167969003|ref|ZP_02551280.1|  hypothetical protein MtubH3_1363...  38.5    0.35 
gi|254363539|ref|ZP_04979585.1|  conserved hypothetical protein [...  38.5    0.37 
gi|241518560|ref|YP_002979188.1|  hypothetical protein Rleg_5863 ...  38.1    0.40 
gi|56478773|ref|YP_160362.1|  hypothetical protein ebA5867 [Aroma...  38.1    0.44 
gi|87123275|ref|ZP_01079126.1|  hypothetical protein RS9917_05430...  38.1    0.50 
gi|15842065|ref|NP_337102.1|  hypothetical protein MT2606 [Mycoba...  37.7    0.53 
gi|258593475|emb|CBE69814.1|  conserved protein of unknown functi...  37.7    0.55 
gi|340358884|ref|ZP_08681387.1|  hypothetical protein HMPREF9062_...  37.7    0.61 
gi|218458497|ref|ZP_03498588.1|  hypothetical protein RetlK5_0316...  37.7    0.61 
gi|340625611|ref|YP_004744063.1|  hypothetical protein MCAN_05871...  37.4    0.73 
gi|258593409|emb|CBE69748.1|  conserved protein of unknown functi...  37.0    0.86 
gi|116748339|ref|YP_845026.1|  hypothetical protein Sfum_0895 [Sy...  37.0    1.0  


>gi|15840161|ref|NP_335198.1| hypothetical protein MT0772.6 [Mycobacterium tuberculosis CDC1551]
 gi|13880314|gb|AAK45012.1| hypothetical protein MT0772.6 [Mycobacterium tuberculosis CDC1551]
Length=88

 Score =  167 bits (422),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR
Sbjct  4   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  63

Query  61  RGIDLTSNRALSEVLDEGLELNSRK  85
           RGIDLTSNRALSEVLDEGLELNSRK
Sbjct  64  RGIDLTSNRALSEVLDEGLELNSRK  88


>gi|15607888|ref|NP_215262.1| hypothetical protein Rv0748 [Mycobacterium tuberculosis H37Rv]
 gi|31791934|ref|NP_854427.1| hypothetical protein Mb0769 [Mycobacterium bovis AF2122/97]
 gi|121636670|ref|YP_976893.1| hypothetical protein BCG_0798 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 59 more sequence titles
 Length=85

 Score =  167 bits (422),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR
Sbjct  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60

Query  61  RGIDLTSNRALSEVLDEGLELNSRK  85
           RGIDLTSNRALSEVLDEGLELNSRK
Sbjct  61  RGIDLTSNRALSEVLDEGLELNSRK  85


>gi|289749257|ref|ZP_06508635.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689844|gb|EFD57273.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=85

 Score =  165 bits (417),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 84/85 (99%), Positives = 84/85 (99%), Gaps = 0/85 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR
Sbjct  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60

Query  61  RGIDLTSNRALSEVLDEGLELNSRK  85
           RGIDLTSNR LSEVLDEGLELNSRK
Sbjct  61  RGIDLTSNRVLSEVLDEGLELNSRK  85


>gi|289573366|ref|ZP_06453593.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|339630816|ref|YP_004722458.1| hypothetical protein MAF_07580 [Mycobacterium africanum GM041182]
 gi|289537797|gb|EFD42375.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|339330172|emb|CCC25830.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=85

 Score =  163 bits (413),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 84/85 (99%), Positives = 84/85 (99%), Gaps = 0/85 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT PVFDGGTGPR
Sbjct  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTGPVFDGGTGPR  60

Query  61  RGIDLTSNRALSEVLDEGLELNSRK  85
           RGIDLTSNRALSEVLDEGLELNSRK
Sbjct  61  RGIDLTSNRALSEVLDEGLELNSRK  85


>gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224988664|ref|YP_002643351.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|121491838|emb|CAL70300.1| Conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|224771777|dbj|BAH24583.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|341600207|emb|CCC62876.1| conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Moreau RDJ]
Length=85

 Score =  150 bits (379),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 77/85 (91%), Positives = 78/85 (92%), Gaps = 0/85 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTTVSISDE+LA AKRRARERGQSLGAVIEDALRRE AAA  GGARPTVPVFD GTGPR
Sbjct  1   MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPTVPVFDAGTGPR  60

Query  61  RGIDLTSNRALSEVLDEGLELNSRK  85
            GIDLTSNR LSEVLDEGLELNSRK
Sbjct  61  PGIDLTSNRVLSEVLDEGLELNSRK  85


>gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25
Length=85

 Score =  148 bits (373),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 76/85 (90%), Positives = 77/85 (91%), Gaps = 0/85 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTTVSISDE+LA AKRRARERGQSLGAVIEDALRRE AAA  GGARPTVPVFD GTGPR
Sbjct  1   MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPTVPVFDAGTGPR  60

Query  61  RGIDLTSNRALSEVLDEGLELNSRK  85
            GIDLTSN  LSEVLDEGLELNSRK
Sbjct  61  PGIDLTSNTVLSEVLDEGLELNSRK  85


>gi|289748048|ref|ZP_06507426.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289688576|gb|EFD56064.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=88

 Score =  139 bits (349),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 81/85 (96%), Positives = 81/85 (96%), Gaps = 0/85 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFD GTGPR
Sbjct  4   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDAGTGPR  63

Query  61  RGIDLTSNRALSEVLDEGLELNSRK  85
            GIDLTSN  LSEVLDEGLELNSRK
Sbjct  64  PGIDLTSNTVLSEVLDEGLELNSRK  88


>gi|289568188|ref|ZP_06448415.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289572856|ref|ZP_06453083.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289748759|ref|ZP_06508137.1| antitoxin [Mycobacterium tuberculosis T92]
 gi|289537287|gb|EFD41865.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289541941|gb|EFD45590.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289689346|gb|EFD56775.1| antitoxin [Mycobacterium tuberculosis T92]
Length=60

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 53/60 (89%), Positives = 54/60 (90%), Gaps = 0/60 (0%)

Query  26  LGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK  85
           +GAVIEDALRRE AAA  GGARPTVPVFD GTGPR GIDLTSNR LSEVLDEGLELNSRK
Sbjct  1   MGAVIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNRVLSEVLDEGLELNSRK  60


>gi|254549713|ref|ZP_05140160.1| hypothetical protein Mtube_04496 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=82

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 70/82 (86%), Positives = 71/82 (87%), Gaps = 1/82 (1%)

Query  5   VSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR-RGI  63
           +SISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGA P  P F      R RGI
Sbjct  1   MSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGASPDRPDFSTAVPVRGRGI  60

Query  64  DLTSNRALSEVLDEGLELNSRK  85
           DLTSNRALSEVLDEGLELNSRK
Sbjct  61  DLTSNRALSEVLDEGLELNSRK  82


>gi|148660043|ref|YP_001281566.1| hypothetical protein MRA_0286 [Mycobacterium tuberculosis H37Ra]
 gi|289552531|ref|ZP_06441741.1| antitoxin [Mycobacterium tuberculosis KZN 605]
 gi|148504195|gb|ABQ72004.1| hypothetical protein MRA_0286 [Mycobacterium tuberculosis H37Ra]
 gi|289437163|gb|EFD19656.1| antitoxin [Mycobacterium tuberculosis KZN 605]
Length=60

 Score =  104 bits (259),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 52/60 (87%), Positives = 53/60 (89%), Gaps = 0/60 (0%)

Query  26  LGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK  85
           +GAVIEDALRRE AAA  GGARPTVPVFD GTGPR GIDLTSN  LSEVLDEGLELNSRK
Sbjct  1   MGAVIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNTVLSEVLDEGLELNSRK  60


>gi|289445811|ref|ZP_06435555.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289418769|gb|EFD15970.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
Length=57

 Score =  100 bits (250),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 50/57 (88%), Positives = 51/57 (90%), Gaps = 0/57 (0%)

Query  29  VIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK  85
           +IEDALRRE AAA  GGARPTVPVFD GTGPR GIDLTSNR LSEVLDEGLELNSRK
Sbjct  1   MIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNRVLSEVLDEGLELNSRK  57


>gi|15839659|ref|NP_334696.1| hypothetical protein MT0290 [Mycobacterium tuberculosis CDC1551]
 gi|148821473|ref|YP_001286227.1| hypothetical protein TBFG_10282 [Mycobacterium tuberculosis F11]
 gi|167968999|ref|ZP_02551276.1| hypothetical protein MtubH3_13612 [Mycobacterium tuberculosis 
H37Ra]
 15 more sequence titles
 Length=57

 Score = 98.6 bits (244),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 49/57 (86%), Positives = 50/57 (88%), Gaps = 0/57 (0%)

Query  29  VIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK  85
           +IEDALRRE AAA  GGARPTVPVFD GTGPR GIDLTSN  LSEVLDEGLELNSRK
Sbjct  1   MIEDALRRELAAARTGGARPTVPVFDAGTGPRPGIDLTSNTVLSEVLDEGLELNSRK  57


>gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC 12478]
Length=85

 Score = 52.8 bits (125),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 32/85 (38%), Positives = 49/85 (58%), Gaps = 4/85 (4%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGARPTVPVFDGGTG  58
           MRTT+ I DE+    K RA   G+++ AV+EDA+R           G     P+  GG  
Sbjct  1   MRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGLNPPGQSAAGRYRVQPIGSGGLR  60

Query  59  PRRGIDLTSNRALSEVLDEGLELNS  83
           P  G+DL+SN A++E +DEG+ +++
Sbjct  61  P--GVDLSSNAAVAEAMDEGVPVDA  83


>gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=85

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 31/85 (37%), Positives = 49/85 (58%), Gaps = 4/85 (4%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGARPTVPVFDGGTG  58
           MRTT+ I DE+    K +A   G+++ AV+EDA+RR          G     P   GG  
Sbjct  1   MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGMR  60

Query  59  PRRGIDLTSNRALSEVLDEGLELNS  83
           P  G+DL+SN AL+E +++G+ +++
Sbjct  61  P--GVDLSSNAALAEAMNDGVSVDA  83


>gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycobacterium tuberculosis H37Rv]
 gi|31794048|ref|NP_856541.1| hypothetical protein Mb2896 [Mycobacterium bovis AF2122/97]
 gi|121638753|ref|YP_978977.1| hypothetical protein BCG_2893 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 73 more sequence titles
 Length=85

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 31/85 (37%), Positives = 49/85 (58%), Gaps = 4/85 (4%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGARPTVPVFDGGTG  58
           MRTT+ I DE+    K +A   G+++ AV+EDA+RR          G     P   GG  
Sbjct  1   MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGLR  60

Query  59  PRRGIDLTSNRALSEVLDEGLELNS  83
           P  G+DL+SN AL+E +++G+ +++
Sbjct  61  P--GVDLSSNAALAEAMNDGVSVDA  83


>gi|240171735|ref|ZP_04750394.1| hypothetical protein MkanA1_20645 [Mycobacterium kansasii ATCC 
12478]
Length=86

 Score = 50.8 bits (120),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 31/85 (37%), Positives = 49/85 (58%), Gaps = 4/85 (4%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGARPTVPVFDGGTG  58
           +RTT+ I DE+    K RA   G+++ AV+EDA+R           G     P+  GG  
Sbjct  2   VRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGLNPPGQSAAGRYRVQPIGSGGLR  61

Query  59  PRRGIDLTSNRALSEVLDEGLELNS  83
           P  G+DL+SN A++E +DEG+ +++
Sbjct  62  P--GVDLSSNAAVAEAMDEGVPVDA  84


>gi|297623625|ref|YP_003705059.1| CopG family transcriptional regulator [Truepera radiovictrix 
DSM 17093]
 gi|297164805|gb|ADI14516.1| transcriptional regulator, CopG family [Truepera radiovictrix 
DSM 17093]
Length=82

 Score = 50.4 bits (119),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 34/79 (44%), Positives = 46/79 (59%), Gaps = 3/79 (3%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP--TVPVFDG-GT  57
           MRTT+ + DE+L  AKR A E  Q+L AVIE+ALR   A       RP  T  V+ G   
Sbjct  1   MRTTIRLDDELLREAKRLAAETNQTLTAVIEEALRERLARRKGARDRPPFTPKVYRGPAK  60

Query  58  GPRRGIDLTSNRALSEVLD  76
           G + G+DL  N AL ++++
Sbjct  61  GLQPGVDLDDNAALLDLME  79


>gi|160898240|ref|YP_001563822.1| antitoxin [Delftia acidovorans SPH-1]
 gi|160363824|gb|ABX35437.1| conserved hypothetical protein, antitoxin [Delftia acidovorans 
SPH-1]
Length=81

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 27/77 (36%), Positives = 42/77 (55%), Gaps = 0/77 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           M+TT+ ++D +L  AK  A ++  SL  +IE+ L+     A     R  +PV+ G  G  
Sbjct  1   MKTTLDLNDALLTEAKTYAAQQHTSLTRLIEEGLQLRLRKAQAPARRVRLPVYHGKGGLA  60

Query  61  RGIDLTSNRALSEVLDE  77
            G+D  SNRAL +  D+
Sbjct  61  PGLDALSNRALLDAADQ  77


>gi|337267946|ref|YP_004612001.1| hypothetical protein Mesop_3461 [Mesorhizobium opportunistum 
WSM2075]
 gi|336028256|gb|AEH87907.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
Length=87

 Score = 46.6 bits (109),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (54%), Gaps = 0/75 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTT++I D++L AAK  AR++ +S+G VI D  R+       GG R  +P+        
Sbjct  1   MRTTLAIDDDVLLAAKAMARQQDRSIGEVISDLARQSLRRPQAGGERNGIPLLSARPDDP  60

Query  61  RGIDLTSNRALSEVL  75
             +DL    AL + L
Sbjct  61  PLVDLEMINALRDAL  75


>gi|289441655|ref|ZP_06431399.1| antitoxin [Mycobacterium tuberculosis T46]
 gi|289414574|gb|EFD11814.1| antitoxin [Mycobacterium tuberculosis T46]
Length=39

 Score = 46.6 bits (109),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 22/28 (79%), Positives = 23/28 (83%), Gaps = 0/28 (0%)

Query  26  LGAVIEDALRREFAAAHVGGARPTVPVF  53
           +GAVIEDALRRE AAA  GGARPTVP  
Sbjct  1   MGAVIEDALRRELAAARTGGARPTVPFL  28


>gi|88812000|ref|ZP_01127253.1| hypothetical protein NB231_06406 [Nitrococcus mobilis Nb-231]
 gi|88790884|gb|EAR21998.1| hypothetical protein NB231_06406 [Nitrococcus mobilis Nb-231]
Length=78

 Score = 45.4 bits (106),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 29/77 (38%), Positives = 44/77 (58%), Gaps = 1/77 (1%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDG-GTGP  59
           MRTT++I D++L  AK +A   G +L  +IEDALR   +       R  V +    GTG 
Sbjct  1   MRTTLNIDDQLLLRAKAQAAVSGVTLAQLIEDALRESLSRRERVEERGRVRIITAKGTGT  60

Query  60  RRGIDLTSNRALSEVLD  76
           R GIDL  + +L ++++
Sbjct  61  RPGIDLDHSPSLLDIME  77


>gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122 [Synechococcus sp. CB0205]
Length=86

 Score = 43.9 bits (102),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 22/48 (46%), Positives = 32/48 (67%), Gaps = 0/48 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP  48
           MRTT+S+ D++LAAAK  AR+R Q +G+VI +  R+  A A+     P
Sbjct  8   MRTTLSLDDDVLAAAKVLARQRKQPIGSVISELARQGLAQANRQNPEP  55


>gi|15842141|ref|NP_337178.1| hypothetical protein MT2676 [Mycobacterium tuberculosis CDC1551]
 gi|31793786|ref|NP_856279.1| hypothetical protein Mb2633 [Mycobacterium bovis AF2122/97]
 gi|57117004|ref|YP_177673.1| hypothetical protein Rv2601A [Mycobacterium tuberculosis H37Rv]
 74 more sequence titles
 Length=95

 Score = 43.5 bits (101),  Expect = 0.012, Method: Compositional matrix adjust.
 Identities = 25/88 (29%), Positives = 45/88 (52%), Gaps = 5/88 (5%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT-----VPVFDG  55
           M+TT+ + DE++ A K RA ++G+ +  V+ + LR   +  H G   PT     +P+   
Sbjct  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60

Query  56  GTGPRRGIDLTSNRALSEVLDEGLELNS  83
           G    R  ++T  R  + +LD+  +  S
Sbjct  61  GGAATREQEMTPERVAAALLDQEAQWWS  88


>gi|344220429|gb|AEN01060.1| hypothetical protein MTCTRI2_2650 [Mycobacterium tuberculosis 
CTRI-2]
Length=95

 Score = 42.4 bits (98),  Expect = 0.024, Method: Compositional matrix adjust.
 Identities = 25/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT-----VPVFDG  55
           M+TT+ + DE++ A K RA ++G+ +  V+ + LR      H G   PT     +P+   
Sbjct  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLFQTHSGAPIPTPRRVQLPLVHC  60

Query  56  GTGPRRGIDLTSNRALSEVLDEGLELNS  83
           G    R  ++T  R  + +LD+  +  S
Sbjct  61  GGAATREQEMTPERVAAALLDQEAQWWS  88


>gi|302542962|ref|ZP_07295304.1| hypothetical protein SSOG_03387 [Streptomyces hygroscopicus ATCC 
53653]
 gi|302460580|gb|EFL23673.1| hypothetical protein SSOG_03387 [Streptomyces himastatinicus 
ATCC 53653]
Length=87

 Score = 42.0 bits (97),  Expect = 0.028, Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (78%), Gaps = 0/35 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALR  35
           M+TTV ISD +LA A+R ARE G +L A+IE+ LR
Sbjct  7   MKTTVEISDALLAEARRTAREEGTTLRALIEEGLR  41


>gi|306778586|ref|ZP_07416923.1| antitoxin [Mycobacterium tuberculosis SUMu002]
 gi|306786609|ref|ZP_07424931.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|306790975|ref|ZP_07429297.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 Length=74

 Score = 42.0 bits (97),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 27/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTT+ + D+IL A KRR RE  ++LG +  + L +  AA       P V +       R
Sbjct  1   MRTTIDLDDDILRALKRRQREERKTLGQLASELLAQALAAEPP----PNVDICWSTADLR  56

Query  61  RGIDLTSNRALSEVLDEG  78
             +DL    A+  +LD G
Sbjct  57  PRVDLDDKDAVWAILDRG  74


>gi|340627619|ref|YP_004746071.1| hypothetical protein MCAN_26441 [Mycobacterium canettii CIPT 
140010059]
 gi|340005809|emb|CCC44975.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=95

 Score = 41.2 bits (95),  Expect = 0.048, Method: Compositional matrix adjust.
 Identities = 24/88 (28%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT-----VPVFDG  55
           M+TT+ + DE++ A K RA ++G+ +  V+ + LR   +  H G   PT     +P+   
Sbjct  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60

Query  56  GTGPRRGIDLTSNRALSEVLDEGLELNS  83
                R  ++T  R  + +LD+  +  S
Sbjct  61  SGATTREQEMTPERVAAALLDQEAQWWS  88


>gi|15843316|ref|NP_338353.1| CopG family DNA-binding protein [Mycobacterium tuberculosis CDC1551]
 gi|121639612|ref|YP_979836.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663561|ref|YP_001285084.1| hypothetical protein MRA_3733 [Mycobacterium tuberculosis H37Ra]
 48 more sequence titles
 Length=74

 Score = 40.8 bits (94),  Expect = 0.075, Method: Compositional matrix adjust.
 Identities = 27/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           MRTT+ + D+IL A KRR RE  ++LG +  + L +  AA       P V +       R
Sbjct  1   MRTTIDLDDDILRALKRRQREERKTLGQLASELLAQALAAEPP----PNVDIRWSTADLR  56

Query  61  RGIDLTSNRALSEVLDEG  78
             +DL    A+  +LD G
Sbjct  57  PRVDLDDKDAVWAILDRG  74


>gi|296130775|ref|YP_003638025.1| putative transcriptional regulator, CopG family [Cellulomonas 
flavigena DSM 20109]
 gi|296022590|gb|ADG75826.1| putative transcriptional regulator, CopG family [Cellulomonas 
flavigena DSM 20109]
Length=83

 Score = 40.4 bits (93),  Expect = 0.095, Method: Compositional matrix adjust.
 Identities = 29/79 (37%), Positives = 41/79 (52%), Gaps = 5/79 (6%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTV---PVFDGGT  57
           MRTT+ + DE+    K  A   G+++ +V+EDALR E         RP      V  GG 
Sbjct  5   MRTTLHLPDELYREVKAAAARSGRTVTSVVEDALRAELERFRATAERPPFRIDAVGSGGL  64

Query  58  GPRRGIDLTSNRALSEVLD  76
            P  G+DL  + AL +VL+
Sbjct  65  LP--GVDLDDSAALLDVLE  81


>gi|16264147|ref|NP_436939.1| hypothetical protein SM_b20413 [Sinorhizobium meliloti 1021]
 gi|334319719|ref|YP_004556348.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
 gi|15140272|emb|CAC48799.1| HYPOTHETICAL PROTEIN SM_b20413 [Sinorhizobium meliloti 1021]
 gi|333815878|gb|AEG08545.1| hypothetical protein SinmeB_4262 [Sinorhizobium meliloti BL225C]
 gi|334097458|gb|AEG55468.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
Length=75

 Score = 40.0 bits (92),  Expect = 0.10, Method: Compositional matrix adjust.
 Identities = 21/53 (40%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVF  53
           MRTT++I D++L AAK  A ++ +S+G VI +  RR       GG R  +P+ 
Sbjct  1   MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSLRRPRSGGERNGIPLL  53


>gi|336038110|gb|AEH84040.1| hypothetical protein SM11_pD1208 [Sinorhizobium meliloti SM11]
Length=75

 Score = 40.0 bits (92),  Expect = 0.11, Method: Compositional matrix adjust.
 Identities = 21/53 (40%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVF  53
           MRTT++I D++L AAK  A ++ +S+G VI +  RR       GG R  +P+ 
Sbjct  1   MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSLRRPRSGGERNGIPLL  53


>gi|289573180|ref|ZP_06453407.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|289537611|gb|EFD42189.1| antitoxin [Mycobacterium tuberculosis K85]
Length=71

 Score = 39.7 bits (91),  Expect = 0.15, Method: Compositional matrix adjust.
 Identities = 23/47 (49%), Positives = 31/47 (66%), Gaps = 5/47 (10%)

Query  2   RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP  48
           +TTV + DE+ AA KR AR+RG S   VI +++R     A VGGA+P
Sbjct  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIR-----AAVGGAKP  44


>gi|206601847|gb|EDZ38330.1| Hypothetical protein CGL2_11278039 [Leptospirillum sp. Group 
II '5-way CG']
Length=152

 Score = 39.7 bits (91),  Expect = 0.16, Method: Compositional matrix adjust.
 Identities = 27/72 (38%), Positives = 42/72 (59%), Gaps = 5/72 (6%)

Query  1    MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGG---ARPTVPVFDGGT  57
            MRTT+ I +++L  A+  AR +G+S+G VI D  R+  A   + G   +  TV VF    
Sbjct  73   MRTTLDIDEDVLETARELARRQGKSIGKVISDLGRQ--ALMEMSGRDLSSETVSVFGFRP  130

Query  58   GPRRGIDLTSNR  69
             P+RG  +T++R
Sbjct  131  FPKRGGVVTNDR  142


>gi|15607721|ref|NP_215095.1| hypothetical protein Rv0581 [Mycobacterium tuberculosis H37Rv]
 gi|31791763|ref|NP_854256.1| hypothetical protein Mb0596 [Mycobacterium bovis AF2122/97]
 gi|121636499|ref|YP_976722.1| hypothetical protein BCG_0626 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 68 more sequence titles
 Length=71

 Score = 39.7 bits (91),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 23/47 (49%), Positives = 31/47 (66%), Gaps = 5/47 (10%)

Query  2   RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP  48
           +TTV + DE+ AA KR AR+RG S   VI +++R     A VGGA+P
Sbjct  3   KTTVYLPDELKAAVKRAARQRGVSEAQVIRESIR-----AAVGGAKP  44


>gi|344199816|ref|YP_004784142.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans 
SS3]
 gi|343775260|gb|AEM47816.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans 
SS3]
Length=77

 Score = 38.9 bits (89),  Expect = 0.25, Method: Compositional matrix adjust.
 Identities = 22/57 (39%), Positives = 33/57 (58%), Gaps = 5/57 (8%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGAR-----PTVPV  52
           MRTT++I D++LAAAK  A  + +S+GAV+   LR+     +  G       P +PV
Sbjct  1   MRTTLAIDDDVLAAAKGLADRQHKSVGAVVSALLRQALQPQNTSGGHSRNGIPLLPV  57


>gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Synechococcus sp. CC9311]
 gi|113881940|gb|ABI46898.1| conserved hypothetical protein [Synechococcus sp. CC9311]
Length=81

 Score = 38.9 bits (89),  Expect = 0.27, Method: Compositional matrix adjust.
 Identities = 24/65 (37%), Positives = 37/65 (57%), Gaps = 9/65 (13%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGAR---------PTVP  51
           MRTT+ + D++LAAA+  AR+R +S+G VI D  R+  +    GG++         P +P
Sbjct  1   MRTTLRLDDDVLAAARVLARQRRRSVGDVISDLARQTLSRPADGGSQNVLEQRSGLPQLP  60

Query  52  VFDGG  56
           V   G
Sbjct  61  VKASG  65


>gi|289446134|ref|ZP_06435878.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289419092|gb|EFD16293.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
Length=71

 Score = 38.9 bits (89),  Expect = 0.27, Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (66%), Gaps = 5/46 (10%)

Query  3   TTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP  48
           TTV + DE+ AA KR AR+RG S   VI +++R     A VGGA+P
Sbjct  4   TTVYLPDELKAAVKRAARQRGVSEAQVIRESIR-----AAVGGAKP  44


>gi|304413693|ref|ZP_07395137.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola 
LSR1]
 gi|304283784|gb|EFL92178.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola 
LSR1]
Length=82

 Score = 38.5 bits (88),  Expect = 0.35, Method: Compositional matrix adjust.
 Identities = 23/43 (54%), Positives = 29/43 (68%), Gaps = 3/43 (6%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHV  43
           MRTT++I D+ILAAAK  A  + +SLGAVI    R+   A HV
Sbjct  9   MRTTLAIDDDILAAAKGLAARQNKSLGAVISSLARQ---ALHV  48


>gi|167969003|ref|ZP_02551280.1| hypothetical protein MtubH3_13632 [Mycobacterium tuberculosis 
H37Ra]
Length=71

 Score = 38.5 bits (88),  Expect = 0.35, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 31/47 (66%), Gaps = 5/47 (10%)

Query  2   RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP  48
           +TTV + DE+ A+ KR AR+RG S   VI +++R     A VGGA+P
Sbjct  3   KTTVYLPDELKASVKRAARQRGVSEAQVIRESIR-----AAVGGAKP  44


>gi|254363539|ref|ZP_04979585.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134149053|gb|EBA41098.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
Length=71

 Score = 38.5 bits (88),  Expect = 0.37, Method: Compositional matrix adjust.
 Identities = 24/47 (52%), Positives = 29/47 (62%), Gaps = 5/47 (10%)

Query  2   RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP  48
           +TTV + DE+ AA KR AR+RG S   VI     RE   A VGGA+P
Sbjct  3   KTTVYLPDELKAAVKRAARQRGVSEAQVI-----RESIWAAVGGAKP  44


>gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 [Rhizobium leguminosarum bv. trifolii 
WSM1325]
 gi|240862973|gb|ACS60637.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii 
WSM1325]
Length=75

 Score = 38.1 bits (87),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 20/53 (38%), Positives = 31/53 (59%), Gaps = 0/53 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVF  53
           MRTT++I D++L AAK  A ++ +S+G VI +  RR        G R  +P+ 
Sbjct  1   MRTTLAIDDDVLTAAKAMATQQHRSVGEVISELARRSLRRPPSSGERNGIPLL  53


>gi|56478773|ref|YP_160362.1| hypothetical protein ebA5867 [Aromatoleum aromaticum EbN1]
 gi|56314816|emb|CAI09461.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length=81

 Score = 38.1 bits (87),  Expect = 0.44, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 34/58 (59%), Gaps = 4/58 (6%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF--AAAHVGGAR--PTVPVFD  54
           MRTT+ I  ++LAAAK  AR++  S+G VI   +RR    AAA     R  P VP F+
Sbjct  1   MRTTLDIESDVLAAAKEIARQQHTSVGKVISQLVRRTLIGAAAPQTVVRQTPAVPGFE  58


>gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
 gi|86168995|gb|EAQ70251.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
Length=82

 Score = 38.1 bits (87),  Expect = 0.50, Method: Compositional matrix adjust.
 Identities = 31/86 (37%), Positives = 41/86 (48%), Gaps = 9/86 (10%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHV----GGARPTVPVFDGG  56
           MRTT+ I D++L AAK  A+++  S G V+   LR+    AH       ARP    F   
Sbjct  1   MRTTLDIDDDLLQAAKDLAKQQRMSAGQVVSTLLRQALTQAHHSPSEAAARPHPCGFRPF  60

Query  57  TG-PRRGIDLTSNRALSEVLDEGLEL  81
            G P R     +N A  E L + L L
Sbjct  61  AGDPSR----ITNNADVEALRDALNL  82


>gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycobacterium tuberculosis CDC1551]
 gi|31793712|ref|NP_856205.1| hypothetical protein Mb2559Ac [Mycobacterium bovis AF2122/97]
 gi|57116999|ref|YP_177672.1| hypothetical protein Rv2530A [Mycobacterium tuberculosis H37Rv]
 68 more sequence titles
 Length=74

 Score = 37.7 bits (86),  Expect = 0.53, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 31/57 (55%), Gaps = 7/57 (12%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREF---AAAHVGGARPTVPVFD  54
           MRTT+ I D++L  A+  AR  G+S+GAVI +  RR         V G     PVFD
Sbjct  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDG----FPVFD  53


>gi|258593475|emb|CBE69814.1| conserved protein of unknown function [NC10 bacterium 'Dutch 
sediment']
Length=75

 Score = 37.7 bits (86),  Expect = 0.55, Method: Compositional matrix adjust.
 Identities = 18/56 (33%), Positives = 30/56 (54%), Gaps = 0/56 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGG  56
           M+TT++I D ++   KR A  +G+++  ++E ALR    A       P +P F  G
Sbjct  1   MKTTLNIDDSVMVLLKREAARQGRTMSELVESALRLMLRAQRRRSGLPPLPTFRSG  56


>gi|340358884|ref|ZP_08681387.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon 
448 str. F0400]
 gi|339885630|gb|EGQ75339.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon 
448 str. F0400]
Length=77

 Score = 37.7 bits (86),  Expect = 0.61, Method: Compositional matrix adjust.
 Identities = 25/54 (47%), Positives = 31/54 (58%), Gaps = 2/54 (3%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIED-ALRREFAAAHVGGARPTVPVF  53
           MRTT+ I D +LA A+ +AR  G SLG  + D ALR         G+R  VPVF
Sbjct  1   MRTTLDIDDSVLAVAREKARREGLSLGRAVSDYALRGIRGGGPDAGSR-GVPVF  53


>gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_03168 [Rhizobium etli Kim 5]
Length=63

 Score = 37.7 bits (86),  Expect = 0.61, Method: Compositional matrix adjust.
 Identities = 20/53 (38%), Positives = 31/53 (59%), Gaps = 0/53 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVF  53
           MRTT++I D++L AAK  A ++ +S+G VI +  RR        G R  +P+ 
Sbjct  7   MRTTLAIDDDVLIAAKAMATQQHRSVGEVISELARRSLRRPPSSGERNGIPLL  59


>gi|340625611|ref|YP_004744063.1| hypothetical protein MCAN_05871 [Mycobacterium canettii CIPT 
140010059]
 gi|340003801|emb|CCC42927.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=71

 Score = 37.4 bits (85),  Expect = 0.73, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 30/47 (64%), Gaps = 5/47 (10%)

Query  2   RTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP  48
           +TTV + DE+ AA K  AR+RG S   VI +++R     A VGGA+P
Sbjct  3   KTTVYLPDELKAAVKHAARQRGVSEAEVIRESIR-----AAVGGAKP  44


>gi|258593409|emb|CBE69748.1| conserved protein of unknown function [NC10 bacterium 'Dutch 
sediment']
Length=81

 Score = 37.0 bits (84),  Expect = 0.86, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 41/78 (53%), Gaps = 0/78 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPR  60
           M+TT+ ++D +L  A++ A   G +L A++E+ LRR  A    GG          G+G +
Sbjct  1   MKTTIEVTDTLLRDARQLAANEGTTLRALVEEGLRRILAEREQGGRFHLRKATFKGSGLQ  60

Query  61  RGIDLTSNRALSEVLDEG  78
            G+   S   + E++ EG
Sbjct  61  PGLTTASWDRIREMIYEG  78


>gi|116748339|ref|YP_845026.1| hypothetical protein Sfum_0895 [Syntrophobacter fumaroxidans 
MPOB]
 gi|116697403|gb|ABK16591.1| conserved hypothetical protein [Syntrophobacter fumaroxidans 
MPOB]
Length=88

 Score = 37.0 bits (84),  Expect = 1.0, Method: Compositional matrix adjust.
 Identities = 21/48 (44%), Positives = 27/48 (57%), Gaps = 0/48 (0%)

Query  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARP  48
           MRTT++I DEI  + K  A   G+S   V+ DALR+   A     ARP
Sbjct  1   MRTTLTIDDEIAVSLKDLAHRSGKSFRQVVNDALRKGAHALENPEARP  48



Lambda     K      H
   0.316    0.133    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 131466506940




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40