BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0749
Length=142
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607889|ref|NP_215263.1| hypothetical protein Rv0749 [Mycoba... 281 2e-74
gi|121636671|ref|YP_976894.1| hypothetical protein BCG_0799 [Myc... 279 9e-74
gi|340625767|ref|YP_004744219.1| hypothetical protein MCAN_07521... 272 9e-72
gi|340625313|ref|YP_004743765.1| hypothetical protein MCAN_02841... 271 2e-71
gi|253797202|ref|YP_003030203.1| toxin [Mycobacterium tuberculos... 268 3e-70
gi|306774366|ref|ZP_07412703.1| toxin [Mycobacterium tuberculosi... 267 5e-70
gi|15607418|ref|NP_214791.1| hypothetical protein Rv0277c [Mycob... 266 1e-69
gi|289744472|ref|ZP_06503850.1| conserved hypothetical protein [... 261 2e-68
gi|289756836|ref|ZP_06516214.1| conserved hypothetical protein [... 206 1e-51
gi|88811999|ref|ZP_01127252.1| hypothetical protein NB231_06401 ... 110 8e-23
gi|116748338|ref|YP_845025.1| PilT domain-containing protein [Sy... 108 3e-22
gi|340627865|ref|YP_004746317.1| hypothetical protein MCAN_28941... 102 2e-20
gi|15610009|ref|NP_217388.1| hypothetical protein Rv2872 [Mycoba... 102 2e-20
gi|121638754|ref|YP_978978.1| hypothetical protein BCG_2894 [Myc... 100 6e-20
gi|297623624|ref|YP_003705058.1| PIN domain-containing protein [... 98.2 3e-19
gi|240171734|ref|ZP_04750393.1| hypothetical protein MkanA1_2064... 95.5 3e-18
gi|297567544|ref|YP_003686516.1| PIN domain-containing protein f... 94.7 4e-18
gi|296130776|ref|YP_003638026.1| PIN domain protein family prote... 94.4 5e-18
gi|116624725|ref|YP_826881.1| PilT domain-containing protein [Ca... 94.4 6e-18
gi|297623633|ref|YP_003705067.1| PIN domain-containing protein [... 93.2 1e-17
gi|88810689|ref|ZP_01125946.1| hypothetical protein NB231_16453 ... 89.7 1e-16
gi|308270136|emb|CBX26748.1| hypothetical protein N47_A07770 [un... 89.7 1e-16
gi|300780204|ref|ZP_07090060.1| PilT domain protein [Corynebacte... 84.3 5e-15
gi|340627115|ref|YP_004745567.1| hypothetical protein MCAN_21291... 82.8 1e-14
gi|15609240|ref|NP_216619.1| hypothetical protein Rv2103c [Mycob... 80.1 1e-13
gi|15841594|ref|NP_336631.1| hypothetical protein MT2163 [Mycoba... 80.1 1e-13
gi|289758220|ref|ZP_06517598.1| conserved hypothetical protein [... 79.3 2e-13
gi|333991903|ref|YP_004524517.1| PIN domain-containing protein f... 79.3 2e-13
gi|160898241|ref|YP_001563823.1| PilT domain-containing protein ... 79.0 2e-13
gi|307084750|ref|ZP_07493863.1| toxin [Mycobacterium tuberculosi... 78.6 3e-13
gi|320105317|ref|YP_004180907.1| PIN domain-containing protein f... 77.8 5e-13
gi|145221522|ref|YP_001132200.1| PilT domain-containing protein ... 77.0 9e-13
gi|333990439|ref|YP_004523053.1| hypothetical protein JDM601_179... 74.7 4e-12
gi|229822546|ref|YP_002884072.1| PIN domain-containing protein f... 73.6 1e-11
gi|294054235|ref|YP_003547893.1| PIN domain-containing protein f... 73.2 1e-11
gi|15608382|ref|NP_215758.1| hypothetical protein Rv1242 [Mycoba... 72.4 2e-11
gi|289573902|ref|ZP_06454129.1| toxin [Mycobacterium tuberculosi... 69.7 2e-10
gi|289750699|ref|ZP_06510077.1| conserved hypothetical protein [... 69.3 2e-10
gi|240168912|ref|ZP_04747571.1| hypothetical protein MkanA1_0634... 68.9 2e-10
gi|240170675|ref|ZP_04749334.1| PIN domain protein family protei... 68.6 3e-10
gi|302542963|ref|ZP_07295305.1| putative toxin-antitoxin system,... 62.0 3e-08
gi|284122509|ref|ZP_06386855.1| PIN domain family protein [Candi... 61.6 4e-08
gi|322435687|ref|YP_004217899.1| PIN domain protein family prote... 61.6 4e-08
gi|167967876|ref|ZP_02550153.1| hypothetical protein MtubH3_0751... 56.6 1e-06
gi|258593476|emb|CBE69815.1| conserved protein of unknown functi... 55.8 2e-06
gi|258593480|emb|CBE69819.1| Conserved membrane protein [NC10 ba... 49.7 1e-04
gi|340628670|ref|YP_004747122.1| hypothetical protein MCAN_37181... 48.9 2e-04
gi|15610833|ref|NP_218214.1| hypothetical protein Rv3697c [Mycob... 48.9 2e-04
gi|31794868|ref|NP_857361.1| hypothetical protein Mb3723c [Mycob... 48.1 4e-04
gi|312622997|ref|YP_004024610.1| PilT protein domain-containing ... 47.0 0.001
>gi|15607889|ref|NP_215263.1| hypothetical protein Rv0749 [Mycobacterium tuberculosis H37Rv]
gi|15840162|ref|NP_335199.1| hypothetical protein MT0773 [Mycobacterium tuberculosis CDC1551]
gi|31791935|ref|NP_854428.1| hypothetical protein Mb0770 [Mycobacterium bovis AF2122/97]
64 more sequence titles
Length=142
Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/142 (100%), Positives = 142/142 (100%), Gaps = 0/142 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP
Sbjct 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC
Sbjct 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
Query 121 AVVSLDRDFARFASVRHIRPPL 142
AVVSLDRDFARFASVRHIRPPL
Sbjct 121 AVVSLDRDFARFASVRHIRPPL 142
>gi|121636671|ref|YP_976894.1| hypothetical protein BCG_0799 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989143|ref|YP_002643830.1| hypothetical protein JTY_0769 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289442150|ref|ZP_06431894.1| toxin [Mycobacterium tuberculosis T46]
10 more sequence titles
Length=142
Score = 279 bits (714), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 141/142 (99%), Positives = 142/142 (100%), Gaps = 0/142 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP
Sbjct 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
SPRAEAFAFVEAVTAQPHHLPTNPGPRHL+LLRKLCDEADASGDLIPDAVLAAIAVGHHC
Sbjct 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLVLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
Query 121 AVVSLDRDFARFASVRHIRPPL 142
AVVSLDRDFARFASVRHIRPPL
Sbjct 121 AVVSLDRDFARFASVRHIRPPL 142
>gi|340625767|ref|YP_004744219.1| hypothetical protein MCAN_07521 [Mycobacterium canettii CIPT
140010059]
gi|340003957|emb|CCC43092.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142
Score = 272 bits (696), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 137/142 (97%), Positives = 139/142 (98%), Gaps = 0/142 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP
Sbjct 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
SPRA AFAF++AVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAV HHC
Sbjct 61 SPRAAAFAFIDAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVEHHC 120
Query 121 AVVSLDRDFARFASVRHIRPPL 142
AVVSLDRDFARF SVRHIRPPL
Sbjct 121 AVVSLDRDFARFTSVRHIRPPL 142
>gi|340625313|ref|YP_004743765.1| hypothetical protein MCAN_02841 [Mycobacterium canettii CIPT
140010059]
gi|340003503|emb|CCC42624.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/142 (96%), Positives = 140/142 (99%), Gaps = 0/142 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRL TNRRIFEIP
Sbjct 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
SPRA+AFAFV+AVTAQPHHLPT+PGPRHLMLLRKLCDEADASGDLIPDAVLAAIAV HHC
Sbjct 61 SPRADAFAFVDAVTAQPHHLPTSPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVEHHC 120
Query 121 AVVSLDRDFARFASVRHIRPPL 142
AVVSLDRDFARFASVRHIRPP+
Sbjct 121 AVVSLDRDFARFASVRHIRPPI 142
>gi|253797202|ref|YP_003030203.1| toxin [Mycobacterium tuberculosis KZN 1435]
gi|289552530|ref|ZP_06441740.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|297632757|ref|ZP_06950537.1| toxin [Mycobacterium tuberculosis KZN 4207]
gi|297729731|ref|ZP_06958849.1| toxin [Mycobacterium tuberculosis KZN R506]
gi|313657057|ref|ZP_07813937.1| toxin [Mycobacterium tuberculosis KZN V2475]
gi|253318705|gb|ACT23308.1| toxin [Mycobacterium tuberculosis KZN 1435]
gi|289437162|gb|EFD19655.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|328456989|gb|AEB02412.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length=142
Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/142 (94%), Positives = 138/142 (98%), Gaps = 0/142 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
MFL+D NVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRL TNRRIFEIP
Sbjct 1 MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
SPRA+AFAFVEAVTAQPHHLPT+PGPRHL+LLRKLCDEADASGDLIPDAVL AIAV HHC
Sbjct 61 SPRADAFAFVEAVTAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHC 120
Query 121 AVVSLDRDFARFASVRHIRPPL 142
AVVSLDRDFARFASVRHIRPP+
Sbjct 121 AVVSLDRDFARFASVRHIRPPI 142
>gi|306774366|ref|ZP_07412703.1| toxin [Mycobacterium tuberculosis SUMu001]
gi|306974699|ref|ZP_07487360.1| toxin [Mycobacterium tuberculosis SUMu010]
gi|307082408|ref|ZP_07491578.1| toxin [Mycobacterium tuberculosis SUMu011]
gi|308217200|gb|EFO76599.1| toxin [Mycobacterium tuberculosis SUMu001]
gi|308356102|gb|EFP44953.1| toxin [Mycobacterium tuberculosis SUMu010]
gi|308360056|gb|EFP48907.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=142
Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/142 (94%), Positives = 138/142 (98%), Gaps = 0/142 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
MFL+D NVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRL TNRRIFEIP
Sbjct 1 MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
SPRA+AFAFVEAV AQPHHLPT+PGPRHL+LLRKLCDEADASGDLIPDAVLAAIAV HHC
Sbjct 61 SPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLAAIAVEHHC 120
Query 121 AVVSLDRDFARFASVRHIRPPL 142
AVVSLDRDFARFASVRHIRPP+
Sbjct 121 AVVSLDRDFARFASVRHIRPPI 142
>gi|15607418|ref|NP_214791.1| hypothetical protein Rv0277c [Mycobacterium tuberculosis H37Rv]
gi|15839658|ref|NP_334695.1| hypothetical protein MT0289 [Mycobacterium tuberculosis CDC1551]
gi|31791455|ref|NP_853948.1| hypothetical protein Mb0283c [Mycobacterium bovis AF2122/97]
64 more sequence titles
Length=142
Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/142 (93%), Positives = 137/142 (97%), Gaps = 0/142 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
MFL+D NVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRL TNRRIFEIP
Sbjct 1 MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
SPRA+AFAFVEAV AQPHHLPT+PGPRHL+LLRKLCDEADASGDLIPDAVL AIAV HHC
Sbjct 61 SPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHC 120
Query 121 AVVSLDRDFARFASVRHIRPPL 142
AVVSLDRDFARFASVRHIRPP+
Sbjct 121 AVVSLDRDFARFASVRHIRPPI 142
>gi|289744472|ref|ZP_06503850.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289685000|gb|EFD52488.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=131
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/131 (100%), Positives = 131/131 (100%), Gaps = 0/131 (0%)
Query 12 AHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPRAEAFAFVE 71
AHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPRAEAFAFVE
Sbjct 1 AHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPRAEAFAFVE 60
Query 72 AVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVVSLDRDFAR 131
AVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVVSLDRDFAR
Sbjct 61 AVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVVSLDRDFAR 120
Query 132 FASVRHIRPPL 142
FASVRHIRPPL
Sbjct 121 FASVRHIRPPL 131
>gi|289756836|ref|ZP_06516214.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289712400|gb|EFD76412.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=104
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/104 (99%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 39 VPNLVWASFLRLATNRRIFEIPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDE 98
+PNLVWASFLRLATNRRIFEIPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDE
Sbjct 1 MPNLVWASFLRLATNRRIFEIPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDE 60
Query 99 ADASGDLIPDAVLAAIAVGHHCAVVSLDRDFARFASVRHIRPPL 142
ADASGDLIPDAVLAAIAVGHHCAVVSLDRDFARFASVRHIRPPL
Sbjct 61 ADASGDLIPDAVLAAIAVGHHCAVVSLDRDFARFASVRHIRPPL 104
>gi|88811999|ref|ZP_01127252.1| hypothetical protein NB231_06401 [Nitrococcus mobilis Nb-231]
gi|88790883|gb|EAR21997.1| hypothetical protein NB231_06401 [Nitrococcus mobilis Nb-231]
Length=145
Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/136 (40%), Positives = 79/136 (59%), Gaps = 0/136 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M L+D NVL+ AHR D +H R W + + + V +LV + F+R+ T+ R+FE P
Sbjct 1 MILMDVNVLVYAHREDTADHLAYRDWLEEQINGLGAYGVSDLVLSGFIRVVTHPRVFERP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+P A AFV V +QP +P PGPRH + KL + A G+L+PDA AA+A+ C
Sbjct 61 TPLDRALAFVHQVRSQPQAVPIRPGPRHWAIFEKLVRLSKAEGNLVPDAYHAALAIEAGC 120
Query 121 AVVSLDRDFARFASVR 136
++ D+ F RF +R
Sbjct 121 DWITTDKGFLRFPGLR 136
>gi|116748338|ref|YP_845025.1| PilT domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697402|gb|ABK16590.1| PIN domain family protein [Syntrophobacter fumaroxidans MPOB]
Length=144
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/140 (41%), Positives = 77/140 (55%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M L+D N+LL A D P H R W + +L+ + +P +V +FLR+ TN RIFE P
Sbjct 1 MILVDVNLLLYAVNQDLPQHARSRTWLETVLSGSESVGLPWVVIRAFLRITTNARIFERP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
A A+VE AQP PG H M+LR L ++ G+L DA +AA+A+ +
Sbjct 61 LSVERAVAYVEEWLAQPVATTVTPGKSHWMILRNLLLDSGTGGNLTTDAHIAALAIEYGH 120
Query 121 AVVSLDRDFARFASVRHIRP 140
V S D DF RF +RHI P
Sbjct 121 TVYSTDNDFKRFQGLRHINP 140
>gi|340627865|ref|YP_004746317.1| hypothetical protein MCAN_28941 [Mycobacterium canettii CIPT
140010059]
gi|157382523|gb|ABV48756.1| Rv2872 [Mycobacterium canettii]
gi|340006055|emb|CCC45225.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=147
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/140 (41%), Positives = 81/140 (58%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M +D NVL+ AHR D H R +RL D+P +P+ V A F+R+ TNRR+F P
Sbjct 1 MLCVDVNVLVYAHRADLREHTDYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+ +A+ V+A+ A P + PG RH M R+L + DA+G+ I DA LAA A+ ++
Sbjct 61 TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+S DR FARF +R P
Sbjct 121 TWLSADRGFARFRRLRWRHP 140
>gi|15610009|ref|NP_217388.1| hypothetical protein Rv2872 [Mycobacterium tuberculosis H37Rv]
gi|15842413|ref|NP_337450.1| hypothetical protein MT2939 [Mycobacterium tuberculosis CDC1551]
gi|31794049|ref|NP_856542.1| hypothetical protein Mb2897 [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=147
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/140 (41%), Positives = 81/140 (58%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M +D NVL+ AHR D H R +RL D+P +P+ V A F+R+ TNRR+F P
Sbjct 1 MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+ +A+ V+A+ A P + PG RH M R+L + DA+G+ I DA LAA A+ ++
Sbjct 61 TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+S DR FARF +R P
Sbjct 121 TWLSADRGFARFRRLRWRHP 140
>gi|121638754|ref|YP_978978.1| hypothetical protein BCG_2894 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991246|ref|YP_002645935.1| hypothetical protein JTY_2889 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121494402|emb|CAL72883.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774361|dbj|BAH27167.1| hypothetical protein JTY_2889 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341602792|emb|CCC65470.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=147
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 80/140 (58%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M +D NVL+ AHR D H R +RL D+P +P+ V A F+R+ TNRR+F P
Sbjct 1 MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+ +A+ V+ + A P + PG RH M R+L + DA+G+ I DA LAA A+ ++
Sbjct 61 TSPQDAWQAVDTLLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+S DR FARF +R P
Sbjct 121 TWLSADRGFARFRRLRWRHP 140
>gi|297623624|ref|YP_003705058.1| PIN domain-containing protein [Truepera radiovictrix DSM 17093]
gi|297164804|gb|ADI14515.1| PIN domain protein family protein [Truepera radiovictrix DSM
17093]
Length=144
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/140 (37%), Positives = 79/140 (57%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M LLD N L+ A R D P H W ++L+ D F + ++V + F+R+ T+ R+F P
Sbjct 1 MILLDINPLVYAFRPDAPQHPAYVGWLEKLVNQDAAFGLADIVCSGFIRVVTHPRVFSPP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
SP +A ++E + AQP+ + PG RH + +LC A G+++PDA LAA+A+
Sbjct 61 SPLDDALEYLEDIRAQPNCVILAPGERHWRIFLQLCHAVGAKGNVVPDAYLAALAIESGS 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+ + DR ARF +R P
Sbjct 121 ELATADRGVARFPGLRWRHP 140
>gi|240171734|ref|ZP_04750393.1| hypothetical protein MkanA1_20640 [Mycobacterium kansasii ATCC
12478]
gi|157382510|gb|ABV48746.1| Rv2872 [Mycobacterium kansasii ATCC 12478]
Length=143
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/143 (45%), Positives = 86/143 (61%), Gaps = 6/143 (4%)
Query 1 MFLLDANVLLAAHRGD---HPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIF 57
M +D NVL+ AHR D HPN+R V +RL D+P +P+ V A F+R+ TNRRIF
Sbjct 1 MHCVDVNVLVNAHRADLREHPNYRDV---LERLANGDEPLGLPDSVLAGFVRVVTNRRIF 57
Query 58 EIPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVG 117
P+ + +A+ V+A+ A P + PG RH L R+L + DASG+ I DA LAA A+
Sbjct 58 VEPTSQPDAWQAVDALLAAPAAIRLKPGERHWTLFRQLAADIDASGNDIADAYLAAYALE 117
Query 118 HHCAVVSLDRDFARFASVRHIRP 140
++ VS DR FARF +R P
Sbjct 118 NNATWVSADRGFARFGRLRWRHP 140
>gi|297567544|ref|YP_003686516.1| PIN domain-containing protein family protein [Meiothermus silvanus
DSM 9946]
gi|296851993|gb|ADH65008.1| PIN domain protein family protein [Meiothermus silvanus DSM 9946]
Length=143
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/140 (36%), Positives = 74/140 (53%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M++LD NVL+ A R D P H W LA + VP+ V + LR+ T + ++
Sbjct 1 MYVLDVNVLIYAFRRDSPQHPACYAWLSGSLATGESVGVPSWVELAVLRINTLPSLGDLA 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+P + AF+ + + P + PGP+HL + LC G+ + DA +AA+A+ H
Sbjct 61 APLKDVLAFLYELRSHPSYQLVEPGPKHLPIFEDLCQRLGLRGNDLNDAFIAALAIEHGA 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+VS DR FARF VR I P
Sbjct 121 TLVSTDRGFARFPGVRRIDP 140
>gi|296130776|ref|YP_003638026.1| PIN domain protein family protein [Cellulomonas flavigena DSM
20109]
gi|296022591|gb|ADG75827.1| PIN domain protein family protein [Cellulomonas flavigena DSM
20109]
Length=143
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/136 (40%), Positives = 74/136 (55%), Gaps = 0/136 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M L D NVL+ A R D P H +R W + + A +P + + V +R+ T+ R+F P
Sbjct 1 MILPDVNVLVGALRADSPRHDALRRWLEAAVDAPEPLGLTDAVLGGTVRVLTHPRVFARP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+P A V + A P + PG RH ++ LC ADA G+L+ DA AA+AV H
Sbjct 61 TPLRTALDLVGDLRAHPGTVRVAPGDRHWEIVADLCRAADARGNLVADAQHAAVAVEHGA 120
Query 121 AVVSLDRDFARFASVR 136
VS DRDFARF +R
Sbjct 121 TWVSQDRDFARFPGLR 136
>gi|116624725|ref|YP_826881.1| PilT domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227887|gb|ABJ86596.1| PIN domain family protein [Candidatus Solibacter usitatus Ellin6076]
Length=142
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/140 (38%), Positives = 77/140 (55%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M LLDAN+LL A D P H++ R W ++ L+ D+P V +FLRL T +F P
Sbjct 1 MKLLDANILLYAVNKDAPLHQSARQWLEKTLSGDEPLGFSWNVILAFLRLTTRPGLFRKP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+AF V + A+P + + GPRHL ++ +L +G+L DA L A+A+ +
Sbjct 61 LSPDQAFDLVASWLAEPAAIIVHAGPRHLEIVHRLIKPLGTAGNLTSDAHLGALAIEQNA 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+ S D DFARF+ V + P
Sbjct 121 QLCSCDSDFARFSGVDWLNP 140
>gi|297623633|ref|YP_003705067.1| PIN domain-containing protein [Truepera radiovictrix DSM 17093]
gi|297164813|gb|ADI14524.1| PIN domain protein family protein [Truepera radiovictrix DSM
17093]
Length=145
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/140 (41%), Positives = 74/140 (53%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M L+DAN+L+ AH P H W D L+A +P +FLRL TN R+FE P
Sbjct 1 MILIDANLLIYAHVMGSPQHHAAHAWLDAQLSAGYRVGLPWPSLLAFLRLTTNPRVFERP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
AEA+A VEA + P P H LLR L + A+ +LIPDA LAA+A+ H
Sbjct 61 LTAAEAWAQVEAWLSVPSVWLPTPTAEHPKLLRDLVTQTGATANLIPDAHLAALALEHGL 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+ S D DF RF ++ P
Sbjct 121 TLCSTDGDFGRFPRLKWRNP 140
>gi|88810689|ref|ZP_01125946.1| hypothetical protein NB231_16453 [Nitrococcus mobilis Nb-231]
gi|88792319|gb|EAR23429.1| hypothetical protein NB231_16453 [Nitrococcus mobilis Nb-231]
Length=144
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/143 (36%), Positives = 79/143 (56%), Gaps = 6/143 (4%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWAS---FLRLATNRRIF 57
M + D N+L+ A+ D P+H + W++ LL++++P +P WAS F+RL T+R +
Sbjct 1 MIVPDVNLLIYAYNTDAPHHSDAKAWWEGLLSSEEPVGLP---WASALGFIRLMTHRAVL 57
Query 58 EIPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVG 117
+P + A +V + ++ + PGPRHL LL L +G L D LAA+A+
Sbjct 58 VMPVEPSRAVEYVRSWHSRSNVSALEPGPRHLELLDGLFAALGTAGKLTTDTHLAALAIE 117
Query 118 HHCAVVSLDRDFARFASVRHIRP 140
H C + S D DFARF +R P
Sbjct 118 HQCVLCSNDGDFARFPGLRWRNP 140
>gi|308270136|emb|CBX26748.1| hypothetical protein N47_A07770 [uncultured Desulfobacterium
sp.]
Length=143
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/140 (35%), Positives = 75/140 (54%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M L+DAN+LL A P H+ R W+D L+ +P + V ++F+R+ TN R+FE P
Sbjct 1 MILVDANILLYAEDSLSPLHQQARLWWDDQLSKSEPVCLCWPVLSAFIRIGTNPRVFEHP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
P +A V++ QP P +H + + A +L+ DA LAA+A+ + C
Sbjct 61 LPLEQALTRVQSWLDQPCTRVIQPTEQHWAVFMMMLKGGQAVANLVTDAHLAALAIENGC 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+ S D DF+RF ++ I P
Sbjct 121 DLASTDSDFSRFPKLKWINP 140
>gi|300780204|ref|ZP_07090060.1| PilT domain protein [Corynebacterium genitalium ATCC 33030]
gi|300534314|gb|EFK55373.1| PilT domain protein [Corynebacterium genitalium ATCC 33030]
Length=145
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/139 (34%), Positives = 71/139 (52%), Gaps = 0/139 (0%)
Query 2 FLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPS 61
++DANVL+ A + + W D L + P + +F R+ TN +F +P
Sbjct 1 MIIDANVLIYASDENATHFAEASSWLDGALRGTERVGFPWICLLAFQRITTNPALFAMPL 60
Query 62 PRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCA 121
+ A ++E P+ PGP+H +LR L ++DA G L+ DA LAA+A+ H +
Sbjct 61 TPSRASDYIENWLKHPNSWVPQPGPQHASILRTLTVDSDARGTLVTDAHLAALAIEHGTS 120
Query 122 VVSLDRDFARFASVRHIRP 140
+ S D DFARF +R P
Sbjct 121 ICSFDSDFARFQGLRWFSP 139
>gi|340627115|ref|YP_004745567.1| hypothetical protein MCAN_21291 [Mycobacterium canettii CIPT
140010059]
gi|340005305|emb|CCC44461.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=144
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/141 (38%), Positives = 71/141 (51%), Gaps = 0/141 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M ++DANVLL A +H+ W D L+ D + SF+RLAT +F P
Sbjct 1 MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLSFVRLATKVGLFPRP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
PR A V A P + NP RH +L ++ +L+ DA LAA+AV H
Sbjct 61 LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA 120
Query 121 AVVSLDRDFARFASVRHIRPP 141
++VS D DF RFA VR +PP
Sbjct 121 SIVSYDSDFGRFAGVRWDQPP 141
>gi|15609240|ref|NP_216619.1| hypothetical protein Rv2103c [Mycobacterium tuberculosis H37Rv]
gi|31793285|ref|NP_855778.1| hypothetical protein Mb2129c [Mycobacterium bovis AF2122/97]
gi|121637987|ref|YP_978211.1| hypothetical protein BCG_2122c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
67 more sequence titles
Length=144
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/141 (37%), Positives = 70/141 (50%), Gaps = 0/141 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M ++DANVLL A +H+ W D L+ D + +F+RLAT +F P
Sbjct 1 MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
PR A V A P + NP RH +L ++ +L+ DA LAA+AV H
Sbjct 61 LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA 120
Query 121 AVVSLDRDFARFASVRHIRPP 141
++VS D DF RF VR +PP
Sbjct 121 SIVSYDSDFGRFEGVRWDQPP 141
>gi|15841594|ref|NP_336631.1| hypothetical protein MT2163 [Mycobacterium tuberculosis CDC1551]
gi|13881843|gb|AAK46445.1| hypothetical protein MT2163 [Mycobacterium tuberculosis CDC1551]
Length=145
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/141 (37%), Positives = 70/141 (50%), Gaps = 0/141 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M ++DANVLL A +H+ W D L+ D + +F+RLAT +F P
Sbjct 2 MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP 61
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
PR A V A P + NP RH +L ++ +L+ DA LAA+AV H
Sbjct 62 LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA 121
Query 121 AVVSLDRDFARFASVRHIRPP 141
++VS D DF RF VR +PP
Sbjct 122 SIVSYDSDFGRFEGVRWDQPP 142
>gi|289758220|ref|ZP_06517598.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294997046|ref|ZP_06802737.1| hypothetical protein Mtub2_21708 [Mycobacterium tuberculosis
210]
gi|289713784|gb|EFD77796.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|326903715|gb|EGE50648.1| toxin [Mycobacterium tuberculosis W-148]
gi|339295024|gb|AEJ47135.1| hypothetical protein CCDC5079_1945 [Mycobacterium tuberculosis
CCDC5079]
gi|339298648|gb|AEJ50758.1| hypothetical protein CCDC5180_1921 [Mycobacterium tuberculosis
CCDC5180]
Length=144
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (37%), Positives = 70/141 (50%), Gaps = 0/141 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M ++DANVLL A +H+ W D L+ D + +F+RLAT +F P
Sbjct 1 MKIVDANVLLYAVNTASEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
PR A V A P + NP RH +L ++ +L+ DA LAA+AV H
Sbjct 61 LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA 120
Query 121 AVVSLDRDFARFASVRHIRPP 141
++VS D DF RF VR +PP
Sbjct 121 SIVSYDSDFGRFEGVRWDQPP 141
>gi|333991903|ref|YP_004524517.1| PIN domain-containing protein family protein [Mycobacterium sp.
JDM601]
gi|333487871|gb|AEF37263.1| PIN domain protein family protein [Mycobacterium sp. JDM601]
Length=143
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/139 (34%), Positives = 71/139 (52%), Gaps = 0/139 (0%)
Query 2 FLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPS 61
LLDAN+LL A D ++ W + L D+ +P +FLR+ T+ R+ E P
Sbjct 1 MLLDANLLLYAVDADSKHNPVAAAWLEETLNGDNRIGLPWQTIGAFLRIITHPRVTENPL 60
Query 62 PRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCA 121
P +EA+++V A P + +C +AD +G+L+PDA LAA+A+ H
Sbjct 61 PPSEAWSYVADWLAVPVVWIPPATEATARVYAGICAQADVAGNLVPDAQLAALAIEHGVE 120
Query 122 VVSLDRDFARFASVRHIRP 140
+ S D DF RF +R P
Sbjct 121 LASADSDFQRFPGLRWFNP 139
>gi|160898241|ref|YP_001563823.1| PilT domain-containing protein [Delftia acidovorans SPH-1]
gi|160363825|gb|ABX35438.1| PIN domain protein family protein [Delftia acidovorans SPH-1]
Length=145
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/137 (39%), Positives = 74/137 (55%), Gaps = 16/137 (11%)
Query 5 DANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNL---VWASFLRLATNRRIFEIPS 61
D N+L+AA R DHP+H R W ++ +A + L V ASFLRL T+ +IF P+
Sbjct 4 DVNLLVAASRSDHPHHSVARDWLEQAMADASQGVLLKLQPMVVASFLRLVTHPKIFVNPT 63
Query 62 PRAEAFAFVEAVTAQPHHLPTNPGPRHLML------LRKLCDEADASGDLIPDAVLAAIA 115
P AEA F++A+ A +PG +L LR+LC + + + +PDA LAA A
Sbjct 64 PMAEALRFIDALLA-------SPGVEQAVLGAEWPALRQLCADKALAANDVPDAWLAAAA 116
Query 116 VGHHCAVVSLDRDFARF 132
+ VVS D DF R
Sbjct 117 IHQGEHVVSFDADFKRL 133
>gi|307084750|ref|ZP_07493863.1| toxin [Mycobacterium tuberculosis SUMu012]
gi|308365680|gb|EFP54531.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=143
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/142 (36%), Positives = 70/142 (50%), Gaps = 0/142 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M ++DANVLL A +H+ W D L+ D + +F+RLAT +F P
Sbjct 1 MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
PR A V A P + NP RH +L ++ +L+ DA LAA+AV H
Sbjct 61 LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA 120
Query 121 AVVSLDRDFARFASVRHIRPPL 142
++VS D DF RF VR +P L
Sbjct 121 SIVSYDSDFGRFEGVRWDQPAL 142
>gi|320105317|ref|YP_004180907.1| PIN domain-containing protein family protein [Terriglobus saanensis
SP1PR4]
gi|319923838|gb|ADV80913.1| PIN domain protein family protein [Terriglobus saanensis SP1PR4]
Length=145
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/143 (32%), Positives = 74/143 (52%), Gaps = 6/143 (4%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M LLDAN+L+ A+ P+H+ W +R+ ++ +P +P +FLR+ T++ +P
Sbjct 1 MILLDANLLIYAYDEAAPHHKRSSKWIERIFSSREPVLIPVAAIMAFLRIMTHQ---ALP 57
Query 61 SPR---AEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVG 117
PR E V+ + H G H LR+ + A L+ D+ LAA+A+
Sbjct 58 GPRFSMEEGIGIVDEWFSLSHVSIAITGNEHWNYLRQTLTDGQARSSLVTDSHLAALAIE 117
Query 118 HHCAVVSLDRDFARFASVRHIRP 140
+ + S+DRDFARF +R + P
Sbjct 118 NGATLCSVDRDFARFPGLRWVDP 140
>gi|145221522|ref|YP_001132200.1| PilT domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|145214008|gb|ABP43412.1| PIN domain family protein [Mycobacterium gilvum PYR-GCK]
Length=145
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/139 (36%), Positives = 70/139 (51%), Gaps = 6/139 (4%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWA---SFLRLATNRRIF 57
M ++DANVLL A +H R W D L+ +D V L W +F+RL T +F
Sbjct 1 MRIVDANVLLYAVNSSSEHHDASRRWLDGALSGND---VVGLAWVPMLAFVRLTTKHGLF 57
Query 58 EIPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVG 117
P +A A + + P + NP RH +L L + G+L+ DA LAA+A+
Sbjct 58 PSPLTPDDAMARITDWCSAPGAVIVNPTARHADVLATLLSDVGTGGNLVNDAHLAALALE 117
Query 118 HHCAVVSLDRDFARFASVR 136
H +VS D DF RF+ V+
Sbjct 118 HRARIVSYDNDFGRFSGVQ 136
>gi|333990439|ref|YP_004523053.1| hypothetical protein JDM601_1799 [Mycobacterium sp. JDM601]
gi|333486407|gb|AEF35799.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=143
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/140 (37%), Positives = 69/140 (50%), Gaps = 1/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M ++DANVLL A +H W DR L+ D + +F+RL+T +F P
Sbjct 1 MKIVDANVLLYAVNTAAEHHDASLRWLDRALSGADTVGFAWVPLLAFVRLSTKEGLFPHP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+A V TA + NP PRH +L L A G+L+ DA LAA+A+ H
Sbjct 61 LRPEDAVDRVAEWTAASSAVVVNPTPRHADILTGLLARVGAGGNLVNDAHLAALAIEHRG 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+VS D DF RF +R RP
Sbjct 121 GIVSYDADFGRF-GIRWDRP 139
>gi|229822546|ref|YP_002884072.1| PIN domain-containing protein family protein [Beutenbergia cavernae
DSM 12333]
gi|229568459|gb|ACQ82310.1| PIN domain protein family protein [Beutenbergia cavernae DSM
12333]
Length=143
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/132 (37%), Positives = 69/132 (53%), Gaps = 2/132 (1%)
Query 2 FLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPS 61
++DANVLL A P HR + W + L+ +P +F R+A++ R P
Sbjct 1 MIVDANVLLYAVDTGSPFHRAAKEWLEEALSGPARVGLPWPSLLAFQRIASHPRAAAQPL 60
Query 62 PRAEAFAFV-EAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
A+AF+ E + A P +PT PG H +L +L D G+L+ DA LAA+A+ H
Sbjct 61 TPGAAWAFITEWLRADPAWIPT-PGDGHAAILGRLLTAGDLRGNLVTDAHLAALALEHGV 119
Query 121 AVVSLDRDFARF 132
+ S D DFARF
Sbjct 120 GICSFDSDFARF 131
>gi|294054235|ref|YP_003547893.1| PIN domain-containing protein family protein [Coraliomargarita
akajimensis DSM 45221]
gi|293613568|gb|ADE53723.1| PIN domain protein family protein [Coraliomargarita akajimensis
DSM 45221]
Length=142
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/140 (32%), Positives = 68/140 (49%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M L DAN+L+ AH +H T + W++ L+ + +P +V +F R+ T+ +I E P
Sbjct 1 MILPDANLLIYAHDHSSRDHATAKDWWETALSGSESIGIPWIVVLAFTRILTHPQICEAP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+ VE P R L + L ++A G+L DA++AA A H
Sbjct 61 LGVTQVRELVEQWFDSPQVRLIQTSNRALPVFFDLLEDAGMGGNLSTDALIAAHAREHSA 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+ S DRDF RF +R + P
Sbjct 121 VIYSCDRDFDRFMGIRWVNP 140
>gi|15608382|ref|NP_215758.1| hypothetical protein Rv1242 [Mycobacterium tuberculosis H37Rv]
gi|15840687|ref|NP_335724.1| hypothetical protein MT1280 [Mycobacterium tuberculosis CDC1551]
gi|31792435|ref|NP_854928.1| hypothetical protein Mb1274 [Mycobacterium bovis AF2122/97]
79 more sequence titles
Length=143
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (34%), Positives = 67/142 (48%), Gaps = 4/142 (2%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADD--PFTVPNLVWASFLRLATNRRIFE 58
M + D N+LL A P HR W+ + T P L FLR+AT+ R+
Sbjct 1 MIIPDINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALF--GFLRIATSARVLA 58
Query 59 IPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGH 118
P P A+A A+V +QP+ GPRHL + L D+ + L D LAA + +
Sbjct 59 APLPTADAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHLTTDVQLAAYGIEY 118
Query 119 HCAVVSLDRDFARFASVRHIRP 140
+ S D DFARFA ++ P
Sbjct 119 DAEIHSSDTDFARFADLKWTDP 140
>gi|289573902|ref|ZP_06454129.1| toxin [Mycobacterium tuberculosis K85]
gi|289538333|gb|EFD42911.1| toxin [Mycobacterium tuberculosis K85]
Length=143
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/142 (34%), Positives = 66/142 (47%), Gaps = 4/142 (2%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADD--PFTVPNLVWASFLRLATNRRIFE 58
M + D N+LL A P HR W+ + T P L FLR+AT+ R+
Sbjct 1 MIIPDINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALF--GFLRIATSARVLA 58
Query 59 IPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGH 118
P P A+A A+V +QP+ GPRHL + L D+ + D LAA + +
Sbjct 59 APLPTADAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHRTTDVQLAAYGIEY 118
Query 119 HCAVVSLDRDFARFASVRHIRP 140
+ S D DFARFA ++ P
Sbjct 119 DAEIHSSDTDFARFADLKWTDP 140
>gi|289750699|ref|ZP_06510077.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289691286|gb|EFD58715.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=136
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (34%), Positives = 63/133 (48%), Gaps = 0/133 (0%)
Query 9 LLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPRAEAFA 68
+L A +H+ W D L+ D + +F+RLAT +F P PR A
Sbjct 1 MLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLPREAAIT 60
Query 69 FVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVVSLDRD 128
V A P + NP RH +L ++ +L+ DA LAA+AV H ++VS D D
Sbjct 61 QVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRASIVSYDSD 120
Query 129 FARFASVRHIRPP 141
F RF VR +PP
Sbjct 121 FGRFEGVRWDQPP 133
>gi|240168912|ref|ZP_04747571.1| hypothetical protein MkanA1_06345 [Mycobacterium kansasii ATCC
12478]
Length=143
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/140 (33%), Positives = 64/140 (46%), Gaps = 0/140 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M + D N+LL A P HR W+ + + + + FLR+ TN RI P
Sbjct 1 MIIPDVNLLLYAVITGFPQHRRAYAWWHDTVNSQERIGLTYPAVFGFLRIVTNARILTEP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
EA A+V QP+ P RHL L L ++ + +L D LAA A+ H+
Sbjct 61 LSATEAVAYVRDWLTQPNVDLLIPSARHLDLALGLLEQLGTASNLTTDVQLAAYAIEHNA 120
Query 121 AVVSLDRDFARFASVRHIRP 140
+ S D DFARFA + P
Sbjct 121 EMHSSDADFARFAGLAWTNP 140
>gi|240170675|ref|ZP_04749334.1| PIN domain protein family protein [Mycobacterium kansasii ATCC
12478]
Length=142
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/139 (31%), Positives = 69/139 (50%), Gaps = 0/139 (0%)
Query 2 FLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPS 61
++DAN+LL A ++ W + +LA D +P +FLR+AT+ R+ E P
Sbjct 1 MIVDANLLLYAVDESSAHNVAAASWLEEVLAGDSRVGLPWQTIGAFLRIATHPRVAENPL 60
Query 62 PRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCA 121
A+ +V A P + +L ++ + +G+L+PDA LAA+AV H
Sbjct 61 SGPAAWRYVAEWLAVPVVWIPPATETTARVYARLSEQVEITGNLVPDAQLAALAVEHGVE 120
Query 122 VVSLDRDFARFASVRHIRP 140
+ S D DF RF +R + P
Sbjct 121 LASADTDFMRFPGLRWMNP 139
>gi|302542963|ref|ZP_07295305.1| putative toxin-antitoxin system, toxin component, PIN family
[Streptomyces hygroscopicus ATCC 53653]
gi|302460581|gb|EFL23674.1| putative toxin-antitoxin system, toxin component, PIN family
[Streptomyces himastatinicus ATCC 53653]
Length=144
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/133 (29%), Positives = 65/133 (49%), Gaps = 1/133 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M +D N+L+ AHR D P H L A P+ +P F +AT+ RI++ P
Sbjct 1 MIAVDTNILVYAHRSDSPFHSAAAAQIKGLAEARAPWALPWPCLHEFFSIATHPRIYQPP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
S +A A ++A + P + + + LR++ ++ +G ++ D +AA+
Sbjct 61 STAEQAIAQIDAWLSSPSVVLLSEADTYWPTLRQMLEDGKVAGPMVHDGRIAALCANSGV 120
Query 121 -AVVSLDRDFARF 132
+ S DRDF+RF
Sbjct 121 RELWSADRDFSRF 133
>gi|284122509|ref|ZP_06386855.1| PIN domain family protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829353|gb|EFC33749.1| PIN domain family protein [Candidatus Poribacteria sp. WGA-A3]
Length=143
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/135 (28%), Positives = 61/135 (46%), Gaps = 1/135 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M LD NVL+ AHR + H L P+ +P FLR+ T+ R+F P
Sbjct 1 MRALDTNVLIHAHRKEMAKHAEAGQLLRNLAEGTKPWGLPVFCLGEFLRVVTHHRVFTPP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC 120
+ A A ++ + P PG R+ + A+G+++ DA + A+ + H
Sbjct 61 TTIQNALAALDGLLQSPTVRLLLPGDRYWSCFHNAISQGQATGNVVFDAQIVAVCLEHGI 120
Query 121 A-VVSLDRDFARFAS 134
++S DR+ RF +
Sbjct 121 DFLISEDRELKRFEN 135
>gi|322435687|ref|YP_004217899.1| PIN domain protein family protein [Acidobacterium sp. MP5ACTX9]
gi|321163414|gb|ADW69119.1| PIN domain protein family protein [Acidobacterium sp. MP5ACTX9]
Length=143
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/141 (37%), Positives = 71/141 (51%), Gaps = 1/141 (0%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLA-ADDPFTVPNLVWASFLRLATNRRIFEI 59
M +LDAN+LL A+ H+ R + D + + + +P +FLRL TN +
Sbjct 1 MIVLDANLLLYAYTARSSFHQPARSYLDHIFSDTSESIGIPIQCATAFLRLITNPAVTGA 60
Query 60 PSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHH 119
+A A VE A PH PG H L+ + A+GDLI DA +AA A+ +
Sbjct 61 RIAMDDAIARVEEWQALPHVRILYPGEEHWQFLKTVTRNGHATGDLIADAAIAAFALEYG 120
Query 120 CAVVSLDRDFARFASVRHIRP 140
V S DRDFARF+S+R P
Sbjct 121 AVVHSNDRDFARFSSIRWHNP 141
>gi|167967876|ref|ZP_02550153.1| hypothetical protein MtubH3_07513 [Mycobacterium tuberculosis
H37Ra]
Length=123
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/124 (32%), Positives = 56/124 (46%), Gaps = 4/124 (3%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADD--PFTVPNLVWASFLRLATNRRIFE 58
M + D N+LL A P HR W+ + T P L FLR+AT+ R+
Sbjct 1 MIIPDINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALF--GFLRIATSARVLA 58
Query 59 IPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGH 118
P P A+A A+V +QP+ GPRHL + L D+ + L D LAA + +
Sbjct 59 APLPTADAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHLTTDVQLAAYGIEY 118
Query 119 HCAV 122
+
Sbjct 119 DAEI 122
>gi|258593476|emb|CBE69815.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=144
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/142 (31%), Positives = 65/142 (46%), Gaps = 2/142 (1%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
MF+ D NVL+ A D P HR + + + FLR+ T+ R+F P
Sbjct 1 MFVSDTNVLIYAADADSPFHRRCHARLQDWRGQTSAWYLTWGILYEFLRVTTHPRVFRQP 60
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEA-DASGDLIPDAVLAAIAVGHH 119
P A A+ F+EAV A P P RH ++ ++ E +G++I DA A + H
Sbjct 61 WPAARAWEFIEAVLASPGLSLLLPTDRHATVVAEVFGELPHLAGNVIHDAHTAILMREHG 120
Query 120 C-AVVSLDRDFARFASVRHIRP 140
+ + D DF RF + I P
Sbjct 121 IRRIYTRDTDFHRFPFLEPIDP 142
>gi|258593480|emb|CBE69819.1| Conserved membrane protein [NC10 bacterium 'Dutch sediment']
Length=144
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (28%), Positives = 62/140 (45%), Gaps = 1/140 (0%)
Query 2 FLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPS 61
+ +D NVLL A P H + + D F + ++LR+AT RIF P
Sbjct 3 YSVDVNVLLYASDTSSPKHPEAIRFMEERAFDPDLFCIAWSTLIAYLRIATYPRIFARPL 62
Query 62 PRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCA 121
++A VE++ + P + G L R + G+L+PDA LA + H
Sbjct 63 SPSDALGNVESLLSLPRVRTLSEGEDFLDGYRGVTAHFPVRGNLVPDAHLATLLQQHGVG 122
Query 122 -VVSLDRDFARFASVRHIRP 140
+ + DRDF +F + + P
Sbjct 123 RLYTADRDFRKFDFLEVVDP 142
>gi|340628670|ref|YP_004747122.1| hypothetical protein MCAN_37181 [Mycobacterium canettii CIPT
140010059]
gi|340006860|emb|CCC46049.1| putative conserved membrane protein [Mycobacterium canettii CIPT
140010059]
Length=145
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (29%), Positives = 61/140 (44%), Gaps = 2/140 (1%)
Query 4 LDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPR 63
D +VL+ A P H + +R LA + V +LR+ T+ + P
Sbjct 5 FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP 64
Query 64 AEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVV 123
A +E T++PH + R++ D G+L+PDA L A+ H A +
Sbjct 65 EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI 124
Query 124 -SLDRDFARFASVRHIRPPL 142
S DRDF +F +R IR P
Sbjct 125 WSHDRDFRKFEGIR-IRDPF 143
>gi|15610833|ref|NP_218214.1| hypothetical protein Rv3697c [Mycobacterium tuberculosis H37Rv]
gi|15843315|ref|NP_338352.1| hypothetical protein MT3799 [Mycobacterium tuberculosis CDC1551]
gi|148663560|ref|YP_001285083.1| hypothetical protein MRA_3732 [Mycobacterium tuberculosis H37Ra]
62 more sequence titles
Length=145
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (29%), Positives = 61/140 (44%), Gaps = 2/140 (1%)
Query 4 LDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPR 63
D +VL+ A P H + +R LA + V +LR+ T+ + P
Sbjct 5 FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP 64
Query 64 AEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVV 123
A +E T++PH + R++ D G+L+PDA L A+ H A +
Sbjct 65 EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI 124
Query 124 -SLDRDFARFASVRHIRPPL 142
S DRDF +F +R IR P
Sbjct 125 WSHDRDFRKFEGIR-IRDPF 143
>gi|31794868|ref|NP_857361.1| hypothetical protein Mb3723c [Mycobacterium bovis AF2122/97]
gi|121639611|ref|YP_979835.1| hypothetical protein BCG_3756c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224992107|ref|YP_002646796.1| hypothetical protein JTY_3757 [Mycobacterium bovis BCG str. Tokyo
172]
10 more sequence titles
Length=145
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/140 (29%), Positives = 61/140 (44%), Gaps = 2/140 (1%)
Query 4 LDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPR 63
D +VL+ A P H + +R LA + V +LR+ T+ + P
Sbjct 5 FDVDVLVHATHRASPFHDKAKTLVERFLARPGLVYLLWPVALGYLRVVTHPTLLGAPLAP 64
Query 64 AEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVV 123
A +E T++PH + R++ D G+L+PDA L A+ H A +
Sbjct 65 EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI 124
Query 124 -SLDRDFARFASVRHIRPPL 142
S DRDF +F +R IR P
Sbjct 125 WSHDRDFRKFEGIR-IRDPF 143
>gi|312622997|ref|YP_004024610.1| PilT protein domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203464|gb|ADQ46791.1| PilT protein domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length=132
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (25%), Positives = 65/137 (48%), Gaps = 14/137 (10%)
Query 1 MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP 60
M L+D +VL+ +G+ N + + F+ +L PF + +L++ L+ A N + FE+
Sbjct 1 MILVDTSVLIDFFKGN-TNEKVKK--FEWVLTNKIPFGITHLIYQEILQGAKNEKEFELL 57
Query 61 SPRAEAFAFVEAVTAQPHHLPTNPGPRH--LMLLRKLCDEADASGDLIPDAVLAAIAVGH 118
E ++ QP + T + LL C + + D ++A IA+ +
Sbjct 58 K---------EYLSTQPFYELTKGKKSYEEAALLYFKCKKRGINLKSTVDVIIAQIAIEN 108
Query 119 HCAVVSLDRDFARFASV 135
+ ++ DRD+++ A V
Sbjct 109 NLYLLHNDRDYSKIAKV 125
Lambda K H
0.328 0.140 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129798780480
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40